CsaV3_2G036600 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G036600
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Polyprotein
Location	chr2 : 24717337 .. 24718803 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAATGTTAATTCAGGCTCGTCCACAGCTGATGATTTTGCTCGAAGAATAGAGGCATCATTGAGGGCTGCAATAAGTCAGCATGAAGCAGCAATACAGTCTCTTCCAGCACCGGTAAGACAAGAAGTCGAGACTGCAGCAACAGAGCAGGCAGAAAACTCGGTGGGGGCAATTGTTCGATTAAGGAACGAGGAACGTGGGAAAGGTACAGCAGCTGATACTTCTGTCAAACCTCAAGCGTCCCAAAAAGCTCCACAAGTAGCTCCTGCAGTTATCAACCCTGTACCTGCCCCTATTGCTGCACAACCAGCAACTGTAGGGAATATAATTCCTAGAATCGTGGGACCTCTAGAAGCAGATGTAATAGGCATTAGGGGAATGCAACTAGTACATAGGGAAGAACTGCCGGACGTCGGATATCTCCACCCTGGATTTATAAGAGAGTTAGAGTGGAGTGACGGTATTTTAAGAGAAATGGGAGGACGACTGTCAATCCTTCCAGATGCGGATTTAAAAGAGCATGCAGAAAGACTGTGGAGAGGACTAACAGTACAATGTACAAATAGAGTCACCGGAATTGCAATGCTGTACATTAGCTTGGAACCTCCTTTCACCATTAAATCCGCAGGAAACCGTATATAATGCCATTGACTATTTTACAACCCCAAGAGACCAGCACGTCAACTCTCTTTCTGAACAAATTTTAGGCGTGGGGAATGCAAGAAATCCTGAACTATCTGATGTCCCACTGGCAGATCTTATTAAGAGTTCATGTTATATAGCAGCCAGTTTATTAAGGTTATTTACCTAAAAGACAGGTAGCTGGGAAAAAGCTTATGCAGGTGATCTGAAGGAGAATTATTTGAAGATTTACAAAGAGCAGTTTCCGATTGATGCTCCTGTGTTATCAAAGGCTTGCATTGATGGATTTGTCTGGGCATTTCAGAATGTCTCCATTTTGAAAGGAACATTGGGGAGGTTCTTATACAACTTTAGCAGCCTTGGAGACGGAAACGTGGGAAAGGGTTTGGCAACAATGTTATTTGAACAACATTTAGGGTTTACATGCATGCATTAAGTCTGTTCATTAGGGTAGCATCATCACTGAACCTTTCTCCAAAAGATCTAACTAAAGCCTGCTGGCATAAGCTGACAAAGATGCCTTTGAACTCATTGGTAACTATTTTGTCCAAAGTAACTGCAGAAAGTAATATTGCAGGGGCACCAAATGTAAGAGGGACCTGGAAATATGCAAGAGTTTTTGGCAGTGAATACTTTATCGGAATCCAATCTAAAAGGTGTCCCATCTTATTCTGTTTGTTAGCAATGATCTGTGAAAGAATTGGAGACATGGGGAATCAAGATCCACCGGAGACTAGAGCCATCTATAGAAGATGGGCAAATAGGATATGTGACTTCTATATGCCGACCTTGTTTTTTTCTTTTAAATTTGCTTATGATTGA

