CsaV3_2G034190 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G034190
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	F-box domain containing protein
Location	chr2 : 22629782 .. 22632220 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGAATTTAGAAGCTTTATTTGTAATGTCAAAACTTGAGCACATGTAAAATAATTGAGTCTCATGTCCCAAGATGGGCAACAACACCTCCACAGCTTTTGTGTGAAATCACTTTCACAAATATCAGTCTAAAAATCACTTTCTATCTCTGTTTACTTGGTACCCACTTCCCCATAATAACTCCATTCCAATCACACTAATCAATTTTATATATTTTTTTAAAAATTGTTCCAATTTCCCAACAACCCATCTCCCATTTTCATGTCTCTCTTTCATTTCTTGTTTCTTTCCTTCATTCTCTCTCTCTCTCTCAATCTCTGTCTTATTTCTTTCTTCTTCCATTGCTTTAAAGCTAAGAGAAATGGGTACATGTGCTTCCCTTTACAACAGATCGGAATGCTCCGCCGTTAAGCCGCCGGCGCCACCCCAAACTACCACAGATCAGTTTGAGATTCCACCTTCACCTATTAAACACTTTAAGCTCCAAAACAATACCGATTCCGCCATTAAAGACATCTCTGTAATACCCAATCATCACAAGACTCCTTCTGGTTTGATTCTTCTTTCTTTATTCTTTTATGGGTTTTGTTTTGTTCTCTGTTTCGTTCTTCTCGCCATGGCATTCCTTGACTCCTCTGTTTTGTCCATTCTGTTATCTGAATGATGAATATCTGAAAATATCTGAAATTTTTTCTCAGGAAGTAAAGAAGAAGCTTTCTTTGATTCTCGAGCGTGGTTGGATTCTGATTGTGAAGATTTCTTCAGTGTCAAAGGAGGTGAGCACAAATATTATTCCAATCCCCTGTTTTTTTTTATATATTTAGGTATCTTAGCCTTCTTGCTTGACCATTATCACATTACTCTTCTGGCTTTAAAAAATTAATTAGTTAATTGATTTAGAGAAGATTGTTAATGATAAAATATTTTCTTATATATTTATTTGATATTTAAAATTTGTTTTTTTATGTTTATTAAATTTATTTCATTTAGGTTTTGAACTTTCATTATATATTAGTGCAAAACGTTTTGAAAAAATATTTTGAGGATTAGTGGTATTCAATTTCACTTATTAGGTAAGCTAAAACAATATAAAATGTAATTGCTCTACTTATTCCTAGATTTTAAATCTTGTTTCAATTGATAATTTTTTTTAATATATTTTGTAGAAAAATATAAACTTTCATAATGTTTATTTGTCTCTATTTTTCTAAAATATCTATTTTGATTTAGTAATTTGTAATACACCAATCTTCAAATGTATATGTATGGTAATCCCTACAATGATTGTAATTCTTTTTTATTTTAATTTAAAATTAAAGTTTACATTTTAATGGATAATGACTTGGAGTTTCAATTAGTCTCTTTTTAAAAATAAAAATGATTTTTTAATACATAATAAATCAAATTAATTTTTATTTTAATGCTTTCATATTATCTTGTCTTTTACAAAATATTCTCTCTAATTTAATTTAAAGAGAGGAAGTGTATTATTGTAACTAAATTATTGGATTAATATGTTAATATTCTATTATTATAGTATACATAATGCAATTGGTTTTAAGCACAAAATGATGCAGCATTATTTTTATTAAATTAAATCTTTTTTATTTTGGATTTTACTAATTAAATTACATTTTAATAGATAAATATATGTATTTATTTCATTTTTCTTATGATAAAAATGAATGTACTAATGTAAGCATCGAATTGAGTATTATCGACTATAGTAAGTGTAATAAATATTAAGTGGATGTTTTAATTACGTGAATCCTATCATAATATATATTAAAGGGACGTTTTAATTACCCGAATTTTACTATCATTCATGATCCGATCAACTTTCCAATCAACTTCTGTTTGGTTCAATTGGGTCAAGTTTTTTATCTGTCATGCTGTGAAATTTCTCTTTCTCTACAGATTTCACCCCTTCCTGCGGCAACACTCCGCTTCACCACCGATTTCCGGCGGAAACTCCCCGTACTAGCAGAGTCAGTGTCGCCAGCGCCGACAACGAAGCATCGAATTTCAACTTGCCGCCATTACCGACGAAGAGGAGAAAGAAACTGGCCGATCTGTTCCGAGAGAGCCTCGGGAATGAGGCGAGTTTTGCTTTCCTGAATCAGGAAGAAAATCGGAAAGCAGATGAACCTCGTGTCTCAGGAACGGATTCGGTCTGCAACAGCGAAAGGACAGCAGGGGACGGAATCAATCAGTTGGTTGACGAAAATCCGATTGAATTGGATTCGAAGATGTGTTGCCTTCCGCCGCTGGCATCGCGTAGCAGTTCGCGTGAGAGGAAGGAGGATTTGAAGCTTATTAATGGCGTATCTTGAGCCCTAAATCGATGGGTACCCTCCGCAATTGATAATGTGAATATTTATTATTATAATAGAAGCCAATTTGTAATATTTTGGATGATTGGATGGTCTAACTCAAATA

