CsaV3_3G014520 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G014520
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Transcription termination factor like
Location	chr3 : 10836743 .. 10839592 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTCAGAAAGTTATTTTCGACCATTTCCCTTCAAAAACCCTAACCCTCTCTCTGTCTCCCACTCCGCCCATCGCCGATGCCCCGCCGCCCCCCATTTTTCTATTCTGTTCTCTCATAGCTTCATCCTCTTGTGAGGCATTGCTAGTTTCTCCCATTCTTCTTCTCAACAAGGAACCAACAGGTCTGTCTTCCTTCTCCTCCCACTTCTTACACTCATGTCTAACTTCTTTCGCACAATCCTTCTACTTAGATCTCCATCCTCACTCTTTTCTCACGGATTTTCCCAAAGTCCGTTCAAATCTCTCAGATACTTATCCACCTCTTCTGAGATTGTATCATCTCCCAAATCTGCTTCGTTGCCTTCTAATGCTGTTCAGCTCAATAATAATTCGAAGGCTGTAATTGGGTTACTTGCGAATCATGGATTCTCTGAATCACAAATCTCTGACCTTGCCAAGAGGTATCCTCAAATTATTTCTATGAACCCCGAGAAAATCCTATCGCCCAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCAGTTCCCTGTGTTTTAACAGGAAGTTTAAACAAACGAATTATTCCATCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCACTGCTATAAAGCGCTTTCCGGGTATTCTCGGTTGGGATCTTCGAACTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTCAAGTTATCTTCAGCGGCAGCCTAAAATGTTCTTAACAAGTTCCATCCGATTCAAGAAGGCTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATGAGAAGGTTGAAGGTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAAAATCCACGTTGTATGAGTGCTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGTGAACCATTTTTGGTTGCTAGAACACCAACTTTAGTTTCATATAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTACGTTTATCAAGTTTTGGTGTCAAAGTGTTTGATTAAGAAGTACGCGCATTTTGCTTTGTTTTTTAACTCTTCTGCAAACCTTTTCATAGACAAATTCATCAACCCTCATAAGGAGCAGATTCCTGAATTGTTGGAGTTGTATAAAGAGAAATTAATGGATTTAGAAGATGAACAGGTTCGATCTCCTTGAAATTTTAATGTTTAACTGTTTTGTTAGTTGATATGTGTAGTGAGAACTAAGATTTATATACATTCAAGAGTCTGTGTTTCTACATTATCACTTTTTTGCTATCTAAAATAGATATATATGTATATACAAGTATTAGAATCAAAGATTAACAATTTTTAAACCAACAATCATATATTTTTTTGGGTAGATTTTGGTCAATTTCAAACGCAATAAAATATGAGAGAGAAAAGAAAAGAAGGGAAAACAGCAGGGAAGAAGAAGAGAACGAGAGAAAAAGAATAAAGAGGGAAGAGAGAAGAACAAGCGTTGTGACGAGGAAATATACTATATTGTGAAGGGTTATGCTTTGTAAAAGGTTTGAATTGTTTAGTTTATTTGTTTTTCATAAAAGAGGGAGAGGAAGAGAAGATGAAGATGGATGGAGAGAAGAAAGAGATTTTCCTTTGTTAATTTTAGAATGTCTAATTATCTTAATTAAAAAAGAGGTTAATTGCAATTATTAACAAAGAATAAGAGACGTAACTGATAAAATAATATGAAATATTTCTTTGTTATTTTAAATAATTTATTTTAACTTAATTGTTTTTATAATGTTTTTCAAAACTACATTATGATAACTCTTAAAAATAAATGGAAAAATTTTGGGAAAATTTGTGAGGAGTAGCACACTTTTACTTTTACATATATTTTCAAAAGCTACTAAATTTGTTTATCTCGATCTATTTTGTCCCTCGACATTGCGATTCTTCTCAAATTTTAAAAAATCGTTTTTACATAATTTCTCTCTACATCGAGATTGTGAGCTTTTGTTTTAAAATTTCAATACTACTTGAAAAAAATAGACTCTCTTAATGTTTATGATTTAAATATTTGACCGTTTTTAGAAATAAAATATTAAAAAATTCGTGATTTCAAAGGTAAAATGTCCAAATTTTATGAAAAGGTCAATAACATCACTGATTTTATGAAAAGGCGGATATGGGTAATCTTTTGAAAAAAATTTAATGCTAGAACTTTTCTTGACATTTAAAAACGTCAAATAATATGTATTTTCTTTACGTTTTGCAAATGTCAAGAATTTTTATGAAAAGTAGGCGAATTTTCAAAATATTTTTCACATCCGAACATTTCTTGAAGACGTTTTTTTTTTAAAAAAAAGAGAACAACTCCTCCTCTAGTTTTTCACTTTCCATCTTTCAGGAACAAAGAAAGTCTCCATGAAGCCCCTACCACCCGAACGCCCATGGTGACCCATCCATCACGCCCAGTGACTTAGCACCCAGCGTTCACACACACCTTCAACTTCCGGCCACTCTTTCAATAATTGACACCAGGTTATTTTTTCTTCTTTTCTTTTCTTGTATTTTAGAATTTTTGTTTTGTTATTGCAATTAATTTTAACAGTTAGTTAATGGGTGTTGCATAATTGGTTTCTTCATATACTGAAATCCTTAATTCGTGTATTTAGTTGGTTGTAATGTGACGAACAACGGAAAATTCCAAGTTACGCCCATAAT

