CsaV3_3G002920 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G002920
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Location	chr3 : 2383341 .. 2384096 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCCTACTTCATAAACAAAAACCATTTCACTCCAAACAGTTTCACTTTTCTTCTTCTCTTCAAAAAAAAAAAAAAAAGAAAAGAAAAATGTCTTCCTCCGACAAATCCTTTTCACTTGCTCTCTTCTTCTGTCTCAACCTAATTCTCTTCTCTTCTCTTGCCATTGCTCAACCAATTGTACCAGAGTCGAGCCCGACCACCAATTGCTCCGGCAATGTAAGTGCGTGTGCAAGTGTAATTGGTTTTATTACTGTATCCGCTGGCTCTCAGGAACCCGTACGTCCATGTTGTGATTTGATTCAAGGGCTAGTAGCTACTAATGCTAAGATTTGTTTAAACTTGGCCCTAGATCTTGCAGTAGATATTAATCCAATCTCTGTCAACACATCCGTTGAGGCCATGCTCGATATATTGGTTAACACATGCAATAATTGAACTCTAATCGTCTAATTCAGTCTGTACAACTTCAAAATGAGAGAATAAAATAAGAAGTTGTAATACTTTATTTTATGTCTGCACCTATGTTTTTTAAGTTCCATAAGTTTGAAGCCGAAGTTTGGAGGTTAGGATTGAAAGACCGTCAACCCTAGAGTTGAAGGTACATAGATATGCATATATCTTAACCATTACACTATACTCTTCTTCATCTTTTATTTTCATGTAATTTGGCAAGCTATTATGAAATTAAACTAATGTTGTCATACGTGTTTACTTATATTTATCAATATATAAAAACATGTTGTTTATCTAACATA

mRNA sequence

ATGTCTTCCTCCGACAAATCCTTTTCACTTGCTCTCTTCTTCTGTCTCAACCTAATTCTCTTCTCTTCTCTTGCCATTGCTCAACCAATTGTACCAGAGTCGAGCCCGACCACCAATTGCTCCGGCAATGTAAGTGCGTGTGCAAGTGTAATTGGTTTTATTACTGTATCCGCTGGCTCTCAGGAACCCGTACGTCCATGTTGTGATTTGATTCAAGGGCTAGTAGCTACTAATGCTAAGATTTGTTTAAACTTGGCCCTAGATCTTGCAGTAGATATTAATCCAATCTCTGTCAACACATCCGTTGAGGCCATGCTCGATATATTGGTTAACACATGCAATAATTGA

Coding sequence (CDS)

ATGTCTTCCTCCGACAAATCCTTTTCACTTGCTCTCTTCTTCTGTCTCAACCTAATTCTCTTCTCTTCTCTTGCCATTGCTCAACCAATTGTACCAGAGTCGAGCCCGACCACCAATTGCTCCGGCAATGTAAGTGCGTGTGCAAGTGTAATTGGTTTTATTACTGTATCCGCTGGCTCTCAGGAACCCGTACGTCCATGTTGTGATTTGATTCAAGGGCTAGTAGCTACTAATGCTAAGATTTGTTTAAACTTGGCCCTAGATCTTGCAGTAGATATTAATCCAATCTCTGTCAACACATCCGTTGAGGCCATGCTCGATATATTGGTTAACACATGCAATAATTGA

Protein sequence

MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVNTCNN

Homology

[Close]

BLAST of CsaV3_3G002920 vs. NCBI nr
Match: KGN55884.1 (hypothetical protein Csa_3G026690 [Cucumis sativus])

HSP 1 Score: 219.5 bits (558), Expect = 5.8e-54
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGS 60
           MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGS
Sbjct: 1   MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGS 60

Query: 61  QEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVNTCNN 116
           QEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVNTCNN
Sbjct: 61  QEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVNTCNN 115

[Close]

BLAST of CsaV3_3G002920 vs. NCBI nr
Match: XP_011652719.1 (PREDICTED: putative lipid-binding protein AIR1B [Cucumis sativus] >KGN55885.1 hypothetical protein Csa_3G027190 [Cucumis sativus])

