CsaV3_3G006790 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGAGAGAGTTTTGAAATAGTACGAAATATGAAGACATATATACATTATACATCATATAAAATTTAACCATCTTCTTATCTTTTGTATTCACCCCCACTTGCTCCCATTCACCTTCACAAAAAAATTTATATATATAATAATTTACACCCACATAAAGCCATACCCAGAGAGAGAAAAAAAGAGATACAAAAGAGAGAGAGAGAGAGGAGAGAGAGAGAGAGAGGGAGAGAAAAGGAAAGAAAGAAAGAGAAAGTGATTTTTAAAATCAGGAATTTTATGGCAATTGCAGCTGCAGCAAGAAGCAGTTCAGCAAGGATGAGGCAAGAAGAAATTAGCAGCAACAAAACCAACAACAACAACAACAACTGCGAAGATCACGACGATATCGATCATGATCAACATGAACACGACGTCGTTATGCCTGGCTTCCGCTTCCACCCTACTGAAGAAGAACTCGTTGAATTCTACCTTCGCCGTAAGGTCGAGGGCAAACGCTTTAATGTCGAGCTCATCACTTTTCTTGATCTTTATCGCTACGACCCTTGGGAGCTTCCTGGTATTACTTTCTCCCCTTTTTTTTTCCTTTTCTCCTTATAACCCTATAATTACAATTCCTCAATTTCTTCATTTCCTTAGCTTTGGCTGCCATCGGAGAGAAGGAATGGTTCTTCTATGTCCCTCGCGATCGTAAATACCGTAACGGTGACCGTCCCAATCGTGTTACTACCTCCGGCTATTGGAAGGCCACCGGTGCCGATCGCATGATTCGTACCGAGGATTTTCGTTCTATTGGCCTTAAGAAAACCCTAGTTTTTTACTCCGGCAAGGCTCCTAAGGGTATTCGTACTAGTTGGATTATGAACGAGTATCGCTTGCCCCATCATGAGACCGAACGATATCAAAAGGTTTTTCCAGCAATGACCTTACTTTTCATTTCACTTTGAAAATTCTGGAGTTGGGTTAGTCTAATCATTAATTTCCAAGAGAGAATTTATGAATCTCGCGTTTGTTTTGTAGTCGTACACATACCCTTATAACTGATCAGTCTCTGACAGTACTTTTTTTTTTGGGTTTGTTTAAATGTTTTGTCATGAATTGCGTGATTTGCTTTAAATTCTCCCCCCAAGTTTTCAGAGGAAGAGAGAGAAGATAAAGAAAAACCTGCTCAGATTTTGCTTCTCAAGTTATGTTCGTCTGTGGTGGTTTTATTGAATAATTTTCTTTTTCAATTTTGATGTTCAGGCGGAGATTTCGTTGTGTCGGGTATACAAAAGAGCCGGAGTCGAAGATCACCCTTCACTCCCTCGCTCTCTCCCGTCAAGAGCATCGTCTTCCCGAATGACAAGCTCGAAGAATAATCTTCTTCCGGGTGGTGGCTCAGTTAATGTCGTCCAAACTTCATCCTCATCCACGGATAAATTTCCGACGAGCTTCGAGTCGCAATTCCACCCTCACCAACTTCAAATTGGCTCTGGAGTTGAAGCTACCGCAGCCGACGCCTCCGCCACCAGCTCTTGTGAAGAAGTTACAACTGTTCTTGGCCTCTCCAAACAAAACCCTTTTCCCACTTCTCCATTAATCAACATGGCTGCTACTTCTTCTCTTCAAATTCCAGCTTCAGCTTCTACTACTCCCAATTGCATGGAAGAAGATGATCACCAATCCATTATTCTTCATAAACAACAACAACAACAACAGCAACAATTATTACCTTCTTCTTCTTCACTTATTTTGCCAACTTACACCTCTTTCTTCTCTCCTTCTTCCAATAATTCCCTTGATGACCTACAGAAACTCATTCACTATCAACAACAACAACCACCGCTATCTGCTTCGCCCACCACCATCATAAACTCTTTACCTTCGCAATATTACCAACCGACACCACCACCTCCTCCGCAACAACTCGCCCTCAACACGCTACCAGTTGTATTCTCCGACAGACTTTGGGACTGGAATTCGATCCAAGACGCAGCCAATCCCTTCAAGTAAATTGTCAACAAATGAAAAACTCAAACCTTAACGTACGCAAATTTAGCTATATTCAGGTTGGCAATATCTTATGCTTAGTACTCATCATGACATATATGATTGAAGAATAACGTCCCCTTGTTACTACCTCAAAACTACTTCAATGTCCATTTTTTTCTTTTAATCTATTGAGCTGCATGATATCATGTGAACATATATATATAACTAATCTGAGAAATATTATATAATTATAGTTAGTTTATTGCATAGTATATGTAGGAGGATTTTCATTATATATTAAAATAATTAGTTTAGGGACGTTTTATATTTGCAAGAGATCCAAAGGGGATCTTGTTGGTTGTAACTTGTTGAAGTGTTATCATATCTCGATATCAATGATAATAGAATGTTTCTTCTTCCCAAG