mRNA sequence

ATGGGTACATGTGCTTCCCTTTACAACAGATCGGAATGCTCCGCCGTTAAGCCGCCGGCGCCACCCCAAACTACCACAGATCAGTTTGAGATTCCACCTTCACCTATTAAACACTTTAAGCTCCAAAACAATACCGATTCCGCCATTAAAGACATCTCTGTAATACCCAATCATCACAAGACTCCTTCTGGAAGTAAAGAAGAAGCTTTCTTTGATTCTCGAGCGTGGTTGGATTCTGATTGTGAAGATTTCTTCAGTGTCAAAGGAGATTTCACCCCTTCCTGCGGCAACACTCCGCTTCACCACCGATTTCCGGCGGAAACTCCCCGTACTAGCAGAGTCAGTGTCGCCAGCGCCGACAACGAAGCATCGAATTTCAACTTGCCGCCATTACCGACGAAGAGGAGAAAGAAACTGGCCGATCTGTTCCGAGAGAGCCTCGGGAATGAGGCGAGTTTTGCTTTCCTGAATCAGGAAGAAAATCGGAAAGCAGATGAACCTCGTGTCTCAGGAACGGATTCGGTCTGCAACAGCGAAAGGACAGCAGGGGACGGAATCAATCAGTTGGTTGACGAAAATCCGATTGAATTGGATTCGAAGATGTGTTGCCTTCCGCCGCTGGCATCGCGTAGCAGTTCGCGTGAGAGGAAGGAGGATTTGAAGCTTATTAATGGCGTATCTTGA

Coding sequence (CDS)

ATGGGTACATGTGCTTCCCTTTACAACAGATCGGAATGCTCCGCCGTTAAGCCGCCGGCGCCACCCCAAACTACCACAGATCAGTTTGAGATTCCACCTTCACCTATTAAACACTTTAAGCTCCAAAACAATACCGATTCCGCCATTAAAGACATCTCTGTAATACCCAATCATCACAAGACTCCTTCTGGAAGTAAAGAAGAAGCTTTCTTTGATTCTCGAGCGTGGTTGGATTCTGATTGTGAAGATTTCTTCAGTGTCAAAGGAGATTTCACCCCTTCCTGCGGCAACACTCCGCTTCACCACCGATTTCCGGCGGAAACTCCCCGTACTAGCAGAGTCAGTGTCGCCAGCGCCGACAACGAAGCATCGAATTTCAACTTGCCGCCATTACCGACGAAGAGGAGAAAGAAACTGGCCGATCTGTTCCGAGAGAGCCTCGGGAATGAGGCGAGTTTTGCTTTCCTGAATCAGGAAGAAAATCGGAAAGCAGATGAACCTCGTGTCTCAGGAACGGATTCGGTCTGCAACAGCGAAAGGACAGCAGGGGACGGAATCAATCAGTTGGTTGACGAAAATCCGATTGAATTGGATTCGAAGATGTGTTGCCTTCCGCCGCTGGCATCGCGTAGCAGTTCGCGTGAGAGGAAGGAGGATTTGAAGCTTATTAATGGCGTATCTTGA

