CsaV3_3G002070 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTTGTTGGCATGATTTTGTTTGAATACGAATAGGAATATATGCACAAATTACAGAACAGATCCTCAAAGAAAAAAACAAGTCGCATTTGTGAGTTAGTCGCTGGTGGGTTCTCGTCCTCAAGCTCCATACGCCTTTATAAACCTACCATTTGCCTTGTTCTTCCAGTACCCATCTCCATTTTTCCCGGTTCTCAATACCCATTTCATAAATTTCCCACATTTGAACACAAGCTTTCATCAATATCTGCTCACGATGACGGCTTCAAAAAATGAAATTTCAGTCGACAGGTAAATTCCCACCATGCAGATGCCATTTATTTGTTGATTGAGTGATTTGTTGTTTTCTATCTGAAACTTGTGTGTGATGTGTGATCGAAAATTATGAATGAATTTCCCTGATGCATTGGGATGGGGGCTTTTGTTGAGATTTGGGATTTAAAATTTGTGATTGCTTATTGATTTGTGCATCTGGATCTATTATTTCGAGGCTTTTGAAATTTGCCTCTGTAGTCTTGTGATTCTTCATTATCCTGCTCATGGTTGCTGCTTTGCTATACATTCATTTGAACCTTGAATTTTCACTTTCAATTGAAAATGGGGTTCTTCATTCTGGGTTTGTGAAATCGAACCTTCCACTATGATGTTCTTGCACGTAAGTTTGTATTCAAATTGGGGAACCTAGAGATTGATTAAGATCATATACTTTTTAGGATGAAAAGAAGAGAACTCATTAATCTTGACTCATGAAGAAGATGCTAGTTTATTTTAGATCATGGTAGGGCCAAAATTTGACGGCCCACACCAGAAATTGCTTGTTGGGAGTATTATCCCTTTACCTGAAAACCCATTTGTCCCAGTTTTTTTCACCCTTTCAACCAGTTTAGCCTTCCCATATATGAATGCTAGCTCTTTGCTCATGTTTATTTTGAGATTCATTGTTTAGGCTAAATTACCATTTTAGCTCGTGCTTCGTTTCAATTTGGTTATAATAGTTTTATAAGTTTCAATTTGGTTTATATAGTTTGGTTAAACCTCTCAATACTTCATTACGTTATGAGTCTTCCTTTACACGCAAACCCACATGTCCCTCCTTTTCTCATATCATCAACCAACTTTCAGATATATCTCATACAATTAGCTGCGTGGAATGACTTTTTAAGTGATAAAAAACATTTTTTCACTTAAAAACACTTATTCAAGCACTTAGAGAGTGATTCAAAACCAATGTTAGATGTGAACTCATTGCCACTTTTTGCCACATCGAAAGAAAACATACTTGGTAAAATAGTATGTTTGAAACTTGATGATGGAACAACAGGTTGAGAGATTAAACCAAACCACTTTGGCTGTGTTGACGATTTTAAAACCATAGGGAACAAATTGAAACCAAACACAAACCAAAGGACTAAAATGGTAATTTTAACCTAATCAATGTCTTTTATCGAAAATTAGAGACGAAGAAAGAACACAATGTTTATGTGAAAACCCTAGTACAGGGAGAAAAACCATGGTATAAATGTTCATTATTATTTCTTTTGATAATAAAGGTACAAAGGGGAAATATTTGTAGGCAACACGAGCCTAATTAAAATAATAAAAAATTAGGGCAGAGTAAATCTAAACTACCCTTGGGCTTTCAACATGATCCAAACCCACTATTTCTAATGGTCTTAAAATAAATAATAAGGAGCACGAGAACCGAATTATTGTTTGTCATGACTCTTCTTGATCACAAGACCAACAAAGTCAACAGAAGTTCTTTTAGATTTCCTTGAGCTATTACTACTTTAAAAGATTTGGTTTGCCTGTGGTATTCTGTTTTCCTTATTCCTTGTATTCTGTCGAGCCAGCAAAAGCTCTCTTGCTGCACTTGCACCTGTTGAAGCAGTTCTATTCGACGTAGATGGAACATTATGTGATTCAGATCCGCTTCATTACTATGCCTTCCGTGAAATGCTTCAGGAGGTTTGTTCTATTTTGTATGCTTTGAATAGAAAAGAAAATAGAGAGAAGTCTTCTTCTTTATTTATTGACTTGAGTTTACAAAAACGAAAAACATGAAAAAGCAGATTACAACAAAGGGCTCCAACTGTTTGGTATAGCAGAATTTTAGAAGTGTTATAGGTGAGGCAGTAACACATGCTGCTATGATTTGCAGATTGGTTTCAATGGTGGGGTTCCAATTGATGAGGAGTTTTTCATTAAAAATGTTGCCGGCAAGCATAATGATGATATTGCCCGAGCATTGTTCCCTGATGATTTCGAAAGAGGTTTGAAATTTTGCGATGAGAAAGAGGCTATGTTTAGGAGGTAAGTCTTTCTCTTCATACCTTAGAATGTCTTTATAGGTATGTTTGATGACGATATAACTGAAAAACTTAATGCAACAGATTGGTCACCGAACAATTAAAGCCAGTGGATGGCTTGTATAAAGTGAAGAAATGGATAGAAGACCGCGGATTGAAACGTGCAGCAGTTACAAATGCCCCTCGGCCGAATGCTGAGCTTATGATCTCAATGCTTGGTCTTAAGGATTTTTTTGAGGCTATCATTATAGGAGGTGAATGTAAACATGCCAAACCACATCCAGAACCATATCTAAAGGCTCTGGAAGTACTCAAAGTGTCAAAGGAACACACTTTCATTTTTGAGGTTTGCCATCTTTTGGAAGTACAATTTTCTTTTCCCCAAAAGTTGACTAGCTTGTTTAGAATCTAACTTCTTTACTCCTTTGCTTTGCCAGGATTCTGCATCAGGGATCAAAGCTGGAGTGGCAGCCGAGATGCCTGTCGTCGGTATAGCAACAAGAAATCCCGAGCAATTGTTGATGCAAGCAAAGCCTACCCTTGTCGTAAAGGACTACGATGATCTGAAATTGTGGGCAGCTTTGGACGAACTCGATAAGAGAGGAGGTACCGTTAAGAATGCATGATCATCAATGCATCATATTGATGAATTAGTCTATCAATTCATTGCTACTCGCTATCTAATAATTTGAATAACTTAGCTGTAGAAGCAAACCTGTCATTCTTCAGCTTTGGCTCTTAACACCAATCGTAATACAATCAAAATAAGATGGTTAATAGATTAGGAAAAGTCCTAATACAATCAAAACAAGATGGTTAATAGATTAGGAAAAGTCATTGGAAGGCCTATCAGACATATACAAGATTACCATTATCAATTTTATTTTCTTCCAGTGATGTATTACTTGTTTTGCTTTCCTTGTATTTTTATTTTTTAGAAAAGCTCACAACAATATAGGCTTTTGAGCTCTCATAGTTTTGACTTTGAATTTTCTTCGAGCAGTAGCTAGGAGCATTTGTGGCAATAATTATTCAAGACTGTAATAACCATATCTTGTTACAGTAAATATTACTTTGCTACCGTTTTTACTATTTTACATTATTATTTTTTATTATTTGCTTCAGAGTTTACTATTTCTTTCTCAAACTAAAATATTAACTAAAATATTATATACAACCTAA ATGACGGCTTCAAAAAATGAAATTTCAGTCGACAGCAAAAGCTCTCTTGCTGCACTTGCACCTGTTGAAGCAGTTCTATTCGACGTAGATGGAACATTATGTGATTCAGATCCGCTTCATTACTATGCCTTCCGTGAAATGCTTCAGGAGATTGGTTTCAATGGTGGGGTTCCAATTGATGAGGAGTTTTTCATTAAAAATGTTGCCGGCAAGCATAATGATGATATTGCCCGAGCATTGTTCCCTGATGATTTCGAAAGAGGTTTGAAATTTTGCGATGAGAAAGAGGCTATGTTTAGGAGATTGGTCACCGAACAATTAAAGCCAGTGGATGGCTTGTATAAAGTGAAGAAATGGATAGAAGACCGCGGATTGAAACGTGCAGCAGTTACAAATGCCCCTCGGCCGAATGCTGAGCTTATGATCTCAATGCTTGGTCTTAAGGATTTTTTTGAGGCTATCATTATAGGAGGTGAATGTAAACATGCCAAACCACATCCAGAACCATATCTAAAGGCTCTGGAAGTACTCAAAGTGTCAAAGGAACACACTTTCATTTTTGAGGATTCTGCATCAGGGATCAAAGCTGGAGTGGCAGCCGAGATGCCTGTCGTCGGTATAGCAACAAGAAATCCCGAGCAATTGTTGATGCAAGCAAAGCCTACCCTTGTCGTAAAGGACTACGATGATCTGAAATTGTGGGCAGCTTTGGACGAACTCGATAAGAGAGGAGGTACCGTTAAGAATGCATGA ATGACGGCTTCAAAAAATGAAATTTCAGTCGACAGCAAAAGCTCTCTTGCTGCACTTGCACCTGTTGAAGCAGTTCTATTCGACGTAGATGGAACATTATGTGATTCAGATCCGCTTCATTACTATGCCTTCCGTGAAATGCTTCAGGAGATTGGTTTCAATGGTGGGGTTCCAATTGATGAGGAGTTTTTCATTAAAAATGTTGCCGGCAAGCATAATGATGATATTGCCCGAGCATTGTTCCCTGATGATTTCGAAAGAGGTTTGAAATTTTGCGATGAGAAAGAGGCTATGTTTAGGAGATTGGTCACCGAACAATTAAAGCCAGTGGATGGCTTGTATAAAGTGAAGAAATGGATAGAAGACCGCGGATTGAAACGTGCAGCAGTTACAAATGCCCCTCGGCCGAATGCTGAGCTTATGATCTCAATGCTTGGTCTTAAGGATTTTTTTGAGGCTATCATTATAGGAGGTGAATGTAAACATGCCAAACCACATCCAGAACCATATCTAAAGGCTCTGGAAGTACTCAAAGTGTCAAAGGAACACACTTTCATTTTTGAGGATTCTGCATCAGGGATCAAAGCTGGAGTGGCAGCCGAGATGCCTGTCGTCGGTATAGCAACAAGAAATCCCGAGCAATTGTTGATGCAAGCAAAGCCTACCCTTGTCGTAAAGGACTACGATGATCTGAAATTGTGGGCAGCTTTGGACGAACTCGATAAGAGAGGAGGTACCGTTAAGAATGCATGA MTASKNEISVDSKSSLAALAPVEAVLFDVDGTLCDSDPLHYYAFREMLQEIGFNGGVPIDEEFFIKNVAGKHNDDIARALFPDDFERGLKFCDEKEAMFRRLVTEQLKPVDGLYKVKKWIEDRGLKRAAVTNAPRPNAELMISMLGLKDFFEAIIIGGECKHAKPHPEPYLKALEVLKVSKEHTFIFEDSASGIKAGVAAEMPVVGIATRNPEQLLMQAKPTLVVKDYDDLKLWAALDELDKRGGTVKNA
BLAST of CsaV3_3G002070 vs. NCBI nr
Match: XP_004150169.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Cucumis sativus] >KGN55799.1 2-deoxyglucose-6-phosphate phosphatase [Cucumis sativus]) HSP 1 Score: 506.9 bits (1304), Expect = 3.9e-140 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. NCBI nr
Match: XP_008448747.1 (PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Cucumis melo]) HSP 1 Score: 493.8 bits (1270), Expect = 3.4e-136 Identity = 243/250 (97.20%), Postives = 247/250 (98.80%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. NCBI nr
Match: XP_023553137.1 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 475.7 bits (1223), Expect = 9.6e-131 Identity = 230/250 (92.00%), Postives = 242/250 (96.80%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. NCBI nr
Match: XP_022965155.1 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X1 [Cucurbita maxima]) HSP 1 Score: 471.9 bits (1213), Expect = 1.4e-129 Identity = 228/250 (91.20%), Postives = 241/250 (96.40%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. NCBI nr
Match: XP_022923420.1 (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp isoform X1 [Cucurbita moschata]) HSP 1 Score: 471.1 bits (1211), Expect = 2.4e-129 Identity = 229/250 (91.60%), Postives = 240/250 (96.00%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. TAIR10
Match: AT2G38740.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 359.8 bits (922), Expect = 1.4e-99 Identity = 165/233 (70.82%), Postives = 199/233 (85.41%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. TAIR10
Match: AT1G56500.1 (haloacid dehalogenase-like hydrolase family protein) HSP 1 Score: 85.5 bits (210), Expect = 5.1e-17 Identity = 66/245 (26.94%), Postives = 113/245 (46.12%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. TAIR10
Match: AT4G21470.1 (riboflavin kinase/FMN hydrolase) HSP 1 Score: 67.8 bits (164), Expect = 1.1e-11 Identity = 59/215 (27.44%), Postives = 101/215 (46.98%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. TAIR10
Match: AT4G39970.1 (Haloacid dehalogenase-like hydrolase (HAD) superfamily protein) HSP 1 Score: 56.6 bits (135), Expect = 2.5e-08 Identity = 54/225 (24.00%), Postives = 95/225 (42.22%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. Swiss-Prot
Match: sp|Q9ZVJ5|SGGP_ARATH (Haloacid dehalogenase-like hydrolase domain-containing protein Sgpp OS=Arabidopsis thaliana OX=3702 GN=SGPP PE=1 SV=2) HSP 1 Score: 359.8 bits (922), Expect = 2.5e-98 Identity = 165/233 (70.82%), Postives = 199/233 (85.41%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. Swiss-Prot
Match: sp|Q9X0Y1|P1254_THEMA (Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) OX=243274 GN=TM_1254 PE=1 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 4.0e-19 Identity = 61/218 (27.98%), Postives = 114/218 (52.29%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. Swiss-Prot
Match: sp|Q8VZ10|SOQ1_ARATH (Protein SUPPRESSOR OF QUENCHING 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SOQ1 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 9.2e-16 Identity = 66/245 (26.94%), Postives = 113/245 (46.12%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. Swiss-Prot
Match: sp|P44004|Y488_HAEIN (Uncharacterized protein HI_0488 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_0488 PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 6.0e-15 Identity = 50/190 (26.32%), Postives = 94/190 (49.47%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. Swiss-Prot
Match: sp|Q9K6Y7|PPAX_BACHD (Pyrophosphatase PpaX OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=ppaX PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 3.9e-14 Identity = 59/217 (27.19%), Postives = 99/217 (45.62%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. TrEMBL
Match: tr|A0A0A0L429|A0A0A0L429_CUCSA (2-deoxyglucose-6-phosphate phosphatase OS=Cucumis sativus OX=3659 GN=Csa_3G016930 PE=4 SV=1) HSP 1 Score: 506.9 bits (1304), Expect = 2.6e-140 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. TrEMBL
Match: tr|A0A1S3BL19|A0A1S3BL19_CUCME (haloacid dehalogenase-like hydrolase domain-containing protein Sgpp OS=Cucumis melo OX=3656 GN=LOC103490819 PE=4 SV=1) HSP 1 Score: 493.8 bits (1270), Expect = 2.3e-136 Identity = 243/250 (97.20%), Postives = 247/250 (98.80%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. TrEMBL
Match: tr|W9S5E8|W9S5E8_9ROSA (Phosphorylated carbohydrates phosphatase OS=Morus notabilis OX=981085 GN=L484_023341 PE=4 SV=1) HSP 1 Score: 422.5 bits (1085), Expect = 6.4e-115 Identity = 200/249 (80.32%), Postives = 223/249 (89.56%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. TrEMBL
Match: tr|A0A2P5BEA8|A0A2P5BEA8_PARAD (HAD hydrolase, subfamily IA OS=Parasponia andersonii OX=3476 GN=PanWU01x14_246360 PE=4 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 6.0e-113 Identity = 198/249 (79.52%), Postives = 219/249 (87.95%), Query Frame = 0
BLAST of CsaV3_3G002070 vs. TrEMBL
Match: tr|M5WAC2|M5WAC2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G047600 PE=4 SV=1) HSP 1 Score: 414.5 bits (1064), Expect = 1.7e-112 Identity = 190/246 (77.24%), Postives = 223/246 (90.65%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |