CsaV3_3G010970 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_3G010970
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionCysteine Protease
Locationchr3 : 8688879 .. 8689485 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GATGGTTTGCCCAAGAAAGTGGATTGGGTTGAGAGCGCTGTTGTTACTCCGCCAAGAGATCAAGGACCCTCTCCAACTTGTTGGGCATATAGTGGAGTAGCAGCAATAGAATCGATGAATAAAATAAAAAGAGGGCAATTAGTTAACCTGACCGTTGTTGATGTTATTATTGACAACATACGGTTTTGGATGGATGGAGCATGGCCGGACGTTGTATTTCATGATGGAGTAAAGCAAGGCATTCGCAAGCTCAAAAGAAAGGATGTATGTTTTTTTTTTGTTTTTGTTTTTAAAATTTATTTATCCAATATTTATATTTATATATTTATTTATAGAGGTGGTAAGGATAGATGACTACAACATTGTACGTCCAAGTGAGTGGGCTTTAAAGTCCTTGTTAAGCAAACACCCAGTTTGTATCAGCATTTCTGTTGATGAATATGGTATGTATAGAAATTACAGAGGCAGACTTTACTATGGTCCGTTGGGAGAAATAGCAAATCATTCCATGTTAGCAGTAGGGTATAGTAAAGACTACTTGCTGCTCAAAAACTCATGGGGATGTATCTGGGGAGAAAATGGATATTGCAGAATCGCCACTCAACAA

mRNA sequence

GATGGTTTGCCCAAGAAAGTGGATTGGGTTGAGAGCGCTGTTGTTACTCCGCCAAGAGATCAAGGACCCTCTCCAACTTGTTGGGCATATAGTGGAGTAGCAGCAATAGAATCGATGAATAAAATAAAAAGAGGGCAATTAGTTAACCTGACCGTTGTTGATGTTATTATTGACAACATACGGTTTTGGATGGATGGAGCATGGCCGGACGTTGGTATAGTAAAGACTACTTGCTGCTCAAAAACTCATGGGGATGTATCTGGGGAGAAAATGGATATTGCAGAATCGCCACTCAACAA

Coding sequence (CDS)

GATGGTTTGCCCAAGAAAGTGGATTGGGTTGAGAGCGCTGTTGTTACTCCGCCAAGAGATCAAGGACCCTCTCCAACTTGTTGGGCATATAGTGGAGTAGCAGCAATAGAATCGATGAATAAAATAAAAAGAGGGCAATTAGTTAACCTGACCGTTGTTGATGTTATTATTGACAACATACGGTTTTGGATGGATGGAGCATGGCCGGACGTTGGTATAGTAAAGACTACTTGCTGCTCAAAAACTCATGGGGATGTATCTGGGGAGAAAATGGATATTGCAGAATCGCCACTCAACAA

Protein sequence

DGLPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVIIDNIRFWMDGAWPDVGIVKTTCCSKTHGDVSGEKMDIAESPLNX
Homology
[Close]
BLAST of CsaV3_3G010970 vs. NCBI nr
Match: KGN56737.1 (hypothetical protein Csa_3G131900 [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 2.4e-32
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0 

Query: 1  DGLPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVIIDNI 60
          DGLPKKVDWVESA VTPPRDQGPSPTC AYSGVAAIESMNKIKRGQLVNLTVVDVIIDNI
Sbjct: 14 DGLPKKVDWVESAAVTPPRDQGPSPTCRAYSGVAAIESMNKIKRGQLVNLTVVDVIIDNI 73

Query: 61 RFWMDGAWPDV 72
          RFWMDGAWPDV
Sbjct: 74 RFWMDGAWPDV 84

[Close]
BLAST of CsaV3_3G010970 vs. NCBI nr
Match: XP_011652750.1 (PREDICTED: ananain-like [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 2.4e-32
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0 

Query: 1   DGLPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVIIDNI 60
           DGLPKKVDWVESA VTPPRDQGPSPTC AYSGVAAIESMNKIKRGQLVNLTVVDVIIDNI
Sbjct: 172 DGLPKKVDWVESAAVTPPRDQGPSPTCRAYSGVAAIESMNKIKRGQLVNLTVVDVIIDNI 231

Query: 61  RFWMDGAWPDV 72
           RFWMDGAWPDV
Sbjct: 232 RFWMDGAWPDV 242

[Close]
BLAST of CsaV3_3G010970 vs. NCBI nr
Match: XP_018824181.1 (PREDICTED: ervatamin-B-like [Juglans regia])