mRNA sequence

ATGTCTAACTTCTTTCGCACAATCCTTCTACTTAGATCTCCATCCTCACTCTTTTCTCACGGATTTTCCCAAAGTCCGTTCAAATCTCTCAGATACTTATCCACCTCTTCTGAGATTGTATCATCTCCCAAATCTGCTTCGTTGCCTTCTAATGCTGTTCAGCTCAATAATAATTCGAAGGCTGTAATTGGGTTACTTGCGAATCATGGATTCTCTGAATCACAAATCTCTGACCTTGCCAAGAGGTATCCTCAAATTATTTCTATGAACCCCGAGAAAATCCTATCGCCCAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCAGTTCCCTGTGTTTTAACAGGAAGTTTAAACAAACGAATTATTCCATCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCACTGCTATAAAGCGCTTTCCGGGTATTCTCGGTTGGGATCTTCGAACTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTCAAGTTATCTTCAGCGGCAGCCTAAAATGTTCTTAACAAGTTCCATCCGATTCAAGAAGGCTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATGAGAAGGTTGAAGGTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAAAATCCACGTTGTATGAGTGCTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGTGAACCATTTTTGGTTGCTAGAACACCAACTTTAGTTTCATATAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTACGTTTATCAAGTTTTGGTGTCAAAGTGTTTGATTAAGAAGTACGCGCATTTTGCTTTGTTTTTTAACTCTTCTGCAAACCTTTTCATAGACAAATTCATCAACCCTCATAAGGAGCAGATTCCTGAATTGTTGGAGTTGTATAAAGAGAAATTAATGGATTTAGAAGATGAACAGGAACAAAGAAAGTCTCCATGA

Coding sequence (CDS)

ATGTCTAACTTCTTTCGCACAATCCTTCTACTTAGATCTCCATCCTCACTCTTTTCTCACGGATTTTCCCAAAGTCCGTTCAAATCTCTCAGATACTTATCCACCTCTTCTGAGATTGTATCATCTCCCAAATCTGCTTCGTTGCCTTCTAATGCTGTTCAGCTCAATAATAATTCGAAGGCTGTAATTGGGTTACTTGCGAATCATGGATTCTCTGAATCACAAATCTCTGACCTTGCCAAGAGGTATCCTCAAATTATTTCTATGAACCCCGAGAAAATCCTATCGCCCAAATTGTTGTTTTTTCAATCTAAAGGTCTTTCTTCCCCAGAGATTGTCAAATTAGTATGTTCAGTTCCCTGTGTTTTAACAGGAAGTTTAAACAAACGAATTATTCCATCCTTTGATTACATTCAAGCCGTGCTTGGAAGTGAGGAGAAGACTCTCACTGCTATAAAGCGCTTTCCGGGTATTCTCGGTTGGGATCTTCGAACTTCAGTTGGTCCCAATATTGAAATTCTGAAACAAATTGGAGTGCCGGATTCAAATATTTCAAGTTATCTTCAGCGGCAGCCTAAAATGTTCTTAACAAGTTCCATCCGATTCAAGAAGGCTGTAGAGAGAGTTACGGAAATGGGATTCAACCCTCAACGATTGCAGTTTGTTGTTGCTGTTTTTGCTCTGCGATCAATGACCAAATCTACATGGGATGAGAAGGTTGAAGGTTATAGGAAATGGGGATTGTCTGAAGAAGAGATCCGTTTAGCTTTTAGAAAAAATCCACGTTGTATGAGTGCTTCTGAGGATAAGATTAATGGTGCAATGGATTTTTTTGTCAACAAAATGGGATGTGAACCATTTTTGGTTGCTAGAACACCAACTTTAGTTTCATATAGTTTGAAGAAGAGGATTTTGCCTAGAGGCTACGTTTATCAAGTTTTGGTGTCAAAGTGTTTGATTAAGAAGTACGCGCATTTTGCTTTGTTTTTTAACTCTTCTGCAAACCTTTTCATAGACAAATTCATCAACCCTCATAAGGAGCAGATTCCTGAATTGTTGGAGTTGTATAAAGAGAAATTAATGGATTTAGAAGATGAACAGGAACAAAGAAAGTCTCCATGA

Protein sequence

MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSKAVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVPCVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKVEGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSLKKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKLMDLEDEQEQRKSP

Homology

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BLAST of CsaV3_3G014520 vs. NCBI nr
Match: XP_011652765.1 (PREDICTED: uncharacterized protein LOC101204411 [Cucumis sativus])

HSP 1 Score: 644.0 bits (1660), Expect = 3.1e-181
Identity = 339/373 (90.88%), Postives = 339/373 (90.88%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK 60
           MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK
Sbjct: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSK               
Sbjct: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSK--------------- 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
                              AVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP
Sbjct: 121 -------------------AVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV
Sbjct: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL
Sbjct: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360
           KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL
Sbjct: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 339

Query: 361 MDLEDEQEQRKSP 374
           MDLEDEQEQRKSP
Sbjct: 361 MDLEDEQEQRKSP 339

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BLAST of CsaV3_3G014520 vs. NCBI nr
Match: XP_016898974.1 (PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo])