Protein sequence

MGTCASLYNRSECSAVKPPAPPQTTTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHKTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASADNEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEENRKADEPRVSGTDSVCNSERTAGDGINQLVDENPIELDSKMCCLPPLASRSSSRERKEDLKLINGVS

Homology

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BLAST of CsaV3_2G034190 vs. NCBI nr
Match: XP_004138611.1 (PREDICTED: uncharacterized protein LOC101209518 [Cucumis sativus] >KGN63176.1 hypothetical protein Csa_2G406740 [Cucumis sativus])

HSP 1 Score: 464.2 bits (1193), Expect = 2.6e-127
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MGTCASLYNRSECSAVKPPAPPQTTTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHK 60
           MGTCASLYNRSECSAVKPPAPPQTTTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHK
Sbjct: 1   MGTCASLYNRSECSAVKPPAPPQTTTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHK 60

Query: 61  TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASAD 120
           TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASAD
Sbjct: 61  TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASAD 120

Query: 121 NEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEENRKADEPRVSGTDSVCNSER 180
           NEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEENRKADEPRVSGTDSVCNSER
Sbjct: 121 NEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEENRKADEPRVSGTDSVCNSER 180

Query: 181 TAGDGINQLVDENPIELDSKMCCLPPLASRSSSRERKEDLKLINGVS 228
           TAGDGINQLVDENPIELDSKMCCLPPLASRSSSRERKEDLKLINGVS
Sbjct: 181 TAGDGINQLVDENPIELDSKMCCLPPLASRSSSRERKEDLKLINGVS 227

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BLAST of CsaV3_2G034190 vs. NCBI nr
Match: XP_008441350.1 (PREDICTED: uncharacterized protein LOC103485490 [Cucumis melo])

HSP 1 Score: 418.3 bits (1074), Expect = 1.7e-113
Identity = 204/227 (89.87%), Postives = 213/227 (93.83%), Query Frame = 0


Query: 1   MGTCASLYNRSECSAVKPPAPPQTTTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHK 60
           MGTCASLYNRSECSAVKPPAPP+T TDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHK
Sbjct: 1   MGTCASLYNRSECSAVKPPAPPETMTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHK 60

Query: 61  TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASAD 120
           TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTS+VS +S D
Sbjct: 61  TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSKVSASSTD 120

Query: 121 NEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEENRKADEPRVSGTDSVCNSER 180
           NE SNF+LPPLP KRRKKLADLFRESLGNE SFAFLN EENRKADE RVSGTDSVCNSER
Sbjct: 121 NELSNFSLPPLPPKRRKKLADLFRESLGNEGSFAFLNDEENRKADEARVSGTDSVCNSER 180

Query: 181 TAGDGINQLVDENPIELDSKMCCLPPLASRSSSRERKEDLKLINGVS 228
           TAG+G++QLVDENP+EL+SKMCCLP L     SRERKEDLKLINGVS
Sbjct: 181 TAGEGMDQLVDENPMELNSKMCCLPALV----SRERKEDLKLINGVS 223

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BLAST of CsaV3_2G034190 vs. NCBI nr
Match: XP_022992625.1 (uncharacterized protein LOC111488914 [Cucurbita maxima])

