CsaV3_3G001880 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G001880
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	TLDc domain containing protein
Location	chr3 : 1402864 .. 1405084 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGTGGGTGGGGTCGATGCAAAACGAAAGGCAAATTGATTGGATTGAATTGGCGCCGAGAGAAAAAAATGGGTCAGAAAAATTTTAGAGATAAGGTGATGTTTTTTTCTTCAAAATCCCACTTTGGAATTGAAATGAATGTGAATCAATGGCTTCTTGCATCTTCAACAGTGTATTTTACAGGTTGAAGACGACCCCCAGCTGTTCATTTGGCAAATGGAATTGGAACTTTGGCAATGGCAACAAGAAACAAGACAAACCCCAAATCAAATACCATGATATTGTTCTTCCATTCCCTCTTTCTCTCCTTGAAAAAACATTCTTGAAACGTATTGTTCTTCCATTCCCTGAGTTTGATTGTTCTTGAATGTTAGTCTATGGCTTCCTGTTGTGTAATCTGTTGTCTCTACTGGGAAAGTTTTCATCAAAATTAGGTTCCATTTTTGTTATATAATGCTTTAGATTCTCTAGTTTTATGAAGATATGTAAGGCATGTTTGGGAGTGATTTTGAAAATGTTGGAACTCACTTTTTCGGATTCAAAATCAATTTTGAGTGAATAAAGATGTGTTTTTACAGCGATTTGTACTATTTCAAAATCACTCTCCTTAACATGCCCTTAGTCACTTTGTTGGTTTACTGACGCACATATTTCTTGAAAGGTGTTTTTGTCTCCATTGTTGGAACTTTTGTTTGAATGTTCTGTGCTTTGTCTTTGTTATTTTCTTTTACTTTTTTTTTTTTTTTTTTTTTGAAGTTGCATTTTCTTACTTTGTTAATTAGTTTTCTTGTACAGGTTTAGTAGAAAAACAATTTTAACATATTGGCAGTTATTATAATGCCATTGTTGATCAAACCCATCGAGTTTTTTAGTTTCTGAGACTGAGAAATCAAGGCTATAATCTTTTCTTGAGCCCTGATCATGTTTTGTTAAGGGACCATTTTTTTCCTTCTCAAAACTACTTTTTTGGAACTTTAATTAGGAAGTGACTTTATATTTTGAAGCATAGGGTAACTTGTGGGAAACCGTAACAGAATCAATCTTTGTTGTTACGTACAGAATAAATGAAGTGTTTCGAGGTACCTGGATCCACCCTTCTTGAGATATCTCTCAAGTCCTAATTCATTCACCAAAATAATATCTACCTACTCCTTACCACTCCCACTATTTATAACCTAATACCATAGTAATCTCCCTAACTAATAATTAACAATATACCCTTACAATAATCTAATAAAATTTTGGGGAAAAGCACAATGAGATGATGGTTTTTTTACTTTTCCCCTTCATCCCTACTCATCGGAACATTGCACTAGTTTTAGAGTTCTCTTTAGTTGGATTTCAGGGTGCATGTTGTTGGAATTGTTTAGTTCATATGATGTTGTATTAATCTTGATTGTAGTGTTGTAAGAAACAATCATCAAAATATGGATCACATCAATATAGACTCATTTGTATTTGTACTATCAAAAATATTTTCCAGGTAAAGAACTCAAATGCTGCTATAAGGCCACATCAGATGGATTCAGCGCTACCGATTTCCACGCGTGTTGCGACTTCAAGGGACCATGTGTCATAATTGGCTACACAGACAAATCCTTCAAGTTTGGTGCATTCAATCCTGAGGGCTACAGAAGCACAGATGACTACTACGACACTTTTGATGCATTCCTCTTCTATTGGAAAGACAATGAGGATGATGATCCCATCATCTTGCCCAAGGTTGGGGGTAGTGGTGCAGCGCTATTCGATTACGCGAGGGGCGGGCCACAGTTTGGGGCTGATGGATTGCTCATTGGCCCTCCTTTGGCACCTGTAATGGGTGGCTTTGCTGGGCCAGACACGAACTCGGGCGTCGGGGACCTAAGGCAAGCGAGGTCTCGGCTTGGACTATCTTATGCCAAGAGAAAAGATGGGAAGGACTCCATTTTTGGAGATGAAAATAGAGCTGTTGTTGCTGAAGTGCAGGTCTTTTGTAGCCCTCAAATAGCAAGCTTGTATTGAAAGTGGAATGAGCAAGCAGCCTCTAAAGGTGTTTTGCATTTGATGGTTATGTATATTCCTATTGCCATGGAACTTTGTTCATTGATTCTTTGTTCTTACAGAAATAATAGTGAATCGTTCAAATTATGAGGACAAAGCCCTAGTTCGTAAACATAGTAAGATAATATAATATAACGTACTAGTTTTATTTTATTCTAAAAATTTGCCTGGTTTCTAT