HSP 1 Score: 553.9 bits (1426), Expect = 4.2e-154
Identity = 282/362 (77.90%), Postives = 311/362 (85.91%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK 60
           MSN FR ILLLRSPSS FSHGFS+ P K LRYLSTSSEIVSSPKSASL SNAVQL NN K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           A++ LLANHGFSESQISD+ KR  +I+ +NPEKILSPKLLFFQSKGLSSPEIVKLVCS+P
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
           CVLTGSLNKRIIP+FDY+QAV GSEEKTL  IKRF GIL WDLR SVGPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNI  YLQ QP++FL + +RFK+AVERV EMGFNPQ+LQFVVAVF LR+MTKSTWD+KV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E YRKWGLSEEEIR+AFRK+P CM+ SEDKING MDFFVNK+GCE    AR P L+S SL
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360
           KKRILPRGY+YQVL+SK LIKK+ + A FF S    FI+KFINPH EQI  LLELY+EKL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360

Query: 361 MD 363
            D
Sbjct: 361 KD 362

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BLAST of CsaV3_3G014520 vs. NCBI nr
Match: XP_008439382.1 (PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo])

HSP 1 Score: 541.6 bits (1394), Expect = 2.1e-150
Identity = 284/363 (78.24%), Postives = 314/363 (86.50%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK 60
           MS  FR ILLLRSPSS+FSHGFS+SP KSLR+LSTSSEIVSSPKSASL SNAVQL NN K
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           AVI LLANHGFS+SQISD+ +R PQI++ NPEKIL PKLLFFQSKGLSSPEI KLVC+ P
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
            VLTGSLNKRII +FDYIQAVLGSEEKTL AIK+F GIL  DL+ SVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNI  YLQ QP++F+ SSIRFK+ VERVTEMGFNPQRLQF+VAVFALR+MTKSTWD+KV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E YRKWGLSEEEI LAF+++P CM  SEDKINGAMDFFVNK+GCE   VAR P L+S SL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHK-EQIPELLELYKEK 360
           KKR+ PRGYVYQVL+ K LIKK A+  LF +SS   FI+KFINPHK EQIP LLELYK+K
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 LMD 363
           LMD
Sbjct: 361 LMD 363

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BLAST of CsaV3_3G014520 vs. NCBI nr
Match: XP_004134480.2 (PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus])

HSP 1 Score: 533.9 bits (1374), Expect = 4.4e-148
Identity = 280/362 (77.35%), Postives = 307/362 (84.81%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK 60
           MS FFRT+LLLRSPSS+FSHGFS+SP KSL YLSTSSEIVSSP+SASL SNAVQL NN K
Sbjct: 1   MSIFFRTLLLLRSPSSVFSHGFSESPLKSLTYLSTSSEIVSSPESASLASNAVQLENNGK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           AVI LLANH FS+SQIS LA RYPQI+S NPEK L PKLLFFQSKGLSSPEI +LV S P
Sbjct: 61  AVIALLANHVFSQSQISYLANRYPQILSANPEKTLLPKLLFFQSKGLSSPEIFELVRSDP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
            VL  S+NKRIIP+FDYIQAVLGSEEKTL  IK+F GIL  DLR SVGPNIEILKQIGVP
Sbjct: 121 WVLGASINKRIIPAFDYIQAVLGSEEKTLATIKQFAGILSKDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DS+I  Y   QP++FLT+SIRFK+ VERV EMGFNPQ+ QFVVAVFALRSMTKSTWD+KV
Sbjct: 181 DSSILKYFPYQPRVFLTNSIRFKETVERVAEMGFNPQQTQFVVAVFALRSMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E  RKWGLSEE+IRLAFR+NP CM  SEDKINGAMDFFVNKMGCE    AR P L+S+SL
Sbjct: 241 EILRKWGLSEEDIRLAFRRNPWCMRVSEDKINGAMDFFVNKMGCESSFAARRPVLLSFSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360
           KKRILPRGYVYQVL+SK LIKK  +  LFF S    FI+K+INP KEQIPELLELYK+KL
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKNENLGLFFESPEKRFIEKYINPRKEQIPELLELYKQKL 360

Query: 361 MD 363
           M+
Sbjct: 361 ME 362

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BLAST of CsaV3_3G014520 vs. NCBI nr
Match: XP_004134483.2 (PREDICTED: uncharacterized protein LOC101210242 [Cucumis sativus])

HSP 1 Score: 532.7 bits (1371), Expect = 9.9e-148
Identity = 279/362 (77.07%), Postives = 311/362 (85.91%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK 60
           MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASL SNAVQL NN K
Sbjct: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLSSNAVQLENNGK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           A+I LL N GFS+SQISDLA R+P+I+SMNPEKIL PKLLF QSKGLSSPE+VK+VC+VP
Sbjct: 61  ALIALLENQGFSQSQISDLAMRFPRILSMNPEKILLPKLLFLQSKGLSSPEVVKIVCTVP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
              TGSLNKRIIP+FDYIQAVLG+EEKTL AIKRF G+L  DLR SVGPNIEILKQIGVP
Sbjct: 121 NFFTGSLNKRIIPAFDYIQAVLGTEEKTLNAIKRFAGVLVKDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNI  YLQ QP+ FL + IRFK+ VERVTEMGFN Q+LQF+VAVFALR+MTKSTWD+KV
Sbjct: 181 DSNILKYLQYQPRTFLINPIRFKEIVERVTEMGFNRQQLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E YRKWGLSEE+I  AFR++P CM  SEDKINGAMDFFVNKMGC+    A  P LVS S+
Sbjct: 241 EVYRKWGLSEEQICSAFRRHPWCMMGSEDKINGAMDFFVNKMGCKSSFAATRPILVSLSM 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360
           KKR+LPRG+VYQVLVSK LIK  A+F   F SS   FI+K+IN HKEQIP LLELY++KL
Sbjct: 301 KKRLLPRGHVYQVLVSKGLIKN-ANFTSLFCSSEKRFIEKYINLHKEQIPGLLELYEQKL 360

Query: 361 MD 363
           ++
Sbjct: 361 VE 361

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BLAST of CsaV3_3G014520 vs. TAIR10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 169.1 bits (427), Expect = 5.2e-42
Identity = 105/331 (31.72%), Postives = 166/331 (50.15%), Query Frame = 0


Query: 29  SLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK--AVIGLLANHGFSESQISDLAKRYPQI 88
           +L YL  S  +  SP SA++ S  + L++  +   V+ LL +HGF+ +QIS L K+ P +
Sbjct: 71  TLNYLIDSCGL--SPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 89  ISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVPCVLTGSLNKRIIPSFDYIQAVLGSEE 148
           +  N E +L PKL FF S G+S   + + + S                            
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASXXXXXXXXXXXXXXXXXXXXXXXXXXXX 190

Query: 149 KTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKKAV 208
                                      + + GVP+  I   L   P+  +  +  F+   
Sbjct: 191 XXXXXXXXXXXXXXXXXXXXXXXXXXXMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 209 ERVTEMGFNPQRLQFVVAVFALRSM-TKSTWDEKVEGYRKWGLSEEEIRLAFRKNPRCMS 268
           ++  EMGFNPQ+  FV+A+ AL     KS WD+  E Y++WG SE++I  AF+K+P CM 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 269 ASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSLKKRILPRGYVYQVLVSKCLIKKYAH 328
            SE KIN  M++FVN+M   P  +A+ P ++ +SL+KRI+PR  V +VLVS  L+K+   
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 329 FALFFNSSANLFIDKFINPHKEQIPELLELY 357
                     +F++K +  ++E++PEL+ LY
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

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BLAST of CsaV3_3G014520 vs. TAIR10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 159.5 bits (402), Expect = 4.1e-39
Identity = 97/305 (31.80%), Postives = 171/305 (56.07%), Query Frame = 0


Query: 60  KAVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSV 119
           ++VI +L ++ FS++QI    + +P+++  N EKIL PKL FF+  G +   + K V   
Sbjct: 72  RSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQN 131

Query: 120 PCVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPG--ILGWDLRTSVGPNIEILKQI 179
             V+  SL K++IP+ + +++++  + + L  I    G  +L  D    + PNI  L+  
Sbjct: 132 SSVVGVSLVKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETC 191

Query: 180 GVPDSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWD 239
           G+  S ++S L+RQP++F  S  + +  V R  ++GF       V AV +L S+++ T+D
Sbjct: 192 GIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFD 251

Query: 240 EKVEGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVS 299
            KV+ +   G SE+EI    R++P  +  SEDK+    +F++ +MG E   +A+ P ++S
Sbjct: 252 RKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLS 311

Query: 300 YSLKKRILPRGYVYQVLVSKCLI----KKYAHFALFFNSSANLFIDKFINPHKEQI-PEL 358
           Y+L+KR++PR  V Q+L  K L+    KK  +       +   F++K++    ++I  EL
Sbjct: 312 YNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEEL 371

[Close]

BLAST of CsaV3_3G014520 vs. TAIR10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 158.7 bits (400), Expect = 7.1e-39
Identity = 88/316 (27.85%), Postives = 170/316 (53.80%), Query Frame = 0


Query: 42  SPKSASLPSNAVQLNNNSK--AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKL 101
           S +SA   S  V+L ++ K  +V+ L  +HGF+  QI+ + K +P+++S++PE ++SPK 
Sbjct: 69  SLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKX 128

Query: 102 LFFQSKGLSSPEIVKLVCSVPCVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGIL 161
                                       +KR+IP +D ++++L  EE  +  +KR     
Sbjct: 129 XXXXXXXXXXXXXXXXXXXXXXXXXXXXHKRLIPCYDSLKSILVEEESVVKCLKRGIRCF 188

Query: 162 GWDLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRL 221
              +   V   + I +++GVPD +I   +Q  P  F +   RF + + RV   GF+P++ 
Sbjct: 189 SLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKA 248

Query: 222 QFVVAVFALRSMTKSTWDEKVEGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFV 281
            FV A+ A    ++S  + K + ++ +G S+E+   A  + P C++ S++KI   +++ V
Sbjct: 249 GFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLV 308

Query: 282 NKMGCEPFLVARTPTLVSYSLKKRILPRGYVYQVLVSKCLIKKY-AHFALFFNSSANLFI 341
           N +G +   +   P ++S S++KRI PR  V  +L+SK L+KK   ++       ++ F+
Sbjct: 309 NNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFM 368

Query: 342 DKFINPHKEQIPELLE 355
           DKF+  +++++P+L++
Sbjct: 369 DKFVLKYQDEMPQLVQ 384

[Close]

BLAST of CsaV3_3G014520 vs. TAIR10
Match: AT1G61990.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-26
Identity = 86/339 (25.37%), Postives = 164/339 (48.38%), Query Frame = 0


