CsaV3_2G034420 (gene) Cucumber (Chinese Long) v3

NameCsaV3_2G034420
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2 : 22807943 .. 22808199 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCATCGTTGGCCGACCACTAGGTGTCATTTCTGACAACTACGCTGACAAACTTTTGGCCATCAACTTCGACAACTACTCGTAAACCTTGAAAAATGAATTTTTAAAATATTCTTTTCCTACTCCATCCAAATACATCTTTGATTTAATAACAATAATATTTTTCTTAGGATGGTTCTAACCCTAGATCTCTCCGAAACCTCGAGCCAATATCCCTATATCGCTCCTCCCTCTCTTGCTAGCCCCATGGGTTAG

mRNA sequence

ATGACCATCGTTGGCCGACCACTAGGTGTCATTTCTGACAACTACGCTGACAAACTTTTGGCCATCAACTTCGACAACTACTCGATGGTTCTAACCCTAGATCTCTCCGAAACCTCGAGCCAATATCCCTATATCGCTCCTCCCTCTCTTGCTAGCCCCATGGGTTAG

Coding sequence (CDS)

ATGACCATCGTTGGCCGACCACTAGGTGTCATTTCTGACAACTACGCTGACAAACTTTTGGCCATCAACTTCGACAACTACTCGATGGTTCTAACCCTAGATCTCTCCGAAACCTCGAGCCAATATCCCTATATCGCTCCTCCCTCTCTTGCTAGCCCCATGGGTTAG

Protein sequence

MTIVGRPLGVISDNYADKLLAINFDNYSMVLTLDLSETSSQYPYIAPPSLASPMG
BLAST of CsaV3_2G034420 vs. NCBI nr
Match: KGN63198.1 (hypothetical protein Csa_2G408930 [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 6.3e-22
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0

Query: 1  MTIVGRPLGVISDNYADKLLAINFDNYSMVLTLDLSETSSQYPYIAPPSLASPMG 56
          MTIVGRPLGVISDNYADKLLAINFDNYSMVLTLDLSETSSQYPYIAPPSLASPMG
Sbjct: 1  MTIVGRPLGVISDNYADKLLAINFDNYSMVLTLDLSETSSQYPYIAPPSLASPMG 55

BLAST of CsaV3_2G034420 vs. TrEMBL
Match: tr|A0A0A0LN10|A0A0A0LN10_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408930 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.1e-22
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0

Query: 1  MTIVGRPLGVISDNYADKLLAINFDNYSMVLTLDLSETSSQYPYIAPPSLASPMG 56
          MTIVGRPLGVISDNYADKLLAINFDNYSMVLTLDLSETSSQYPYIAPPSLASPMG
Sbjct: 1  MTIVGRPLGVISDNYADKLLAINFDNYSMVLTLDLSETSSQYPYIAPPSLASPMG 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN63198.16.3e-22100.00hypothetical protein Csa_2G408930 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LN10|A0A0A0LN10_CUCSA4.1e-22100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G408930 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G034420.1CsaV3_2G034420.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G034420Cucumber (Chinese Long) v3cuccucB087
CsaV3_2G034420Cucumber (Chinese Long) v3cuccucB099
CsaV3_2G034420Silver-seed gourdcarcucB0365
CsaV3_2G034420Silver-seed gourdcarcucB0844
CsaV3_2G034420Cucumber (Gy14) v2cgybcucB065
CsaV3_2G034420Cucumber (Gy14) v2cgybcucB259
CsaV3_2G034420Cucumber (Gy14) v2cgybcucB316
CsaV3_2G034420Cucumber (Gy14) v1cgycucB023
CsaV3_2G034420Cucumber (Gy14) v1cgycucB092
CsaV3_2G034420Cucurbita maxima (Rimu)cmacucB0606
CsaV3_2G034420Cucurbita maxima (Rimu)cmacucB0650
CsaV3_2G034420Cucurbita maxima (Rimu)cmacucB0702
CsaV3_2G034420Cucurbita maxima (Rimu)cmacucB0781
CsaV3_2G034420Cucurbita moschata (Rifu)cmocucB0114
CsaV3_2G034420Cucurbita moschata (Rifu)cmocucB0592
CsaV3_2G034420Cucurbita moschata (Rifu)cmocucB0640
CsaV3_2G034420Cucurbita moschata (Rifu)cmocucB0688
CsaV3_2G034420Cucurbita moschata (Rifu)cmocucB0764
CsaV3_2G034420Cucurbita pepo (Zucchini)cpecucB0066
CsaV3_2G034420Cucurbita pepo (Zucchini)cpecucB0290
CsaV3_2G034420Cucurbita pepo (Zucchini)cpecucB0336
CsaV3_2G034420Cucurbita pepo (Zucchini)cpecucB0828
CsaV3_2G034420Cucurbita pepo (Zucchini)cpecucB0880
CsaV3_2G034420Wild cucumber (PI 183967)cpicucB081
CsaV3_2G034420Wild cucumber (PI 183967)cpicucB324
CsaV3_2G034420Wild cucumber (PI 183967)cpicucB385
CsaV3_2G034420Bottle gourd (USVL1VR-Ls)cuclsiB105
CsaV3_2G034420Bottle gourd (USVL1VR-Ls)cuclsiB110
CsaV3_2G034420Bottle gourd (USVL1VR-Ls)cuclsiB122
CsaV3_2G034420Melon (DHL92) v3.5.1cucmeB103
CsaV3_2G034420Melon (DHL92) v3.5.1cucmeB107
CsaV3_2G034420Melon (DHL92) v3.6.1cucmedB096
CsaV3_2G034420Melon (DHL92) v3.6.1cucmedB100
CsaV3_2G034420Melon (DHL92) v3.6.1cucmedB152
CsaV3_2G034420Watermelon (Charleston Gray)cucwcgB126
CsaV3_2G034420Watermelon (Charleston Gray)cucwcgB141
CsaV3_2G034420Watermelon (97103) v1cucwmB146
CsaV3_2G034420Watermelon (97103) v1cucwmB158
CsaV3_2G034420Watermelon (97103) v1cucwmB165
CsaV3_2G034420Watermelon (97103) v2cucwmbB099
CsaV3_2G034420Watermelon (97103) v2cucwmbB122
CsaV3_2G034420Watermelon (97103) v2cucwmbB127
CsaV3_2G034420Wax gourdcucwgoB180
CsaV3_2G034420Wax gourdcucwgoB158