HSP 1 Score: 329.3 bits (843), Expect = 1.0e-86
Identity = 165/228 (72.37%), Postives = 189/228 (82.89%), Query Frame = 0


Query: 1   MGTCASLYNRSECSAVK-PPAPPQTTTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHH 60
           MG+CASL +  ECSAVK PPAP +T TD+FEIPPSPIKH+KLQ+N DS  KDISV+P HH
Sbjct: 1   MGSCASLCSTPECSAVKPPPAPLETVTDKFEIPPSPIKHYKLQDNADSVFKDISVVPPHH 60

Query: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASA 120
           KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPS  NTP+HHRFPA TPR S+   A A
Sbjct: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFPAGTPRASQ---AGA 120

Query: 121 DNEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEENRKADEPRVSGTDSVCNSE 180
           D++ S FN  PLPTKRRKKLADLFRESLG+EASFAFLN  +NRK DEP + GT SV NSE
Sbjct: 121 DDKPSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSVRNSE 180

Query: 181 RTAGDGINQLVDENPIELDSKMCCLPPLASRSSSRERKEDLKLINGVS 228
           RT G+G++   D+N I  +SK CCLPPL SR+ SRER+E+LK++NGVS
Sbjct: 181 RTVGNGVD---DKNMIGFESKFCCLPPLVSRNGSREREEELKVVNGVS 222

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BLAST of CsaV3_2G034190 vs. NCBI nr
Match: XP_023550243.1 (uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.6 bits (823), Expect = 2.1e-84
Identity = 162/228 (71.05%), Postives = 188/228 (82.46%), Query Frame = 0


Query: 1   MGTCASLYNRSECSAVK-PPAPPQTTTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHH 60
           MG+CASL ++SECS VK PPAP +T  D+FEIPPSPIKH+KLQ+N DS  KDISV+P+HH
Sbjct: 1   MGSCASLCSQSECSPVKPPPAPSETVKDKFEIPPSPIKHYKLQHNADSVFKDISVVPHHH 60

Query: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASA 120
           KTPSGSKEEAFFDSRAWLDSD EDFFSVKGDFTPS  NTP+HHRFPA TPR S+   A A
Sbjct: 61  KTPSGSKEEAFFDSRAWLDSDSEDFFSVKGDFTPSRDNTPIHHRFPAGTPRASQ---ARA 120

Query: 121 DNEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEENRKADEPRVSGTDSVCNSE 180
           D++ S FN  PLPTKRRKKLADLFRESLG+EASFAFLN  +NRK +EP + GT SV NSE
Sbjct: 121 DDKPSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHNDNRKTEEPCLPGTGSVRNSE 180

Query: 181 RTAGDGINQLVDENPIELDSKMCCLPPLASRSSSRERKEDLKLINGVS 228
           RT G+G++   D+N I  +SK CCL PL SR+ SRERKE+LK++NGVS
Sbjct: 181 RTVGNGVD---DKNTIGFESKFCCLWPLVSRNGSRERKEELKVVNGVS 222

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BLAST of CsaV3_2G034190 vs. NCBI nr
Match: XP_022938376.1 (uncharacterized protein At3g27210-like [Cucurbita moschata])

HSP 1 Score: 306.6 bits (784), Expect = 7.0e-80
Identity = 157/228 (68.86%), Postives = 182/228 (79.82%), Query Frame = 0


Query: 1   MGTCASLYNRSECSAVK-PPAPPQTTTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHH 60
           MG+CASL ++SECSAVK PPAP ++  D+FEIPPSPIKH+KLQ+N DS  KDISV+P+HH
Sbjct: 1   MGSCASLCSKSECSAVKPPPAPSESVKDKFEIPPSPIKHYKLQDNADSVFKDISVVPHHH 60