mRNA sequence

ATGGCTTCTTGCATCTTCAACAGTGTATTTTACAGGTTGAAGACGACCCCCAGCTGTTCATTTGGCAAATGGAATTGGAACTTTGGCAATGGCAACAAGAAACAAGACAAACCCCAAATCAAATACCATGATATTGTTCTTCCATTCCCTCTTTCTCTCCTTGAAAAAACATTCTTGAAACGTAAAGAACTCAAATGCTGCTATAAGGCCACATCAGATGGATTCAGCGCTACCGATTTCCACGCGTGTTGCGACTTCAAGGGACCATGTGTCATAATTGGCTACACAGACAAATCCTTCAAGTTTGGTGCATTCAATCCTGAGGGCTACAGAAGCACAGATGACTACTACGACACTTTTGATGCATTCCTCTTCTATTGGAAAGACAATGAGGATGATGATCCCATCATCTTGCCCAAGGTTGGGGGTAGTGGTGCAGCGCTATTCGATTACGCGAGGGGCGGGCCACAGTTTGGGGCTGATGGATTGCTCATTGGCCCTCCTTTGGCACCTGTAATGGGTGGCTTTGCTGGGCCAGACACGAACTCGGGCGTCGGGGACCTAAGGCAAGCGAGGTCTCGGCTTGGACTATCTTATGCCAAGAGAAAAGATGGGAAGGACTCCATTTTTGGAGATGAAAATAGAGCTGTTGTTGCTGAAGTGCAGGTCTTTTGTAGCCCTCAAATAGCAAGCTTGTATTGA

Coding sequence (CDS)

ATGGCTTCTTGCATCTTCAACAGTGTATTTTACAGGTTGAAGACGACCCCCAGCTGTTCATTTGGCAAATGGAATTGGAACTTTGGCAATGGCAACAAGAAACAAGACAAACCCCAAATCAAATACCATGATATTGTTCTTCCATTCCCTCTTTCTCTCCTTGAAAAAACATTCTTGAAACGTAAAGAACTCAAATGCTGCTATAAGGCCACATCAGATGGATTCAGCGCTACCGATTTCCACGCGTGTTGCGACTTCAAGGGACCATGTGTCATAATTGGCTACACAGACAAATCCTTCAAGTTTGGTGCATTCAATCCTGAGGGCTACAGAAGCACAGATGACTACTACGACACTTTTGATGCATTCCTCTTCTATTGGAAAGACAATGAGGATGATGATCCCATCATCTTGCCCAAGGTTGGGGGTAGTGGTGCAGCGCTATTCGATTACGCGAGGGGCGGGCCACAGTTTGGGGCTGATGGATTGCTCATTGGCCCTCCTTTGGCACCTGTAATGGGTGGCTTTGCTGGGCCAGACACGAACTCGGGCGTCGGGGACCTAAGGCAAGCGAGGTCTCGGCTTGGACTATCTTATGCCAAGAGAAAAGATGGGAAGGACTCCATTTTTGGAGATGAAAATAGAGCTGTTGTTGCTGAAGTGCAGGTCTTTTGTAGCCCTCAAATAGCAAGCTTGTATTGA

