CsaV3_3G001170 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTTTGTTATATTTTATAAATGTTTGCCCTTTAATGTAATTCTCTTTATCATAACGTATGTGTAAGAATTGTTTAGCAAAATCTTGTCAAATCATACAAAATTAACTTATAAATAATACCGGCTAAATTCTACATTTTTTTTTCATGATTCCTTTGCAGTTTACCATATTTTAAACTAAAAAGAGCAAATAGAAAGAGAGAGAGAAAGGAGAGTACATGAAGAAAGATGCCAAAATATACATAACCAATGCCTGACATTCTCACTGATCATATCGAAAGTCCTCTTTCAACCTTCATTGAATCTCTCGCTCCACCAGCTGTTGCCTCACCAAATTCCGTCCAACTCCCCCATTTTAATACTCTCCCCCCTCAACGCCAAAATTTGGCCTAATATTTTCACTTCGGCTTTTCATCAAACAACTTGCAATCGAGCATAACATCTCCATCGACCACCATGACAGAGCAAAGCCCGAGACCAAAGCAATCAGAAATCCATAACTTACCTCCACCGAAGTCCACCAGCGCCCGGAGCGTGTCGACACCGAGGTCGGCCACCAGCGGCGGTGGCGGAGGAAGCCGGAGGGAAACGCCGGATTTCCACAGCACGGCAGCAAAGCTGGAGAGAGCGAAGGAGGTGTATAGGGCGTATGAAGGGCATGGAGAAAGGCCGACGATTGCGGAGATTTTGGGATGGTGTTTCTATGAACTTTGCTCGTTTTTCGTTTTGGCGTTGTTGATTCCAGTTGTGTTTCCGTTGATAATTAGTCAGATTAGTGGGCCTCCGACGGCGCCGCCGCAGGGATGGTTTAAGAGCTTTAGGGGCTTCGATTGCTCTTCAAGAGAAATGCAATTGTAAGTCTTCTCTATGTCTTTCTTTTTTGGGTTGTAGAATGATATCCTCTTACTCATCATTTTTTGATTTTTTTTTCTCAATTTAGTATATGAATTTTAAAATATTATGTTTTATTTTTTAAAATTTAAAATGATATTACCATTTAGTTTCAACATCTACGCATCTAATTTTGACTTTTCACACAATATTCATTTTTTAACTTTAATATTTATTAATTAATTTTTAATATATGACATTTTCAAATATAGTAAAATTTTAAATTTAATCGAATAGAAACCGATACACTTCCACGAATATTTATTATTATAGAAAATGAAATTTTGTTATATTTTTTAAATTTTATTATTTTTAACCATTTTTCTTTAAATAATTTAAAATTTATAATTTTTATATATAACATGATGAACTATAAAATTTATAAATATAGCAAACTATAACGGTCAGATAATGAGCTATATATATGAATATATATATATATATATGAATACTGTAGGTTTGATAGTTTATTGCAATTTATTACACATCAACTATGATGTTTTGATAATTTTTTCTGTTTTAAAAACTAAAAATAATTAAATTTAACTATTTTATATATTGTTAAATTATATATATTATTTTTAAATGTTACTTTTGCAAGGACTTAATAGATATTGATGTTAGTAATTGAAATCGGACAACTAATGAAAACTGGAGGTTGAAATGTAGCTCAAAACTTACGAACTAGATCAAAACATAGACTTAAAACTCAACTTAAGATTATAGCATTTTTAAATTTTACAAAATAAAATTGTATGTATTTTGTAAGAGACGAATATAAAGATGGTTATTATTATTAGCTAAAAATTGGGAAAATAACAAAGAAAGTACACGTGGGGTTCTTTTTTATTGGATGGATGCAGGTACCAAAGTCTAACAGAGCAAACAATAAACGTATCCAACGCCCAATTCTCGCCATTAATATGGACCTCAATTTCATGGGCTGTGGGTTTGGTTCTGGCCGGCCCAATCCTCGCCGTCGCTTCCTTCCACCTCGATTACGGATTCCATCAATACCTCATCACTCTCGCTGCCGTCGCCGCCGGAGCCCTCACGTGTCTTCCGACAGGTTTCTTCAAAACGGTCAAGATTTTTCCTCTTTACATTATTTTAATCGTCATTGCTCACTCTGTCGCCTCCACCTCCCACACGCGCCACCTCGGCCTCATGCTCCGTGGCCTCACTGGACCGATTATCCACAAAGCCAAATTTTCCCTCAGAATAATCGGATCCGGTCAGATTTCGTCCTGGTCTGCCGGCGTCGGCGGTGTGGGTGCCGCTGCTATCTCCGCCTTCACTTACCACATGCTTCGAAGGTATTATTTCACTTTTATAAATAAACCGAAAATATTTTAGAAATAAAAAATTTGAACCACCACGTCGTTTGAAATTCTTTAGAATTTATACTTTAAAGTAGTTTTGAAAACCAACGTTATGATTTAGTATTAAAATCTTAATTTGACTATGATTTTACTCTTGGAATCCTTTTATTAATAATAATAAACTTTCAAATTATTTTAAATAGCTTTACTTTTATACTTTTTTTTAAGAAAAAAAAGAGCAATTCATTCATGACACAACACTAAAACTGAAGAGTACACATGTAAAAAAATCCTTTTACTTTAGGAAGTTACAAAGTTACATTTCATTTGAGTATCATTAACAATAATTTCGGGAATTAAAAAATAAATAATAAAAACAGCAACAAGAAAATTGTTTAAAAAGTTGTTTTTGTTTTTAAAAATTATAGAAATTCAAATATTAATAAGAATATGTGTGGAAGAAAAGCACAATTAAAAAATAATAATAACAAAATGATTATGAGAGAGATATTCAGTTTAGAGAATTGGAATATTCTTAATTTATTGTTATTATTATTATTTGCTCTAACTCTGCATGCTTTTTCAATTATCAGTGACAAGCAAGTTCAAGGAATCGACAGCCACTTCCTCAACCTATGGATCGTCACGATCTTCGCCGGCCTAAAATGGCTTATCGGAATTTTTCATGTCTTCCTCACAAATCGATCAATCTCTGTATCAATTCCTTCCGATTCAGAGATTCACATTCTTTCAATTTTTAAATATCCTCACGCAATCGCCACCGTTATCTCCGGCGGATTCCTCTCTTCCTTCGCCACAATCTCCATCTTCACTTCCGTTTTACTCTTCCTGATCAGCCAAATCTGCTTCAAGCCAGTTTTAATCTTCTATCTATTGTTAATCTACTTCCTCGTCCCTCTAATTTCTCTTCCATTACTCCATCAACTTCAGATCCGAATCAAAGCCGACGCCTCAAAAATGCTGATTCTTGGGTTCATCCTCTCCGCCGCCACTTCCGCCACCTGTTTCTACTTCCACGCCTACGCGTGGCAGCGGCACCTGGTCTTCGTCTTTGCCGTTCTTCAAGGCACGGCAGCGGCGGTTCTTCATGCGTACGGAAGAGCTTTAGTGGTTCATTGTTCGCCTGCAGGGAAGGAAAGTGCGATTTCGATGTGGTTTTCATGGATGCGAGCAATCGGCGGTTGCGTTGGATTTACGGTTGCGGCGGTGGTTCCGACGATGTTGCAGGTTTCTTCCGGTGTGGTGTTTTGTTGCGCCGTCGTTGGAGGAATGTTGTTGATTTTCGGTAATGTTACTGATTACGATGGCGCTGTGGCGGCGGGGCATGTGAGAGATGACAGTGAAAAGGGTTCGCCGGTATTTGGACTGGATTCTCGGAGTGAGAGTAAAGAACTTGAGTCGCCCTGAGAATTTTGAACGATCGTTTTAATTTATTTACGATTTTTGAATATTCTTTGCTCGTAATAAAAAGGGGTTTTTTCAAAACCAAATTGTGAATCAATTCTTCTTTTTTGGTTTGTTTATTTATTTATATTTTTTTTATACGAGAGGGAAATTCAAACCTCAATCATGG ATGACAGAGCAAAGCCCGAGACCAAAGCAATCAGAAATCCATAACTTACCTCCACCGAAGTCCACCAGCGCCCGGAGCGTGTCGACACCGAGGTCGGCCACCAGCGGCGGTGGCGGAGGAAGCCGGAGGGAAACGCCGGATTTCCACAGCACGGCAGCAAAGCTGGAGAGAGCGAAGGAGGTGTATAGGGCGTATGAAGGGCATGGAGAAAGGCCGACGATTGCGGAGATTTTGGGATGGTGTTTCTATGAACTTTGCTCGTTTTTCGTTTTGGCGTTGTTGATTCCAGTTGTGTTTCCGTTGATAATTAGTCAGATTAGTGGGCCTCCGACGGCGCCGCCGCAGGGATGGTTTAAGAGCTTTAGGGGCTTCGATTGCTCTTCAAGAGAAATGCAATTGTACCAAAGTCTAACAGAGCAAACAATAAACGTATCCAACGCCCAATTCTCGCCATTAATATGGACCTCAATTTCATGGGCTGTGGGTTTGGTTCTGGCCGGCCCAATCCTCGCCGTCGCTTCCTTCCACCTCGATTACGGATTCCATCAATACCTCATCACTCTCGCTGCCGTCGCCGCCGGAGCCCTCACGTGTCTTCCGACAGGTTTCTTCAAAACGGTCAAGATTTTTCCTCTTTACATTATTTTAATCGTCATTGCTCACTCTGTCGCCTCCACCTCCCACACGCGCCACCTCGGCCTCATGCTCCGTGGCCTCACTGGACCGATTATCCACAAAGCCAAATTTTCCCTCAGAATAATCGGATCCGGTCAGATTTCGTCCTGGTCTGCCGGCGTCGGCGGTGTGGGTGCCGCTGCTATCTCCGCCTTCACTTACCACATGCTTCGAAGTGACAAGCAAGTTCAAGGAATCGACAGCCACTTCCTCAACCTATGGATCGTCACGATCTTCGCCGGCCTAAAATGGCTTATCGGAATTTTTCATGTCTTCCTCACAAATCGATCAATCTCTGTATCAATTCCTTCCGATTCAGAGATTCACATTCTTTCAATTTTTAAATATCCTCACGCAATCGCCACCGTTATCTCCGGCGGATTCCTCTCTTCCTTCGCCACAATCTCCATCTTCACTTCCGTTTTACTCTTCCTGATCAGCCAAATCTGCTTCAAGCCAGTTTTAATCTTCTATCTATTGTTAATCTACTTCCTCGTCCCTCTAATTTCTCTTCCATTACTCCATCAACTTCAGATCCGAATCAAAGCCGACGCCTCAAAAATGCTGATTCTTGGGTTCATCCTCTCCGCCGCCACTTCCGCCACCTGTTTCTACTTCCACGCCTACGCGTGGCAGCGGCACCTGGTCTTCGTCTTTGCCGTTCTTCAAGGCACGGCAGCGGCGGTTCTTCATGCGTACGGAAGAGCTTTAGTGGTTCATTGTTCGCCTGCAGGGAAGGAAAGTGCGATTTCGATGTGGTTTTCATGGATGCGAGCAATCGGCGGTTGCGTTGGATTTACGGTTGCGGCGGTGGTTCCGACGATGTTGCAGGTTTCTTCCGGTGTGGTGTTTTGTTGCGCCGTCGTTGGAGGAATGTTGTTGATTTTCGGTAATGTTACTGATTACGATGGCGCTGTGGCGGCGGGGCATGTGAGAGATGACAGTGAAAAGGGTTCGCCGGTATTTGGACTGGATTCTCGGAGTGAGAGTAAAGAACTTGAGTCGCCCTGA ATGACAGAGCAAAGCCCGAGACCAAAGCAATCAGAAATCCATAACTTACCTCCACCGAAGTCCACCAGCGCCCGGAGCGTGTCGACACCGAGGTCGGCCACCAGCGGCGGTGGCGGAGGAAGCCGGAGGGAAACGCCGGATTTCCACAGCACGGCAGCAAAGCTGGAGAGAGCGAAGGAGGTGTATAGGGCGTATGAAGGGCATGGAGAAAGGCCGACGATTGCGGAGATTTTGGGATGGTGTTTCTATGAACTTTGCTCGTTTTTCGTTTTGGCGTTGTTGATTCCAGTTGTGTTTCCGTTGATAATTAGTCAGATTAGTGGGCCTCCGACGGCGCCGCCGCAGGGATGGTTTAAGAGCTTTAGGGGCTTCGATTGCTCTTCAAGAGAAATGCAATTGTACCAAAGTCTAACAGAGCAAACAATAAACGTATCCAACGCCCAATTCTCGCCATTAATATGGACCTCAATTTCATGGGCTGTGGGTTTGGTTCTGGCCGGCCCAATCCTCGCCGTCGCTTCCTTCCACCTCGATTACGGATTCCATCAATACCTCATCACTCTCGCTGCCGTCGCCGCCGGAGCCCTCACGTGTCTTCCGACAGGTTTCTTCAAAACGGTCAAGATTTTTCCTCTTTACATTATTTTAATCGTCATTGCTCACTCTGTCGCCTCCACCTCCCACACGCGCCACCTCGGCCTCATGCTCCGTGGCCTCACTGGACCGATTATCCACAAAGCCAAATTTTCCCTCAGAATAATCGGATCCGGTCAGATTTCGTCCTGGTCTGCCGGCGTCGGCGGTGTGGGTGCCGCTGCTATCTCCGCCTTCACTTACCACATGCTTCGAAGTGACAAGCAAGTTCAAGGAATCGACAGCCACTTCCTCAACCTATGGATCGTCACGATCTTCGCCGGCCTAAAATGGCTTATCGGAATTTTTCATGTCTTCCTCACAAATCGATCAATCTCTGTATCAATTCCTTCCGATTCAGAGATTCACATTCTTTCAATTTTTAAATATCCTCACGCAATCGCCACCGTTATCTCCGGCGGATTCCTCTCTTCCTTCGCCACAATCTCCATCTTCACTTCCGTTTTACTCTTCCTGATCAGCCAAATCTGCTTCAAGCCAGTTTTAATCTTCTATCTATTGTTAATCTACTTCCTCGTCCCTCTAATTTCTCTTCCATTACTCCATCAACTTCAGATCCGAATCAAAGCCGACGCCTCAAAAATGCTGATTCTTGGGTTCATCCTCTCCGCCGCCACTTCCGCCACCTGTTTCTACTTCCACGCCTACGCGTGGCAGCGGCACCTGGTCTTCGTCTTTGCCGTTCTTCAAGGCACGGCAGCGGCGGTTCTTCATGCGTACGGAAGAGCTTTAGTGGTTCATTGTTCGCCTGCAGGGAAGGAAAGTGCGATTTCGATGTGGTTTTCATGGATGCGAGCAATCGGCGGTTGCGTTGGATTTACGGTTGCGGCGGTGGTTCCGACGATGTTGCAGGTTTCTTCCGGTGTGGTGTTTTGTTGCGCCGTCGTTGGAGGAATGTTGTTGATTTTCGGTAATGTTACTGATTACGATGGCGCTGTGGCGGCGGGGCATGTGAGAGATGACAGTGAAAAGGGTTCGCCGGTATTTGGACTGGATTCTCGGAGTGAGAGTAAAGAACTTGAGTCGCCCTGA MTEQSPRPKQSEIHNLPPPKSTSARSVSTPRSATSGGGGGSRRETPDFHSTAAKLERAKEVYRAYEGHGERPTIAEILGWCFYELCSFFVLALLIPVVFPLIISQISGPPTAPPQGWFKSFRGFDCSSREMQLYQSLTEQTINVSNAQFSPLIWTSISWAVGLVLAGPILAVASFHLDYGFHQYLITLAAVAAGALTCLPTGFFKTVKIFPLYIILIVIAHSVASTSHTRHLGLMLRGLTGPIIHKAKFSLRIIGSGQISSWSAGVGGVGAAAISAFTYHMLRSDKQVQGIDSHFLNLWIVTIFAGLKWLIGIFHVFLTNRSISVSIPSDSEIHILSIFKYPHAIATVISGGFLSSFATISIFTSVLLFLISQICFKPVLIFYLLLIYFLVPLISLPLLHQLQIRIKADASKMLILGFILSAATSATCFYFHAYAWQRHLVFVFAVLQGTAAAVLHAYGRALVVHCSPAGKESAISMWFSWMRAIGGCVGFTVAAVVPTMLQVSSGVVFCCAVVGGMLLIFGNVTDYDGAVAAGHVRDDSEKGSPVFGLDSRSESKELESP
BLAST of CsaV3_3G001170 vs. NCBI nr
Match: XP_011652708.1 (PREDICTED: uncharacterized protein LOC105435055 [Cucumis sativus] >KGN55703.1 hypothetical protein Csa_3G006650 [Cucumis sativus]) HSP 1 Score: 1022.3 bits (2642), Expect = 6.2e-295 Identity = 561/561 (100.00%), Postives = 561/561 (100.00%), Query Frame = 0
BLAST of CsaV3_3G001170 vs. NCBI nr
Match: XP_008448612.1 (PREDICTED: uncharacterized protein LOC103490734 [Cucumis melo]) HSP 1 Score: 930.6 bits (2404), Expect = 2.5e-267 Identity = 491/560 (87.68%), Postives = 512/560 (91.43%), Query Frame = 0
BLAST of CsaV3_3G001170 vs. NCBI nr
