CsaV3_3G008050 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATATTTGTTATGGGTTTATGTCTACTGAATTATAATACTTTTGTGTCCCCATGGGATCGATATTACTCAAGTTCCCAATTTCCTTAAGTTTATGTCATCCTTTGAGTATGTGTGTTTACTTAGATAAGATTTTGTTTTATTGAATGTATATACTCCAATCTTTCTTCTCGACCAACTCGAAAGAGAATCCATTATTTGTAACAATCTCATGCAATATGAAAGTGTTTGGATTCGTATGGAAATATCTACCAACAGAGCTTACTATTTTGTATTTTAAACAAAAAGACGAAGGAAAAGAAATGTGTTCAAACTCTATGGGTGTGGTGAAGGATAAAAGATTGTAGAAATGGCATATGCTTTGAGAACCATGAGATCTCAAAAGGGAAATATAACAAAGGATACTGCCGCATATTCCTTCCCCACCCCGATCCCAATGCCTGCAGCAACTCCACCACTTGATTTTAGAGTTCTTTTTTCTTTTCTTTTTTGTTTCATGAGATGGGTATCTGTTGTATTTCAACATCAACAGAACATTTGACTTGGTATTGATTCTGTATAATCCGTTAATGTGCAAATTCGTAGCTTAAACAGTGTGTTTGCAACAACTCGTAGAAGGCTCTCCAAAGTTCTGAACATCACAACGATTCAAATTCCAGAGAATTCTCTGCTCCATTTCGTCCTTTTTCTACTTGAAATGCTCATTGAACTCAGAAATCAGAACCCCTTCTTATGGAAACTGTCAGTGTAGGACTTATATCGATTCCCTTCATCTTCAACGGCTCCCCTCAACGAACTAGGCCTTGCTCTACCAACTTCTTGTCTTCTGGGTTTCTTCAATCCAAAAAGCTTCGAAGATTTCCCCACAATTTTTCTTGTATTAATCGTCCAACTACTAGAAACCAGAAATACGAAGGGGGTGATCGCAGTTTTAGTTCGAATCTTTTCTGGGTCTTGGTTCCGGTTTTGCAAAGTATCAAAGGAGTTATCTTGTCCAAAACCCACAAAGCTCAGAGTGTTTCAGAGGGATTTGTGAATGGGGGATTGAATGGAAATTACTTACAAAGCGGGAGTGTCGGGACTGCTTTGTTGAGTATAACTGCGACCGCGAAGCATCGGATTAGTCCGTTCGTTGCTACATTGGCAACGAATCCGACGTTTGTTTCGGGATTGTTTGCGTGGTTCTTTGCACAATCGACGAAGGTTTTGTTGAACTTTTTCGTAGAAAGGAAATGGGATTTGAAAATAATGTTTGCTTGTGGTGGGATGCCTTCGTCTCACTCTGCATTGTGCACAGCTTTGACGACTTCAGTGGCTCTTTGTCATGGCGTAGCGGACTCTCTTTTTCCTGTCTGCTTGGGCTTTAGTCTTATTGTCATGTATGATGCAATTGGTGTTCGTCGACATGCCGGCATGCAAGCTGAGGTACGAAAGTCTTGTTTGTCTTACTTAATCTTCTGCGAATTTCCATGAAATCTGTCTGAAAATCTTTGAGTTTAGAGTTCTCTTTTGTAGTTGCTGAGTTTATTGAAGGGTACTCAAGTTGCATCATCCATTGTCATGGGTTAGTTCTGCTGCCAGTGTTTTCGGTGTCAGTAAATGTGCTTTTGATTGCTTTGAATGAACTCTCCATCTGTTTATGAAAAAGACTGCTCTGCCGGCCAATCTACGTTAATGCTTTTTGGAATTTCCATGGAATCTCTGGCTTATGGTTCTTTCTTGTTTGCTTTGAATTTATATCCAACGGTCATTAGGAGCATCCAAATTTTTTAATCTACATCCAAGTTGTTACGAGGCAACCACCTTGGCGGCTTCTATACTATATATATATTCTGTTTGGTTAACTGTTGATTGAGCCTTTGGGTTTGTTCTTTGTAGCTTTTATTATGCTCGGTAATTTGGTATACTTGTAGTCTTTCAATGGTTTTCTTCGTGGACAATTGGGTTGGATTTTGATTATTGAGAAAACAAGGTCTTAGATTTTAACAGGGATGAAAAGAAAAGGAACGTGTAAGTTGAATCAAACTGAACTTGATCAATGATATGGTATACTTGAAC ATGGAAACTGTCAGTGTAGGACTTATATCGATTCCCTTCATCTTCAACGGCTCCCCTCAACGAACTAGGCCTTGCTCTACCAACTTCTTGTCTTCTGGGTTTCTTCAATCCAAAAAGCTTCGAAGATTTCCCCACAATTTTTCTTGTATTAATCGTCCAACTACTAGAAACCAGAAATACGAAGGGGGTGATCGCAGTTTTAGTTCGAATCTTTTCTGGGTCTTGGTTCCGGTTTTGCAAAGTATCAAAGGAGTTATCTTGTCCAAAACCCACAAAGCTCAGAGTGTTTCAGAGGGATTTGTGAATGGGGGATTGAATGGAAATTACTTACAAAGCGGGAGTGTCGGGACTGCTTTGTTGAGTATAACTGCGACCGCGAAGCATCGGATTAGTCCGTTCGTTGCTACATTGGCAACGAATCCGACGTTTGTTTCGGGATTGTTTGCGTGGTTCTTTGCACAATCGACGAAGGTTTTGTTGAACTTTTTCGTAGAAAGGAAATGGGATTTGAAAATAATGTTTGCTTGTGGTGGGATGCCTTCGTCTCACTCTGCATTGTGCACAGCTTTGACGACTTCAGTGGCTCTTTGTCATGGCGTAGCGGACTCTCTTTTTCCTGTCTGCTTGGGCTTTAGTCTTATTGTCATGTATGATGCAATTGGTGTTCGTCGACATGCCGGCATGCAAGCTGAGTTGCTGAGTTTATTGAAGGGTACTCAAGTTGCATCATCCATTGTCATGGGTTAG