Protein sequence

MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLKRKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY

Homology

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BLAST of CsaV3_3G001880 vs. NCBI nr
Match: XP_004148731.1 (PREDICTED: uncharacterized protein LOC101203266 [Cucumis sativus] >KGN55780.1 hypothetical protein Csa_3G011810 [Cucumis sativus])

HSP 1 Score: 496.5 bits (1277), Expect = 4.9e-137
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK 60
           MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK
Sbjct: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK 60

Query: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120
           RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF
Sbjct: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120

Query: 121 DAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPD 180
           DAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPD
Sbjct: 121 DAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPD 180

Query: 181 TNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           TNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY
Sbjct: 181 TNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 233

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BLAST of CsaV3_3G001880 vs. NCBI nr
Match: XP_008448709.1 (PREDICTED: uncharacterized protein LOC103490798 [Cucumis melo])

HSP 1 Score: 485.3 bits (1248), Expect = 1.1e-133
Identity = 228/234 (97.44%), Postives = 233/234 (99.57%), Query Frame = 0


Query: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK 60
           MASCIFNSVFYRLKTTPSCSFGKWNWNFG+GNKKQDKPQIKYHDIVLPFP+SLL+KTFLK
Sbjct: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGDGNKKQDKPQIKYHDIVLPFPVSLLDKTFLK 60

Query: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120
           RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF
Sbjct: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120

Query: 121 DAFLFYWKDNEDD-DPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 180
           DAFLFYWKDNED+ DPI+LPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP
Sbjct: 121 DAFLFYWKDNEDNADPIVLPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 180

Query: 181 DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY
Sbjct: 181 DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234

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BLAST of CsaV3_3G001880 vs. NCBI nr
Match: XP_022145275.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111014765 [Momordica charantia])

HSP 1 Score: 439.1 bits (1128), Expect = 9.3e-120
Identity = 209/234 (89.32%), Postives = 220/234 (94.02%), Query Frame = 0


Query: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK 60
           MASCIFNS+FYRLKT P+ SFG WNW+FGNG+KK+DKP IKYH I LPFP SL++KTFLK
Sbjct: 1   MASCIFNSLFYRLKTIPTSSFG-WNWSFGNGSKKEDKPNIKYHQIDLPFPPSLVDKTFLK 60

Query: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120
            +ELKCCYKATSDGFSATDFH CCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF
Sbjct: 61  GRELKCCYKATSDGFSATDFHTCCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120

Query: 121 DAFLFYWK-DNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 180
           DAFLFYW+ DNE  DPIILPKVGGSGAALFDYARGGPQFGADGLLI PPLAPVMGGFAGP
Sbjct: 121 DAFLFYWELDNEAADPIILPKVGGSGAALFDYARGGPQFGADGLLIXPPLAPVMGGFAGP 180

Query: 181 DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           DTNSGVGDLRQA+SRLGLSYAKRKDGK+SIFGDE RAVVAEVQVFCSPQIASLY
Sbjct: 181 DTNSGVGDLRQAKSRLGLSYAKRKDGKESIFGDEGRAVVAEVQVFCSPQIASLY 233

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BLAST of CsaV3_3G001880 vs. NCBI nr
Match: XP_023005957.1 (uncharacterized protein LOC111498814 [Cucurbita maxima])

HSP 1 Score: 436.4 bits (1121), Expect = 6.0e-119
Identity = 207/231 (89.61%), Postives = 214/231 (92.64%), Query Frame = 0


Query: 4   CIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLKRKE 63
           C+      RLKTTPSCSFG WNWNFGN N K +KPQIKYHDI LPFPLSL++ TFLKRKE
Sbjct: 32  CLRKDFGIRLKTTPSCSFG-WNWNFGNANNKDNKPQIKYHDIDLPFPLSLVDNTFLKRKE 91

Query: 64  LKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAF 123
           LKCCYKATSDGFSATDFH CCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAF
Sbjct: 92  LKCCYKATSDGFSATDFHTCCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAF 151

Query: 124 LFYWKDNED-DDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN 183
           LFYW+ NE  DDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN
Sbjct: 152 LFYWEHNETADDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN 211

Query: 184 SGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           SG+GDLRQA+SRLGLSYAKRKDGKDSIFGD NRAVVAEVQVFCSPQIASLY
Sbjct: 212 SGIGDLRQAKSRLGLSYAKRKDGKDSIFGDANRAVVAEVQVFCSPQIASLY 261

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BLAST of CsaV3_3G001880 vs. NCBI nr
Match: XP_023520894.1 (uncharacterized protein LOC111784413 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435.6 bits (1119), Expect = 1.0e-118
Identity = 207/231 (89.61%), Postives = 214/231 (92.64%), Query Frame = 0


Query: 4   CIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLKRKE 63
           C+      RLKTTPSCSFG WNWNFGN N K +KPQIKYHDI LPFPLSL++ TFLKRKE
Sbjct: 33  CLRKDFGIRLKTTPSCSFG-WNWNFGNPNNKDNKPQIKYHDIDLPFPLSLVDNTFLKRKE 92

Query: 64  LKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAF 123
           LKCCYKATSDGFSATDFH CCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAF
Sbjct: 93  LKCCYKATSDGFSATDFHTCCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTFDAF 152

Query: 124 LFYWKDNED-DDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN 183
           LFYW+ NE  DDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN
Sbjct: 153 LFYWEHNETADDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPDTN 212

Query: 184 SGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           SG+GDLRQA+SRLGLSYAKRKDGKDSIFGD NRAVVAEVQVFCSPQIASLY
Sbjct: 213 SGIGDLRQAKSRLGLSYAKRKDGKDSIFGDANRAVVAEVQVFCSPQIASLY 262

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BLAST of CsaV3_3G001880 vs. TAIR10
Match: AT1G32520.1 (unknown protein)

HSP 1 Score: 334.0 bits (855), Expect = 7.7e-92
Identity = 169/240 (70.42%), Postives = 190/240 (79.17%), Query Frame = 0


Query: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFG-NGNKKQDK----PQIKYH-DIVLPFPLSLL 60
           MASC  ++ F+ +          +N  FG N  KK D      Q  YH D+ +PF LS++
Sbjct: 1   MASCAISNSFHTVTFKTLKRISPYNSLFGWNSGKKIDNIRPPQQPAYHDDVEIPFSLSMV 60

Query: 61  EKTFLKRKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYT-DKSFKFGAFNPEGYRST 120
            KTFLK +ELKCCYKA+ DGF AT FH  CDFKGPCVII YT DKSFKFG F+PEGYRST
Sbjct: 61  NKTFLKGRELKCCYKASIDGFGATKFHERCDFKGPCVIIAYTKDKSFKFGGFSPEGYRST 120

Query: 121 DDYYDTFDAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVM 180
           DDYYDTFDAFLFYW + + DDPI+LPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVM
Sbjct: 121 DDYYDTFDAFLFYWLE-DCDDPIVLPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVM 180

Query: 181 GGFAGPDTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           GGFAGPDTNSG+GDLR A+SRLGLSYAKRKDGK+SIFGDEN+  + +V VFCSP IASLY
Sbjct: 181 GGFAGPDTNSGIGDLRVAKSRLGLSYAKRKDGKESIFGDENKVSLDDVLVFCSPYIASLY 239

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BLAST of CsaV3_3G001880 vs. TrEMBL
Match: tr|A0A0A0L1B1|A0A0A0L1B1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011810 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 3.3e-137
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK 60
           MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK
Sbjct: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK 60

Query: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120
           RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF
Sbjct: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120

Query: 121 DAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPD 180
           DAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPD
Sbjct: 121 DAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGPD 180

Query: 181 TNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           TNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY
Sbjct: 181 TNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 233

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BLAST of CsaV3_3G001880 vs. TrEMBL
Match: tr|A0A1S3BKB8|A0A1S3BKB8_CUCME (uncharacterized protein LOC103490798 OS=Cucumis melo OX=3656 GN=LOC103490798 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 7.5e-134
Identity = 228/234 (97.44%), Postives = 233/234 (99.57%), Query Frame = 0


Query: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFLK 60
           MASCIFNSVFYRLKTTPSCSFGKWNWNFG+GNKKQDKPQIKYHDIVLPFP+SLL+KTFLK
Sbjct: 1   MASCIFNSVFYRLKTTPSCSFGKWNWNFGDGNKKQDKPQIKYHDIVLPFPVSLLDKTFLK 60

Query: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120
           RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF
Sbjct: 61  RKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDTF 120

Query: 121 DAFLFYWKDNEDD-DPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 180
           DAFLFYWKDNED+ DPI+LPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP
Sbjct: 121 DAFLFYWKDNEDNADPIVLPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 180

Query: 181 DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY
Sbjct: 181 DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234

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BLAST of CsaV3_3G001880 vs. TrEMBL
Match: tr|A0A151SKA4|A0A151SKA4_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_001473 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 3.6e-104
Identity = 190/234 (81.20%), Postives = 205/234 (87.61%), Query Frame = 0


Query: 1   MASCIFNS-VFYRLKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFL 60
           MASCI NS  F   KT+P C FG   WN G  N+  DKPQIKYHDI L F  SL++KTFL
Sbjct: 1   MASCIPNSPSFQGWKTSPHCLFG---WNIGK-NRVSDKPQIKYHDIDLTFSSSLVDKTFL 60

Query: 61  KRKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDT 120
           K KELKCCY+AT DGFSAT+FH CCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDT
Sbjct: 61  KGKELKCCYRATIDGFSATNFHECCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDT 120

Query: 121 FDAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 180
           FDAFLFYW +NE   PIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP
Sbjct: 121 FDAFLFYWIENE-TKPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 180

Query: 181 DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           DTNSG+GDLRQA+SRLGLSYAKR+DGK+SIFGDE+RA + EV+VFCSP+IASLY
Sbjct: 181 DTNSGIGDLRQAKSRLGLSYAKREDGKESIFGDESRATLQEVEVFCSPKIASLY 229

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BLAST of CsaV3_3G001880 vs. TrEMBL
Match: tr|A0A067KVE5|A0A067KVE5_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10628 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 8.1e-104
Identity = 186/234 (79.49%), Postives = 202/234 (86.32%), Query Frame = 0


Query: 1   MASCIFNSVFYRLK-TTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFL 60
           MA CI N  F+  K ++P   FG   WN G      DKPQ KYH+I LPFP SL++KTFL
Sbjct: 1   MAYCISNPAFHGWKRSSPQNLFG---WNVGK-RSADDKPQPKYHEIDLPFPASLVDKTFL 60

Query: 61  KRKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDT 120
           K +ELKCCYKAT DGFSAT+FH CCDFKGPCVIIGYT+KSFKFGAFNPEGYRSTDDYYDT
Sbjct: 61  KGRELKCCYKATIDGFSATNFHNCCDFKGPCVIIGYTNKSFKFGAFNPEGYRSTDDYYDT 120

Query: 121 FDAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 180
           FDAFLFYW DNE  DPI+LPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP
Sbjct: 121 FDAFLFYWTDNETIDPIVLPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 180

Query: 181 DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           DTNSG+GDLRQA+SRLGLSYAKR DGK+SIFGDE++A + EVQVFCSPQIASLY
Sbjct: 181 DTNSGIGDLRQAKSRLGLSYAKRVDGKESIFGDESKATIGEVQVFCSPQIASLY 230

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BLAST of CsaV3_3G001880 vs. TrEMBL
Match: tr|K7MLU1|K7MLU1_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_17G154200 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.4e-103
Identity = 187/234 (79.91%), Postives = 203/234 (86.75%), Query Frame = 0


Query: 1   MASCIFNSVFYR-LKTTPSCSFGKWNWNFGNGNKKQDKPQIKYHDIVLPFPLSLLEKTFL 60
           MA CI NS   +  KT P C FG   WN G  N+   KPQIKYHDI L FP SL++KTFL
Sbjct: 502 MAYCIPNSPSLQGWKTGPCCLFG---WNIGK-NRVNGKPQIKYHDIDLTFPTSLVDKTFL 561

Query: 61  KRKELKCCYKATSDGFSATDFHACCDFKGPCVIIGYTDKSFKFGAFNPEGYRSTDDYYDT 120
           + KELKCCY+AT DGFSAT+FH CCDFKGPCVIIGYT+KSFKFGAFNPEGYRSTDDYYDT
Sbjct: 562 RGKELKCCYRATIDGFSATNFHECCDFKGPCVIIGYTNKSFKFGAFNPEGYRSTDDYYDT 621

Query: 121 FDAFLFYWKDNEDDDPIILPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 180
           FDAFLFYW DNE   PI+LPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP
Sbjct: 622 FDAFLFYWIDNETTKPIMLPKVGGSGAALFDYARGGPQFGADGLLIGPPLAPVMGGFAGP 681

Query: 181 DTNSGVGDLRQARSRLGLSYAKRKDGKDSIFGDENRAVVAEVQVFCSPQIASLY 234
           DTNSG+GDLRQA+SRLGLSYAKR+DGK+SIFGDE+RA + EV+VFCSPQIASLY
Sbjct: 682 DTNSGIGDLRQAKSRLGLSYAKREDGKESIFGDESRATLEEVEVFCSPQIASLY 731

The following BLAST results are available for this feature:

BLAST of CsaV3_3G001880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148731.1	4.9e-137	100.00	PREDICTED: uncharacterized protein LOC101203266 [Cucumis sativus] >KGN55780.1 hy...	[more]
XP_008448709.1	1.1e-133	97.44	PREDICTED: uncharacterized protein LOC103490798 [Cucumis melo]	[more]
XP_022145275.1	9.3e-120	89.32	LOW QUALITY PROTEIN: uncharacterized protein LOC111014765 [Momordica charantia]	[more]
XP_023005957.1	6.0e-119	89.61	uncharacterized protein LOC111498814 [Cucurbita maxima]	[more]
XP_023520894.1	1.0e-118	89.61	uncharacterized protein LOC111784413 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_3G001880 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32520.1	7.7e-92	70.42	unknown protein	[more]

BLAST of CsaV3_3G001880 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_3G001880 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L1B1\|A0A0A0L1B1_CUCSA	3.3e-137	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011810 PE=4 SV=1	[more]
tr\|A0A1S3BKB8\|A0A1S3BKB8_CUCME	7.5e-134	97.44	uncharacterized protein LOC103490798 OS=Cucumis melo OX=3656 GN=LOC103490798 PE=...	[more]
tr\|A0A151SKA4\|A0A151SKA4_CAJCA	3.6e-104	81.20	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_001473 PE=4 SV=1	[more]
tr\|A0A067KVE5\|A0A067KVE5_JATCU	8.1e-104	79.49	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10628 PE=4 SV=1	[more]
tr\|K7MLU1\|K7MLU1_SOYBN	1.4e-103	79.91	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_17G154200 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006571	TLDc_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0015743	malate transport
biological_process	GO:0071423	malate transmembrane transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009705	plant-type vacuole membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0015140	malate transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G001880.1	CsaV3_3G001880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006571	TLDc domain	PFAM	PF07534	TLD	coord: 67..159 e-value: 1.6E-8 score: 34.8
None	No IPR available	PANTHER	PTHR14241	INTERFERON-INDUCED PROTEIN 44	coord: 61..233
None	No IPR available	PANTHER	PTHR14241:SF11	SUBFAMILY NOT NAMED	coord: 61..233

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G001880	CSPI03G01840	Wild cucumber (PI 183967)	cpicucB144
CsaV3_3G001880	Cucsa.321710	Cucumber (Gy14) v1	cgycucB499
CsaV3_3G001880	CsGy3G001710	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G001880	Carg12082	Silver-seed gourd	carcucB0599
CsaV3_3G001880	Cla008789	Watermelon (97103) v1	cucwmB209
CsaV3_3G001880	MELO3C013862	Melon (DHL92) v3.5.1	cucmeB246
CsaV3_3G001880	ClCG10G001790	Watermelon (Charleston Gray)	cucwcgB194
CsaV3_3G001880	Lsi07G012160	Bottle gourd (USVL1VR-Ls)	cuclsiB250
CsaV3_3G001880	MELO3C013862.2	Melon (DHL92) v3.6.1	cucmedB231
CsaV3_3G001880	Cla97C10G186410	Watermelon (97103) v2	cucwmbB182
CsaV3_3G001880	Bhi11G000120	Wax gourd	cucwgoB242

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_3G001880	Cucumber (Chinese Long) v3	cuccucB109
CsaV3_3G001880	Cucumber (Chinese Long) v3	cuccucB113
CsaV3_3G001880	Silver-seed gourd	carcucB0821
CsaV3_3G001880	Cucumber (Gy14) v2	cgybcucB119
CsaV3_3G001880	Cucumber (Gy14) v2	cgybcucB123
CsaV3_3G001880	Cucumber (Gy14) v1	cgycucB390
CsaV3_3G001880	Cucumber (Gy14) v1	cgycucB488
CsaV3_3G001880	Cucurbita maxima (Rimu)	cmacucB0297
CsaV3_3G001880	Cucurbita maxima (Rimu)	cmacucB0626
CsaV3_3G001880	Cucurbita maxima (Rimu)	cmacucB0718
CsaV3_3G001880	Cucurbita maxima (Rimu)	cmacucB0975
CsaV3_3G001880	Cucurbita moschata (Rifu)	cmocucB0288
CsaV3_3G001880	Cucurbita moschata (Rifu)	cmocucB0609
CsaV3_3G001880	Cucurbita moschata (Rifu)	cmocucB0705
CsaV3_3G001880	Cucurbita moschata (Rifu)	cmocucB0961
CsaV3_3G001880	Cucurbita pepo (Zucchini)	cpecucB0309
CsaV3_3G001880	Cucurbita pepo (Zucchini)	cpecucB0764
CsaV3_3G001880	Cucurbita pepo (Zucchini)	cpecucB0895
CsaV3_3G001880	Wild cucumber (PI 183967)	cpicucB147
CsaV3_3G001880	Wild cucumber (PI 183967)	cpicucB151
CsaV3_3G001880	Bottle gourd (USVL1VR-Ls)	cuclsiB244
CsaV3_3G001880	Melon (DHL92) v3.5.1	cucmeB222
CsaV3_3G001880	Melon (DHL92) v3.5.1	cucmeB244
CsaV3_3G001880	Melon (DHL92) v3.6.1	cucmedB215
CsaV3_3G001880	Melon (DHL92) v3.6.1	cucmedB243
CsaV3_3G001880	Watermelon (Charleston Gray)	cucwcgB184
CsaV3_3G001880	Watermelon (Charleston Gray)	cucwcgB232
CsaV3_3G001880	Watermelon (97103) v1	cucwmB193
CsaV3_3G001880	Watermelon (97103) v1	cucwmB249
CsaV3_3G001880	Watermelon (97103) v2	cucwmbB255
CsaV3_3G001880	Wax gourd	cucwgoB315