ATGGCAATTGCAGCTGCAGCAAGAAGCAGTTCAGCAAGGATGAGGCAAGAAGAAATTAGCAGCAACAAAACCAACAACAACAACAACAACTGCGAAGATCACGACGATATCGATCATGATCAACATGAACACGACGTCGTTATGCCTGGCTTCCGCTTCCACCCTACTGAAGAAGAACTCGTTGAATTCTACCTTCGCCGTAAGGTCGAGGGCAAACGCTTTAATGTCGAGCTCATCACTTTTCTTGATCTTTATCGCTACGACCCTTGGGAGCTTCCTGCTTTGGCTGCCATCGGAGAGAAGGAATGGTTCTTCTATGTCCCTCGCGATCGTAAATACCGTAACGGTGACCGTCCCAATCGTGTTACTACCTCCGGCTATTGGAAGGCCACCGGTGCCGATCGCATGATTCGTACCGAGGATTTTCGTTCTATTGGCCTTAAGAAAACCCTAGTTTTTTACTCCGGCAAGGCTCCTAAGGGTATTCGTACTAGTTGGATTATGAACGAGTATCGCTTGCCCCATCATGAGACCGAACGATATCAAAAGGCGGAGATTTCGTTGTGTCGGGTATACAAAAGAGCCGGAGTCGAAGATCACCCTTCACTCCCTCGCTCTCTCCCGTCAAGAGCATCGTCTTCCCGAATGACAAGCTCGAAGAATAATCTTCTTCCGGGTGGTGGCTCAGTTAATGTCGTCCAAACTTCATCCTCATCCACGGATAAATTTCCGACGAGCTTCGAGTCGCAATTCCACCCTCACCAACTTCAAATTGGCTCTGGAGTTGAAGCTACCGCAGCCGACGCCTCCGCCACCAGCTCTTGTGAAGAAGTTACAACTGTTCTTGGCCTCTCCAAACAAAACCCTTTTCCCACTTCTCCATTAATCAACATGGCTGCTACTTCTTCTCTTCAAATTCCAGCTTCAGCTTCTACTACTCCCAATTGCATGGAAGAAGATGATCACCAATCCATTATTCTTCATAAACAACAACAACAACAACAGCAACAATTATTACCTTCTTCTTCTTCACTTATTTTGCCAACTTACACCTCTTTCTTCTCTCCTTCTTCCAATAATTCCCTTGATGACCTACAGAAACTCATTCACTATCAACAACAACAACCACCGCTATCTGCTTCGCCCACCACCATCATAAACTCTTTACCTTCGCAATATTACCAACCGACACCACCACCTCCTCCGCAACAACTCGCCCTCAACACGCTACCAGTTGTATTCTCCGACAGACTTTGGGACTGGAATTCGATCCAAGACGCAGCCAATCCCTTCAAGTAA ATGGCAATTGCAGCTGCAGCAAGAAGCAGTTCAGCAAGGATGAGGCAAGAAGAAATTAGCAGCAACAAAACCAACAACAACAACAACAACTGCGAAGATCACGACGATATCGATCATGATCAACATGAACACGACGTCGTTATGCCTGGCTTCCGCTTCCACCCTACTGAAGAAGAACTCGTTGAATTCTACCTTCGCCGTAAGGTCGAGGGCAAACGCTTTAATGTCGAGCTCATCACTTTTCTTGATCTTTATCGCTACGACCCTTGGGAGCTTCCTGCTTTGGCTGCCATCGGAGAGAAGGAATGGTTCTTCTATGTCCCTCGCGATCGTAAATACCGTAACGGTGACCGTCCCAATCGTGTTACTACCTCCGGCTATTGGAAGGCCACCGGTGCCGATCGCATGATTCGTACCGAGGATTTTCGTTCTATTGGCCTTAAGAAAACCCTAGTTTTTTACTCCGGCAAGGCTCCTAAGGGTATTCGTACTAGTTGGATTATGAACGAGTATCGCTTGCCCCATCATGAGACCGAACGATATCAAAAGGCGGAGATTTCGTTGTGTCGGGTATACAAAAGAGCCGGAGTCGAAGATCACCCTTCACTCCCTCGCTCTCTCCCGTCAAGAGCATCGTCTTCCCGAATGACAAGCTCGAAGAATAATCTTCTTCCGGGTGGTGGCTCAGTTAATGTCGTCCAAACTTCATCCTCATCCACGGATAAATTTCCGACGAGCTTCGAGTCGCAATTCCACCCTCACCAACTTCAAATTGGCTCTGGAGTTGAAGCTACCGCAGCCGACGCCTCCGCCACCAGCTCTTGTGAAGAAGTTACAACTGTTCTTGGCCTCTCCAAACAAAACCCTTTTCCCACTTCTCCATTAATCAACATGGCTGCTACTTCTTCTCTTCAAATTCCAGCTTCAGCTTCTACTACTCCCAATTGCATGGAAGAAGATGATCACCAATCCATTATTCTTCATAAACAACAACAACAACAACAGCAACAATTATTACCTTCTTCTTCTTCACTTATTTTGCCAACTTACACCTCTTTCTTCTCTCCTTCTTCCAATAATTCCCTTGATGACCTACAGAAACTCATTCACTATCAACAACAACAACCACCGCTATCTGCTTCGCCCACCACCATCATAAACTCTTTACCTTCGCAATATTACCAACCGACACCACCACCTCCTCCGCAACAACTCGCCCTCAACACGCTACCAGTTGTATTCTCCGACAGACTTTGGGACTGGAATTCGATCCAAGACGCAGCCAATCCCTTCAAGTAA MAIAAAARSSSARMRQEEISSNKTNNNNNNCEDHDDIDHDQHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTEDFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHETERYQKAEISLCRVYKRAGVEDHPSLPRSLPSRASSSRMTSSKNNLLPGGGSVNVVQTSSSSTDKFPTSFESQFHPHQLQIGSGVEATAADASATSSCEEVTTVLGLSKQNPFPTSPLINMAATSSLQIPASASTTPNCMEEDDHQSIILHKQQQQQQQQLLPSSSSLILPTYTSFFSPSSNNSLDDLQKLIHYQQQQPPLSASPTTIINSLPSQYYQPTPPPPPQQLALNTLPVVFSDRLWDWNSIQDAANPFK
BLAST of CsaV3_3G006790 vs. NCBI nr
Match: XP_011650588.1 (PREDICTED: NAC domain-containing protein 55 [Cucumis sativus] >KGN56295.1 hypothetical protein Csa_3G113370 [Cucumis sativus]) HSP 1 Score: 560.8 bits (1444), Expect = 3.9e-156 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. NCBI nr
Match: XP_008452197.1 (PREDICTED: NAC domain-containing protein 55 [Cucumis melo]) HSP 1 Score: 538.1 bits (1385), Expect = 2.7e-149 Identity = 377/390 (96.67%), Postives = 382/390 (97.95%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. NCBI nr
Match: XP_022136478.1 (NAC domain-containing protein 35 [Momordica charantia]) HSP 1 Score: 465.7 bits (1197), Expect = 1.7e-127 Identity = 237/264 (89.77%), Postives = 248/264 (93.94%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. NCBI nr
Match: XP_022985335.1 (NAC domain-containing protein 35-like [Cucurbita maxima]) HSP 1 Score: 447.2 bits (1149), Expect = 6.3e-122 Identity = 336/395 (85.06%), Postives = 342/395 (86.58%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. NCBI nr
Match: XP_022978070.1 (NAC domain-containing protein 35 [Cucurbita maxima]) HSP 1 Score: 444.1 bits (1141), Expect = 5.4e-121 Identity = 228/259 (88.03%), Postives = 234/259 (90.35%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. TAIR10
Match: AT2G02450.2 (NAC domain containing protein 35) HSP 1 Score: 328.2 bits (840), Expect = 7.8e-90 Identity = 151/163 (92.64%), Postives = 158/163 (96.93%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. TAIR10
Match: AT1G26870.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein) HSP 1 Score: 198.4 bits (503), Expect = 9.3e-51 Identity = 105/233 (45.06%), Postives = 146/233 (62.66%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. TAIR10
Match: AT2G17040.1 (NAC domain containing protein 36) HSP 1 Score: 195.3 bits (495), Expect = 7.9e-50 Identity = 91/182 (50.00%), Postives = 131/182 (71.98%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. TAIR10
Match: AT5G39820.1 (NAC domain containing protein 94) HSP 1 Score: 192.2 bits (487), Expect = 6.7e-49 Identity = 104/226 (46.02%), Postives = 136/226 (60.18%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. TAIR10
Match: AT2G43000.1 (NAC domain containing protein 42) HSP 1 Score: 184.1 bits (466), Expect = 1.8e-46 Identity = 83/159 (52.20%), Postives = 119/159 (74.84%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. Swiss-Prot