HSP 1 Score: 113.6 bits (283), Expect = 4.5e-22
Identity = 68/118 (57.63%), Postives = 85/118 (72.03%), Query Frame = 0


Query: 1   MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGS 60
           MSSS+KSFSLALFFCLNLILFSSLAIAQPIVP SSPT NCS NV  CASV+  + ++ G 
Sbjct: 1   MSSSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPTPNCSRNVRVCASVLNIVNLTIG- 60

Query: 61  QEPVRPCCDLIQGLVATNAKICLNLAL--DLAVDINPI-SVNTSVEA-MLDILVNTCN 115
            + + PCC LIQGL A    IC+  A+  +L   ++ +  VN SVE+ +L IL++ CN
Sbjct: 61  -QNLGPCCQLIQGLAAAEVDICIQTAISNELRASLSGLPPVNLSVESFVLRILLSRCN 116

[Close]

BLAST of CsaV3_3G002920 vs. NCBI nr
Match: XP_022759927.1 (14 kDa proline-rich protein DC2.15-like isoform X2 [Durio zibethinus])

HSP 1 Score: 66.2 bits (160), Expect = 8.1e-08
Identity = 45/112 (40.18%), Postives = 62/112 (55.36%), Query Frame = 0


Query: 3   SSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQE 62
           +S KS SLALFF LN ILF SL  A+   P  +        +  CA V+G + V+ GS  
Sbjct: 2   ASKKSASLALFFALN-ILFFSLVSARGKCPRDAL------KLGVCADVLGLVNVTIGS-P 61

Query: 63  PVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVNTCN 115
           PV+PCC LIQGL    A +C    L  A+  N + +N ++   L +L+N C+
Sbjct: 62  PVQPCCSLIQGLADLEAAVC----LCTAIKANILGINLNIPVSLSLLLNVCS 101

[Close]

BLAST of CsaV3_3G002920 vs. NCBI nr
Match: PPS11411.1 (hypothetical protein GOBAR_AA09228 [Gossypium barbadense])

HSP 1 Score: 60.8 bits (146), Expect = 3.4e-06
Identity = 41/112 (36.61%), Postives = 61/112 (54.46%), Query Frame = 0


Query: 3   SSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQE 62
           +S ++ SLALFF LN +LF SL  A    P+ +        +  CA V+G + V+ GS  
Sbjct: 2   ASKRTASLALFFALN-VLFFSLVSACGKCPQDTL------KLGVCAEVLGLVNVTVGS-P 61

Query: 63  PVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVNTCN 115
           P +PCC L+QGL    A +CL  AL      N + +N ++   L +L+N C+
Sbjct: 62  PGQPCCSLLQGLADLEAAVCLCTAL----KANVLGINLNIPVSLSLLLNVCS 101

[Close]

BLAST of CsaV3_3G002920 vs. NCBI nr
Match: XP_012475941.1 (PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii] >KJB21391.1 hypothetical protein B456_004G199900 [Gossypium raimondii])

HSP 1 Score: 57.4 bits (137), Expect = 3.8e-05
Identity = 44/127 (34.65%), Postives = 61/127 (48.03%), Query Frame = 0


Query: 3   SSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSG---------------NVSAC 62
           +S +S SLALFF LN ILF SL  A    P                          +  C
Sbjct: 2   ASKRSASLALFFALN-ILFFSLVSACDSCPXXXXXXXXXXXXXXXXXXXCPRDALKLGVC 61

Query: 63  ASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLD 115
           A+V+G + V+ GS  PV+PCC L+QGL    A +C    L  A+  N + +N +V   L 
Sbjct: 62  ANVLGLVNVTIGS-PPVQPCCSLLQGLADLEAAVC----LCTAIKANVLGINLNVPVSLS 121

[Close]

BLAST of CsaV3_3G002920 vs. TAIR10
Match: AT4G12545.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 55.8 bits (133), Expect = 2.0e-08
Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = 0


Query: 9   SLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCC 68
           SLALF  LNL+ F+           S+ T  C   +S CA+V+  + ++ G+  PV+PCC
Sbjct: 6   SLALFVSLNLLFFTC---------TSATTGTCPIQISTCANVLNLVDLTLGN-PPVKPCC 65