mRNA sequence

ATGGCAAATGTTAATTCAGGCTCGTCCACAGCTGATGATTTTGCTCGAAGAATAGAGGCATCATTGAGGGCTGCAATAAGTCAGCATGAAGCAGCAATACAGTCTCTTCCAGCACCGGTAAGACAAGAAGTCGAGACTGCAGCAACAGAGCAGGCAGAAAACTCGGTGGGGGCAATTGTTCGATTAAGGAACGAGGAACGTGGGAAAGGTACAGCAGCTGATACTTCTGTCAAACCTCAAGCGTCCCAAAAAGCTCCACAAGTAGCTCCTGCAGTTATCAACCCTGTACCTGCCCCTATTGCTGCACAACCAGCAACTGTAGGGAATATAATTCCTAGAATCGTGGGACCTCTAGAAGCAGATGTAATAGGCATTAGGGGAATGCAACTAGTACATAGGGAAGAACTGCCGGACGTCGGATATCTCCACCCTGGATTTATAAGAGAGTTAGAGTGGAGTGACGGTATTTTAAGAGAAATGGGAGGACGACTGTCAATCCTTCCAGATGCGGATTTAAAAGAGCATGCAGAAAGACTGTGGAGAGGACTAACAGTACAATGTACAAATAGAGTCACCGGAATTGCAATGCTGTACATTAGCTTGGAACCTCCTTTCACCATTAAATCCGCAGGAAACCGTAGCTGGGAAAAAGCTTATGCAGGTGATCTGAAGGAGAATTATTTGAAGATTTACAAAGAGCAGTTTCCGATTGATGCTCCTGTGTTATCAAAGGCTTGCATTGATGGATTTGTCTGGGCATTTCAGAATGTCTCCATTTTGAAAGGAACATTGGGGAGGGTAGCATCATCACTGAACCTTTCTCCAAAAGATCTAACTAAAGCCTGCTGGCATAAGCTGACAAAGATGCCTTTGAACTCATTGGTAACTATTTTGTCCAAAGTAACTGCAGAAAGTAATATTGCAGGGGCACCAAATGTAAGAGGGACCTGGAAATATGCAAGAGTTTTTGGCAGTGAATACTTTATCGGAATCCAATCTAAAAGGTGTCCCATCTTATTCTGTTTGTTAGCAATGATCTGTGAAAGAATTGGAGACATGGGGAATCAAGATCCACCGGAGACTAGAGCCATCTATAGAAGATGGGCAAATAGGATATGTGACTTCTATATGCCGACCTTGTTTTTTTCTTTTAAATTTGCTTATGATTGA

Coding sequence (CDS)

ATGGCAAATGTTAATTCAGGCTCGTCCACAGCTGATGATTTTGCTCGAAGAATAGAGGCATCATTGAGGGCTGCAATAAGTCAGCATGAAGCAGCAATACAGTCTCTTCCAGCACCGGTAAGACAAGAAGTCGAGACTGCAGCAACAGAGCAGGCAGAAAACTCGGTGGGGGCAATTGTTCGATTAAGGAACGAGGAACGTGGGAAAGGTACAGCAGCTGATACTTCTGTCAAACCTCAAGCGTCCCAAAAAGCTCCACAAGTAGCTCCTGCAGTTATCAACCCTGTACCTGCCCCTATTGCTGCACAACCAGCAACTGTAGGGAATATAATTCCTAGAATCGTGGGACCTCTAGAAGCAGATGTAATAGGCATTAGGGGAATGCAACTAGTACATAGGGAAGAACTGCCGGACGTCGGATATCTCCACCCTGGATTTATAAGAGAGTTAGAGTGGAGTGACGGTATTTTAAGAGAAATGGGAGGACGACTGTCAATCCTTCCAGATGCGGATTTAAAAGAGCATGCAGAAAGACTGTGGAGAGGACTAACAGTACAATGTACAAATAGAGTCACCGGAATTGCAATGCTGTACATTAGCTTGGAACCTCCTTTCACCATTAAATCCGCAGGAAACCGTAGCTGGGAAAAAGCTTATGCAGGTGATCTGAAGGAGAATTATTTGAAGATTTACAAAGAGCAGTTTCCGATTGATGCTCCTGTGTTATCAAAGGCTTGCATTGATGGATTTGTCTGGGCATTTCAGAATGTCTCCATTTTGAAAGGAACATTGGGGAGGGTAGCATCATCACTGAACCTTTCTCCAAAAGATCTAACTAAAGCCTGCTGGCATAAGCTGACAAAGATGCCTTTGAACTCATTGGTAACTATTTTGTCCAAAGTAACTGCAGAAAGTAATATTGCAGGGGCACCAAATGTAAGAGGGACCTGGAAATATGCAAGAGTTTTTGGCAGTGAATACTTTATCGGAATCCAATCTAAAAGGTGTCCCATCTTATTCTGTTTGTTAGCAATGATCTGTGAAAGAATTGGAGACATGGGGAATCAAGATCCACCGGAGACTAGAGCCATCTATAGAAGATGGGCAAATAGGATATGTGACTTCTATATGCCGACCTTGTTTTTTTCTTTTAAATTTGCTTATGATTGA