Query: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASA 120
           KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPS  NTP+HHRF A TPR S+   A A
Sbjct: 61  KTPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSRDNTPIHHRFTAGTPRASQ---AGA 120

Query: 121 DNEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEENRKADEPRVSGTDSVCNSE 180
           D++ S FN  PLPTKRRKKLADLFRESLG+EASFAFLN  +NRK DEP + GT SV    
Sbjct: 121 DDKPSTFNSSPLPTKRRKKLADLFRESLGDEASFAFLNHNDNRKTDEPCLPGTGSV---- 180

Query: 181 RTAGDGINQLVDENPIELDSKMCCLPPLASRSSSRERKEDLKLINGVS 228
              G+G+    D+N I  +SK CCL  L SR+ SRER+EDLK++NGVS
Sbjct: 181 ---GNGV---ADKNMIGYESKFCCLARLVSRNGSREREEDLKVVNGVS 215

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BLAST of CsaV3_2G034190 vs. TAIR10
Match: AT5G40860.1 (unknown protein)

HSP 1 Score: 68.6 bits (166), Expect = 5.9e-12
Identity = 42/135 (31.11%), Postives = 69/135 (51.11%), Query Frame = 0


Query: 41  LQNNTDSAIKDISVIPNHHKTPSGSKEEAFFDSRAWLDSDCE-DFFSVKGDFTPSCGNTP 100
           + N   + +K      +  ++   SK+E +FDS  W  SD E DF+SV+GDFTPS GNTP
Sbjct: 65  VDNGLSAQVKSRWSFSSSKRSFGSSKDETYFDSHQWQQSDSEDDFYSVRGDFTPSVGNTP 124

Query: 101 LHHRFPAETPRTSRVSVASADNEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQE 160
                 + + +  R+     + E    +    P  RRKKL +LFR+S+  E +   L + 
Sbjct: 125 R----CSISEKLPRIHSPLFEGEKPRVSFSHSPAPRRKKLGELFRDSIREERA-VILEES 184

Query: 161 ENRKADEPRVSGTDS 175
              ++++ + S  D+
Sbjct: 185 SEYQSEKSKKSSCDN 194

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BLAST of CsaV3_2G034190 vs. TAIR10
Match: AT3G01860.1 (unknown protein)

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-11
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 63  SGSKEE-AFFDSRAWLDSDC-EDFFSVKGDFTPSCGNTPLHHRFPAETP 110
           SG+KE+  FFDSR WLDSDC +DF SV G+FTPS G TP+HH+F  +TP
Sbjct: 59  SGNKEDMIFFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTP 107

[Close]

BLAST of CsaV3_2G034190 vs. TAIR10
Match: AT3G27210.1 (unknown protein)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-10
Identity = 38/82 (46.34%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 70  FFDSRAWLDSDC-EDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASADNEASNFNL 129
           FFDS+ WL SD  +DF SV GDFTPS GNTP    F    PR    ++   + + S  + 
Sbjct: 85  FFDSQPWLQSDSDDDFHSVNGDFTPSLGNTP-KSSFSDRPPRFH--NLIFHEKKPSRGSS 144

Query: 130 PPLPTKRRKKLADLFRESLGNE 151
            P P  RRKKL +LFR+S+  E
Sbjct: 145 SPAPLPRRKKLGELFRDSIREE 163

[Close]

BLAST of CsaV3_2G034190 vs. Swiss-Prot
Match: sp|Q9LK32|Y3721_ARATH (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09
Identity = 38/82 (46.34%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 70  FFDSRAWLDSDC-EDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASADNEASNFNL 129
           FFDS+ WL SD  +DF SV GDFTPS GNTP    F    PR    ++   + + S  + 
Sbjct: 85  FFDSQPWLQSDSDDDFHSVNGDFTPSLGNTP-KSSFSDRPPRFH--NLIFHEKKPSRGSS 144

