CsaV3_3G013550 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G013550
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 10225583 .. 10225936 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAATAACATTCATCAATTCATAGGAGAAATAATTAAAATCTCTGTTAAAAGAGATGAAAAAGAAAAAAACAATGTGGACAAAAATGCATAATATCATGGAAGTGGTTCAATAAAAAGCACTGGAAACAAAACAAAATCATACACAATCATATAGGTTCTAATGATATAATATTAAATATAAAAAAAGAAAACGTGAAAATGAATATTAATCTCCGACAGTCGGTCAAGCAAAAGGTTCTAATGATGTGGGAGTGGCTTTTGCGTCAGAAGATGAAAGATGAGCGGTTTCAGAGTGGCTCCGCACCACCAACTGCTGACTACGCCCACCCACTTGGTCAATTTTTGGCTCCTCAA

mRNA sequence

ATGAATATTAATCTCCGACAGTCGGTCAAGCAAAAGGTTCTAATGATGTGGGAGTGGCTTTTGCGTCAGAAGATGAAAGATGAGCGGTTTCAGAGTGGCTCCGCACCACCAACTGCTGACTACGCCCACCCACTTGGTCAATTTTTGGCTCCTCAA

Coding sequence (CDS)

ATGAATATTAATCTCCGACAGTCGGTCAAGCAAAAGGTTCTAATGATGTGGGAGTGGCTTTTGCGTCAGAAGATGAAAGATGAGCGGTTTCAGAGTGGCTCCGCACCACCAACTGCTGACTACGCCCACCCACTTGGTCAATTTTTGGCTCCTCAA

Protein sequence

MNINLRQSVKQKVLMMWEWLLRQKMKDERFQSGSAPPTADYAHPLGQFLAPQ
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G013550.1CsaV3_3G013550.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..52

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G013550Silver-seed gourdcarcucB0078
CsaV3_3G013550Silver-seed gourdcarcucB0254
CsaV3_3G013550Silver-seed gourdcarcucB0355
CsaV3_3G013550Silver-seed gourdcarcucB0640
CsaV3_3G013550Cucumber (Gy14) v2cgybcucB117
CsaV3_3G013550Cucumber (Gy14) v1cgycucB387
CsaV3_3G013550Cucurbita maxima (Rimu)cmacucB0007
CsaV3_3G013550Cucurbita maxima (Rimu)cmacucB0291
CsaV3_3G013550Cucurbita maxima (Rimu)cmacucB0425
CsaV3_3G013550Cucurbita maxima (Rimu)cmacucB0431
CsaV3_3G013550Cucurbita maxima (Rimu)cmacucB0965
CsaV3_3G013550Cucurbita maxima (Rimu)cmacucB1051
CsaV3_3G013550Cucurbita maxima (Rimu)cmacucB1049
CsaV3_3G013550Cucurbita moschata (Rifu)cmocucB0283
CsaV3_3G013550Cucurbita moschata (Rifu)cmocucB0420
CsaV3_3G013550Cucurbita moschata (Rifu)cmocucB0426
CsaV3_3G013550Cucurbita moschata (Rifu)cmocucB0953
CsaV3_3G013550Cucurbita moschata (Rifu)cmocucB1032
CsaV3_3G013550Cucurbita moschata (Rifu)cmocucB1035
CsaV3_3G013550Cucurbita pepo (Zucchini)cpecucB0154
CsaV3_3G013550Cucurbita pepo (Zucchini)cpecucB0159
CsaV3_3G013550Cucurbita pepo (Zucchini)cpecucB0385
CsaV3_3G013550Cucurbita pepo (Zucchini)cpecucB0388
CsaV3_3G013550Cucurbita pepo (Zucchini)cpecucB0759
CsaV3_3G013550Cucurbita pepo (Zucchini)cpecucB1056
CsaV3_3G013550Wild cucumber (PI 183967)cpicucB144
CsaV3_3G013550Bottle gourd (USVL1VR-Ls)cuclsiB163
CsaV3_3G013550Bottle gourd (USVL1VR-Ls)cuclsiB189
CsaV3_3G013550Bottle gourd (USVL1VR-Ls)cuclsiB218
CsaV3_3G013550Melon (DHL92) v3.5.1cucmeB187
CsaV3_3G013550Melon (DHL92) v3.5.1cucmeB236
CsaV3_3G013550Melon (DHL92) v3.6.1cucmedB179
CsaV3_3G013550Melon (DHL92) v3.6.1cucmedB230
CsaV3_3G013550Watermelon (Charleston Gray)cucwcgB189
CsaV3_3G013550Watermelon (Charleston Gray)cucwcgB225
CsaV3_3G013550Watermelon (Charleston Gray)cucwcgB254
CsaV3_3G013550Watermelon (97103) v1cucwmB200
CsaV3_3G013550Watermelon (97103) v1cucwmB239
CsaV3_3G013550Watermelon (97103) v1cucwmB288
CsaV3_3G013550Watermelon (97103) v2cucwmbB206
CsaV3_3G013550Watermelon (97103) v2cucwmbB233
CsaV3_3G013550Wax gourdcucwgoB261
CsaV3_3G013550Wax gourdcucwgoB272