Protein sequence

MANVNSGSSTADDFARRIEASLRAAISQHEAAIQSLPAPVRQEVETAATEQAENSVGAIVRLRNEERGKGTAADTSVKPQASQKAPQVAPAVINPVPAPIAAQPATVGNIIPRIVGPLEADVIGIRGMQLVHREELPDVGYLHPGFIRELEWSDGILREMGGRLSILPDADLKEHAERLWRGLTVQCTNRVTGIAMLYISLEPPFTIKSAGNRSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDGFVWAFQNVSILKGTLGRVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPETRAIYRRWANRICDFYMPTLFFSFKFAYD

Homology

[Close]

BLAST of CsaV3_2G036600 vs. NCBI nr
Match: KGN63419.1 (hypothetical protein Csa_2G441740 [Cucumis sativus])

HSP 1 Score: 733.0 bits (1891), Expect = 5.2e-208
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MANVNSGSSTADDFARRIEASLRAAISQHEAAIQSLPAPVRQEVETAATEQAENSVGAIV 60
           MANVNSGSSTADDFARRIEASLRAAISQHEAAIQSLPAPVRQEVETAATEQAENSVGAIV
Sbjct: 1   MANVNSGSSTADDFARRIEASLRAAISQHEAAIQSLPAPVRQEVETAATEQAENSVGAIV 60

Query: 61  RLRNEERGKGTAADTSVKPQXXXXXXXXXXXXXXXXXXXXXXXPATVGNIIPRIVGPLEA 120
           RLRNEERGKGTAADTSVKPQXXXXXXXXXXXXXXXXXXXXXXXPATVGNIIPRIVGPLEA
Sbjct: 61  RLRNEERGKGTAADTSVKPQXXXXXXXXXXXXXXXXXXXXXXXPATVGNIIPRIVGPLEA 120

Query: 121 DVIGIRGMQLVHREELPDVGYLHPGFIRELEWSDGILREMGGRLSILPDADLKEHAERLW 180
           DVIGIRGMQLVHREELPDVGYLHPGFIRELEWSDGILREMGGRLSILPDADLKEHAERLW
Sbjct: 121 DVIGIRGMQLVHREELPDVGYLHPGFIRELEWSDGILREMGGRLSILPDADLKEHAERLW 180

Query: 181 RGLTVQCTNRVTGIAMLYISLEPPFTIKSAGNRSWEKAYAGDLKENYLKIYKEQFPIDAP 240
           RGLTVQCTNRVTGIAMLYISLEPPFTIKSAGNRSWEKAYAGDLKENYLKIYKEQFPIDAP
Sbjct: 181 RGLTVQCTNRVTGIAMLYISLEPPFTIKSAGNRSWEKAYAGDLKENYLKIYKEQFPIDAP 240

Query: 241 VLSKACIDGFVWAFQNVSILKGTLGRVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSK 300
           VLSKACIDGFVWAFQNVSILKGTLGRVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSK
Sbjct: 241 VLSKACIDGFVWAFQNVSILKGTLGRVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSK 300

Query: 301 VTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPE 360
           VTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPE
Sbjct: 301 VTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPE 360

Query: 361 TRAIYRRWANRICDFYMPTLFFSFKFAYD 390
           TRAIYRRWANRICDFYMPTLFFSFKFAYD
Sbjct: 361 TRAIYRRWANRICDFYMPTLFFSFKFAYD 389

[Close]

BLAST of CsaV3_2G036600 vs. NCBI nr
Match: YP_009130617.1 (polyprotein [Black grass varicosavirus-like virus] >CDF65984.1 coat protein [uncultured varicosavirus] >CEK42598.1 polyprotein [Black grass varicosavirus-like virus])

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-09
Identity = 60/215 (27.91%), Postives = 91/215 (42.33%), Query Frame = 0


Query: 208 KSAGN--RSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDG---------------- 267
           KSA N  R++E+     +K  Y + YK++FP+      + CI+G                
Sbjct: 273 KSAENYVRAFEQ-----IKAKYYRFYKDEFPLTYLTPDRRCIEGLKEIYTNKEVYRNALL 332