Match: XP_022965332.1 (uncharacterized protein LOC111465229 isoform X1 [Cucurbita maxima]) HSP 1 Score: 797.0 bits (2057), Expect = 4.2e-227 Identity = 433/562 (77.05%), Postives = 481/562 (85.59%), Query Frame = 0
BLAST of CsaV3_3G001170 vs. NCBI nr
Match: XP_022965333.1 (uncharacterized protein LOC111465229 isoform X2 [Cucurbita maxima]) HSP 1 Score: 795.4 bits (2053), Expect = 1.2e-226 Identity = 432/561 (77.01%), Postives = 480/561 (85.56%), Query Frame = 0
BLAST of CsaV3_3G001170 vs. NCBI nr
Match: XP_022923220.1 (uncharacterized protein LOC111430980 isoform X1 [Cucurbita moschata]) HSP 1 Score: 729.2 bits (1881), Expect = 1.1e-206 Identity = 378/487 (77.62%), Postives = 420/487 (86.24%), Query Frame = 0
BLAST of CsaV3_3G001170 vs. TrEMBL
Match: tr|A0A0A0L1Q8|A0A0A0L1Q8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G006650 PE=4 SV=1) HSP 1 Score: 1022.3 bits (2642), Expect = 4.1e-295 Identity = 561/561 (100.00%), Postives = 561/561 (100.00%), Query Frame = 0
BLAST of CsaV3_3G001170 vs. TrEMBL
Match: tr|A0A1S3BK45|A0A1S3BK45_CUCME (uncharacterized protein LOC103490734 OS=Cucumis melo OX=3656 GN=LOC103490734 PE=4 SV=1) HSP 1 Score: 930.6 bits (2404), Expect = 1.6e-267 Identity = 491/560 (87.68%), Postives = 512/560 (91.43%), Query Frame = 0
BLAST of CsaV3_3G001170 vs. TrEMBL
Match: tr|A0A251P603|A0A251P603_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G024200 PE=4 SV=1) HSP 1 Score: 471.1 bits (1211), Expect = 3.5e-129 Identity = 254/516 (49.22%), Postives = 352/516 (68.22%), Query Frame = 0
BLAST of CsaV3_3G001170 vs. TrEMBL
Match: tr|A0A1J6IXV9|A0A1J6IXV9_NICAT (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_18732 PE=4 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 2.3e-128 Identity = 249/510 (48.82%), Postives = 334/510 (65.49%), Query Frame = 0
BLAST of CsaV3_3G001170 vs. TrEMBL
Match: tr|D7TDU1|D7TDU1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_04s0043g00780 PE=4 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 2.5e-127 Identity = 254/521 (48.75%), Postives = 343/521 (65.83%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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