Query: 130 PPLPTKRRKKLADLFRESLGNE 151
            P P  RRKKL +LFR+S+  E
Sbjct: 145 SPAPLPRRKKLGELFRDSIREE 163

[Close]

BLAST of CsaV3_2G034190 vs. TrEMBL
Match: tr|A0A0A0LT18|A0A0A0LT18_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406740 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 1.7e-127
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MGTCASLYNRSECSAVKPPAPPQTTTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHK 60
           MGTCASLYNRSECSAVKPPAPPQTTTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHK
Sbjct: 1   MGTCASLYNRSECSAVKPPAPPQTTTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHK 60

Query: 61  TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASAD 120
           TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASAD
Sbjct: 61  TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASAD 120

Query: 121 NEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEENRKADEPRVSGTDSVCNSER 180
           NEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEENRKADEPRVSGTDSVCNSER
Sbjct: 121 NEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEENRKADEPRVSGTDSVCNSER 180

Query: 181 TAGDGINQLVDENPIELDSKMCCLPPLASRSSSRERKEDLKLINGVS 228
           TAGDGINQLVDENPIELDSKMCCLPPLASRSSSRERKEDLKLINGVS
Sbjct: 181 TAGDGINQLVDENPIELDSKMCCLPPLASRSSSRERKEDLKLINGVS 227

[Close]

BLAST of CsaV3_2G034190 vs. TrEMBL
Match: tr|A0A1S3B2S0|A0A1S3B2S0_CUCME (uncharacterized protein LOC103485490 OS=Cucumis melo OX=3656 GN=LOC103485490 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.1e-113
Identity = 204/227 (89.87%), Postives = 213/227 (93.83%), Query Frame = 0


Query: 1   MGTCASLYNRSECSAVKPPAPPQTTTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHK 60
           MGTCASLYNRSECSAVKPPAPP+T TDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHK
Sbjct: 1   MGTCASLYNRSECSAVKPPAPPETMTDQFEIPPSPIKHFKLQNNTDSAIKDISVIPNHHK 60

Query: 61  TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSRVSVASAD 120
           TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTS+VS +S D
Sbjct: 61  TPSGSKEEAFFDSRAWLDSDCEDFFSVKGDFTPSCGNTPLHHRFPAETPRTSKVSASSTD 120

Query: 121 NEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEENRKADEPRVSGTDSVCNSER 180
           NE SNF+LPPLP KRRKKLADLFRESLGNE SFAFLN EENRKADE RVSGTDSVCNSER
Sbjct: 121 NELSNFSLPPLPPKRRKKLADLFRESLGNEGSFAFLNDEENRKADEARVSGTDSVCNSER 180

Query: 181 TAGDGINQLVDENPIELDSKMCCLPPLASRSSSRERKEDLKLINGVS 228
           TAG+G++QLVDENP+EL+SKMCCLP L     SRERKEDLKLINGVS
Sbjct: 181 TAGEGMDQLVDENPMELNSKMCCLPALV----SRERKEDLKLINGVS 223

[Close]

BLAST of CsaV3_2G034190 vs. TrEMBL
Match: tr|A0A061ECX1|A0A061ECX1_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_017164 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.8e-32
Identity = 100/249 (40.16%), Postives = 131/249 (52.61%), Query Frame = 0


Query: 1   MGTCASLYNRSECSAVKPPAPPQTTTDQFEIPPSPIKH-------FKLQNNTDSAIKDIS 60
           MG+C S++  S+ SA+K      + TD+  IPPSP+K        F L   + S +KD+ 
Sbjct: 1   MGSCVSVHKSSQESAMKLGLSFGSKTDKLIIPPSPVKEKPAANCDFALNVQSPSTLKDL- 60

Query: 61  VIPNHHKTPSGSKEEAFFDSRAWLDSDCE-DFFSVKGDFTPSCGNTPLHHRFPAETPRTS 120
                     GSK+E FFDSRAWLDSDCE DFFSV GDFTPS GNTP+HH F   TP+  
Sbjct: 61  ----------GSKDETFFDSRAWLDSDCEDDFFSVNGDFTPSRGNTPVHHSFAMGTPQVK 120