Query: 268 -FVWAFQNVSILKG-----------TLGRVASSL--------NLSPKDLTKACWHKLTKM 327
            F+++F  ++  KG             G  A SL        +  P++L+   WH+ T+ 
Sbjct: 333 PFLYSFSELTDPKGMCRLLYEQHLALTGMHAVSLFVKVCLGSHCLPEELSSGLWHRTTRD 392

Query: 328 PLNSLVTILSKVTAESNIAGA--PNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMIC 373
            L  +  IL      S+  G      +GTW YAR+    YF  IQ+K C  L C LA + 
Sbjct: 393 ALREIKDIL-----VSHFLGGIDGQEKGTWMYARLLNDAYFSRIQTKNCKNLVCALAYMA 452

[Close]

BLAST of CsaV3_2G036600 vs. NCBI nr
Match: XP_015895577.1 (uncharacterized protein LOC107429412 [Ziziphus jujuba])

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-05
Identity = 33/87 (37.93%), Postives = 50/87 (57.47%), Query Frame = 0


Query: 266 RVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSKVTAESNIAGAPNVRGTWKYARVFGS 325
           RVA+ LN +P DL+ A  H++T+  L  +  IL      ++       R TWKYAR+F  
Sbjct: 250 RVATKLNATPDDLSLALDHRMTRRGLVVVKKILLNFDRSTD---DKQRRQTWKYARLFDE 309

Query: 326 EYFIGIQSKRCPILFCLLAMICERIGD 353
           E F+ + +K C  L  +LAMI E++G+
Sbjct: 310 EMFVDLMTKNCGELTFILAMILEKMGE 333

[Close]

BLAST of CsaV3_2G036600 vs. NCBI nr
Match: XP_008358190.1 (PREDICTED: uncharacterized protein LOC103421926 isoform X1 [Malus domestica])

HSP 1 Score: 58.5 bits (140), Expect = 5.7e-05
Identity = 36/102 (35.29%), Postives = 51/102 (50.00%), Query Frame = 0


Query: 266 RVASSLNLSPKDLTKAC-WHKLTKMPLNSLVTILSKVTAESNIAG--APNVRGTWKYARV 325
           R  + L   P DL KA   H  T M   S++  L ++  ES I        R T++YAR+
Sbjct: 311 RAVTGLQCQPTDLMKALHTHTHTSMXKKSILDEL-RIIIESYIGSEEEDKKRRTFQYARL 370

Query: 326 FGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPETRAI 365
           F S+ F  +QSK C  L C+LA +C++ G  G  D  +   I
Sbjct: 371 FDSQMFGNLQSKNCAHLVCILAYLCQQCGSAGXGDXTQIAVI 411

[Close]

BLAST of CsaV3_2G036600 vs. NCBI nr
Match: XP_008358191.1 (PREDICTED: uncharacterized protein LOC103421926 isoform X2 [Malus domestica])

HSP 1 Score: 58.5 bits (140), Expect = 5.7e-05
Identity = 36/102 (35.29%), Postives = 51/102 (50.00%), Query Frame = 0


Query: 266 RVASSLNLSPKDLTKAC-WHKLTKMPLNSLVTILSKVTAESNIAG--APNVRGTWKYARV 325
           R  + L   P DL KA   H  T M   S++  L ++  ES I        R T++YAR+
Sbjct: 237 RAVTGLQCQPTDLMKALHTHTHTSMXKKSILDEL-RIIIESYIGSEEEDKKRRTFQYARL 296

Query: 326 FGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPETRAI 365
           F S+ F  +QSK C  L C+LA +C++ G  G  D  +   I
Sbjct: 297 FDSQMFGNLQSKNCAHLVCILAYLCQQCGSAGXGDXTQIAVI 337

[Close]

BLAST of CsaV3_2G036600 vs. TrEMBL
Match: tr|A0A0A0LR10|A0A0A0LR10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G441740 PE=4 SV=1)

