CsaV3_3G004110 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G004110
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	fasciclin-like arabinogalactan protein 1
Location	chr3 : 3488946 .. 3490567 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGAGTGATTTCCAAAGCCACATGGGACCTTGGGTTATTCATTCTCTCTTCTTCATATATTTTCTTTCACTTTTACGGGTGAGCGGATCCCTTAAAAGGTTAGGATGCTCTTCACATTCTCAACTTTTATATTTTAATACTAATTTTAATTTTTGATTAAAATTAAAATTTAGGAATTTGTATGAAAGATCGTAAGTATTCATAATTATTAATTAACTGAGAGTAATGGAATAAAAATTTGAAGAGTATAAAGCAGAATAGGCATAATTAGTAGTATTAATTATATCCCATTGCATGAGGATCCATTCATTAAGATCTCTTCCATTATTACTCCATATAGCTTAGCTTCCACTTCACTTTAGTTTCCACATGTTCCTCACCATTTCCCAAATCCTACAAACAAAAACCTCTTTTCCTCATTTTCATCTCATTTTCTCTAAACCCTAAAAATGAATCTTCTCTTCCTCTTCCTCCTCCTCCTCTTCTTCCCATCTCTCTTCATTGCCCAAACCACCACCAATTCTCCTGCCCCAGCCCCGACTACACTGGCTCTCGACTCCACCCAACTCAATCTCACGCATATCCTCTCCACCCATGGTTGCTCTGCATTTGCCCTATCCCTCCTAAGTTCCACATCGGCGGAGAAAGCCTTCAACGACGTAGTCGAGGGTGGCTTTACCGTTTTCTGCCCAAACGATGATGTTTGGAGCGAGTTTTCACCTAAGTTCAAAAACCTAACTCCACCCGCTAAAACCTCCCTCCTTGAATTCCATGGTGTCCCAATTTACATGCCGTTGCCGGTTCTGAAGTCGAATAACGGTGACACCAATACGCTGGCCACCGACGGTGCTGCTAGATTCGACTTCACGGTACAGAACGAGGGTGAGGATGTGACTGTTAAAACCAGCATTACGACGGCTAAGGTGGATGGGGCTGGTGTTTTTGATGAGGATCCATTGGTTGTTTATTTGATAGATAAAGTTTTGGAGCCGGAAGAGTTGTTTACTGCGGACGTAATGGCTCCGCCAAAGGGGGGATCGGATGTGGGAGCGGCTCCATCGTCGGATTCACCGGCAGAATCTCCGGAAGAATCTGTGGCGGATCAAAATGCTGATGGCAACTCTGGGGTTAGAGTGGAGGGTGGAGATCAGTTTCATTTCATGGCTGTAGCTTTATGTGCATGGATGGGATTTTCACTGCTGTAATTTTTTTCTTTTTTACTCTTACCAAATTGGATCATCCCCTTTGATTATCTTGCAATGAAGATTTATCTTTTATCTACTAAATAGTCATTTCTATCAAATTTTCTCATACAAATTTTAGTATTTTTGTCAAAGTTTTTAGACTATATTTTAAATTCATTCCATTTTAGTCCAAATATTTTTAATGGTTCAATTTTAATTTTTTCCCTTTTACTTTATTGCAATTGATTTAATAATAACAATAATTTTTTTTATAGTTAACATGTGAATGTATTTTCAAAATTTTAGCAAATGCTTTGGTACATAAATTTTCTTTTTAAACATCAATAGCAAATTGTATTATATATATGTATTAGATAATTAAGTTTGTTTTGTAAAATTATCTTTTGCAAACATAATCGAAAACACATGAATAATAC

mRNA sequence

ATGAATCTTCTCTTCCTCTTCCTCCTCCTCCTCTTCTTCCCATCTCTCTTCATTGCCCAAACCACCACCAATTCTCCTGCCCCAGCCCCGACTACACTGGCTCTCGACTCCACCCAACTCAATCTCACGCATATCCTCTCCACCCATGGTTGCTCTGCATTTGCCCTATCCCTCCTAAGTTCCACATCGGCGGAGAAAGCCTTCAACGACGTAGTCGAGGGTGGCTTTACCGTTTTCTGCCCAAACGATGATGTTTGGAGCGAGTTTTCACCTAAGTTCAAAAACCTAACTCCACCCGCTAAAACCTCCCTCCTTGAATTCCATGGTGTCCCAATTTACATGCCGTTGCCGGTTCTGAAGTCGAATAACGGTGACACCAATACGCTGGCCACCGACGGTGCTGCTAGATTCGACTTCACGGTACAGAACGAGGGTGAGGATGTGACTGTTAAAACCAGCATTACGACGGCTAAGGTGGATGGGGCTGGTGTTTTTGATGAGGATCCATTGGTTGTTTATTTGATAGATAAAGTTTTGGAGCCGGAAGAGTTGTTTACTGCGGACGTAATGGCTCCGCCAAAGGGGGGATCGGATGTGGGAGCGGCTCCATCGTCGGATTCACCGGCAGAATCTCCGGAAGAATCTGTGGCGGATCAAAATGCTGATGGCAACTCTGGGGTTAGAGTGGAGGGTGGAGATCAGTTTCATTTCATGGCTGTAGCTTTATGTGCATGGATGGGATTTTCACTGCTGTAA

Coding sequence (CDS)