ATGGAAACTGTCAGTGTAGGACTTATATCGATTCCCTTCATCTTCAACGGCTCCCCTCAACGAACTAGGCCTTGCTCTACCAACTTCTTGTCTTCTGGGTTTCTTCAATCCAAAAAGCTTCGAAGATTTCCCCACAATTTTTCTTGTATTAATCGTCCAACTACTAGAAACCAGAAATACGAAGGGGGTGATCGCAGTTTTAGTTCGAATCTTTTCTGGGTCTTGGTTCCGGTTTTGCAAAGTATCAAAGGAGTTATCTTGTCCAAAACCCACAAAGCTCAGAGTGTTTCAGAGGGATTTGTGAATGGGGGATTGAATGGAAATTACTTACAAAGCGGGAGTGTCGGGACTGCTTTGTTGAGTATAACTGCGACCGCGAAGCATCGGATTAGTCCGTTCGTTGCTACATTGGCAACGAATCCGACGTTTGTTTCGGGATTGTTTGCGTGGTTCTTTGCACAATCGACGAAGGTTTTGTTGAACTTTTTCGTAGAAAGGAAATGGGATTTGAAAATAATGTTTGCTTGTGGTGGGATGCCTTCGTCTCACTCTGCATTGTGCACAGCTTTGACGACTTCAGTGGCTCTTTGTCATGGCGTAGCGGACTCTCTTTTTCCTGTCTGCTTGGGCTTTAGTCTTATTGTCATGTATGATGCAATTGGTGTTCGTCGACATGCCGGCATGCAAGCTGAGTTGCTGAGTTTATTGAAGGGTACTCAAGTTGCATCATCCATTGTCATGGGTTAG METVSVGLISIPFIFNGSPQRTRPCSTNFLSSGFLQSKKLRRFPHNFSCINRPTTRNQKYEGGDRSFSSNLFWVLVPVLQSIKGVILSKTHKAQSVSEGFVNGGLNGNYLQSGSVGTALLSITATAKHRISPFVATLATNPTFVSGLFAWFFAQSTKVLLNFFVERKWDLKIMFACGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVRRHAGMQAELLSLLKGTQVASSIVMG
BLAST of CsaV3_3G008050 vs. NCBI nr
Match: XP_011650685.1 (PREDICTED: uncharacterized protein LOC101209825 isoform X2 [Cucumis sativus]) HSP 1 Score: 492.3 bits (1266), Expect = 9.9e-136 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of CsaV3_3G008050 vs. NCBI nr
Match: XP_004133813.1 (PREDICTED: uncharacterized protein LOC101209825 isoform X1 [Cucumis sativus] >KGN56424.1 hypothetical protein Csa_3G119570 [Cucumis sativus]) HSP 1 Score: 467.2 bits (1201), Expect = 3.4e-128 Identity = 233/236 (98.73%), Postives = 236/236 (100.00%), Query Frame = 0
BLAST of CsaV3_3G008050 vs. NCBI nr
Match: XP_011650686.1 (PREDICTED: uncharacterized protein LOC101209825 isoform X3 [Cucumis sativus]) HSP 1 Score: 463.0 bits (1190), Expect = 6.4e-127 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
BLAST of CsaV3_3G008050 vs. NCBI nr
Match: XP_008437892.1 (PREDICTED: uncharacterized protein LOC103483186 isoform X1 [Cucumis melo]) HSP 1 Score: 454.1 bits (1167), Expect = 3.0e-124 Identity = 226/236 (95.76%), Postives = 231/236 (97.88%), Query Frame = 0
BLAST of CsaV3_3G008050 vs. NCBI nr
Match: XP_016898935.1 (PREDICTED: uncharacterized protein LOC103483186 isoform X2 [Cucumis melo]) HSP 1 Score: 449.9 bits (1156), Expect = 5.6e-123 Identity = 224/233 (96.14%), Postives = 227/233 (97.42%), Query Frame = 0
BLAST of CsaV3_3G008050 vs. TAIR10
Match: AT3G61770.1 (Acid phosphatase/vanadium-dependent haloperoxidase-related protein) HSP 1 Score: 214.5 bits (545), Expect = 7.2e-56 Identity = 117/225 (52.00%), Postives = 153/225 (68.00%), Query Frame = 0
BLAST of CsaV3_3G008050 vs. TAIR10