Match: sp|Q9ZVP8|NAC35_ARATH (NAC domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=NAC035 PE=1 SV=2) HSP 1 Score: 328.2 bits (840), Expect = 1.4e-88 Identity = 151/163 (92.64%), Postives = 158/163 (96.93%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. Swiss-Prot
Match: sp|Q9ZVH0|FEZ_ARATH (Protein FEZ OS=Arabidopsis thaliana OX=3702 GN=FEZ PE=2 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.7e-49 Identity = 105/233 (45.06%), Postives = 146/233 (62.66%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. Swiss-Prot
Match: sp|Q10S65|NAC22_ORYSJ (NAC domain-containing protein 22 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC022 PE=2 SV=1) HSP 1 Score: 194.5 bits (493), Expect = 2.4e-48 Identity = 93/187 (49.73%), Postives = 130/187 (69.52%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. Swiss-Prot
Match: sp|Q9FIW5|NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana OX=3702 GN=ANAC094 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.2e-47 Identity = 104/226 (46.02%), Postives = 136/226 (60.18%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. Swiss-Prot
Match: sp|Q93VY3|NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.3e-46 Identity = 86/148 (58.11%), Postives = 111/148 (75.00%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. TrEMBL
Match: tr|A0A0A0L2S0|A0A0A0L2S0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G113370 PE=4 SV=1) HSP 1 Score: 560.8 bits (1444), Expect = 2.6e-156 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. TrEMBL
Match: tr|A0A1S3BTB3|A0A1S3BTB3_CUCME (NAC domain-containing protein 55 OS=Cucumis melo OX=3656 GN=LOC103493289 PE=4 SV=1) HSP 1 Score: 538.1 bits (1385), Expect = 1.8e-149 Identity = 377/390 (96.67%), Postives = 382/390 (97.95%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. TrEMBL
Match: tr|A0A2I4FS91|A0A2I4FS91_9ROSI (NAC domain-containing protein 35 OS=Juglans regia OX=51240 GN=LOC109001588 PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 4.7e-97 Identity = 189/264 (71.59%), Postives = 209/264 (79.17%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. TrEMBL
Match: tr|V4SZW9|V4SZW9_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001346mg PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 4.0e-96 Identity = 195/268 (72.76%), Postives = 212/268 (79.10%), Query Frame = 0
BLAST of CsaV3_3G006790 vs. TrEMBL
Match: tr|A0A2H5QU86|A0A2H5QU86_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_259740 PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 4.0e-96 Identity = 195/268 (72.76%), Postives = 212/268 (79.10%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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