ATGAATCTTCTCTTCCTCTTCCTCCTCCTCCTCTTCTTCCCATCTCTCTTCATTGCCCAAACCACCACCAATTCTCCTGCCCCAGCCCCGACTACACTGGCTCTCGACTCCACCCAACTCAATCTCACGCATATCCTCTCCACCCATGGTTGCTCTGCATTTGCCCTATCCCTCCTAAGTTCCACATCGGCGGAGAAAGCCTTCAACGACGTAGTCGAGGGTGGCTTTACCGTTTTCTGCCCAAACGATGATGTTTGGAGCGAGTTTTCACCTAAGTTCAAAAACCTAACTCCACCCGCTAAAACCTCCCTCCTTGAATTCCATGGTGTCCCAATTTACATGCCGTTGCCGGTTCTGAAGTCGAATAACGGTGACACCAATACGCTGGCCACCGACGGTGCTGCTAGATTCGACTTCACGGTACAGAACGAGGGTGAGGATGTGACTGTTAAAACCAGCATTACGACGGCTAAGGTGGATGGGGCTGGTGTTTTTGATGAGGATCCATTGGTTGTTTATTTGATAGATAAAGTTTTGGAGCCGGAAGAGTTGTTTACTGCGGACGTAATGGCTCCGCCAAAGGGGGGATCGGATGTGGGAGCGGCTCCATCGTCGGATTCACCGGCAGAATCTCCGGAAGAATCTGTGGCGGATCAAAATGCTGATGGCAACTCTGGGGTTAGAGTGGAGGGTGGAGATCAGTTTCATTTCATGGCTGTAGCTTTATGTGCATGGATGGGATTTTCACTGCTGTAA

Protein sequence

MNLLFLFLLLLFFPSLFIAQTTTNSPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLSSTSAEKAFNDVVEGGFTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLKSNNGDTNTLATDGAARFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLEPEELFTADVMAPPKGGSDVGAAPSSDSPAESPEESVADQNADGNSGVRVEGGDQFHFMAVALCAWMGFSLL

Homology

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BLAST of CsaV3_3G004110 vs. NCBI nr
Match: KGN56023.1 (hypothetical protein Csa_3G047840 [Cucumis sativus])

HSP 1 Score: 457.2 bits (1175), Expect = 3.6e-125
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MNLLFLFLLLLFFPSLFIAQTTTNSPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLS 60
           MNLLFLFLLLLFFPSLFIAQTTTNSPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLS
Sbjct: 1   MNLLFLFLLLLFFPSLFIAQTTTNSPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLS 60

Query: 61  STSAEKAFNDVVEGGFTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLK 120
           STSAEKAFNDVVEGGFTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLK
Sbjct: 61  STSAEKAFNDVVEGGFTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLK 120

Query: 121 SNNGDTNTLATDGAARFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLE 180
           SNNGDTNTLATDGAARFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLE
Sbjct: 121 SNNGDTNTLATDGAARFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLE 180

Query: 181 PEELFTADVMAPPKGGSDVGAAPSSDSPXXXXXXXXXXXXXXXXSGVRVEGGDQFHFMAV 240
           PEELFTADVMAPPKGGSDVGAAPSSDSPXXXXXXXXXXXXXXXXSGVRVEGGDQFHFMAV
Sbjct: 181 PEELFTADVMAPPKGGSDVGAAPSSDSPXXXXXXXXXXXXXXXXSGVRVEGGDQFHFMAV 240

Query: 241 ALCAWMGFSLL 252
           ALCAWMGFSLL
Sbjct: 241 ALCAWMGFSLL 251

[Close]

BLAST of CsaV3_3G004110 vs. NCBI nr
Match: XP_008449190.1 (PREDICTED: fasciclin-like arabinogalactan protein 1 [Cucumis melo])

HSP 1 Score: 404.1 bits (1037), Expect = 3.6e-109
Identity = 212/251 (84.46%), Postives = 224/251 (89.24%), Query Frame = 0


Query: 1   MNLLFLFLLLLFFPSLFIAQTTTNSPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLS 60
           MNL+F F LLLFFPSLF AQ TTNSP+PAP TLALDSTQLNLTHILSTHGCSAF+L+L+S
Sbjct: 1   MNLVFPF-LLLFFPSLFNAQPTTNSPSPAP-TLALDSTQLNLTHILSTHGCSAFSLALVS 60

Query: 61  STSAEKAFNDVVEGGFTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLK 120
           STSA+KAFNDVVEGG TVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPL VLK
Sbjct: 61  STSAKKAFNDVVEGGLTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLSVLK 120

Query: 121 SNNGDTNTLATDGAARFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLE 180
           SNNGDTNTLATDGAARFDFTVQN+GEDVTVKTSITTAKVDGAGVFDEDPLVVY+IDKVLE
Sbjct: 121 SNNGDTNTLATDGAARFDFTVQNDGEDVTVKTSITTAKVDGAGVFDEDPLVVYVIDKVLE 180

Query: 181 PEELFTADVMAPPKGGSDVGAAPSSDSPXXXXXXXXXXXXXXXXSGVRVEGGDQFHFMAV 240
           PEELFT DV++PPKG SDVGAAPSSD+P                S VRVEGG +FHFMAV
Sbjct: 181 PEELFTVDVVSPPKGSSDVGAAPSSDAPADSPDESLADQNADGNSAVRVEGG-EFHFMAV 240

Query: 241 ALCAWMGFSLL 252
           ALCAWMGFSLL
Sbjct: 241 ALCAWMGFSLL 248

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BLAST of CsaV3_3G004110 vs. NCBI nr
Match: XP_023539501.1 (fasciclin-like arabinogalactan protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 266.5 bits (680), Expect = 8.9e-68
Identity = 155/248 (62.50%), Postives = 183/248 (73.79%), Query Frame = 0


