CsaV3_3G005440 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TAATTTATGTTTTCCAAAGTTAACGGTCACCAACAATAAACAAAATATTATCCACTTATGATTGAAACTTAGATGAAGAACTCGCTTCTCATTTTCTTCTTTCTTTTCTCTCATCAATGGCCTTCGATCTTCTCAAATTTCATTCCCAAATAACCGTACCTGCTAAACCCATTTTCCCTAATCTACTCCCCACCAAGAATTTCTTCCCTCTCCTTCCAGTTCCTCCCTCTCAGCTCTTCCCAAATCCCCATTTCCATGTCTCCTTCTATCTTCCTCATTCAACTCACATATCAAGAACAATCCCTTTTATACTTCATTCTTCTTTGTCTTCTTCAACCCCACCCACCTCAAAACACGATGCCATTTCCCAGGCCAAAACCTGCCTCTCTACCACACTCGAAAAGCCCCTCAACAACATTAGGTTTTCCGGTAAGATCATCAAGAAGGCAAAGCAACCCAGATTCCGTGTGGAGATTCCGGTCGTTGATGAATCGTCCGCCTCTCTGATCGAGCTCGCTTATGAGGTGTTTGGGGACTTACCCATTAAGAGAAAAGGGTCCCCTATTAAAATTTTACTCGTTTGGTCTAACTCCATGTTGGCTGAAGCTGCTAGTAAAGCCTTTCACTCTCGTTCTGCTGATCAAGTTGAACAGATAGACGTTTCTTCAGTTGATGGATTAGATGCTAGAATTCTGAATTCTAATGATGTGGCAGTGTTTTTGGGGCTAAAATCTTCTCAAATTCGAACTATAAAGACTGTTACAGATGGTTTTTATCCTAAGCCAGTGGTGATTTTCAACCCCAAATGGGCATTTGAGGAGGAGAGTGAATTTGGTGAGCTGAGTGGGTTTATTGGGTCTTTTGAGGTTATTTATTCCTTCATGGGTTTGGAAGTTCAAGGGATTTTGAACAAGAGAAAAGGGATGATTTTCAAGTGTGTGAGAAATGGGGTCTTGAGTGGTGAGCTATGGAATGTGCTTGTTGAAGAGGAAGGAGGAGAATTGAAGGCGGTTTCGAAGTTCAAGGCGCGTCCATCAATCACAGAGGTTGAGAATGTGTTGTACAATTTGATGGCCATGAACTCACCCATCACCAAGTCTGCAAAGTTCTTGAGGGATTTGGTCTCAAACGTAACTGGGAAAAAGTAAGTTTCATGTCCATGTCCATCTGCCTCCCTATTTGCCTTTAGGTCTAATCTAAAACAAATGTACTTGCTTTTGGAATGTTCTCTTTAGTTCTCCAATCCCTGTTCTTCCATTTTCTATGTGTGGCTTCTAGGAAAATTGACAACCCATTTTGAAAATGACATGAAAGTTTGCATGCATTATATGAATTAAGTTAAAATACACTATTCGTTCTGTACTTATGGCTCTTAAATTATTCTAATTCTTGTACTTCTATATTGGTTATGTCTTTGAGTTAATATTTAATTAAATATTTGATTGAGAAATAGCTTATGCCTAAATATAAGGAATTAAATGAAGTTGACATATCTCCTAAGGTGTTTCTGTTATCTGCCTATTTGTATACCTCAATAACAATAAGATTTTTGGCGATTAAACTATGGCCTCATTTGATTATTTTTCAATCTGTTTACGTTGAACCATTACATAATTCTTATGCAATTGGTTTATCATGACTCCATTTGTATAAGTGTTCTCTTTAGTAATTAGTATTTTAAGTAGAAGTGCACCTTTTTAAGACTAGTTAATGTAATTCTCAGCTTGCAATGCAAAGCCTTATATTTTCAATCTTTGTACCATAACAAAAGTACCTAAATCTACAAAAATTTGGAAATGGCATTCGGGTTTTATGTGTATAAGGAAAGAAAAAGTTACTAGTATTGAAAGATGGGAATGGAGAAAAAGATGAAGAGCAAGCAGAATCCGAAAGTAAAAGTTGCAGCTATCATCTCGTATCCCGTATCAAAGAACTCTCGTGTGTTTCTTCTTTGCATTTACAAGTAATTCTTTATCATCAGTTGAAGAAAATTTCTTCCCAACCTAGGAAGCTCTTATATGGCAGCTCTTGATAAATTTATCAGAGAAGCTGATATATTTTGTCCATAATGGCCGGAGCTGTGGAAAGGCTATCTCAAGCCATGGCTTCGCTCGGCCATTGAAGTGGATGACTCCAGCAGTCTCTGCATCAGCAAAACTTGTATTCTCTTGATACCCTAGGCCCAGCATATGCCAAAATGGATCGATGATATGAACGTGACCATGAAATGCTATAAGGCCAGGAGGCAAAGTCCCAAGCTGCCATAAACTTAGGTCCGATTTCAAGTTCTGGATAGCAAACAGTTTCCATTCAGCCCTTATGTTTGAAAATGTAGATTACATAATGTAGCAAGTGAAAATTTGATTCATGATTCAATTGAACCTTACCTGTTCAAGCCAGTGATGATATGTGAGGCTTATGTTGGTCTTTCTCCAGGCTTCAAGATCAAAGATGTTCATTCCGTAGGCCCATGCACATTCATTCGGATCAAAAGTTTCTGCTATTAAAGGATGTGAGAAGTTCAGATAGTTTTTTAATCGCTTGGACATTACAAATTTATCTTCTCCTCTACATGTTTCCACAGCTCCATTAACCTTCCCATTCATATCGATGTCCCACAAAGGTGAAAGATCAGTTTGAATCACAATGTCATCATCCAAGAACACTACCTTCTTGAGACTTGGGAACAACTGCACGCAGAATTTCCGTTCATTAGGATTCACATAGTAAAGCATCAAAGATAGATCTATTGGGAGTTTTGCCTTTAATGGAACACTTTCTTGCCAGTTTACGAGAAAAATCAAAAGAACATCTTCCTTCAGATAAAAACAAGCGTTAATTACGTTTCATAGAAAGAACTCGTTTACCTCTGGTAAATGGATACGAATGTGATTCATCACGGAATTATATTTGGGACTCAGTGCCTGCAACTTTGATGCAATGATATTAGGCTTTTCAGTCTCATTTGCAACAATGGCAGATGACCCTCCTCTGAATTGTGACCTGACCTTCTGGTCTTTTTCCATTGCTTCCAAAACTGGTACTTTACCCTTTGTAAACCAGTCAAAATGATGCAATGCCTTAACCTCAATAATTGCAGGTGATAAAGAGTGAAGGGAAAACCATGCTTGCATAGGGAAGTAAGTCTTCCTATCAGTGATTATATGGAGAACAACTTTCTGCGGGCGTAAAGCATTGTGCACGAGGGATTTGGCGACGACAGATGCAGCAAGCACATTATCAGTGGCAAGGACGAAGTGACAGTAGGAATTGTCAACGAGGGCCGGTACAAGTTCTGCTGAAGGAAGCTGGAGGCGAGCAGCTGCATTGGTTGAGTGCTCATTGGCAAGCCTGAGGGCAAGGCAATGGAGCTGCTTTGGTATGCTGCTAGATGCTACATGCCTATACAAGTATTCTTGAATTTTGGCAGTTCTGGTTCTTTGTTCCATAAGACTGACCTGCAAGATACGTATGAACTTCAAATTAATACCTTTACAATAATGAAACCTGACAAATGTAATACCTTAGCTAAGATGCTCTAAAGGATTTTAAACAATACGATTGTGGAAGTGGTGATTTGTTTCTTAAATGATTAACATATCTCCTTGAGATTGGACACTTCATTCTCCTCACACACCTAACGCTAACATAATTGGATTTAGGTGAAGGGTGTGTTTCAAGAGGTTGCCGGTTAATAATTAATAATAAACTAAGAGATGAGGGATAATAACCATTTTTCTGAGTTTGAGAGC ATGGCCTTCGATCTTCTCAAATTTCATTCCCAAATAACCGTACCTGCTAAACCCATTTTCCCTAATCTACTCCCCACCAAGAATTTCTTCCCTCTCCTTCCAGTTCCTCCCTCTCAGCTCTTCCCAAATCCCCATTTCCATGTCTCCTTCTATCTTCCTCATTCAACTCACATATCAAGAACAATCCCTTTTATACTTCATTCTTCTTTGTCTTCTTCAACCCCACCCACCTCAAAACACGATGCCATTTCCCAGGCCAAAACCTGCCTCTCTACCACACTCGAAAAGCCCCTCAACAACATTAGGTTTTCCGGTAAGATCATCAAGAAGGCAAAGCAACCCAGATTCCGTGTGGAGATTCCGGTCGTTGATGAATCGTCCGCCTCTCTGATCGAGCTCGCTTATGAGGTGTTTGGGGACTTACCCATTAAGAGAAAAGGGTCCCCTATTAAAATTTTACTCGTTTGGTCTAACTCCATGTTGGCTGAAGCTGCTAGTAAAGCCTTTCACTCTCGTTCTGCTGATCAAGTTGAACAGATAGACGTTTCTTCAGTTGATGGATTAGATGCTAGAATTCTGAATTCTAATGATGTGGCAGTGTTTTTGGGGCTAAAATCTTCTCAAATTCGAACTATAAAGACTGTTACAGATGGTTTTTATCCTAAGCCAGTGGTGATTTTCAACCCCAAATGGGCATTTGAGGAGGAGAGTGAATTTGGTGAGCTGAGTGGGTTTATTGGGTCTTTTGAGGTTATTTATTCCTTCATGGGTTTGGAAGTTCAAGGGATTTTGAACAAGAGAAAAGGGATGATTTTCAAGTGTGTGAGAAATGGGGTCTTGAGTGGTGAGCTATGGAATGTGCTTGTTGAAGAGGAAGGAGGAGAATTGAAGGCGGTTTCGAAGTTCAAGGCGCGTCCATCAATCACAGAGGTTGAGAATGTGTTGTACAATTTGATGGCCATGAACTCACCCATCACCAAGTCTGCAAAGTTCTTGAGGGATTTGGTCTCAAACGTAACTGGGAAAAAGTGA ATGGCCTTCGATCTTCTCAAATTTCATTCCCAAATAACCGTACCTGCTAAACCCATTTTCCCTAATCTACTCCCCACCAAGAATTTCTTCCCTCTCCTTCCAGTTCCTCCCTCTCAGCTCTTCCCAAATCCCCATTTCCATGTCTCCTTCTATCTTCCTCATTCAACTCACATATCAAGAACAATCCCTTTTATACTTCATTCTTCTTTGTCTTCTTCAACCCCACCCACCTCAAAACACGATGCCATTTCCCAGGCCAAAACCTGCCTCTCTACCACACTCGAAAAGCCCCTCAACAACATTAGGTTTTCCGGTAAGATCATCAAGAAGGCAAAGCAACCCAGATTCCGTGTGGAGATTCCGGTCGTTGATGAATCGTCCGCCTCTCTGATCGAGCTCGCTTATGAGGTGTTTGGGGACTTACCCATTAAGAGAAAAGGGTCCCCTATTAAAATTTTACTCGTTTGGTCTAACTCCATGTTGGCTGAAGCTGCTAGTAAAGCCTTTCACTCTCGTTCTGCTGATCAAGTTGAACAGATAGACGTTTCTTCAGTTGATGGATTAGATGCTAGAATTCTGAATTCTAATGATGTGGCAGTGTTTTTGGGGCTAAAATCTTCTCAAATTCGAACTATAAAGACTGTTACAGATGGTTTTTATCCTAAGCCAGTGGTGATTTTCAACCCCAAATGGGCATTTGAGGAGGAGAGTGAATTTGGTGAGCTGAGTGGGTTTATTGGGTCTTTTGAGGTTATTTATTCCTTCATGGGTTTGGAAGTTCAAGGGATTTTGAACAAGAGAAAAGGGATGATTTTCAAGTGTGTGAGAAATGGGGTCTTGAGTGGTGAGCTATGGAATGTGCTTGTTGAAGAGGAAGGAGGAGAATTGAAGGCGGTTTCGAAGTTCAAGGCGCGTCCATCAATCACAGAGGTTGAGAATGTGTTGTACAATTTGATGGCCATGAACTCACCCATCACCAAGTCTGCAAAGTTCTTGAGGGATTTGGTCTCAAACGTAACTGGGAAAAAGTGA MAFDLLKFHSQITVPAKPIFPNLLPTKNFFPLLPVPPSQLFPNPHFHVSFYLPHSTHISRTIPFILHSSLSSSTPPTSKHDAISQAKTCLSTTLEKPLNNIRFSGKIIKKAKQPRFRVEIPVVDESSASLIELAYEVFGDLPIKRKGSPIKILLVWSNSMLAEAASKAFHSRSADQVEQIDVSSVDGLDARILNSNDVAVFLGLKSSQIRTIKTVTDGFYPKPVVIFNPKWAFEEESEFGELSGFIGSFEVIYSFMGLEVQGILNKRKGMIFKCVRNGVLSGELWNVLVEEEGGELKAVSKFKARPSITEVENVLYNLMAMNSPITKSAKFLRDLVSNVTGKK
BLAST of CsaV3_3G005440 vs. NCBI nr
Match: XP_004152913.1 (PREDICTED: uncharacterized protein LOC101210881 [Cucumis sativus] >KGN56158.1 hypothetical protein Csa_3G081350 [Cucumis sativus]) HSP 1 Score: 671.4 bits (1731), Expect = 1.6e-189 Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0
BLAST of CsaV3_3G005440 vs. NCBI nr
Match: XP_008463445.1 (PREDICTED: uncharacterized protein LOC103501617 isoform X1 [Cucumis melo]) HSP 1 Score: 631.3 bits (1627), Expect = 1.9e-177 Identity = 327/343 (95.34%), Postives = 329/343 (95.92%), Query Frame = 0
BLAST of CsaV3_3G005440 vs. NCBI nr
Match: XP_008463446.1 (PREDICTED: uncharacterized protein LOC103501617 isoform X4 [Cucumis melo] >XP_008463447.1 PREDICTED: uncharacterized protein LOC103501617 isoform X4 [Cucumis melo] >XP_008463448.1 PREDICTED: uncharacterized protein LOC103501617 isoform X3 [Cucumis melo]) HSP 1 Score: 631.3 bits (1627), Expect = 1.9e-177 Identity = 327/343 (95.34%), Postives = 329/343 (95.92%), Query Frame = 0