Match: AT1G67600.1 (Acid phosphatase/vanadium-dependent haloperoxidase-related protein) HSP 1 Score: 92.0 bits (227), Expect = 5.4e-19 Identity = 52/114 (45.61%), Postives = 69/114 (60.53%), Query Frame = 0
BLAST of CsaV3_3G008050 vs. TAIR10
Match: AT1G24350.3 (Acid phosphatase/vanadium-dependent haloperoxidase-related protein) HSP 1 Score: 89.7 bits (221), Expect = 2.7e-18 Identity = 49/112 (43.75%), Postives = 68/112 (60.71%), Query Frame = 0
BLAST of CsaV3_3G008050 vs. TAIR10
Match: AT3G21610.1 (Acid phosphatase/vanadium-dependent haloperoxidase-related protein) HSP 1 Score: 70.1 bits (170), Expect = 2.2e-12 Identity = 40/95 (42.11%), Postives = 50/95 (52.63%), Query Frame = 0
BLAST of CsaV3_3G008050 vs. TAIR10
Match: AT3G12685.1 (Acid phosphatase/vanadium-dependent haloperoxidase-related protein) HSP 1 Score: 59.3 bits (142), Expect = 3.9e-09 Identity = 29/78 (37.18%), Postives = 47/78 (60.26%), Query Frame = 0
BLAST of CsaV3_3G008050 vs. Swiss-Prot
Match: sp|O32107|YUID_BACSU (Uncharacterized membrane protein YuiD OS=Bacillus subtilis (strain 168) OX=224308 GN=yuiD PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 5.7e-18 Identity = 53/100 (53.00%), Postives = 66/100 (66.00%), Query Frame = 0
BLAST of CsaV3_3G008050 vs. TrEMBL
Match: tr|A0A0A0L5W5|A0A0A0L5W5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119570 PE=4 SV=1) HSP 1 Score: 467.2 bits (1201), Expect = 2.3e-128 Identity = 233/236 (98.73%), Postives = 236/236 (100.00%), Query Frame = 0
BLAST of CsaV3_3G008050 vs. TrEMBL
Match: tr|A0A1S3AUQ7|A0A1S3AUQ7_CUCME (uncharacterized protein LOC103483186 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483186 PE=4 SV=1) HSP 1 Score: 454.1 bits (1167), Expect = 2.0e-124 Identity = 226/236 (95.76%), Postives = 231/236 (97.88%), Query Frame = 0
BLAST of CsaV3_3G008050 vs. TrEMBL
Match: tr|A0A1S4DTA7|A0A1S4DTA7_CUCME (uncharacterized protein LOC103483186 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483186 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 3.7e-123 Identity = 224/233 (96.14%), Postives = 227/233 (97.42%), Query Frame = 0
BLAST of CsaV3_3G008050 vs. TrEMBL
Match: tr|A0A2I4EG55|A0A2I4EG55_9ROSI (uncharacterized protein LOC108989283 isoform X2 OS=Juglans regia OX=51240 GN=LOC108989283 PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 3.2e-66 Identity = 140/242 (57.85%), Postives = 175/242 (72.31%), Query Frame = 0
BLAST of CsaV3_3G008050 vs. TrEMBL
Match: tr|A0A2I4EG54|A0A2I4EG54_9ROSI (uncharacterized protein LOC108989283 isoform X1 OS=Juglans regia OX=51240 GN=LOC108989283 PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 3.2e-66 Identity = 140/242 (57.85%), Postives = 175/242 (72.31%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |