CsaV3_2G035930 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G035930
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPlant self-incompatibility S1
Locationchr2 : 24132115 .. 24135057 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGTGAAAGAAATAGTTACAGGTAATGCTTTTCGGTTTTGTAACTTTGTCATGCTCTAGTGTTATCGATGGAAATAGCTGAAGATGTGAACAAAACAGTCAAATGTAAATATTTTAGAGGAAGGGTCTAGTCCTTGTTTTGTGGTTATTCTTTCCTCCCCTTGTTTAAAGTTTGAAATGGGATTGTGTTTGCATAGAGGATTTCTTTCACTAGATTATGATATTTAAAATTCATCTCTGTATCCTATTTTAATTAGATTTAACACTCATTCCATCCCGTGGTTGTTGATGCGGATGAGATATCCAACAATGAATCCTTAGTATAGAATGAGCAGCATAGTAACATCAATCCTTCGTATAAAATTAGCGATCTTCTATAATAAAACAATTATTATAGTACTTAAATGATAGACCATTATTATTGTACTTAAATGTGGTCTATCACTAATAGTACTTATATGTAGATTCCATTTATTGACACCATCTTATTATTTTTCTTTCTTTCATTCTTTTATGCTTGCTACAAAGTAAAATGTTCTGTGAATGTCTGCTATATTTATGTTGTACTATCTTTAGGTGAGTTGTACTCTTTTGCCCTGTGATGTATGCTCATATTCATGTTGTCTTTATAGGTTCAACTGGAGCCGACAACTGCATGAGTCTTCCTTCAAAGAAGCTAATTTGGACCATCAAAATACACTAGCTAGCATGGTTCAAGCAACAAAGAATATTTTCATATATGAAGGCTTACTGGTTGATTGTTTATGCTTGTGCAGAAAATCATGTTATATGTATTCTGATGGTATTTGCACTGGTTTTGATTAAGAGTTGGAATTTCATACTTGTAAATTTAAATCTTGATTGGAAATGTACGAATATTACAAAGTGTATTATAGCGTATATATATTAAAGTGTTGACTATTTGTTTCTATGTGGGTGTGATGTATTATAACATGATTGTCATTTAAATTATTCGTGTAATGGCAGAGTGACAAAAAGAACAGAGAAAAACGATAGTAATTGAGGAATTTGCAACAGGAAATAAATGTCATAATATATGAATTCGTGACATTCCTTAATTGTCATCAATATTACAATAATGACAATTTATGATAAAAAGAACTGTCACGATTGACCTAACTTTGACAGGAAAAAAATATCGTCAATAGCGAAACAATGACATTTAATTTTATATAATAACTGTCACGATTGACATATATTTGACAGGAAAAATTGTCATAAATTACGAATTCGTGACATTTCTAAATTGTCGTCAATTTCGAAAATATGACATTTATTTTTATAAAAACTGTCACAATTGACATATCCTTGACATTTAGAAAATGTCATAAAAACGAATTTGCGACATTTTTTTAACTGTCGTTAATATGCAAATGATGACAGTTTTTTGTTGTCATAATATAAAATATGACAATTATTTATTGTCATAAAATAGTAATTAATGACATTTACTATCTGTCATGTAAGGACTTTCTACAACAGACACTATGACGGTAAATAATTGTTACAGATTTTATTCGCGACAAAAAATAATTGTATTTGTAGATCATTTTTGTTGTATTATACTATAAATAAATGTTGATAACAAAATTAAAAGAAAGATTATTGTAGATGAAAAAACGACTAAAAATATATATATAAATAGTAAACTTTTCAATATCTTTCCATGATAGATATATAGACATCATAGATACTTCTATTATAGTCTATGACGTTATTGATATTGTTAATTTGTGAAAACATGTACTAAGTGTATTTTATATATATTGGATTAAGGACATAGGTTTTTTCTTCCAAAAAAATTATGTACTAAAAATTTTATATTGCATCAAATGACAAAAGAATTTAGAAAAAAACAACCCATAATATATCTTTTATGTATATTGTAAATATGACAAGTAATTAGATATATTATAAAACTATCATAAGGCTATCAACTCACTTTTGCAATTTAGAAAACACAATCTCATGGCCTCTATTATCATAAATTTTCTTTTACTATTTTTACAAACGTCCCTTAAAAATGTATTATCTTCATGTATTTAGCTTAATTATATATTTCACCAACCACATCCTTCTCTAGTATTACTACGAAATAATTCATTCCATTTCTATATACCAGACAGAAAATGCAATGGCATAGTTTGCATTTTCTATCATTGCTTCATGAAAATCAAAATAACACAACTTTATTTACCAATTCTATTAAAAATAACAGTGATGGATATTATTGATTTTATTCACAAGGGATCCAAATTAAGAATAAAATATGAGAAATGAAATAGAAGCAATCTGAATCCAACCTCAAAAACATTAAAAAAAATTAGATCATTTTGCATTGATATCATATCTTACCTTAAATATATAATTATCCTCCTAATTAAACATCATCACAAGAGCTTCTGGCCCATATAAAATGAACCAACAAAACCAAAATAGTTGAAATCATTAACAAAAGAAGTCCAAAAAATGATGGAAAAACTTTTATCAAACTTGTGTTTGATAGTATTATTGTTTGGTTTGGGATCAAACATTTTTATCAACACAGGTTTTGCAGGTTCCAAGAAACAAGGGGTGGGTTCGGACTGGGTAGTGTCAATTCACAATTTTCAAAAAGACGCCACTCTATTGACTCATTGCAAATCGAAAGACGATGATTTGGGTGCAAAAGTTCTCGACGTTAAAGGTCAATACAGTTGGAGTTTCAAAGAAAACATTTGGCAAACAACATTGTTTTGGTGCGATTTTAGTAGTTTGAATGGACATGCTTCATTTGAGGTTTTTTGGCCAGAGAAGGGGGAATGGCTTGAATATAGATGTGACTATGGAAATTGCACCTGGGCAGCTACTAATGACGGGTTTTTCTTGGCAAATATTCCTGAAAGGAAGTTTGAATTTATGCACTATTGGGAACATTAA

mRNA sequence

ATGCTTGTGAAAGAAATAGTTACAGGTTTTGCAGGTTCCAAGAAACAAGGGGTGGGTTCGGACTGGGTAGTGTCAATTCACAATTTTCAAAAAGACGCCACTCTATTGACTCATTGCAAATCGAAAGACGATGATTTGGGTGCAAAAGTTCTCGACGTTAAAGGTCAATACAGTTGGAGTTTCAAAGAAAACATTTGGCAAACAACATTGTTTTGGTGCGATTTTAGTAGTTTGAATGGACATGCTTCATTTGAGGTTTTTTGGCCAGAGAAGGGGGAATGGCTTGAATATAGATGTGACTATGGAAATTGCACCTGGGCAGCTACTAATGACGGGTTTTTCTTGGCAAATATTCCTGAAAGGAAGTTTGAATTTATGCACTATTGGGAACATTAA

Coding sequence (CDS)

ATGCTTGTGAAAGAAATAGTTACAGGTTTTGCAGGTTCCAAGAAACAAGGGGTGGGTTCGGACTGGGTAGTGTCAATTCACAATTTTCAAAAAGACGCCACTCTATTGACTCATTGCAAATCGAAAGACGATGATTTGGGTGCAAAAGTTCTCGACGTTAAAGGTCAATACAGTTGGAGTTTCAAAGAAAACATTTGGCAAACAACATTGTTTTGGTGCGATTTTAGTAGTTTGAATGGACATGCTTCATTTGAGGTTTTTTGGCCAGAGAAGGGGGAATGGCTTGAATATAGATGTGACTATGGAAATTGCACCTGGGCAGCTACTAATGACGGGTTTTTCTTGGCAAATATTCCTGAAAGGAAGTTTGAATTTATGCACTATTGGGAACATTAA

Protein sequence

MLVKEIVTGFAGSKKQGVGSDWVVSIHNFQKDATLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQTTLFWCDFSSLNGHASFEVFWPEKGEWLEYRCDYGNCTWAATNDGFFLANIPERKFEFMHYWEH
Homology
[Close]
BLAST of CsaV3_2G035930 vs. NCBI nr
Match: XP_022137291.1 (S-protein homolog 1-like [Momordica charantia])

HSP 1 Score: 167.5 bits (423), Expect = 3.0e-38
Identity = 70/121 (57.85%), Postives = 87/121 (71.90%), Query Frame = 0 

Query: 12  GSKKQGVGSDWVVSIHNFQK-DATLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQTTL 71
           GS +Q  GS W V+I N+ K  A L  HCKSKDDDLG  V++ +G+Y W FKEN WQTTL
Sbjct: 15  GSYRQWPGSHWQVTIRNYLKGSANLTVHCKSKDDDLGEHVIEFRGRYEWKFKENFWQTTL 74

Query: 72  FWCDFSSLNGHASFEVFWPEKGEWLEYRCDYGNCTWAATND-GFFLANIPERKFEFMHYW 131
           FWC+F S+ GHAS EVFWPEK +WL YRCD+ NC W A  D G +LA++P+R FE  + W
Sbjct: 75  FWCNFKSMYGHASGEVFWPEKSDWLAYRCDFSNCIWVARGDQGIYLAHVPQRTFELKYRW 134

[Close]
BLAST of CsaV3_2G035930 vs. NCBI nr
Match: XP_008458671.1 (PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo])

HSP 1 Score: 153.3 bits (386), Expect = 5.8e-34
Identity = 70/120 (58.33%), Postives = 81/120 (67.50%), Query Frame = 0 

Query: 13  SKKQGVGSDWVVSIHNFQKDATLLTHCKSKDDDLGAKVLDVKGQ-YSWSFKENIWQTTLF 72
           SK Q   +DW V+I N+Q +A+L  HCKSKDDDLG  V+  +G+ YSW FKEN  QTT F
Sbjct: 29  SKYQLPLTDWQVTIINYQINASLEVHCKSKDDDLGVHVIQNEGERYSWGFKENWLQTTKF 88

Query: 73  WCDFSSLNGHASFEVFWPEKGEWLEYRCDYGNCTWAATNDGFFLANIPERKFEFMHYWEH 132
           WC+F S  GHASFEVFWPE G WL  RC   NC W A+NDGF L N P +  EF H W H
Sbjct: 89  WCNFQSRLGHASFEVFWPETGTWLSDRCSNSNCVWVASNDGFSLLNGPAKTLEFQHPWLH 148

[Close]
BLAST of CsaV3_2G035930 vs. NCBI nr
Match: XP_011656368.1 (PREDICTED: uncharacterized protein LOC105435729 [Cucumis sativus] >KGN45709.1 hypothetical protein Csa_6G007430 [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 1.1e-32
Identity = 68/121 (56.20%), Postives = 80/121 (66.12%), Query Frame = 0 

Query: 13  SKKQGVGSDWVVSIHNFQKDATLLTHCKSKDDDLGAKVLDVKGQ-YSWSFKENIWQTTLF 72
           SK Q   +DW V+I N+Q +A+L  HCKSKDDDLG  V+  +G+ YSW FKEN  QTT +
Sbjct: 29  SKYQLPLTDWTVTIINYQINASLQVHCKSKDDDLGVHVIQNEGEHYSWGFKENWLQTTKY 88

Query: 73  WCDFSSLNGHASFEVFWPEKGEWLEYRC-DYGNCTWAATNDGFFLANIPERKFEFMHYWE 132
           WCDF S  GHASFEVFWPE+G W   RC    NC W A +DGF L N P +  EF H W 
Sbjct: 89  WCDFQSKLGHASFEVFWPERGTWFSDRCGSNSNCVWVAAHDGFSLLNAPAKTLEFQHPWL 148

[Close]
BLAST of CsaV3_2G035930 vs. NCBI nr
Match: XP_004136434.2 (PREDICTED: uncharacterized protein LOC101208376 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 4.1e-32
Identity = 61/111 (54.95%), Postives = 73/111 (65.77%), Query Frame = 0 

Query: 20  SDWVVSIHNFQKDATLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQTTLFWCDFSSLN 79
           S W ++I N     TL   CKSKDDDLGA+ L VK Q+SWSFKEN+WQTTL+WC   +  
Sbjct: 31  SSWKINILNEMTKDTLFLQCKSKDDDLGAQNLGVKQQFSWSFKENLWQTTLYWCYMHNAE 90

Query: 80  GHASFEVFWPEKGEWLEYRCDYGNCTWAATNDGFFLANIPERKFEFMHYWE 131
            HASF VFWPEK  WL +RC   NC W+A +DG +L   P   FE +H WE
Sbjct: 91  SHASFNVFWPEKSGWLAFRCQLRNCIWSARDDGIYLKTNPHNTFELIHTWE 141

[Close]
BLAST of CsaV3_2G035930 vs. NCBI nr
Match: XP_004136435.1 (PREDICTED: uncharacterized protein LOC101208617 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 8.6e-30
Identity = 57/111 (51.35%), Postives = 72/111 (64.86%), Query Frame = 0 

Query: 20  SDWVVSIHNFQKDATLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQTTLFWCDFSSLN 79
           S W V+I N     +L   CKSKDDDLGA+ L VK Q+SWSFKEN+WQTTL+WC   +  
Sbjct: 31  SSWKVNILNEMTKDSLFIRCKSKDDDLGAQNLGVKQQFSWSFKENLWQTTLYWCYMHNAK 90

Query: 80  GHASFEVFWPEKGEWLEYRCDYGNCTWAATNDGFFLANIPERKFEFMHYWE 131
            HASF V+WPE+  WL +RC   NC W+A +DG +L       +E +H WE
Sbjct: 91  SHASFNVYWPERSGWLAFRCQLRNCIWSARDDGIYLKTNTHNTYELIHTWE 141

[Close]
BLAST of CsaV3_2G035930 vs. TAIR10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 95.1 bits (235), Expect = 3.4e-20
Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = 0 

Query: 20  SDWVVSIHN-FQKDATLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQTTLFWCDFSSL 79
           S+W V++ N      TL  HCKSK++DLG   L    ++SW+F EN+  +TLFWC  S  
Sbjct: 39  SEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSKD 98

Query: 80  NGHASFEVFWPEKGEWLEYRCDYGNCTWAATNDGFFLAN 118
           +GH + +VFW +    L +RCD+ NC W A NDG +L N
Sbjct: 99  DGHMNVKVFWDD--VILFHRCDWKNCVWTAKNDGLYLWN 135

[Close]
BLAST of CsaV3_2G035930 vs. TAIR10
Match: AT4G16295.1 (S-protein homologue 1)

HSP 1 Score: 94.7 bits (234), Expect = 4.4e-20
Identity = 44/112 (39.29%), Postives = 61/112 (54.46%), Query Frame = 0 

Query: 20  SDWVVSIHN-FQKDATLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQTTLFWCDFSSL 79
           S+W V++ N      TL  HCKSK+DDLG   L  + ++SW+F EN+  +T FWC  +  
Sbjct: 39  SEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKD 98

Query: 80  NGHASFEVFWPEKGEWLEYRCDYGNCTWAATNDGFFLANIPERKFEFMHYWE 131
           NGH +  VFW +    L +RC + NC W A  DG +L N    +      WE
Sbjct: 99  NGHMNVNVFWDD--VILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

[Close]
BLAST of CsaV3_2G035930 vs. TAIR10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 70.9 bits (172), Expect = 6.8e-13
Identity = 32/96 (33.33%), Postives = 50/96 (52.08%), Query Frame = 0 

Query: 34  TLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQTTLFWCDFSSLNGHASFEVFWPEKGE 93
           TLL HCKSKDDDLG + L     +S+SF    +  TL++C FS  N   SF+++   +  
Sbjct: 61  TLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDS 120

Query: 94  WLEYRCDYGNCTWAATNDGFFLANIPERKFEFMHYW 130
             + +C+   C W    +G    N   ++F+  + W
Sbjct: 121 GGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]
BLAST of CsaV3_2G035930 vs. TAIR10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 68.6 bits (166), Expect = 3.4e-12
Identity = 36/104 (34.62%), Postives = 56/104 (53.85%), Query Frame = 0 

Query: 12  GSKKQGVGSDW---VVSIHNFQKDATLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQT 71
           GS   G+   W   VV++ N      L  HCKSK DDLG  V+  K +Y + F+ N+W++
Sbjct: 16  GSGYGGLPPFWRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKS 75

Query: 72  TLFWCDFSSLNGHASFEVFWPEKGEWLEYRCDYGNCTWAATNDG 113
           TLF+C F   +   SF+++  ++ + +   CD  +C W    DG
Sbjct: 76  TLFFCSFQWDSQFKSFDIYDAQRDQGI---CD--DCQWEIKPDG 114

[Close]
BLAST of CsaV3_2G035930 vs. TAIR10
Match: AT5G06030.1 (Plant self-incompatibility protein S1 family)

HSP 1 Score: 67.8 bits (164), Expect = 5.8e-12
Identity = 38/106 (35.85%), Postives = 54/106 (50.94%), Query Frame = 0 

Query: 24  VSIHNFQKDATLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQTTLFWCDFSSLNGHAS 83
           V+I N+  D  L  HCKS+DDDLG  +L     + W F  N   +TL +C FS    +  
Sbjct: 48  VTIQNY-NDYLLAIHCKSRDDDLGFHILAKGELFGWKFHVNFRYSTLCFCGFSQRQINKG 107

Query: 84  FEVFWPEKGEWLEYRCDYGNCTWAATNDGFF-LANIPERKFEFMHY 129
             + +    ++  YRC   NCTW A  DGF    +IP R + F ++
Sbjct: 108 VFIIYVASRDF--YRC--ANCTWKAEKDGFHGYGDIPTRGYLFYNW 148

[Close]
BLAST of CsaV3_2G035930 vs. Swiss-Prot
Match: sp|Q2HQ46|SPH74_ARATH (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 6.1e-19
Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = 0 

Query: 20  SDWVVSIHN-FQKDATLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQTTLFWCDFSSL 79
           S+W V++ N      TL  HCKSK++DLG   L    ++SW+F EN+  +TLFWC  S  
Sbjct: 39  SEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSKD 98

Query: 80  NGHASFEVFWPEKGEWLEYRCDYGNCTWAATNDGFFLAN 118
           +GH + +VFW +    L +RCD+ NC W A NDG +L N
Sbjct: 99  DGHMNVKVFWDD--VILFHRCDWKNCVWTAKNDGLYLWN 135

[Close]
BLAST of CsaV3_2G035930 vs. Swiss-Prot
Match: sp|F4JLS0|SPH1_ARATH (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.0e-19
Identity = 44/112 (39.29%), Postives = 61/112 (54.46%), Query Frame = 0 

Query: 20  SDWVVSIHN-FQKDATLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQTTLFWCDFSSL 79
           S+W V++ N      TL  HCKSK+DDLG   L  + ++SW+F EN+  +T FWC  +  
Sbjct: 39  SEWQVTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKD 98

Query: 80  NGHASFEVFWPEKGEWLEYRCDYGNCTWAATNDGFFLANIPERKFEFMHYWE 131
           NGH +  VFW +    L +RC + NC W A  DG +L N    +      WE
Sbjct: 99  NGHMNVNVFWDD--VILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKWE 148

[Close]
BLAST of CsaV3_2G035930 vs. Swiss-Prot
Match: sp|F4JLQ5|SPH2_ARATH (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-11
Identity = 32/96 (33.33%), Postives = 50/96 (52.08%), Query Frame = 0 

Query: 34  TLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQTTLFWCDFSSLNGHASFEVFWPEKGE 93
           TLL HCKSKDDDLG + L     +S+SF    +  TL++C FS  N   SF+++   +  
Sbjct: 61  TLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDS 120

Query: 94  WLEYRCDYGNCTWAATNDGFFLANIPERKFEFMHYW 130
             + +C+   C W    +G    N   ++F+  + W
Sbjct: 121 GGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]
BLAST of CsaV3_2G035930 vs. Swiss-Prot
Match: sp|O23020|SPH5_ARATH (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 6.1e-11
Identity = 36/104 (34.62%), Postives = 56/104 (53.85%), Query Frame = 0 

Query: 12  GSKKQGVGSDW---VVSIHNFQKDATLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQT 71
           GS   G+   W   VV++ N      L  HCKSK DDLG  V+  K +Y + F+ N+W++
Sbjct: 16  GSGYGGLPPFWRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKS 75

Query: 72  TLFWCDFSSLNGHASFEVFWPEKGEWLEYRCDYGNCTWAATNDG 113
           TLF+C F   +   SF+++  ++ + +   CD  +C W    DG
Sbjct: 76  TLFFCSFQWDSQFKSFDIYDAQRDQGI---CD--DCQWEIKPDG 114

[Close]
BLAST of CsaV3_2G035930 vs. Swiss-Prot
Match: sp|Q9FI83|SPH28_ARATH (S-protein homolog 28 OS=Arabidopsis thaliana OX=3702 GN=SPH28 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-10
Identity = 38/106 (35.85%), Postives = 54/106 (50.94%), Query Frame = 0 

Query: 24  VSIHNFQKDATLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQTTLFWCDFSSLNGHAS 83
           V+I N+  D  L  HCKS+DDDLG  +L     + W F  N   +TL +C FS    +  
Sbjct: 48  VTIQNY-NDYLLAIHCKSRDDDLGFHILAKGELFGWKFHVNFRYSTLCFCGFSQRQINKG 107

Query: 84  FEVFWPEKGEWLEYRCDYGNCTWAATNDGFF-LANIPERKFEFMHY 129
             + +    ++  YRC   NCTW A  DGF    +IP R + F ++
Sbjct: 108 VFIIYVASRDF--YRC--ANCTWKAEKDGFHGYGDIPTRGYLFYNW 148

[Close]
BLAST of CsaV3_2G035930 vs. TrEMBL
Match: tr|A0A1S3C8Z6|A0A1S3C8Z6_CUCME (uncharacterized protein LOC103498000 OS=Cucumis melo OX=3656 GN=LOC103498000 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 3.8e-34
Identity = 70/120 (58.33%), Postives = 81/120 (67.50%), Query Frame = 0 

Query: 13  SKKQGVGSDWVVSIHNFQKDATLLTHCKSKDDDLGAKVLDVKGQ-YSWSFKENIWQTTLF 72
           SK Q   +DW V+I N+Q +A+L  HCKSKDDDLG  V+  +G+ YSW FKEN  QTT F
Sbjct: 29  SKYQLPLTDWQVTIINYQINASLEVHCKSKDDDLGVHVIQNEGERYSWGFKENWLQTTKF 88

Query: 73  WCDFSSLNGHASFEVFWPEKGEWLEYRCDYGNCTWAATNDGFFLANIPERKFEFMHYWEH 132
           WC+F S  GHASFEVFWPE G WL  RC   NC W A+NDGF L N P +  EF H W H
Sbjct: 89  WCNFQSRLGHASFEVFWPETGTWLSDRCSNSNCVWVASNDGFSLLNGPAKTLEFQHPWLH 148

[Close]
BLAST of CsaV3_2G035930 vs. TrEMBL
Match: tr|A0A0A0KA40|A0A0A0KA40_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G007430 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 7.2e-33
Identity = 68/121 (56.20%), Postives = 80/121 (66.12%), Query Frame = 0 

Query: 13  SKKQGVGSDWVVSIHNFQKDATLLTHCKSKDDDLGAKVLDVKGQ-YSWSFKENIWQTTLF 72
           SK Q   +DW V+I N+Q +A+L  HCKSKDDDLG  V+  +G+ YSW FKEN  QTT +
Sbjct: 29  SKYQLPLTDWTVTIINYQINASLQVHCKSKDDDLGVHVIQNEGEHYSWGFKENWLQTTKY 88

Query: 73  WCDFSSLNGHASFEVFWPEKGEWLEYRC-DYGNCTWAATNDGFFLANIPERKFEFMHYWE 132
           WCDF S  GHASFEVFWPE+G W   RC    NC W A +DGF L N P +  EF H W 
Sbjct: 89  WCDFQSKLGHASFEVFWPERGTWFSDRCGSNSNCVWVAAHDGFSLLNAPAKTLEFQHPWL 148

[Close]
BLAST of CsaV3_2G035930 vs. TrEMBL
Match: tr|A0A1S3C8C8|A0A1S3C8C8_CUCME (uncharacterized protein LOC103497646 OS=Cucumis melo OX=3656 GN=LOC103497646 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-25
Identity = 56/111 (50.45%), Postives = 68/111 (61.26%), Query Frame = 0 

Query: 22  WVVSIHNFQKDATLLTHCKSKDDDLGAKVLDVKG-QYSWSFKENIWQTTLFWCDFSSLNG 81
           + + + N   +A L+ HC+SKDDDLG   L  +G  Y W+FKEN WQTTLFWC     N 
Sbjct: 22  YYIHVMNGLSNADLIVHCQSKDDDLGYHHLANRGDDYQWNFKENFWQTTLFWCKLEKQNV 81

Query: 82  HASFEVFWPE-KGEWLEYRCDY-GNCTWAATNDGFFLANIPERKFEFMHYW 130
           H SFE FWPE K  WL  RC Y G C W A +DG +L N+P    EF+H W
Sbjct: 82  HVSFESFWPESKSTWLRDRCGYQGTCIWTAKDDGIYLRNMPANIDEFVHKW 132

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BLAST of CsaV3_2G035930 vs. TrEMBL
Match: tr|A0A251N105|A0A251N105_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G208400 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-24
Identity = 52/113 (46.02%), Postives = 70/113 (61.95%), Query Frame = 0 

Query: 22  WVVSIHN-FQKDATLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQTTLFWCDFSSLNG 81
           WVV + N      TL+ HCKSKDDDLG + +    +++W FKEN   TTLFWC+  + + 
Sbjct: 47  WVVHVVNQMGASKTLVAHCKSKDDDLGIRDVLPGNEFNWGFKENFGGTTLFWCNIHNNHQ 106

Query: 82  HASFEVFWPE---KGEWLEYRCDYGNCTWAATNDGFFLANIPERKFEFMHYWE 131
           HA+F+VFW E   K  WL YRC++  C W A +DG ++ N PE + E  H WE
Sbjct: 107 HANFQVFWHEDESKSSWLHYRCNWKECFWVAKDDGIYIRNTPEGRDELQHQWE 159

[Close]
BLAST of CsaV3_2G035930 vs. TrEMBL
Match: tr|A0A251N118|A0A251N118_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G208300 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.1e-24
Identity = 50/106 (47.17%), Postives = 69/106 (65.09%), Query Frame = 0 

Query: 26  IHNFQKDATLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQTTLFWCDFSSLNGHASFE 85
           ++N     TL  HCKSKDDDLG + L    +++WSFKEN + TTL+WC  S+   HA+ +
Sbjct: 39  VNNLGAGKTLFAHCKSKDDDLGERNLAPGTEFNWSFKENFFGTTLYWCYMSTDQKHAALD 98

Query: 86  VFWPE-KGEWLEYRCDYGNCTWAATNDGFFLANIPERKFEFMHYWE 131
           VFW E    WL+YRC++ +C W A +DG ++  IPE + EF H WE
Sbjct: 99  VFWVEGDHSWLQYRCNWKDCIWIAKDDGIYIKIIPENRDEFSHKWE 144