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-08
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0 

Query: 3   LPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVIIDNIRF 62
           LP +VDW +   VTP ++QG   +CWA+S VAA+E +NKIK GQL++L+  +++  N+  
Sbjct: 128 LPTRVDWRKKGAVTPIKNQGQCGSCWAFSTVAAVEGINKIKTGQLISLSEQELVDCNLDT 187

Query: 63  WMDG 67
           W  G
Sbjct: 188 WCQG 191

[Close]
BLAST of CsaV3_3G010970 vs. NCBI nr
Match: XP_012079031.1 (ervatamin-B [Jatropha curcas])

HSP 1 Score: 66.2 bits (160), Expect = 7.0e-08
Identity = 27/54 (50.00%), Postives = 40/54 (74.07%), Query Frame = 0 

Query: 3   LPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVI 57
           LP  VDW++   VTP +DQG   +CWA+S VAA+E +NKIK G+LV+L+  +++
Sbjct: 128 LPTSVDWIKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKIKTGKLVSLSEQELV 181

[Close]
BLAST of CsaV3_3G010970 vs. NCBI nr
Match: KDO45769.1 (hypothetical protein CISIN_1g041120mg [Citrus sinensis])

HSP 1 Score: 65.5 bits (158), Expect = 1.2e-07
Identity = 27/55 (49.09%), Postives = 40/55 (72.73%), Query Frame = 0 

Query: 2   GLPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVI 57
           GLP  VDW +   VTP +DQG   +CWA+S VAA+E +NK+K G+LV+L+  +++
Sbjct: 141 GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195

[Close]
BLAST of CsaV3_3G010970 vs. TAIR10
Match: AT4G11310.1 (Papain family cysteine protease)

HSP 1 Score: 60.8 bits (146), Expect = 5.4e-10
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 0 

Query: 1   DGLPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVI 57
           D LPK VDW     VT  +DQG   +CWA+S V A+E +NKI  G+LV L+  D+I
Sbjct: 135 DVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLI 190

[Close]
BLAST of CsaV3_3G010970 vs. TAIR10
Match: AT1G06260.1 (Cysteine proteinases superfamily protein)

HSP 1 Score: 60.5 bits (145), Expect = 7.0e-10
Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 0 

Query: 3   LPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVIIDNIRF 62
           +P  VDW     VTP R+QG    CWA+S VAAIE +NKIK G LV+L+   +I  ++  
Sbjct: 127 VPDAVDWRTQGAVTPIRNQGKCGGCWAFSAVAAIEGINKIKTGNLVSLSEQQLIDCDVGT 186

Query: 63  WMDGAWPDVGIVKTTC-CSKTHGDVSGE 90
           +  G     G+++T     KT+G ++ E
Sbjct: 187 YNKGC--SGGLMETAFEFIKTNGGLATE 212

[Close]
BLAST of CsaV3_3G010970 vs. TAIR10
Match: AT4G11320.1 (Papain family cysteine protease)

HSP 1 Score: 60.5 bits (145), Expect = 7.0e-10
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 0 

Query: 1   DGLPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVI 57
           D LPK VDW     VT  +DQG   +CWA+S V A+E +NKI  G+LV L+  D+I
Sbjct: 142 DVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLI 197

[Close]
BLAST of CsaV3_3G010970 vs. TAIR10
Match: AT3G19390.1 (Granulin repeat cysteine protease family protein)

HSP 1 Score: 59.3 bits (142), Expect = 1.6e-09
Identity = 22/56 (39.29%), Postives = 37/56 (66.07%), Query Frame = 0 

Query: 1   DGLPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVI 57
           D LP  +DW     V P +DQG   +CWA+S + A+E +N+IK G+L++L+  +++
Sbjct: 127 DSLPDAIDWRAKGAVNPVKDQGSCGSCWAFSAIGAVEGINQIKTGELISLSEQELV 182

[Close]
BLAST of CsaV3_3G010970 vs. TAIR10
Match: AT4G23520.1 (Cysteine proteinases superfamily protein)

HSP 1 Score: 59.3 bits (142), Expect = 1.6e-09
Identity = 25/60 (41.67%), Postives = 41/60 (68.33%), Query Frame = 0 

Query: 1   DGLPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVIIDNI 60
           D LP+ VDW +   V+  +DQG   +CWA+S VAA+E +NKI  G+L++L+  +++  N+
Sbjct: 131 DQLPESVDWRQEGAVSEIKDQGTCNSCWAFSTVAAVEGLNKIVTGELISLSEQELVDCNL 190

[Close]
BLAST of CsaV3_3G010970 vs. Swiss-Prot
Match: sp|P80884|ANAN_ANACO (Ananain OS=Ananas comosus OX=4615 GN=AN1 PE=1 SV=2)

HSP 1 Score: 61.6 bits (148), Expect = 5.7e-09
Identity = 25/66 (37.88%), Postives = 42/66 (63.64%), Query Frame = 0 

Query: 3   LPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVIIDNIRF 62
           +P+ +DW +S  VT  ++QG   +CWA++ +A +ES+ KIKRG LV+L+   V+   + +
Sbjct: 123 VPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDCAVSY 182

Query: 63  WMDGAW 69
              G W
Sbjct: 183 GCKGGW 188

[Close]
BLAST of CsaV3_3G010970 vs. Swiss-Prot
Match: sp|Q9SUT0|RDL4_ARATH (Probable cysteine protease RDL4 OS=Arabidopsis thaliana OX=3702 GN=RDL4 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 9.7e-09
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 0 

Query: 1   DGLPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVI 57
           D LPK VDW     VT  +DQG   +CWA+S V A+E +NKI  G+LV L+  D+I
Sbjct: 135 DVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLI 190

[Close]
BLAST of CsaV3_3G010970 vs. Swiss-Prot
Match: sp|Q9SUS9|RDL5_ARATH (Probable cysteine protease RDL5 OS=Arabidopsis thaliana OX=3702 GN=RDL5 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-08
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 0 

Query: 1   DGLPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVI 57
           D LPK VDW     VT  +DQG   +CWA+S V A+E +NKI  G+LV L+  D+I
Sbjct: 142 DVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLI 197

[Close]
BLAST of CsaV3_3G010970 vs. Swiss-Prot
Match: sp|P10056|PAPA3_CARPA (Caricain OS=Carica papaya OX=3649 PE=1 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 1.6e-08
Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 0 

Query: 3   LPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVI 57
           LP+ VDW +   VTP R QG   +CWA+S VA +E +NKI+ G+LV L+  +++
Sbjct: 133 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELV 186

[Close]
BLAST of CsaV3_3G010970 vs. Swiss-Prot
Match: sp|Q9LT78|RD21C_ARATH (Probable cysteine protease RD21C OS=Arabidopsis thaliana OX=3702 GN=RD21C PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.8e-08
Identity = 22/56 (39.29%), Postives = 37/56 (66.07%), Query Frame = 0 

Query: 1   DGLPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVI 57
           D LP  +DW     V P +DQG   +CWA+S + A+E +N+IK G+L++L+  +++
Sbjct: 127 DSLPDAIDWRAKGAVNPVKDQGSCGSCWAFSAIGAVEGINQIKTGELISLSEQELV 182

[Close]
BLAST of CsaV3_3G010970 vs. TrEMBL
Match: tr|A0A0A0L7Y4|A0A0A0L7Y4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131900 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-32
Identity = 69/71 (97.18%), Postives = 69/71 (97.18%), Query Frame = 0 

Query: 1  DGLPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVIIDNI 60
          DGLPKKVDWVESA VTPPRDQGPSPTC AYSGVAAIESMNKIKRGQLVNLTVVDVIIDNI
Sbjct: 14 DGLPKKVDWVESAAVTPPRDQGPSPTCRAYSGVAAIESMNKIKRGQLVNLTVVDVIIDNI 73

Query: 61 RFWMDGAWPDV 72
          RFWMDGAWPDV
Sbjct: 74 RFWMDGAWPDV 84

[Close]
BLAST of CsaV3_3G010970 vs. TrEMBL
Match: tr|A0A2I4EXQ7|A0A2I4EXQ7_9ROSI (ervatamin-B-like OS=Juglans regia OX=51240 GN=LOC108993649 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.4e-09
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0 

Query: 3   LPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVIIDNIRF 62
           LP +VDW +   VTP ++QG   +CWA+S VAA+E +NKIK GQL++L+  +++  N+  
Sbjct: 128 LPTRVDWRKKGAVTPIKNQGQCGSCWAFSTVAAVEGINKIKTGQLISLSEQELVDCNLDT 187