Query: 8   LLLLFFPSLFIAQTTTN--SPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLSSTSAE 67
           + LL FPSLF +Q T++   PAPAP     D TQ NLT +LST GC+AFA SL +ST A+
Sbjct: 6   IFLLLFPSLFNSQPTSSILPPAPAPAPTTHDPTQFNLTRLLSTAGCTAFAQSLANST-AQ 65

Query: 68  KAFNDVVEGGFTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLKSNNGD 127
           KAFNDVV+GG TVFCP+D VW  FS KFKNLT PAKTSLLEFH VPIYMPLPVLKSNNG 
Sbjct: 66  KAFNDVVQGGLTVFCPSDVVWDNFSSKFKNLTLPAKTSLLEFHAVPIYMPLPVLKSNNGV 125

Query: 128 TNTLATDGAARFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLEPEELF 187
           TNTLATDGA +FDFTVQN+G+DVT+ TS+ TAKV G G FDE PL ++L+D VLEP+ELF
Sbjct: 126 TNTLATDGADKFDFTVQNDGQDVTILTSVVTAKVGGTG-FDEAPLAIFLVDSVLEPDELF 185

Query: 188 TADVMAPP----KGGSDVGAA-PSSDSPXXXXXXXXXXXXXXXXSGVRVEGGDQFHFMAV 247
           T   +AP     K  SD+G++ PS++SP          XXXXX S VRV+GG +F+  AV
Sbjct: 186 TVHAVAPASAKVKSRSDMGSSPPSAESP--DYSPADHDXXXXXNSAVRVDGG-EFYLAAV 245

Query: 248 ALCAWMGF 249
            L  WMGF
Sbjct: 246 VLTTWMGF 248

[Close]

BLAST of CsaV3_3G004110 vs. NCBI nr
Match: XP_023005513.1 (fasciclin-like arabinogalactan protein 1 [Cucurbita maxima])

HSP 1 Score: 244.2 bits (622), Expect = 4.7e-61
Identity = 157/250 (62.80%), Postives = 182/250 (72.80%), Query Frame = 0


Query: 8   LLLLFFPSLFIAQTTTNSPAPAPTTLAL----DSTQLNLTHILSTHGCSAFALSLLSSTS 67
           + LL FPSLF +Q T +   P           D TQ NL  +LST GC+AFA SL +ST 
Sbjct: 6   IFLLLFPSLFNSQPTISILPPXXXXXXXXXTHDPTQFNLPRLLSTAGCTAFAQSLANST- 65

Query: 68  AEKAFNDVVEGGFTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLKSNN 127
           A+KAFNDVV+GG TVFCP+D VW +FS KFKNLT PAKTSLLEFH VPIYMPLPVLKSNN
Sbjct: 66  AQKAFNDVVQGGLTVFCPSDVVWDDFSSKFKNLTLPAKTSLLEFHAVPIYMPLPVLKSNN 125

Query: 128 GDTNTLATDGAARFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLEPEE 187
           G TNTLATDGA +FDFTVQN+G+DVT+ TS+ TAKV G G FDE PL ++L+D VLEP+E
Sbjct: 126 GVTNTLATDGADKFDFTVQNDGQDVTILTSVVTAKVGGTG-FDEAPLAIFLVDCVLEPDE 185

Query: 188 LFTADVMAPP----KGGSDVGAA-PSSDSPXXXXXXXXXXXXXXXXSGVRVEGGDQFHFM 247
           LF+   MAP     K  SD G++ P     XXXXXXXXXXXXXXXX  VRV+GG +F+  
Sbjct: 186 LFSVHAMAPASPKVKSRSDTGSSPPXXXXXXXXXXXXXXXXXXXXXXAVRVDGG-EFYLA 245

Query: 248 AVALCAWMGF 249
           AV L  WMGF
Sbjct: 246 AVVLTTWMGF 252

[Close]

BLAST of CsaV3_3G004110 vs. NCBI nr
Match: XP_022951005.1 (fasciclin-like arabinogalactan protein 1 [Cucurbita moschata])

HSP 1 Score: 232.6 bits (592), Expect = 1.4e-57
Identity = 142/250 (56.80%), Postives = 171/250 (68.40%), Query Frame = 0


Query: 8   LLLLFFPSLFIAQTTTNSPAP----APTTLALDSTQLNLTHILSTHGCSAFALSLLSSTS 67
           + LL FPSLF +Q T++   P                      ST GC+AFA +L +ST 
Sbjct: 6   IFLLLFPSLFNSQPTSSILPPXXXXXXXXXXXXXXXXXXXXXXSTAGCTAFAQALANST- 65

Query: 68  AEKAFNDVVEGGFTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLKSNN 127
           A+KAFNDVV+GG TVFCP+D VW  FS KFKNLT PAKTSLLEFH VPIYMPLPVLKSNN
Sbjct: 66  AQKAFNDVVQGGLTVFCPSDVVWDNFSSKFKNLTLPAKTSLLEFHAVPIYMPLPVLKSNN 125

Query: 128 GDTNTLATDGAARFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLEPEE 187
           G TNTLATDGA +FDFTVQN+G+DVT+ TS+ TAKV G G FDE PL ++L+D VLEP+E
Sbjct: 126 GVTNTLATDGADKFDFTVQNDGQDVTILTSVVTAKVGGTG-FDEAPLAIFLVDCVLEPDE 185