HSP 1 Score: 733.0 bits (1891), Expect = 3.4e-208
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MANVNSGSSTADDFARRIEASLRAAISQHEAAIQSLPAPVRQEVETAATEQAENSVGAIV 60
           MANVNSGSSTADDFARRIEASLRAAISQHEAAIQSLPAPVRQEVETAATEQAENSVGAIV
Sbjct: 1   MANVNSGSSTADDFARRIEASLRAAISQHEAAIQSLPAPVRQEVETAATEQAENSVGAIV 60

Query: 61  RLRNEERGKGTAADTSVKPQXXXXXXXXXXXXXXXXXXXXXXXPATVGNIIPRIVGPLEA 120
           RLRNEERGKGTAADTSVKPQXXXXXXXXXXXXXXXXXXXXXXXPATVGNIIPRIVGPLEA
Sbjct: 61  RLRNEERGKGTAADTSVKPQXXXXXXXXXXXXXXXXXXXXXXXPATVGNIIPRIVGPLEA 120

Query: 121 DVIGIRGMQLVHREELPDVGYLHPGFIRELEWSDGILREMGGRLSILPDADLKEHAERLW 180
           DVIGIRGMQLVHREELPDVGYLHPGFIRELEWSDGILREMGGRLSILPDADLKEHAERLW
Sbjct: 121 DVIGIRGMQLVHREELPDVGYLHPGFIRELEWSDGILREMGGRLSILPDADLKEHAERLW 180

Query: 181 RGLTVQCTNRVTGIAMLYISLEPPFTIKSAGNRSWEKAYAGDLKENYLKIYKEQFPIDAP 240
           RGLTVQCTNRVTGIAMLYISLEPPFTIKSAGNRSWEKAYAGDLKENYLKIYKEQFPIDAP
Sbjct: 181 RGLTVQCTNRVTGIAMLYISLEPPFTIKSAGNRSWEKAYAGDLKENYLKIYKEQFPIDAP 240

Query: 241 VLSKACIDGFVWAFQNVSILKGTLGRVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSK 300
           VLSKACIDGFVWAFQNVSILKGTLGRVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSK
Sbjct: 241 VLSKACIDGFVWAFQNVSILKGTLGRVASSLNLSPKDLTKACWHKLTKMPLNSLVTILSK 300

Query: 301 VTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPE 360
           VTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPE
Sbjct: 301 VTAESNIAGAPNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMICERIGDMGNQDPPE 360

Query: 361 TRAIYRRWANRICDFYMPTLFFSFKFAYD 390
           TRAIYRRWANRICDFYMPTLFFSFKFAYD
Sbjct: 361 TRAIYRRWANRICDFYMPTLFFSFKFAYD 389

[Close]

BLAST of CsaV3_2G036600 vs. TrEMBL
Match: tr|A0A024HA00|A0A024HA00_9RHAB (Coat protein OS=uncultured varicosavirus OX=1342375 GN=CP PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-09
Identity = 60/215 (27.91%), Postives = 91/215 (42.33%), Query Frame = 0


Query: 208 KSAGN--RSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDG---------------- 267
           KSA N  R++E+     +K  Y + YK++FP+      + CI+G                
Sbjct: 273 KSAENYVRAFEQ-----IKAKYYRFYKDEFPLTYLTPDRRCIEGLKEIYTNKEVYRNALL 332

Query: 268 -FVWAFQNVSILKG-----------TLGRVASSL--------NLSPKDLTKACWHKLTKM 327
            F+++F  ++  KG             G  A SL        +  P++L+   WH+ T+ 
Sbjct: 333 PFLYSFSELTDPKGMCRLLYEQHLALTGMHAVSLFVKVCLGSHCLPEELSSGLWHRTTRD 392

Query: 328 PLNSLVTILSKVTAESNIAGA--PNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMIC 373
            L  +  IL      S+  G      +GTW YAR+    YF  IQ+K C  L C LA + 
Sbjct: 393 ALREIKDIL-----VSHFLGGIDGQEKGTWMYARLLNDAYFSRIQTKNCKNLVCALAYMA 452

[Close]

BLAST of CsaV3_2G036600 vs. TrEMBL
Match: tr|A0A0D6DU22|A0A0D6DU22_9VIRU (Polyprotein OS=Black grass varicosavirus-like virus OX=1587515 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.1e-09
Identity = 60/215 (27.91%), Postives = 91/215 (42.33%), Query Frame = 0