Query: 58  NSKAVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVC 117
           N  +V+ L  ++GF++SQIS +   YP ++  + +K L  KL   QS+G SS EI ++V 
Sbjct: 83  NPDSVLSLFRSYGFTDSQISTIITDYPLLLVADAKKALGRKLQILQSRGASSSEITEIVS 142

Query: 118 SVPCVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQI 177
           +VP +L     K I   +D ++ ++ ++  T ++ +   G  G  +R     N+  L+++
Sbjct: 143 TVPRILG---KKSITVYYDAVKDIIVAD--TSSSYELPQGSQGNKIR-----NVSALREL 202

Query: 178 GVPDSNISSYL--QRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKST 237
           G+P   +   L  + QP   +     F  ++++V EMGF+P   +FV+A+  L  M++ T
Sbjct: 203 GMPSRLLLPLLVSKSQP---VCGKENFDASLKKVVEMGFDPTTTKFVLALRMLYQMSEKT 262

Query: 238 WDEKVEGYRKWGLSEEEIRLAFRKNPR--------------------------------- 297
            +EKV  +R  G + +++   F+K P                                  
Sbjct: 263 IEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRAEFLMMVKRY 322

Query: 298 --CMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSLKKRILPRGYVYQVLVSKCLI 357
             C+  S + +    +F V KM      +   P +  YS++KRI+PR  + + L+SK L+
Sbjct: 323 PPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNILEALLSKGLL 382

[Close]

BLAST of CsaV3_3G014520 vs. TAIR10
Match: AT1G62120.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 114.8 bits (286), Expect = 1.2e-25
Identity = 88/364 (24.18%), Postives = 175/364 (48.08%), Query Frame = 0


Query: 44  KSASLPSNAVQLNN--NSKAVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLF 103
           K A   S  V  +N  N  +V+ LL +HGF++SQIS++ + +P+++ ++ EK L+PKL F
Sbjct: 71  KVAESISMKVSFDNKGNPDSVLSLLRSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQF 130

Query: 104 FQSKGLSSPEIVKLVCSVPCVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGW 163
            QS G SS E+ + V +VP +L     K +   +D+++ ++   +K+    K    +   
Sbjct: 131 LQSIGASSSELTETVSAVPKILGKRKGKSLSRYYDFVKVII-EADKSSKLEKLCHSLPEG 190

Query: 164 DLRTSVGPNIEILKQIGVPDSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQF 223
             + +   N+ +L+++GVP   + S L       +    +FK+++++  E+GF+P    F
Sbjct: 191 SKQENKIRNLLVLREMGVPQRLLFSLLISDAG-DVCGKEKFKESLKKAVEIGFDPTTATF 250

Query: 224 VVAVFALRSMTKSTWDEKVEGYRKWGLSEEEIRLAFRKNPRCMS---------------- 283
           V A+  L  ++    + K    ++ GL+ +++   F+K P  ++                
Sbjct: 251 VKALNVLYGLSDKGIENKFNACKRLGLAVDDVWAMFKKWPNILTKXXXXXXXXXXXXXXX 310

Query: 284 -------------------ASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSLKKRILP 343
                                   +    +F V +M      VA  P ++ YSL+KR +P
Sbjct: 311 XXXXXXXXXXXXXXXXXXXXXXXXMKTKTEFLVTEMNWPLKAVASIPQVLGYSLEKRTVP 370

Query: 344 RGYVYQVLVSKCLIK-KYAHFALFFNSSANLFIDKFINPH--KEQIPELLELYKEKLMDL 368
           R  V +VL+SK L++ +    +    S++ +F+  ++  H  K+ + EL+ ++    + L
Sbjct: 371 RCNVIKVLISKGLLESELPPISSVLTSTSEVFLYMYVRKHDDKQLVAELMAIFTGDRVSL 430

[Close]

BLAST of CsaV3_3G014520 vs. TrEMBL
Match: tr|A0A1S4DSL1|A0A1S4DSL1_CUCME (uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=4 SV=1)

HSP 1 Score: 553.9 bits (1426), Expect = 2.7e-154
Identity = 282/362 (77.90%), Postives = 311/362 (85.91%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK 60
           MSN FR ILLLRSPSS FSHGFS+ P K LRYLSTSSEIVSSPKSASL SNAVQL NN K
Sbjct: 1   MSNLFRRILLLRSPSSAFSHGFSECPLKFLRYLSTSSEIVSSPKSASLASNAVQLKNNPK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           A++ LLANHGFSESQISD+ KR  +I+ +NPEKILSPKLLFFQSKGLSSPEIVKLVCS+P
Sbjct: 61  ALVALLANHGFSESQISDITKRQSKILCLNPEKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
           CVLTGSLNKRIIP+FDY+QAV GSEEKTL  IKRF GIL WDLR SVGPNIEILKQIGVP
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVFGSEEKTLITIKRFAGILAWDLRISVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNI  YLQ QP++FL + +RFK+AVERV EMGFNPQ+LQFVVAVF LR+MTKSTWD+KV
Sbjct: 181 DSNIFKYLQYQPRVFLINPVRFKEAVERVKEMGFNPQQLQFVVAVFILRAMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E YRKWGLSEEEIR+AFRK+P CM+ SEDKING MDFFVNK+GCE    AR P L+S SL
Sbjct: 241 EVYRKWGLSEEEIRIAFRKSPLCMAFSEDKINGVMDFFVNKLGCESSFAARRPILLSLSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360
           KKRILPRGY+YQVL+SK LIKK+ + A FF S    FI+KFINPH EQI  LLELY+EKL
Sbjct: 301 KKRILPRGYIYQVLLSKGLIKKHENLAWFFESPEKRFIEKFINPHTEQISGLLELYEEKL 360