Query: 188 LFTADVMAPP----KGGSDVGAA-PSSDSPXXXXXXXXXXXXXXXXSGVRVEGGDQFHFM 247
           LF+   +AP     K  SD+G++ PS++SP          XXXXX S VRV+GG +F+  
Sbjct: 186 LFSVHAVAPASAKVKSRSDMGSSPPSAESP--DYSPADHDXXXXXNSAVRVDGG-EFYLA 245

Query: 248 AVALCAWMGF 249
           AV L  WMGF
Sbjct: 246 AVVLTTWMGF 250

[Close]

BLAST of CsaV3_3G004110 vs. TAIR10
Match: AT4G12730.1 (FASCICLIN-like arabinogalactan 2)

HSP 1 Score: 170.2 bits (430), Expect = 1.6e-42
Identity = 90/172 (52.33%), Postives = 119/172 (69.19%), Query Frame = 0


Query: 16  LFIAQTTTNSPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLSSTSAEKAFNDVVEGG 75
           L I+Q  T+  A APT    D   L LT IL   GC AF+  +L ST A+K F D V+GG
Sbjct: 168 LHISQVLTSPEAEAPTASPSD---LILTTILEKQGCKAFS-DILKSTGADKTFQDTVDGG 227

Query: 76  FTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLKSNNGDTNTLATDGAA 135
            TVFCP+D    +F PKFK+L+P  KT+L+ +HG+P+Y  L +L+S NG  NTLAT+G  
Sbjct: 228 LTVFCPSDSAVGKFMPKFKSLSPANKTALVLYHGMPVYQSLQMLRSGNGAVNTLATEGNN 287

Query: 136 RFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLEPEELFTA 188
           +FDFTVQN+GEDVT++T + TAKV G  + D++PL+VY IDKVL P E++ A
Sbjct: 288 KFDFTVQNDGEDVTLETDVVTAKVMGT-LKDQEPLIVYKIDKVLLPREIYKA 334

[Close]

BLAST of CsaV3_3G004110 vs. TAIR10
Match: AT5G55730.1 (FASCICLIN-like arabinogalactan 1)

HSP 1 Score: 166.4 bits (420), Expect = 2.3e-41
Identity = 86/176 (48.86%), Postives = 111/176 (63.07%), Query Frame = 0


Query: 15  SLFIAQTTTNSPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLSSTSAEKAFNDVVEG 74
           S  +   T  +P PAP        ++NLT I+S HGC  FA +LL++  A K + + +EG
Sbjct: 167 SRVLPSETAAAPTPAP-------AEMNLTGIMSAHGCKVFAETLLTNPGASKTYQESLEG 226

Query: 75  GFTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLKSNNGDTNTLATDGA 134
           G TVFCP DD    F PK+KNLT P K + L+F  VP Y  + +LKSNNG  NTLATDGA
Sbjct: 227 GMTVFCPGDDAMKGFLPKYKNLTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMNTLATDGA 286

Query: 135 ARFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLEPEELFTADVM 191
            +F+ TVQN+GE VT+KT I T K+    + DE PL +Y  DKVL P+ELF A  +
Sbjct: 287 NKFELTVQNDGEKVTLKTRINTVKIVDT-LIDEQPLAIYATDKVLLPKELFKASAV 334

[Close]

BLAST of CsaV3_3G004110 vs. TAIR10
Match: AT3G60900.1 (FASCICLIN-like arabinogalactan-protein 10)

HSP 1 Score: 103.2 bits (256), Expect = 2.4e-22
Identity = 61/160 (38.12%), Postives = 90/160 (56.25%), Query Frame = 0


Query: 27  APAPTTLALDSTQLNLTHILSTHGCSAFALSLLSSTSAEKAFNDVVEGGFTVFCPNDDVW 86
           APAP++  +     N+T +L   GC  FA +LL S+   K F   VE G TVF P+D+ +
Sbjct: 180 APAPSSAGVS----NITGLLEKAGCKTFA-NLLVSSGVIKTFESTVEKGLTVFAPSDEAF 239

Query: 87  -SEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLKSNNGDTNTLATDGAARFDFTVQNEG 146
            +   P   NLT     SLLE+H +  Y P   LK+N    +TLAT+GA ++D T    G
Sbjct: 240 KARGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDLTTSTSG 299

Query: 147 EDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLEPEELF 186
           ++V + T +  +++    V DE P+V++ +D VL P ELF
Sbjct: 300 DEVILHTGVGPSRLADT-VVDETPVVIFTVDNVLLPAELF 333

[Close]

BLAST of CsaV3_3G004110 vs. TAIR10
Match: AT2G45470.1 (FASCICLIN-like arabinogalactan protein 8)

HSP 1 Score: 101.7 bits (252), Expect = 6.9e-22
Identity = 60/160 (37.50%), Postives = 90/160 (56.25%), Query Frame = 0


Query: 27  APAPTTLALDSTQLNLTHILSTHGCSAFALSLLSSTSAEKAFNDVVEGGFTVFCPNDDVW 86
           APAP+     ++  N+T +L   GC  FA +LL S+   K +   VE G TVF P+D+ +
Sbjct: 180 APAPS-----ASLSNITGLLEKAGCKTFA-NLLVSSGVLKTYESAVEKGLTVFAPSDEAF 239

Query: 87  -SEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLKSNNGDTNTLATDGAARFDFTVQNEG 146
            +E  P    LT     SLLE+H +  Y P   LK+N  + +TLAT+GA +FD T    G
Sbjct: 240 KAEGVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDLTTSTSG 299