Query: 63  WMDG 67
           W  G
Sbjct: 188 WCQG 191

[Close]
BLAST of CsaV3_3G010970 vs. TrEMBL
Match: tr|A0A1D1YSU4|A0A1D1YSU4_9ARAE (Cysteine proteinase RD21a (Fragment) OS=Anthurium amnicola OX=1678845 GN=RD21A_6 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.1e-08
Identity = 30/72 (41.67%), Postives = 46/72 (63.89%), Query Frame = 0 

Query: 1   DGLPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVIIDNI 60
           D LPK VDW +   V+P + QG   +CWA+S VAAIE +++I  G+++ L+   ++  N 
Sbjct: 158 DMLPKSVDWRDKGAVSPVKHQGHCGSCWAFSTVAAIEGLHQITTGRMLTLSEQQLLDCNK 217

Query: 61  RFW-MDGAWPDV 72
           + W  DG WPD+
Sbjct: 218 KNWGCDGGWPDI 229

[Close]
BLAST of CsaV3_3G010970 vs. TrEMBL
Match: tr|A0A2N9IKF6|A0A2N9IKF6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52502 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.1e-08
Identity = 31/65 (47.69%), Postives = 43/65 (66.15%), Query Frame = 0 

Query: 2  GLPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVIIDNIR 61
          GLP  VDW +  VVTP +DQG    CWA+S VAA+E +NKIK G LV+L+  +++  +I 
Sbjct: 15 GLPTSVDWRKEGVVTPIKDQGECGGCWAFSAVAAVEGINKIKTGNLVSLSEQELMDCDIN 74

Query: 62 FWMDG 67
             +G
Sbjct: 75 TGNEG 79

[Close]
BLAST of CsaV3_3G010970 vs. TrEMBL
Match: tr|A0A2H5QQA3|A0A2H5QQA3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_251670 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.9e-08
Identity = 27/55 (49.09%), Postives = 40/55 (72.73%), Query Frame = 0 

Query: 2   GLPKKVDWVESAVVTPPRDQGPSPTCWAYSGVAAIESMNKIKRGQLVNLTVVDVI 57
           GLP  VDW +   VTP +DQG   +CWA+S VAA+E +NK+K G+LV+L+  +++
Sbjct: 141 GLPASVDWRKEGAVTPVKDQGQCGSCWAFSAVAAVEGINKLKTGKLVSLSEQELV 195

The following BLAST results are available for this feature:
BLAST of CsaV3_3G010970 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56737.12.4e-3297.18hypothetical protein Csa_3G131900 [Cucumis sativus][more]
XP_011652750.12.4e-3297.18PREDICTED: ananain-like [Cucumis sativus][more]
XP_018824181.11.4e-0845.31PREDICTED: ervatamin-B-like [Juglans regia][more]
XP_012079031.17.0e-0850.00ervatamin-B [Jatropha curcas][more]
KDO45769.11.2e-0749.09hypothetical protein CISIN_1g041120mg [Citrus sinensis][more]
BLAST of CsaV3_3G010970 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G11310.15.4e-1050.00Papain family cysteine protease[more]
AT1G06260.17.0e-1039.77Cysteine proteinases superfamily protein[more]
AT4G11320.17.0e-1050.00Papain family cysteine protease[more]
AT3G19390.11.6e-0939.29Granulin repeat cysteine protease family protein[more]
AT4G23520.11.6e-0941.67Cysteine proteinases superfamily protein[more]
BLAST of CsaV3_3G010970 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P80884|ANAN_ANACO5.7e-0937.88Ananain OS=Ananas comosus OX=4615 GN=AN1 PE=1 SV=2[more]
sp|Q9SUT0|RDL4_ARATH9.7e-0950.00Probable cysteine protease RDL4 OS=Arabidopsis thaliana OX=3702 GN=RDL4 PE=2 SV=... [more]
sp|Q9SUS9|RDL5_ARATH1.3e-0850.00Probable cysteine protease RDL5 OS=Arabidopsis thaliana OX=3702 GN=RDL5 PE=2 SV=... [more]
sp|P10056|PAPA3_CARPA1.6e-0846.30Caricain OS=Carica papaya OX=3649 PE=1 SV=2[more]
sp|Q9LT78|RD21C_ARATH2.8e-0839.29Probable cysteine protease RD21C OS=Arabidopsis thaliana OX=3702 GN=RD21C PE=1 S... [more]
BLAST of CsaV3_3G010970 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L7Y4|A0A0A0L7Y4_CUCSA1.6e-3297.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131900 PE=3 SV=1[more]
tr|A0A2I4EXQ7|A0A2I4EXQ7_9ROSI9.4e-0945.31ervatamin-B-like OS=Juglans regia OX=51240 GN=LOC108993649 PE=3 SV=1[more]
tr|A0A1D1YSU4|A0A1D1YSU4_9ARAE2.1e-0841.67Cysteine proteinase RD21a (Fragment) OS=Anthurium amnicola OX=1678845 GN=RD21A_6... [more]
tr|A0A2N9IKF6|A0A2N9IKF6_FAGSY6.1e-0847.69Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS52502 PE=3 SV=1[more]
tr|A0A2H5QQA3|A0A2H5QQA3_CITUN7.9e-0849.09Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_251670 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain_like_cys_pep_sf
IPR013128Peptidase_C1A
IPR000668Peptidase_C1A_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0008234 cysteine-type peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G010970.1CsaV3_3G010970.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000668Peptidase C1A, papain C-terminalPFAMPF00112Peptidase_C1coord: 3..55
e-value: 8.2E-9
score: 35.8
NoneNo IPR availableGENE3DG3DSA:3.90.70.10coord: 1..92
e-value: 1.9E-14
score: 55.9
NoneNo IPR availablePANTHERPTHR12411:SF521SUBFAMILY NOT NAMEDcoord: 1..53
IPR013128Peptidase C1APANTHERPTHR12411CYSTEINE PROTEASE FAMILY C1-RELATEDcoord: 1..53
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILYSSF54001Cysteine proteinasescoord: 2..56