The following BLAST results are available for this feature:
BLAST of CsaV3_2G035930 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022137291.13.0e-3857.85S-protein homolog 1-like [Momordica charantia][more]
XP_008458671.15.8e-3458.33PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo][more]
XP_011656368.11.1e-3256.20PREDICTED: uncharacterized protein LOC105435729 [Cucumis sativus] >KGN45709.1 hy... [more]
XP_004136434.24.1e-3254.95PREDICTED: uncharacterized protein LOC101208376 [Cucumis sativus][more]
XP_004136435.18.6e-3051.35PREDICTED: uncharacterized protein LOC101208617 [Cucumis sativus][more]
BLAST of CsaV3_2G035930 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G29035.13.4e-2044.44Plant self-incompatibility protein S1 family[more]
AT4G16295.14.4e-2039.29S-protein homologue 1[more]
AT4G16195.16.8e-1333.33Plant self-incompatibility protein S1 family[more]
AT1G04645.13.4e-1234.62Plant self-incompatibility protein S1 family[more]
AT5G06030.15.8e-1235.85Plant self-incompatibility protein S1 family[more]
BLAST of CsaV3_2G035930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q2HQ46|SPH74_ARATH6.1e-1944.44S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1[more]
sp|F4JLS0|SPH1_ARATH8.0e-1939.29S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1[more]
sp|F4JLQ5|SPH2_ARATH1.2e-1133.33S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1[more]
sp|O23020|SPH5_ARATH6.1e-1134.62S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1[more]
sp|Q9FI83|SPH28_ARATH1.0e-1035.85S-protein homolog 28 OS=Arabidopsis thaliana OX=3702 GN=SPH28 PE=3 SV=1[more]
BLAST of CsaV3_2G035930 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C8Z6|A0A1S3C8Z6_CUCME3.8e-3458.33uncharacterized protein LOC103498000 OS=Cucumis melo OX=3656 GN=LOC103498000 PE=... [more]
tr|A0A0A0KA40|A0A0A0KA40_CUCSA7.2e-3356.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G007430 PE=4 SV=1[more]
tr|A0A1S3C8C8|A0A1S3C8C8_CUCME1.9e-2550.45uncharacterized protein LOC103497646 OS=Cucumis melo OX=3656 GN=LOC103497646 PE=... [more]
tr|A0A251N105|A0A251N105_PRUPE1.2e-2446.02Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G208400 PE=4 SV=1[more]
tr|A0A251N118|A0A251N118_PRUPE6.1e-2447.17Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G208300 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G035930.1CsaV3_2G035930.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF05938Self-incomp_S1coord: 24..129
e-value: 2.2E-23
score: 82.6
NoneNo IPR availablePANTHERPTHR31232:SF7S PROTEIN HOMOLOGUE 74-RELATEDcoord: 20..130
IPR010264Plant self-incompatibility S1PANTHERPTHR31232FAMILY NOT NAMEDcoord: 20..130

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_2G035930Cucsa.017360Cucumber (Gy14) v1cgycucB401
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G035930Silver-seed gourdcarcucB1100
CsaV3_2G035930Silver-seed gourdcarcucB0997
CsaV3_2G035930Cucumber (Gy14) v2cgybcucB065
CsaV3_2G035930Cucurbita maxima (Rimu)cmacucB0653
CsaV3_2G035930Cucurbita maxima (Rimu)cmacucB0703
CsaV3_2G035930Cucurbita moschata (Rifu)cmocucB0639
CsaV3_2G035930Cucurbita moschata (Rifu)cmocucB0689
CsaV3_2G035930Cucurbita pepo (Zucchini)cpecucB0337
CsaV3_2G035930Cucurbita pepo (Zucchini)cpecucB0881
CsaV3_2G035930Wild cucumber (PI 183967)cpicucB081
CsaV3_2G035930Bottle gourd (USVL1VR-Ls)cuclsiB105
CsaV3_2G035930Melon (DHL92) v3.5.1cucmeB103
CsaV3_2G035930Melon (DHL92) v3.6.1cucmedB096
CsaV3_2G035930Watermelon (Charleston Gray)cucwcgB138
CsaV3_2G035930Watermelon (97103) v1cucwmB156
CsaV3_2G035930Watermelon (97103) v2cucwmbB125
CsaV3_2G035930Wax gourdcucwgoB180
CsaV3_2G035930Wax gourdcucwgoB192