Query: 361 MD 363
            D
Sbjct: 361 KD 362

[Close]

BLAST of CsaV3_3G014520 vs. TrEMBL
Match: tr|A0A1S3AYM0|A0A1S3AYM0_CUCME (uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 1.4e-150
Identity = 284/363 (78.24%), Postives = 314/363 (86.50%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK 60
           MS  FR ILLLRSPSS+FSHGFS+SP KSLR+LSTSSEIVSSPKSASL SNAVQL NN K
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSESPLKSLRFLSTSSEIVSSPKSASLASNAVQLENNRK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           AVI LLANHGFS+SQISD+ +R PQI++ NPEKIL PKLLFFQSKGLSSPEI KLVC+ P
Sbjct: 61  AVIELLANHGFSQSQISDIGRRRPQILAANPEKILLPKLLFFQSKGLSSPEIAKLVCTFP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
            VLTGSLNKRII +FDYIQAVLGSEEKTL AIK+F GIL  DL+ SVGPNIEILKQIGVP
Sbjct: 121 YVLTGSLNKRIIYNFDYIQAVLGSEEKTLAAIKQFAGILARDLQISVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNI  YLQ QP++F+ SSIRFK+ VERVTEMGFNPQRLQF+VAVFALR+MTKSTWD+KV
Sbjct: 181 DSNILKYLQYQPRVFIISSIRFKEIVERVTEMGFNPQRLQFLVAVFALRAMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E YRKWGLSEEEI LAF+++P CM  SEDKINGAMDFFVNK+GCE   VAR P L+S SL
Sbjct: 241 EVYRKWGLSEEEICLAFKRHPWCMMVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHK-EQIPELLELYKEK 360
           KKR+ PRGYVYQVL+ K LIKK A+  LF +SS   FI+KFINPHK EQIP LLELYK+K
Sbjct: 301 KKRLNPRGYVYQVLLEKGLIKKQANIPLFVSSSEKRFIEKFINPHKEEQIPGLLELYKQK 360

Query: 361 LMD 363
           LMD
Sbjct: 361 LMD 363

[Close]

BLAST of CsaV3_3G014520 vs. TrEMBL
Match: tr|A0A1S4DSL0|A0A1S4DSL0_CUCME (uncharacterized protein LOC103483824 OS=Cucumis melo OX=3656 GN=LOC103483824 PE=4 SV=1)

HSP 1 Score: 528.5 bits (1360), Expect = 1.2e-146
Identity = 277/362 (76.52%), Postives = 305/362 (84.25%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK 60
           MS  FR ILLLRSPSS+FSHGFS+   KSLR+LSTSSEIVSSPKSASL SNA        
Sbjct: 1   MSYLFRRILLLRSPSSVFSHGFSECSLKSLRFLSTSSEIVSSPKSASLASNA-------- 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           A++ LLANHGFSESQISD+AKR  +I+S+NP+KILSPKLLFFQSKGLSSPEIVKLVCS+P
Sbjct: 61  ALVALLANHGFSESQISDIAKRQCKILSLNPQKILSPKLLFFQSKGLSSPEIVKLVCSIP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
           CVLTGSLNKRIIP+FDY+QAVLGSEEKTL  IK+F GIL  DLR SVGPNIEILKQIGV 
Sbjct: 121 CVLTGSLNKRIIPNFDYLQAVLGSEEKTLATIKKFAGILIKDLRISVGPNIEILKQIGVQ 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNI  YLQ QP+MFL +SIRFK+ VERVTEMGFNP RLQFVVAVFALRSMTKSTWD+KV
Sbjct: 181 DSNILKYLQYQPRMFLINSIRFKEVVERVTEMGFNPDRLQFVVAVFALRSMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E YRKWGLSEEE  LAFR+NP CM+ SEDKIN  MDFFVNK+G E    AR P L+SYSL
Sbjct: 241 EVYRKWGLSEEEFSLAFRRNPLCMAFSEDKINAVMDFFVNKIGWESSFFARRPALISYSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360
           KKRILPRGYVYQVL+SK LIKK+    LFF  +   FI+K INPHKEQIP LLELYK+K+
Sbjct: 301 KKRILPRGYVYQVLLSKGLIKKHKSHFLFFECTEKRFIEKIINPHKEQIPGLLELYKQKV 354

Query: 361 MD 363
           MD
Sbjct: 361 MD 354

[Close]