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_3G010970CSPI03G10860Wild cucumber (PI 183967)cpicucB144
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G010970Watermelon (97103) v2cucwmbB206
CsaV3_3G010970Watermelon (97103) v2cucwmbB233
CsaV3_3G010970Wax gourdcucwgoB254
CsaV3_3G010970Wax gourdcucwgoB273
CsaV3_3G010970Silver-seed gourdcarcucB0200
CsaV3_3G010970Silver-seed gourdcarcucB0260
CsaV3_3G010970Silver-seed gourdcarcucB1003
CsaV3_3G010970Silver-seed gourdcarcucB1126
CsaV3_3G010970Cucumber (Gy14) v2cgybcucB079
CsaV3_3G010970Cucumber (Gy14) v2cgybcucB117
CsaV3_3G010970Cucumber (Gy14) v1cgycucB387
CsaV3_3G010970Cucurbita maxima (Rimu)cmacucB0291
CsaV3_3G010970Cucurbita maxima (Rimu)cmacucB0425
CsaV3_3G010970Cucurbita maxima (Rimu)cmacucB0624
CsaV3_3G010970Cucurbita maxima (Rimu)cmacucB0965
CsaV3_3G010970Cucurbita maxima (Rimu)cmacucB0981
CsaV3_3G010970Cucurbita moschata (Rifu)cmocucB0283
CsaV3_3G010970Cucurbita moschata (Rifu)cmocucB0420
CsaV3_3G010970Cucurbita moschata (Rifu)cmocucB0608
CsaV3_3G010970Cucurbita moschata (Rifu)cmocucB0953
CsaV3_3G010970Cucurbita moschata (Rifu)cmocucB1032
CsaV3_3G010970Cucurbita pepo (Zucchini)cpecucB0153
CsaV3_3G010970Cucurbita pepo (Zucchini)cpecucB0308
CsaV3_3G010970Cucurbita pepo (Zucchini)cpecucB0385
CsaV3_3G010970Cucurbita pepo (Zucchini)cpecucB0759
CsaV3_3G010970Cucurbita pepo (Zucchini)cpecucB1056
CsaV3_3G010970Wild cucumber (PI 183967)cpicucB093
CsaV3_3G010970Wild cucumber (PI 183967)cpicucB100
CsaV3_3G010970Bottle gourd (USVL1VR-Ls)cuclsiB163
CsaV3_3G010970Bottle gourd (USVL1VR-Ls)cuclsiB228
CsaV3_3G010970Melon (DHL92) v3.5.1cucmeB232
CsaV3_3G010970Melon (DHL92) v3.5.1cucmeB236
CsaV3_3G010970Melon (DHL92) v3.6.1cucmedB230
CsaV3_3G010970Watermelon (Charleston Gray)cucwcgB225
CsaV3_3G010970Watermelon (Charleston Gray)cucwcgB254
CsaV3_3G010970Watermelon (97103) v1cucwmB239