BLAST of CsaV3_3G005440 vs. NCBI nr
Match: XP_008463450.1 (PREDICTED: uncharacterized protein LOC103501617 isoform X2 [Cucumis melo]) HSP 1 Score: 629.4 bits (1622), Expect = 7.2e-177 Identity = 326/342 (95.32%), Postives = 328/342 (95.91%), Query Frame = 0
BLAST of CsaV3_3G005440 vs. NCBI nr
Match: XP_022154952.1 (uncharacterized protein LOC111022097 isoform X1 [Momordica charantia]) HSP 1 Score: 528.9 bits (1361), Expect = 1.3e-146 Identity = 273/343 (79.59%), Postives = 300/343 (87.46%), Query Frame = 0
BLAST of CsaV3_3G005440 vs. TAIR10
Match: AT3G20680.1 (Domain of unknown function (DUF1995)) HSP 1 Score: 313.5 bits (802), Expect = 1.6e-85 Identity = 183/335 (54.63%), Postives = 228/335 (68.06%), Query Frame = 0
BLAST of CsaV3_3G005440 vs. TrEMBL
Match: tr|A0A0A0L318|A0A0A0L318_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G081350 PE=4 SV=1) HSP 1 Score: 671.4 bits (1731), Expect = 1.1e-189 Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 0
BLAST of CsaV3_3G005440 vs. TrEMBL
Match: tr|A0A1S3CJB0|A0A1S3CJB0_CUCME (uncharacterized protein LOC103501617 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103501617 PE=4 SV=1) HSP 1 Score: 631.3 bits (1627), Expect = 1.2e-177 Identity = 327/343 (95.34%), Postives = 329/343 (95.92%), Query Frame = 0
BLAST of CsaV3_3G005440 vs. TrEMBL
Match: tr|A0A1S3CJ86|A0A1S3CJ86_CUCME (uncharacterized protein LOC103501617 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501617 PE=4 SV=1) HSP 1 Score: 631.3 bits (1627), Expect = 1.2e-177 Identity = 327/343 (95.34%), Postives = 329/343 (95.92%), Query Frame = 0
BLAST of CsaV3_3G005440 vs. TrEMBL
Match: tr|A0A1S3CJ91|A0A1S3CJ91_CUCME (uncharacterized protein LOC103501617 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501617 PE=4 SV=1) HSP 1 Score: 629.4 bits (1622), Expect = 4.7e-177 Identity = 326/342 (95.32%), Postives = 328/342 (95.91%), Query Frame = 0
BLAST of CsaV3_3G005440 vs. TrEMBL
Match: tr|A0A2N9J0X5|A0A2N9J0X5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS59088 PE=4 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 1.6e-111 Identity = 227/350 (64.86%), Postives = 265/350 (75.71%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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