BLAST of CsaV3_3G014520 vs. TrEMBL
Match: tr|A0A1S4DSP1|A0A1S4DSP1_CUCME (uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 9.2e-142
Identity = 271/362 (74.86%), Postives = 298/362 (82.32%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK 60
           MSN FR ILLLRSPS +F  GFSQSP KSLRYLSTSSEIVSSP+SA L SNAVQL  N K
Sbjct: 1   MSNLFRRILLLRSPSPVFPQGFSQSPLKSLRYLSTSSEIVSSPESAPLASNAVQLKTNRK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
           AVI  LA++GFSESQIS   KR+PQI+S NPEKIL PKLLFFQSKGLSSPEIVKLVCS P
Sbjct: 61  AVIAFLADYGFSESQISSFHKRFPQILSANPEKILLPKLLFFQSKGLSSPEIVKLVCSNP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
             L  SLNKRIIP+FDYIQAVLGS EK L  IK F  IL  DL  SVGPNIEILKQIGVP
Sbjct: 121 WCLAASLNKRIIPAFDYIQAVLGS-EKALATIKHFASILVRDLGISVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
           DSNI  YLQ QP++FL +SIRFK+ VERVTEMGFNPQ+LQFVVAVFALR+MTKSTWD+KV
Sbjct: 181 DSNILKYLQYQPRVFLINSIRFKEIVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E YRKWGLSEEEIRL F+++P CM  SEDKINGAMDFFVNK+GCE   VAR P L+S SL
Sbjct: 241 EVYRKWGLSEEEIRLVFKRHPWCMVVSEDKINGAMDFFVNKIGCESSFVARRPALISLSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360
           KKR+ PRGYVYQVL++K LIKK+ +   FF      FI+K INPHKEQIP LLELY++KL
Sbjct: 301 KKRLNPRGYVYQVLLAKGLIKKHQNLVSFFEFPEKRFIEKIINPHKEQIPVLLELYEKKL 360

Query: 361 MD 363
           MD
Sbjct: 361 MD 361

[Close]

BLAST of CsaV3_3G014520 vs. TrEMBL
Match: tr|A0A1S3AYN7|A0A1S3AYN7_CUCME (uncharacterized protein LOC103484196 OS=Cucumis melo OX=3656 GN=LOC103484196 PE=4 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 1.5e-136
Identity = 262/362 (72.38%), Postives = 291/362 (80.39%), Query Frame = 0


Query: 1   MSNFFRTILLLRSPSSLFSHGFSQSPFKSLRYLSTSSEIVSSPKSASLPSNAVQLNNNSK 60
           MSN FR ILLLRS S +FS GFS SP KSLRYLSTSSEIVSSP+SA L SNAVQ  N  K
Sbjct: 1   MSNLFRRILLLRSASPVFSQGFSGSPLKSLRYLSTSSEIVSSPESAPLASNAVQHKNKRK 60

Query: 61  AVIGLLANHGFSESQISDLAKRYPQIISMNPEKILSPKLLFFQSKGLSSPEIVKLVCSVP 120
            VI LLA+HGFS+SQIS L K++P++   NPEK L PKLLFF+SKGLSSPEI KLVCS P
Sbjct: 61  DVIALLADHGFSQSQISGLDKKFPKVFFSNPEKTLLPKLLFFRSKGLSSPEIAKLVCSFP 120

Query: 121 CVLTGSLNKRIIPSFDYIQAVLGSEEKTLTAIKRFPGILGWDLRTSVGPNIEILKQIGVP 180
            VL  SLNKRIIP+FDYIQAV GSEE +L AIKRF GIL  DL  SVGPNIEILKQIGVP
Sbjct: 121 YVLNASLNKRIIPAFDYIQAVFGSEEDSLNAIKRFSGILMKDLGISVGPNIEILKQIGVP 180

Query: 181 DSNISSYLQRQPKMFLTSSIRFKKAVERVTEMGFNPQRLQFVVAVFALRSMTKSTWDEKV 240
            SNI  YLQ QP+MFL + IRFK++VERVTEMGFNPQ+LQFVVAVFALR+MTKSTWD+KV
Sbjct: 181 GSNIFKYLQYQPRMFLANPIRFKESVERVTEMGFNPQQLQFVVAVFALRAMTKSTWDKKV 240

Query: 241 EGYRKWGLSEEEIRLAFRKNPRCMSASEDKINGAMDFFVNKMGCEPFLVARTPTLVSYSL 300
           E YRKWGLSEEEI LAFR+ P CM+ SED IN  MDFF+N+MGCE   VAR PTL   SL
Sbjct: 241 EVYRKWGLSEEEICLAFRRYPMCMALSEDNINDTMDFFINEMGCESSYVARRPTLFGCSL 300

Query: 301 KKRILPRGYVYQVLVSKCLIKKYAHFALFFNSSANLFIDKFINPHKEQIPELLELYKEKL 360
           KKRILPRG+VYQVL+SK  IK+    +  F  +   FI+KFINPHK QIP LLELY+EKL
Sbjct: 301 KKRILPRGFVYQVLLSKGFIKELQKVSFMFLCTEKRFIEKFINPHKGQIPGLLELYEEKL 360

Query: 361 MD 363
           MD
Sbjct: 361 MD 362

The following BLAST results are available for this feature:

BLAST of CsaV3_3G014520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652765.1	3.1e-181	90.88	PREDICTED: uncharacterized protein LOC101204411 [Cucumis sativus]	[more]
XP_016898974.1	4.2e-154	77.90	PREDICTED: uncharacterized protein LOC103483826 [Cucumis melo]	[more]
XP_008439382.1	2.1e-150	78.24	PREDICTED: uncharacterized protein LOC103484197 [Cucumis melo]	[more]
XP_004134480.2	4.4e-148	77.35	PREDICTED: uncharacterized protein LOC101209260 [Cucumis sativus]	[more]
XP_004134483.2	9.9e-148	77.07	PREDICTED: uncharacterized protein LOC101210242 [Cucumis sativus]	[more]