Query: 147 EDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLEPEELF 186
           ++V + T +  +++    V D  P+V++ +D VL P ELF
Sbjct: 300 DEVILHTGVAPSRLADT-VLDATPVVIFTVDNVLLPAELF 332

[Close]

BLAST of CsaV3_3G004110 vs. TAIR10
Match: AT2G20520.1 (FASCICLIN-like arabinogalactan 6)

HSP 1 Score: 66.6 bits (161), Expect = 2.5e-11
Identity = 60/190 (31.58%), Postives = 94/190 (49.47%), Query Frame = 0


Query: 4   LFLFLLLLFFPSLFIAQTTTNSP-APAPTTLALDSTQLNLTHILSTHGCSAFALSLLSST 63
           LF +++LL F  LF      + P APAPTT   + + +NLT IL         + LL++T
Sbjct: 5   LFSYVVLLIF--LFTIPYIQSQPTAPAPTT---EKSPINLTAILEAGHQFTTLIQLLNTT 64

Query: 64  SAEKAFN---DVVEGGFTVFCPNDDVWSEFSP-KFKNLTPPAKTSLLEFHGVPIYMPLP- 123
                 +   +  + G T+F P D+ +++  P    +LT   +  L+ +H +P Y  L  
Sbjct: 65  QVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSD 124

Query: 124 -VLKSNNGDTNTLATDGAA-RFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLI 183
            +L SN   T     DG     +FT Q +   V V T +   +++ A +  + PL VY++
Sbjct: 125 LLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNA-LRQQFPLAVYVV 184

Query: 184 DKVLEPEELF 186
           D VL PEELF
Sbjct: 185 DSVLLPEELF 188

[Close]

BLAST of CsaV3_3G004110 vs. Swiss-Prot
Match: sp|Q9SU13|FLA2_ARATH (Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.8e-41
Identity = 90/172 (52.33%), Postives = 119/172 (69.19%), Query Frame = 0


Query: 16  LFIAQTTTNSPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLSSTSAEKAFNDVVEGG 75
           L I+Q  T+  A APT    D   L LT IL   GC AF+  +L ST A+K F D V+GG
Sbjct: 168 LHISQVLTSPEAEAPTASPSD---LILTTILEKQGCKAFS-DILKSTGADKTFQDTVDGG 227

Query: 76  FTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLKSNNGDTNTLATDGAA 135
            TVFCP+D    +F PKFK+L+P  KT+L+ +HG+P+Y  L +L+S NG  NTLAT+G  
Sbjct: 228 LTVFCPSDSAVGKFMPKFKSLSPANKTALVLYHGMPVYQSLQMLRSGNGAVNTLATEGNN 287

Query: 136 RFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLEPEELFTA 188
           +FDFTVQN+GEDVT++T + TAKV G  + D++PL+VY IDKVL P E++ A
Sbjct: 288 KFDFTVQNDGEDVTLETDVVTAKVMGT-LKDQEPLIVYKIDKVLLPREIYKA 334

[Close]

BLAST of CsaV3_3G004110 vs. Swiss-Prot
Match: sp|Q9FM65|FLA1_ARATH (Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLA1 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.1e-40
Identity = 86/176 (48.86%), Postives = 111/176 (63.07%), Query Frame = 0


Query: 15  SLFIAQTTTNSPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLSSTSAEKAFNDVVEG 74
           S  +   T  +P PAP        ++NLT I+S HGC  FA +LL++  A K + + +EG
Sbjct: 167 SRVLPSETAAAPTPAP-------AEMNLTGIMSAHGCKVFAETLLTNPGASKTYQESLEG 226

Query: 75  GFTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLKSNNGDTNTLATDGA 134
           G TVFCP DD    F PK+KNLT P K + L+F  VP Y  + +LKSNNG  NTLATDGA
Sbjct: 227 GMTVFCPGDDAMKGFLPKYKNLTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMNTLATDGA 286

Query: 135 ARFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLEPEELFTADVM 191
            +F+ TVQN+GE VT+KT I T K+    + DE PL +Y  DKVL P+ELF A  +
Sbjct: 287 NKFELTVQNDGEKVTLKTRINTVKIVDT-LIDEQPLAIYATDKVLLPKELFKASAV 334

[Close]

BLAST of CsaV3_3G004110 vs. Swiss-Prot
Match: sp|Q9LZX4|FLA10_ARATH (Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana OX=3702 GN=FLA10 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.3e-21
Identity = 61/160 (38.12%), Postives = 90/160 (56.25%), Query Frame = 0


Query: 27  APAPTTLALDSTQLNLTHILSTHGCSAFALSLLSSTSAEKAFNDVVEGGFTVFCPNDDVW 86
           APAP++  +     N+T +L   GC  FA +LL S+   K F   VE G TVF P+D+ +
Sbjct: 180 APAPSSAGVS----NITGLLEKAGCKTFA-NLLVSSGVIKTFESTVEKGLTVFAPSDEAF 239

Query: 87  -SEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLKSNNGDTNTLATDGAARFDFTVQNEG 146
            +   P   NLT     SLLE+H +  Y P   LK+N    +TLAT+GA ++D T    G
Sbjct: 240 KARGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDLTTSTSG 299

Query: 147 EDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLEPEELF 186
           ++V + T +  +++    V DE P+V++ +D VL P ELF
Sbjct: 300 DEVILHTGVGPSRLADT-VVDETPVVIFTVDNVLLPAELF 333