Query: 208 KSAGN--RSWEKAYAGDLKENYLKIYKEQFPIDAPVLSKACIDG---------------- 267
           KSA N  R++E+     +K  Y + YK++FP+      + CI+G                
Sbjct: 273 KSAENYVRAFEQ-----IKAKYYRFYKDEFPLTYLTPDRRCIEGLKEIYTNKEVYRNALL 332

Query: 268 -FVWAFQNVSILKG-----------TLGRVASSL--------NLSPKDLTKACWHKLTKM 327
            F+++F  ++  KG             G  A SL        +  P++L+   WH+ T+ 
Sbjct: 333 PFLYSFSELTDPKGMCRLLYEQHLALTGMHAVSLFVKVCLGSHCLPEELSSGLWHRTTRD 392

Query: 328 PLNSLVTILSKVTAESNIAGA--PNVRGTWKYARVFGSEYFIGIQSKRCPILFCLLAMIC 373
            L  +  IL      S+  G      +GTW YAR+    YF  IQ+K C  L C LA + 
Sbjct: 393 ALREIKDIL-----VSHFLGGIDGQEKGTWMYARLLNDAYFSRIQTKNCKNLVCALAYMA 452

The following BLAST results are available for this feature:

BLAST of CsaV3_2G036600 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN63419.1	5.2e-208	100.00	hypothetical protein Csa_2G441740 [Cucumis sativus]	[more]
YP_009130617.1	1.7e-09	27.91	polyprotein [Black grass varicosavirus-like virus] >CDF65984.1 coat protein [unc...	[more]
XP_015895577.1	1.5e-05	37.93	uncharacterized protein LOC107429412 [Ziziphus jujuba]	[more]
XP_008358190.1	5.7e-05	35.29	PREDICTED: uncharacterized protein LOC103421926 isoform X1 [Malus domestica]	[more]
XP_008358191.1	5.7e-05	35.29	PREDICTED: uncharacterized protein LOC103421926 isoform X2 [Malus domestica]	[more]

BLAST of CsaV3_2G036600 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G036600 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G036600 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LR10\|A0A0A0LR10_CUCSA	3.4e-208	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G441740 PE=4 SV=1	[more]
tr\|A0A024HA00\|A0A024HA00_9RHAB	1.1e-09	27.91	Coat protein OS=uncultured varicosavirus OX=1342375 GN=CP PE=4 SV=1	[more]
tr\|A0A0D6DU22\|A0A0D6DU22_9VIRU	1.1e-09	27.91	Polyprotein OS=Black grass varicosavirus-like virus OX=1587515 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G036600.1	CsaV3_2G036600.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..88

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G036600	Cucsa.318570	Cucumber (Gy14) v1	cgycucB495
CsaV3_2G036600	CsGy2G027360	Cucumber (Gy14) v2	cgybcucB065

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G036600	Silver-seed gourd	carcucB1100
CsaV3_2G036600	Silver-seed gourd	carcucB0836
CsaV3_2G036600	Cucurbita maxima (Rimu)	cmacucB0653
CsaV3_2G036600	Cucurbita maxima (Rimu)	cmacucB0703
CsaV3_2G036600	Cucurbita moschata (Rifu)	cmocucB0639
CsaV3_2G036600	Cucurbita moschata (Rifu)	cmocucB0689
CsaV3_2G036600	Cucurbita pepo (Zucchini)	cpecucB0337
CsaV3_2G036600	Cucurbita pepo (Zucchini)	cpecucB0881
CsaV3_2G036600	Wild cucumber (PI 183967)	cpicucB081
CsaV3_2G036600	Bottle gourd (USVL1VR-Ls)	cuclsiB105
CsaV3_2G036600	Melon (DHL92) v3.5.1	cucmeB099
CsaV3_2G036600	Melon (DHL92) v3.6.1	cucmedB091
CsaV3_2G036600	Watermelon (Charleston Gray)	cucwcgB106
CsaV3_2G036600	Watermelon (97103) v1	cucwmB115
CsaV3_2G036600	Watermelon (97103) v2	cucwmbB168
CsaV3_2G036600	Wax gourd	cucwgoB186