Query: 69  DLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVNTCN 115
            LIQGL    A  CL  AL  ++ +  +++N  +   L +L+N C+
Sbjct: 66  SLIQGLADLEAAACLCTALKASI-LGIVNINLPIN--LSVLLNVCS 98

[Close]

BLAST of CsaV3_3G002920 vs. TAIR10
Match: AT4G12490.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 1.3e-07
Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 29  PIVPESSP--TTNC---SGNVSACASVI-GFITVSAGSQEPVRPCCDLIQGLVATNAKIC 88
           P++P  +P  + NC   +  +  CA+V+ G + V  G   P +PCC LIQGLV  +A +C
Sbjct: 86  PVIPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSP-QPCCSLIQGLVDLDAAVC 145

Query: 89  LNLALDLAVDINPISVNTSVEAMLDILVNTCN 115
           L  AL      N + +N +V   L +L+N CN
Sbjct: 146 LCTAL----RANVLGINLNVPISLSVLLNVCN 172

[Close]

BLAST of CsaV3_3G002920 vs. TAIR10
Match: AT4G12550.1 (Auxin-Induced in Root cultures 1)

HSP 1 Score: 50.4 bits (119), Expect = 8.4e-07
Identity = 32/105 (30.48%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 10  LALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCD 69
           LALF  LNL+ F+  +      P++S        +  C +V+  + ++ G+  PV+PCC 
Sbjct: 7   LALFVSLNLLFFTYTSATTGTCPKNSI------EIGTCVTVLNLVDLTLGN-PPVKPCCS 66

Query: 70  LIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVNTCN 115
           LIQGL    A +CL  A+  ++ +  +++N  +   L +L+N C+
Sbjct: 67  LIQGLADLEAAVCLCTAVKASI-LGIVNINLPIN--LSVLLNVCS 101

[Close]

BLAST of CsaV3_3G002920 vs. TAIR10
Match: AT4G12500.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 48.9 bits (115), Expect = 2.4e-06
Identity = 34/86 (39.53%), Postives = 45/86 (52.33%), Query Frame = 0


Query: 37  TTNCSGN-------VSACASVI-GFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALD 96
           T   SGN       +  CA+V+ G + V  G Q   +PCC LIQGLV  +A ICL  AL 
Sbjct: 87  TPGSSGNCPIDALRLGVCANVLSGLLNVQLG-QPSAQPCCSLIQGLVDLDAAICLCTAL- 146

Query: 97  LAVDINPISVNTSVEAMLDILVNTCN 115
                N + +N +V   L +L+N CN
Sbjct: 147 ---RANVLGINLNVPISLSVLLNVCN 167

[Close]

BLAST of CsaV3_3G002920 vs. TAIR10
Match: AT4G12480.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 47.4 bits (111), Expect = 7.1e-06
Identity = 27/71 (38.03%), Postives = 38/71 (53.52%), Query Frame = 0


Query: 44  VSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVE 103
           +  CA+V+  +      Q   +PCC LIQGLV  +A ICL  AL      N + +N +V 
Sbjct: 92  LGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTAL----RANVLGINLNVP 151

Query: 104 AMLDILVNTCN 115
             L +L+N CN
Sbjct: 152 ISLSVLLNVCN 158

[Close]

BLAST of CsaV3_3G002920 vs. Swiss-Prot
Match: sp|Q9ZSP6|AIR1L_ARATH (Putative lipid-binding protein AIR1B OS=Arabidopsis thaliana OX=3702 GN=AIR1B PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 3.6e-07
Identity = 37/106 (34.91%), Postives = 58/106 (54.72%), Query Frame = 0


Query: 9   SLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCC 68
           SLALF  LNL+ F+           S+ T  C   +S CA+V+  + ++ G+  PV+PCC
Sbjct: 6   SLALFVSLNLLFFTC---------TSATTGTCPIQISTCANVLNLVDLTLGN-PPVKPCC 65

Query: 69  DLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVNTCN 115
            LIQGL    A  CL  AL  ++ +  +++N  +   L +L+N C+
Sbjct: 66  SLIQGLADLEAAACLCTALKASI-LGIVNINLPIN--LSVLLNVCS 98

[Close]

BLAST of CsaV3_3G002920 vs. Swiss-Prot
Match: sp|Q9SU34|ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.3e-06
Identity = 34/92 (36.96%), Postives = 51/92 (55.43%), Query Frame = 0


Query: 29  PIVPESSP--TTNC---SGNVSACASVI-GFITVSAGSQEPVRPCCDLIQGLVATNAKIC 88
           P++P  +P  + NC   +  +  CA+V+ G + V  G   P +PCC LIQGLV  +A +C
Sbjct: 86  PVIPPRTPGSSGNCPIDALRLGVCANVLSGLLNVQLGQPSP-QPCCSLIQGLVDLDAAVC 145

Query: 89  LNLALDLAVDINPISVNTSVEAMLDILVNTCN 115
           L  AL      N + +N +V   L +L+N CN
Sbjct: 146 LCTAL----RANVLGINLNVPISLSVLLNVCN 172

[Close]

BLAST of CsaV3_3G002920 vs. Swiss-Prot
Match: sp|Q9S7I2|AIR1_ARATH (Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.5e-05
Identity = 32/105 (30.48%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 10  LALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQEPVRPCCD 69
           LALF  LNL+ F+  +      P++S        +  C +V+  + ++ G+  PV+PCC 
Sbjct: 7   LALFVSLNLLFFTYTSATTGTCPKNSI------EIGTCVTVLNLVDLTLGN-PPVKPCCS 66

Query: 70  LIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVNTCN 115
           LIQGL    A +CL  A+  ++ +  +++N  +   L +L+N C+
Sbjct: 67  LIQGLADLEAAVCLCTAVKASI-LGIVNINLPIN--LSVLLNVCS 101

[Close]

BLAST of CsaV3_3G002920 vs. Swiss-Prot
Match: sp|Q9SU33|ERLL3_ARATH (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 4.4e-05
Identity = 34/86 (39.53%), Postives = 45/86 (52.33%), Query Frame = 0


Query: 37  TTNCSGN-------VSACASVI-GFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALD 96
           T   SGN       +  CA+V+ G + V  G Q   +PCC LIQGLV  +A ICL  AL 
Sbjct: 87  TPGSSGNCPIDALRLGVCANVLSGLLNVQLG-QPSAQPCCSLIQGLVDLDAAICLCTAL- 146

Query: 97  LAVDINPISVNTSVEAMLDILVNTCN 115
                N + +N +V   L +L+N CN
Sbjct: 147 ---RANVLGINLNVPISLSVLLNVCN 167

[Close]

BLAST of CsaV3_3G002920 vs. Swiss-Prot
Match: sp|Q39176|ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.3e-04
Identity = 27/71 (38.03%), Postives = 38/71 (53.52%), Query Frame = 0


Query: 44  VSACASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVE 103
           +  CA+V+  +      Q   +PCC LIQGLV  +A ICL  AL      N + +N +V 
Sbjct: 92  LGVCANVLSSLLNIQLGQPSAQPCCSLIQGLVDLDAAICLCTAL----RANVLGINLNVP 151

Query: 104 AMLDILVNTCN 115
             L +L+N CN
Sbjct: 152 ISLSVLLNVCN 158

[Close]

BLAST of CsaV3_3G002920 vs. TrEMBL
Match: tr|A0A0A0L4B3|A0A0A0L4B3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G026690 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.8e-54
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGS 60
           MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGS
Sbjct: 1   MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGS 60

Query: 61  QEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVNTCNN 116
           QEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVNTCNN
Sbjct: 61  QEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVNTCNN 115

[Close]

BLAST of CsaV3_3G002920 vs. TrEMBL
Match: tr|A0A0A0L1L8|A0A0A0L1L8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G027190 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.9e-22
Identity = 68/118 (57.63%), Postives = 85/118 (72.03%), Query Frame = 0


Query: 1   MSSSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGS 60
           MSSS+KSFSLALFFCLNLILFSSLAIAQPIVP SSPT NCS NV  CASV+  + ++ G 
Sbjct: 1   MSSSNKSFSLALFFCLNLILFSSLAIAQPIVPASSPTPNCSRNVRVCASVLNIVNLTIG- 60

Query: 61  QEPVRPCCDLIQGLVATNAKICLNLAL--DLAVDINPI-SVNTSVEA-MLDILVNTCN 115
            + + PCC LIQGL A    IC+  A+  +L   ++ +  VN SVE+ +L IL++ CN
Sbjct: 61  -QNLGPCCQLIQGLAAAEVDICIQTAISNELRASLSGLPPVNLSVESFVLRILLSRCN 116

[Close]

BLAST of CsaV3_3G002920 vs. TrEMBL
Match: tr|A0A2P5Y779|A0A2P5Y779_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA09228 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.3e-06
Identity = 41/112 (36.61%), Postives = 61/112 (54.46%), Query Frame = 0


Query: 3   SSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSGNVSACASVIGFITVSAGSQE 62
           +S ++ SLALFF LN +LF SL  A    P+ +        +  CA V+G + V+ GS  
Sbjct: 2   ASKRTASLALFFALN-VLFFSLVSACGKCPQDTL------KLGVCAEVLGLVNVTVGS-P 61

Query: 63  PVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVNTCN 115
           P +PCC L+QGL    A +CL  AL      N + +N ++   L +L+N C+
Sbjct: 62  PGQPCCSLLQGLADLEAAVCLCTAL----KANVLGINLNIPVSLSLLLNVCS 101

[Close]

BLAST of CsaV3_3G002920 vs. TrEMBL
Match: tr|A0A2G9GJC1|A0A2G9GJC1_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22072 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.5e-05
Identity = 42/123 (34.15%), Postives = 63/123 (51.22%), Query Frame = 0


Query: 3   SSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSG-----------NVSACASVI 62
           +S+K+ SLALF  LNL+ F ++  A    P S+PT +               +  CA ++
Sbjct: 2   ASNKNTSLALFLVLNLVFF-TICNACGSCPGSTPTPSGPSPSNGYCPRDALKLGVCADLL 61

Query: 63  GFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLDILVN 115
           G I V+ G+  P  PCC LIQGL    A +C    L  A+  N + +N +V   L +L+N
Sbjct: 62  GLINVTIGT-PPKTPCCTLIQGLADLEAAVC----LCTAIKANILGINLNVPVSLSLLLN 118

[Close]

BLAST of CsaV3_3G002920 vs. TrEMBL
Match: tr|A0A0D2QW64|A0A0D2QW64_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G199900 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.5e-05
Identity = 44/127 (34.65%), Postives = 61/127 (48.03%), Query Frame = 0


Query: 3   SSDKSFSLALFFCLNLILFSSLAIAQPIVPESSPTTNCSG---------------NVSAC 62
           +S +S SLALFF LN ILF SL  A    P                          +  C
Sbjct: 2   ASKRSASLALFFALN-ILFFSLVSACDSCPXXXXXXXXXXXXXXXXXXXCPRDALKLGVC 61

Query: 63  ASVIGFITVSAGSQEPVRPCCDLIQGLVATNAKICLNLALDLAVDINPISVNTSVEAMLD 115
           A+V+G + V+ GS  PV+PCC L+QGL    A +C    L  A+  N + +N +V   L 
Sbjct: 62  ANVLGLVNVTIGS-PPVQPCCSLLQGLADLEAAVC----LCTAIKANVLGINLNVPVSLS 121

The following BLAST results are available for this feature:

BLAST of CsaV3_3G002920 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55884.1	5.8e-54	100.00	hypothetical protein Csa_3G026690 [Cucumis sativus]	[more]
XP_011652719.1	4.5e-22	57.63	PREDICTED: putative lipid-binding protein AIR1B [Cucumis sativus] >KGN55885.1 hy...	[more]
XP_022759927.1	8.1e-08	40.18	14 kDa proline-rich protein DC2.15-like isoform X2 [Durio zibethinus]	[more]
PPS11411.1	3.4e-06	36.61	hypothetical protein GOBAR_AA09228 [Gossypium barbadense]	[more]
XP_012475941.1	3.8e-05	34.65	PREDICTED: 14 kDa proline-rich protein DC2.15-like [Gossypium raimondii] >KJB213...	[more]

BLAST of CsaV3_3G002920 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G12545.1	2.0e-08	34.91	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12490.1	1.3e-07	36.96	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12550.1	8.4e-07	30.48	Auxin-Induced in Root cultures 1	[more]
AT4G12500.1	2.4e-06	39.53	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G12480.1	7.1e-06	38.03	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

BLAST of CsaV3_3G002920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZSP6\|AIR1L_ARATH	3.6e-07	34.91	Putative lipid-binding protein AIR1B OS=Arabidopsis thaliana OX=3702 GN=AIR1B PE...	[more]
sp\|Q9SU34\|ERLL2_ARATH	2.3e-06	36.96	pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g124...	[more]
sp\|Q9S7I2\|AIR1_ARATH	1.5e-05	30.48	Putative lipid-binding protein AIR1 OS=Arabidopsis thaliana OX=3702 GN=AIR1 PE=2...	[more]
sp\|Q9SU33\|ERLL3_ARATH	4.4e-05	39.53	pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g125...	[more]
sp\|Q39176\|ERLI1_ARATH	1.3e-04	38.03	Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana OX=3702 GN=EARLI1 PE=1 SV...	[more]

BLAST of CsaV3_3G002920 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L4B3\|A0A0A0L4B3_CUCSA	3.8e-54	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G026690 PE=4 SV=1	[more]
tr\|A0A0A0L1L8\|A0A0A0L1L8_CUCSA	2.9e-22	57.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G027190 PE=4 SV=1	[more]
tr\|A0A2P5Y779\|A0A2P5Y779_GOSBA	2.3e-06	36.61	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA09228 PE=4 SV...	[more]
tr\|A0A2G9GJC1\|A0A2G9GJC1_9LAMI	2.5e-05	34.15	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22072 P...	[more]
tr\|A0A0D2QW64\|A0A0D2QW64_GOSRA	2.5e-05	34.65	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G199900 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR027923	Hydrophob_seed

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0010102	lateral root morphogenesis
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G002920.1	CsaV3_3G002920.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 34..115 e-value: 2.5E-8 score: 35.5
None	No IPR available	PANTHER	PTHR31731:SF7	SUBFAMILY NOT NAMED	coord: 8..114
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 8..114
IPR027923	Hydrophobic seed protein	PFAM	PF14547	Hydrophob_seed	coord: 43..114 e-value: 9.0E-10 score: 38.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 43..114

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G002920	CSPI03G02870	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G002920	Cucsa.320740	Cucumber (Gy14) v1	cgycucB499
CsaV3_3G002920	CsGy3G002810	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G002920	Cla005660	Watermelon (97103) v1	cucwmB205
CsaV3_3G002920	MELO3C013956	Melon (DHL92) v3.5.1	cucmeB246
CsaV3_3G002920	MELO3C013956.2	Melon (DHL92) v3.6.1	cucmedB231
CsaV3_3G002920	Cla97C10G187400	Watermelon (97103) v2	cucwmbB182
CsaV3_3G002920	Bhi11G000181	Wax gourd	cucwgoB232

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G002920	Silver-seed gourd	carcucB0567
CsaV3_3G002920	Cucumber (Gy14) v1	cgycucB465
CsaV3_3G002920	Cucurbita maxima (Rimu)	cmacucB0975
CsaV3_3G002920	Cucurbita moschata (Rifu)	cmocucB0961
CsaV3_3G002920	Cucurbita pepo (Zucchini)	cpecucB0256
CsaV3_3G002920	Cucurbita pepo (Zucchini)	cpecucB1047
CsaV3_3G002920	Bottle gourd (USVL1VR-Ls)	cuclsiB172
CsaV3_3G002920	Bottle gourd (USVL1VR-Ls)	cuclsiB250
CsaV3_3G002920	Watermelon (Charleston Gray)	cucwcgB194
CsaV3_3G002920	Watermelon (Charleston Gray)	cucwcgB211
CsaV3_3G002920	Watermelon (97103) v1	cucwmB273
CsaV3_3G002920	Watermelon (97103) v2	cucwmbB178
CsaV3_3G002920	Wax gourd	cucwgoB260
CsaV3_3G002920	Cucumber (Chinese Long) v3	cuccucB124