CsaV3_3G009860 (gene) Cucumber (Chinese Long) v3

NameCsaV3_3G009860
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr3 : 7999059 .. 7999241 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTACCGTCATCGTCCTTATCCACATGGCTTATTAAGGTACCTCCTAACACGGCATTGCAGTTTTAGGGCCAAAACCGATGGATTTTCACCGACGGGGATGGTGGTAGATCAACAACCGTCCAAAACTTTGACTTTGACCTACAATTAGCACGTGGCGCATTTATGTGTTTGTTGTAA

mRNA sequence

ATGAAAGTACCGTCATCGTCCTTATCCACATGGCTTATTAAGGGCCAAAACCGATGGATTTTCACCGACGGGGATGGTGGTAGATCAACAACCGTCCAAAACTTTGACTTTGACCTACAATTAGCACGTGGCGCATTTATGTGTTTGTTGTAA

Coding sequence (CDS)

ATGAAAGTACCGTCATCGTCCTTATCCACATGGCTTATTAAGGGCCAAAACCGATGGATTTTCACCGACGGGGATGGTGGTAGATCAACAACCGTCCAAAACTTTGACTTTGACCTACAATTAGCACGTGGCGCATTTATGTGTTTGTTGTAA

Protein sequence

MKVPSSSLSTWLIKGQNRWIFTDGDGGRSTTVQNFDFDLQLARGAFMCLL
BLAST of CsaV3_3G009860 vs. NCBI nr
Match: KGN56616.1 (hypothetical protein Csa_3G126800 [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 6.3e-21
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0

Query: 1  MKVPSSSLSTWLIKGQNRWIFTDGDGGRSTTVQNFDFDLQLARGAFMCLL 51
          MKVPSSSLSTWLIKGQNRWIFTDGDGGRSTTVQNFDFDLQLARGAFMCLL
Sbjct: 1  MKVPSSSLSTWLIKGQNRWIFTDGDGGRSTTVQNFDFDLQLARGAFMCLL 50

BLAST of CsaV3_3G009860 vs. TrEMBL
Match: tr|A0A0A0L943|A0A0A0L943_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126800 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.2e-21
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0

Query: 1  MKVPSSSLSTWLIKGQNRWIFTDGDGGRSTTVQNFDFDLQLARGAFMCLL 51
          MKVPSSSLSTWLIKGQNRWIFTDGDGGRSTTVQNFDFDLQLARGAFMCLL
Sbjct: 1  MKVPSSSLSTWLIKGQNRWIFTDGDGGRSTTVQNFDFDLQLARGAFMCLL 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN56616.16.3e-21100.00hypothetical protein Csa_3G126800 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0L943|A0A0A0L943_CUCSA4.2e-21100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G126800 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_3G009860.1CsaV3_3G009860.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_3G009860Cucumber (Chinese Long) v3cuccucB137
CsaV3_3G009860Silver-seed gourdcarcucB0260
CsaV3_3G009860Silver-seed gourdcarcucB0652
CsaV3_3G009860Silver-seed gourdcarcucB1003
CsaV3_3G009860Cucumber (Gy14) v2cgybcucB117
CsaV3_3G009860Cucumber (Gy14) v2cgybcucB269
CsaV3_3G009860Cucumber (Gy14) v1cgycucB387
CsaV3_3G009860Cucumber (Gy14) v1cgycucB553
CsaV3_3G009860Cucurbita maxima (Rimu)cmacucB0291
CsaV3_3G009860Cucurbita maxima (Rimu)cmacucB0425
CsaV3_3G009860Cucurbita maxima (Rimu)cmacucB0965
CsaV3_3G009860Cucurbita maxima (Rimu)cmacucB1057
CsaV3_3G009860Cucurbita moschata (Rifu)cmocucB0283
CsaV3_3G009860Cucurbita moschata (Rifu)cmocucB0420
CsaV3_3G009860Cucurbita moschata (Rifu)cmocucB0953
CsaV3_3G009860Cucurbita moschata (Rifu)cmocucB1039
CsaV3_3G009860Cucurbita pepo (Zucchini)cpecucB0153
CsaV3_3G009860Cucurbita pepo (Zucchini)cpecucB0381
CsaV3_3G009860Cucurbita pepo (Zucchini)cpecucB0389
CsaV3_3G009860Cucurbita pepo (Zucchini)cpecucB0759
CsaV3_3G009860Cucurbita pepo (Zucchini)cpecucB1056
CsaV3_3G009860Wild cucumber (PI 183967)cpicucB144
CsaV3_3G009860Wild cucumber (PI 183967)cpicucB335
CsaV3_3G009860Bottle gourd (USVL1VR-Ls)cuclsiB170
CsaV3_3G009860Bottle gourd (USVL1VR-Ls)cuclsiB228
CsaV3_3G009860Melon (DHL92) v3.5.1cucmeB179
CsaV3_3G009860Melon (DHL92) v3.5.1cucmeB236
CsaV3_3G009860Melon (DHL92) v3.6.1cucmedB170
CsaV3_3G009860Melon (DHL92) v3.6.1cucmedB230
CsaV3_3G009860Watermelon (Charleston Gray)cucwcgB225
CsaV3_3G009860Watermelon (Charleston Gray)cucwcgB245
CsaV3_3G009860Watermelon (Charleston Gray)cucwcgB250
CsaV3_3G009860Watermelon (97103) v1cucwmB239
CsaV3_3G009860Watermelon (97103) v1cucwmB285
CsaV3_3G009860Watermelon (97103) v2cucwmbB206
CsaV3_3G009860Watermelon (97103) v2cucwmbB229
CsaV3_3G009860Wax gourdcucwgoB263
CsaV3_3G009860Wax gourdcucwgoB269