[Close]

BLAST of CsaV3_3G004110 vs. Swiss-Prot
Match: sp|O22126|FLA8_ARATH (Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana OX=3702 GN=FLA8 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20
Identity = 60/160 (37.50%), Postives = 90/160 (56.25%), Query Frame = 0


Query: 27  APAPTTLALDSTQLNLTHILSTHGCSAFALSLLSSTSAEKAFNDVVEGGFTVFCPNDDVW 86
           APAP+     ++  N+T +L   GC  FA +LL S+   K +   VE G TVF P+D+ +
Sbjct: 180 APAPS-----ASLSNITGLLEKAGCKTFA-NLLVSSGVLKTYESAVEKGLTVFAPSDEAF 239

Query: 87  -SEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLKSNNGDTNTLATDGAARFDFTVQNEG 146
            +E  P    LT     SLLE+H +  Y P   LK+N  + +TLAT+GA +FD T    G
Sbjct: 240 KAEGVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDLTTSTSG 299

Query: 147 EDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLEPEELF 186
           ++V + T +  +++    V D  P+V++ +D VL P ELF
Sbjct: 300 DEVILHTGVAPSRLADT-VLDATPVVIFTVDNVLLPAELF 332

[Close]

BLAST of CsaV3_3G004110 vs. Swiss-Prot
Match: sp|Q9SIL7|FLA6_ARATH (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6 PE=2 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 4.4e-10
Identity = 60/190 (31.58%), Postives = 94/190 (49.47%), Query Frame = 0


Query: 4   LFLFLLLLFFPSLFIAQTTTNSP-APAPTTLALDSTQLNLTHILSTHGCSAFALSLLSST 63
           LF +++LL F  LF      + P APAPTT   + + +NLT IL         + LL++T
Sbjct: 5   LFSYVVLLIF--LFTIPYIQSQPTAPAPTT---EKSPINLTAILEAGHQFTTLIQLLNTT 64

Query: 64  SAEKAFN---DVVEGGFTVFCPNDDVWSEFSP-KFKNLTPPAKTSLLEFHGVPIYMPLP- 123
                 +   +  + G T+F P D+ +++  P    +LT   +  L+ +H +P Y  L  
Sbjct: 65  QVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSD 124

Query: 124 -VLKSNNGDTNTLATDGAA-RFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLI 183
            +L SN   T     DG     +FT Q +   V V T +   +++ A +  + PL VY++
Sbjct: 125 LLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNA-LRQQFPLAVYVV 184

Query: 184 DKVLEPEELF 186
           D VL PEELF
Sbjct: 185 DSVLLPEELF 188

[Close]

BLAST of CsaV3_3G004110 vs. TrEMBL
Match: tr|A0A0A0L2T3|A0A0A0L2T3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G047840 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 2.4e-125
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MNLLFLFLLLLFFPSLFIAQTTTNSPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLS 60
           MNLLFLFLLLLFFPSLFIAQTTTNSPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLS
Sbjct: 1   MNLLFLFLLLLFFPSLFIAQTTTNSPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLS 60

Query: 61  STSAEKAFNDVVEGGFTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLK 120
           STSAEKAFNDVVEGGFTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLK
Sbjct: 61  STSAEKAFNDVVEGGFTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLK 120

Query: 121 SNNGDTNTLATDGAARFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLE 180
           SNNGDTNTLATDGAARFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLE
Sbjct: 121 SNNGDTNTLATDGAARFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLE 180

Query: 181 PEELFTADVMAPPKGGSDVGAAPSSDSPXXXXXXXXXXXXXXXXSGVRVEGGDQFHFMAV 240
           PEELFTADVMAPPKGGSDVGAAPSSDSPXXXXXXXXXXXXXXXXSGVRVEGGDQFHFMAV
Sbjct: 181 PEELFTADVMAPPKGGSDVGAAPSSDSPXXXXXXXXXXXXXXXXSGVRVEGGDQFHFMAV 240

Query: 241 ALCAWMGFSLL 252
           ALCAWMGFSLL
Sbjct: 241 ALCAWMGFSLL 251

[Close]

BLAST of CsaV3_3G004110 vs. TrEMBL
Match: tr|A0A1S3BMD9|A0A1S3BMD9_CUCME (fasciclin-like arabinogalactan protein 1 OS=Cucumis melo OX=3656 GN=LOC103491141 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 2.4e-109
Identity = 212/251 (84.46%), Postives = 224/251 (89.24%), Query Frame = 0


Query: 1   MNLLFLFLLLLFFPSLFIAQTTTNSPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLS 60
           MNL+F F LLLFFPSLF AQ TTNSP+PAP TLALDSTQLNLTHILSTHGCSAF+L+L+S
Sbjct: 1   MNLVFPF-LLLFFPSLFNAQPTTNSPSPAP-TLALDSTQLNLTHILSTHGCSAFSLALVS 60

Query: 61  STSAEKAFNDVVEGGFTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLK 120
           STSA+KAFNDVVEGG TVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPL VLK
Sbjct: 61  STSAKKAFNDVVEGGLTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLSVLK 120

Query: 121 SNNGDTNTLATDGAARFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLE 180
           SNNGDTNTLATDGAARFDFTVQN+GEDVTVKTSITTAKVDGAGVFDEDPLVVY+IDKVLE
Sbjct: 121 SNNGDTNTLATDGAARFDFTVQNDGEDVTVKTSITTAKVDGAGVFDEDPLVVYVIDKVLE 180

Query: 181 PEELFTADVMAPPKGGSDVGAAPSSDSPXXXXXXXXXXXXXXXXSGVRVEGGDQFHFMAV 240
           PEELFT DV++PPKG SDVGAAPSSD+P                S VRVEGG +FHFMAV
Sbjct: 181 PEELFTVDVVSPPKGSSDVGAAPSSDAPADSPDESLADQNADGNSAVRVEGG-EFHFMAV 240

Query: 241 ALCAWMGFSLL 252
           ALCAWMGFSLL
Sbjct: 241 ALCAWMGFSLL 248

[Close]

BLAST of CsaV3_3G004110 vs. TrEMBL
Match: tr|A0A2I4E146|A0A2I4E146_9ROSI (fasciclin-like arabinogalactan protein 1 OS=Juglans regia OX=51240 GN=LOC108985311 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 4.1e-45
Identity = 95/171 (55.56%), Postives = 124/171 (72.51%), Query Frame = 0


Query: 18  IAQTTTNSPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLSSTSAEKAFNDVVEGGFT 77
           I++   +  A APT       ++NLT I+S HGC  FA +L++++ AEK F + ++GG T
Sbjct: 175 ISKILPSDVAAAPTP---GPAEVNLTGIMSAHGCKVFADTLIANSDAEKTFQESLDGGLT 234

Query: 78  VFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLKSNNGDTNTLATDGAARF 137
            FCP DDV+  F PKFKNLT   KTSLLEFHGVP+YM +P+LKSNNG  NTLATDG  +F
Sbjct: 235 AFCPLDDVFKAFLPKFKNLTASGKTSLLEFHGVPVYMSMPMLKSNNGIMNTLATDGVKKF 294

Query: 138 DFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLEPEELFTAD 189
           DFTVQN+GE+VT+KT I TA++ G  + DE P+ +Y IDKVL P+ELF A+
Sbjct: 295 DFTVQNDGEEVTLKTKIVTARITGT-LLDEQPVSIYTIDKVLMPKELFKAE 341

[Close]

BLAST of CsaV3_3G004110 vs. TrEMBL
Match: tr|A0A2R6P548|A0A2R6P548_ACTCH (Fasciclin-like arabinogalactan protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc33391 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.6e-44
Identity = 97/172 (56.40%), Postives = 123/172 (71.51%), Query Frame = 0


Query: 16  LFIAQTTTNSPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLSSTSAEKAFNDVVEGG 75
           + I++      A APT      +QLNLT  +S HGC  FA +LL+S  AEK FND ++GG
Sbjct: 167 IHISKILPTPEAEAPTP---GPSQLNLTSAMSAHGCRVFAETLLAS-DAEKTFNDNLDGG 226

Query: 76  FTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLKSNNGDTNTLATDGAA 135
            TVFCP DD +  F PK+KNLT   K SL+EFHG+P+Y  L +LKSNNG TNTLATDGA+
Sbjct: 227 LTVFCPGDDAFKNFLPKYKNLTAEGKQSLMEFHGIPVYQSLAMLKSNNGLTNTLATDGAS 286

Query: 136 RFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLEPEELFTA 188
           +FDFTVQN+GE+VT+KT + TAK+ G  + DE P+ +Y IDKVL P+ELF A
Sbjct: 287 KFDFTVQNDGEEVTLKTKLVTAKITGT-LMDEQPVAIYTIDKVLLPKELFKA 333

[Close]

BLAST of CsaV3_3G004110 vs. TrEMBL
Match: tr|A0A1S4BC16|A0A1S4BC16_TOBAC (fasciclin-like arabinogalactan protein 1 OS=Nicotiana tabacum OX=4097 GN=LOC107806676 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 7.8e-44
Identity = 95/173 (54.91%), Postives = 118/173 (68.21%), Query Frame = 0


Query: 15  SLFIAQTTTNSPAPAPTTLALDSTQLNLTHILSTHGCSAFALSLLSSTSAEKAFNDVVEG 74
           S  +      +P P P       +Q+NLT ++S HGC  FA +LL+S  AEK F D V+G
Sbjct: 170 STILPSAEAEAPTPGP-------SQMNLTSLMSAHGCKVFAETLLAS-PAEKTFEDNVDG 229

Query: 75  GFTVFCPNDDVWSEFSPKFKNLTPPAKTSLLEFHGVPIYMPLPVLKSNNGDTNTLATDGA 134
           G T+FCP DD    FSPKFKNLT   K SLLE+HGVPIY  +  LKSNNG  NTLATDGA
Sbjct: 230 GLTIFCPGDDAMKNFSPKFKNLTAEGKQSLLEYHGVPIYQSISSLKSNNGVMNTLATDGA 289

Query: 135 ARFDFTVQNEGEDVTVKTSITTAKVDGAGVFDEDPLVVYLIDKVLEPEELFTA 188
            ++DFTVQN+GEDVT+KT + TAK+ G  + DE PL ++ +DKVL P+ELF A
Sbjct: 290 KKYDFTVQNDGEDVTLKTKVVTAKITGT-LVDEQPLAIFSLDKVLLPKELFKA 333

The following BLAST results are available for this feature:

BLAST of CsaV3_3G004110 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56023.1	3.6e-125	100.00	hypothetical protein Csa_3G047840 [Cucumis sativus]	[more]
XP_008449190.1	3.6e-109	84.46	PREDICTED: fasciclin-like arabinogalactan protein 1 [Cucumis melo]	[more]
XP_023539501.1	8.9e-68	62.50	fasciclin-like arabinogalactan protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_023005513.1	4.7e-61	62.80	fasciclin-like arabinogalactan protein 1 [Cucurbita maxima]	[more]
XP_022951005.1	1.4e-57	56.80	fasciclin-like arabinogalactan protein 1 [Cucurbita moschata]	[more]