BLAST of CsaV3_3G014520 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07900.1	5.2e-42	31.72	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	4.1e-39	31.80	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	7.1e-39	27.85	Mitochondrial transcription termination factor family protein	[more]
AT1G61990.1	1.1e-26	25.37	Mitochondrial transcription termination factor family protein	[more]
AT1G62120.1	1.2e-25	24.18	Mitochondrial transcription termination factor family protein	[more]

BLAST of CsaV3_3G014520 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G014520 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DSL1\|A0A1S4DSL1_CUCME	2.7e-154	77.90	uncharacterized protein LOC103483826 OS=Cucumis melo OX=3656 GN=LOC103483826 PE=...	[more]
tr\|A0A1S3AYM0\|A0A1S3AYM0_CUCME	1.4e-150	78.24	uncharacterized protein LOC103484197 OS=Cucumis melo OX=3656 GN=LOC103484197 PE=...	[more]
tr\|A0A1S4DSL0\|A0A1S4DSL0_CUCME	1.2e-146	76.52	uncharacterized protein LOC103483824 OS=Cucumis melo OX=3656 GN=LOC103483824 PE=...	[more]
tr\|A0A1S4DSP1\|A0A1S4DSP1_CUCME	9.2e-142	74.86	uncharacterized protein LOC107990398 OS=Cucumis melo OX=3656 GN=LOC107990398 PE=...	[more]
tr\|A0A1S3AYN7\|A0A1S3AYN7_CUCME	1.5e-136	72.38	uncharacterized protein LOC103484196 OS=Cucumis melo OX=3656 GN=LOC103484196 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR038538	MTERF_sf
IPR003690	MTERF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003690	double-stranded DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G014520.1	CsaV3_3G014520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 346..366
None	No IPR available	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 39..365
None	No IPR available	PANTHER	PTHR13068:SF45	SUBFAMILY NOT NAMED	coord: 39..365
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 77..108 e-value: 0.0012 score: 28.1 coord: 254..285 e-value: 0.48 score: 19.5 coord: 113..145 e-value: 0.55 score: 19.3 coord: 149..180 e-value: 11.0 score: 14.9 coord: 286..321 e-value: 41.0 score: 13.1 coord: 185..215 e-value: 730.0 score: 5.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 185..320 e-value: 1.2E-15 score: 57.2 coord: 64..223 e-value: 2.7E-23 score: 82.3
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	G3DSA:1.25.70.10		coord: 35..229 e-value: 9.1E-25 score: 89.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G014520	Cucumber (Chinese Long) v3	cuccucB150
CsaV3_3G014520	Silver-seed gourd	carcucB0079
CsaV3_3G014520	Silver-seed gourd	carcucB0640
CsaV3_3G014520	Silver-seed gourd	carcucB0741
CsaV3_3G014520	Silver-seed gourd	carcucB0878
CsaV3_3G014520	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G014520	Cucumber (Gy14) v2	cgybcucB279
CsaV3_3G014520	Cucumber (Gy14) v1	cgycucB274
CsaV3_3G014520	Cucumber (Gy14) v1	cgycucB387
CsaV3_3G014520	Cucurbita maxima (Rimu)	cmacucB0291
CsaV3_3G014520	Cucurbita maxima (Rimu)	cmacucB0425
CsaV3_3G014520	Cucurbita maxima (Rimu)	cmacucB0433
CsaV3_3G014520	Cucurbita maxima (Rimu)	cmacucB0965
CsaV3_3G014520	Cucurbita maxima (Rimu)	cmacucB1049
CsaV3_3G014520	Cucurbita moschata (Rifu)	cmocucB0283
CsaV3_3G014520	Cucurbita moschata (Rifu)	cmocucB0420
CsaV3_3G014520	Cucurbita moschata (Rifu)	cmocucB0428
CsaV3_3G014520	Cucurbita moschata (Rifu)	cmocucB0953
CsaV3_3G014520	Cucurbita moschata (Rifu)	cmocucB1032
CsaV3_3G014520	Cucurbita pepo (Zucchini)	cpecucB0154
CsaV3_3G014520	Cucurbita pepo (Zucchini)	cpecucB0379
CsaV3_3G014520	Cucurbita pepo (Zucchini)	cpecucB0759
CsaV3_3G014520	Cucurbita pepo (Zucchini)	cpecucB1056
CsaV3_3G014520	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G014520	Wild cucumber (PI 183967)	cpicucB345
CsaV3_3G014520	Bottle gourd (USVL1VR-Ls)	cuclsiB163
CsaV3_3G014520	Bottle gourd (USVL1VR-Ls)	cuclsiB218
CsaV3_3G014520	Melon (DHL92) v3.5.1	cucmeB176
CsaV3_3G014520	Melon (DHL92) v3.5.1	cucmeB236
CsaV3_3G014520	Melon (DHL92) v3.6.1	cucmedB167
CsaV3_3G014520	Melon (DHL92) v3.6.1	cucmedB230
CsaV3_3G014520	Watermelon (Charleston Gray)	cucwcgB225
CsaV3_3G014520	Watermelon (Charleston Gray)	cucwcgB254
CsaV3_3G014520	Watermelon (97103) v1	cucwmB239
CsaV3_3G014520	Watermelon (97103) v1	cucwmB288
CsaV3_3G014520	Watermelon (97103) v2	cucwmbB206
CsaV3_3G014520	Watermelon (97103) v2	cucwmbB233
CsaV3_3G014520	Wax gourd	cucwgoB262
CsaV3_3G014520	Wax gourd	cucwgoB272