BLAST of CsaV3_3G004110 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G12730.1	1.6e-42	52.33	FASCICLIN-like arabinogalactan 2	[more]
AT5G55730.1	2.3e-41	48.86	FASCICLIN-like arabinogalactan 1	[more]
AT3G60900.1	2.4e-22	38.13	FASCICLIN-like arabinogalactan-protein 10	[more]
AT2G45470.1	6.9e-22	37.50	FASCICLIN-like arabinogalactan protein 8	[more]
AT2G20520.1	2.5e-11	31.58	FASCICLIN-like arabinogalactan 6	[more]

BLAST of CsaV3_3G004110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SU13\|FLA2_ARATH	2.8e-41	52.33	Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2...	[more]
sp\|Q9FM65\|FLA1_ARATH	4.1e-40	48.86	Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLA1...	[more]
sp\|Q9LZX4\|FLA10_ARATH	4.3e-21	38.13	Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
sp\|O22126\|FLA8_ARATH	1.2e-20	37.50	Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana OX=3702 GN=FLA8...	[more]
sp\|Q9SIL7\|FLA6_ARATH	4.4e-10	31.58	Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6...	[more]

BLAST of CsaV3_3G004110 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L2T3\|A0A0A0L2T3_CUCSA	2.4e-125	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G047840 PE=4 SV=1	[more]
tr\|A0A1S3BMD9\|A0A1S3BMD9_CUCME	2.4e-109	84.46	fasciclin-like arabinogalactan protein 1 OS=Cucumis melo OX=3656 GN=LOC103491141...	[more]
tr\|A0A2I4E146\|A0A2I4E146_9ROSI	4.1e-45	55.56	fasciclin-like arabinogalactan protein 1 OS=Juglans regia OX=51240 GN=LOC1089853...	[more]
tr\|A0A2R6P548\|A0A2R6P548_ACTCH	1.6e-44	56.40	Fasciclin-like arabinogalactan protein OS=Actinidia chinensis var. chinensis OX=...	[more]
tr\|A0A1S4BC16\|A0A1S4BC16_TOBAC	7.8e-44	54.91	fasciclin-like arabinogalactan protein 1 OS=Nicotiana tabacum OX=4097 GN=LOC1078...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR033254	Plant_FLA
IPR036378	FAS1_dom_sf
IPR000782	FAS1_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0071944	cell periphery
cellular_component	GO:0016020	membrane
cellular_component	GO:0044464	cell part
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G004110.1	CsaV3_3G004110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 77..182 e-value: 2.3E-13 score: 60.4
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 56..181 e-value: 8.4E-13 score: 48.6
IPR000782	FAS1 domain	PROSITE	PS50213	FAS1	coord: 39..179 score: 10.612
IPR036378	FAS1 domain superfamily	GENE3D	G3DSA:2.30.180.10		coord: 32..184 e-value: 5.7E-8 score: 35.1
IPR036378	FAS1 domain superfamily	SUPERFAMILY	SSF82153	FAS1 domain	coord: 38..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..222
None	No IPR available	PANTHER	PTHR32382:SF4	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1	coord: 22..250
IPR033254	Fasciclin-like arabinogalactan protein	PANTHER	PTHR32382	FAMILY NOT NAMED	coord: 22..250

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G004110	CSPI03G04120	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G004110	Cucsa.042040	Cucumber (Gy14) v1	cgycucB017
CsaV3_3G004110	CmaCh06G006750	Cucurbita maxima (Rimu)	cmacucB0975
CsaV3_3G004110	CmoCh06G006850	Cucurbita moschata (Rifu)	cmocucB0961
CsaV3_3G004110	Cp4.1LG08g08280	Cucurbita pepo (Zucchini)	cpecucB1047
CsaV3_3G004110	CsGy3G004120	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G004110	Carg23543	Silver-seed gourd	carcucB0008
CsaV3_3G004110	Cla004464	Watermelon (97103) v1	cucwmB210
CsaV3_3G004110	MELO3C014107	Melon (DHL92) v3.5.1	cucmeB246
CsaV3_3G004110	ClCG10G004330	Watermelon (Charleston Gray)	cucwcgB194
CsaV3_3G004110	Lsi05G004980	Bottle gourd (USVL1VR-Ls)	cuclsiB217
CsaV3_3G004110	MELO3C014107.2	Melon (DHL92) v3.6.1	cucmedB231
CsaV3_3G004110	Cla97C10G188760	Watermelon (97103) v2	cucwmbB182
CsaV3_3G004110	Bhi11G000363	Wax gourd	cucwgoB223

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G004110	Wax gourd	cucwgoB328
CsaV3_3G004110	Silver-seed gourd	carcucB0621
CsaV3_3G004110	Cucurbita maxima (Rimu)	cmacucB0381
CsaV3_3G004110	Cucurbita maxima (Rimu)	cmacucB0659
CsaV3_3G004110	Cucurbita moschata (Rifu)	cmocucB0378
CsaV3_3G004110	Cucurbita pepo (Zucchini)	cpecucB0256
CsaV3_3G004110	Cucurbita pepo (Zucchini)	cpecucB0342
CsaV3_3G004110	Bottle gourd (USVL1VR-Ls)	cuclsiB175