Query: 121 RVSVASADNEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEEN----------- 180
           + +   +    S  +    PT ++KKL +LFRES+  +     LN   N           
Sbjct: 121 KGTEEGSPGSVSETS----PTGKKKKLVELFRESIREDQDVNELNTPRNQDLANGKIEAK 180

Query: 181 ---------RKAD-EPRVSGTDSVCNSERTAGDGINQLVDENPIELDSKMCCLPPLASRS 221
                    + AD  P VSG +S+C SERTA +G N +  E P +  S  CCLP L S  
Sbjct: 181 PTIQDLLPPKSADGTPYVSGANSLCTSERTA-NGDNPIFKEKPFK--SVQCCLPSLVSCK 231

[Close]

BLAST of CsaV3_2G034190 vs. TrEMBL
Match: tr|A0A1R3IRV7|A0A1R3IRV7_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_10269 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.5e-30
Identity = 100/252 (39.68%), Postives = 132/252 (52.38%), Query Frame = 0


Query: 1   MGTCASLYNRSECSAVKPPAPPQTTTDQFEIPPSPIKH----------FKLQNNTDSAIK 60
           MG+C S++  S+ SA+K      + TD   IPPSP+K           F L++ + S  +
Sbjct: 1   MGSCVSVHKSSQESAMKLGLSFGSKTDNLIIPPSPVKEKPAAAAANGDFTLKSQSPSTFR 60

Query: 61  DISVIPNHHKTPSGSKEEAFFDSRAWLDSDCE-DFFSVKGDFTPSCGNTPLHHRFPAETP 120
           D            GSK+E FFDSRAWLDSDCE DFFSV GDFTPS GNTP+HH F   TP
Sbjct: 61  DF-----------GSKDETFFDSRAWLDSDCEDDFFSVNGDFTPSRGNTPVHHNFSMGTP 120

Query: 121 RTSRVSVASADNEASNFNLPPLPTKRRKKLADLFRESL-----GNEASFAFLNQEENRKA 180
              RV  A+A   +        PT ++KKL +LFRES+     G+E + +      N K 
Sbjct: 121 ---RVVKAAAGEGSPGSASETSPTGKKKKLVELFRESIREDQDGDEQNASNNQDIANGKQ 180

Query: 181 D----------------EPRVSGTDSVCNSERTAGDGINQLVDENPIELDSKMCCLPPLA 221
           +                 P +SG++S C+SERTA +G + +  E P    S  CCLP L 
Sbjct: 181 EVKPTIQDILPPKSAEGTPYISGSNSRCSSERTA-NGDHSIFKEKPFR--SVQCCLPSLV 235

[Close]

BLAST of CsaV3_2G034190 vs. TrEMBL
Match: tr|A0A0D2RWH5|A0A0D2RWH5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_006G040600 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.3e-29
Identity = 101/226 (44.69%), Postives = 127/226 (56.19%), Query Frame = 0


Query: 1   MGTCASLYNRSE--CSAVKPPAPPQTTTD-QFEIPPSPIKHFKLQNNTDSAIKDISVIPN 60
           MG+C S++  S+   SA+K      + TD    IPPSP+K  K   N D A   IS  P 
Sbjct: 1   MGSCVSVHKSSQEPASAMKVGLSFGSKTDNNLIIPPSPVKE-KPVANGDFAF--ISQSPY 60

Query: 61  HHKTPSGSKEEAFFDSRAWLDSDCE-DFFSVKGDFTPSCGNTPLHHRFP-AETPRTSRVS 120
             K   GSKEE FFDSRA+LDSDCE DFFSV GDFTPS GNTP+HH F    TPR S+V+
Sbjct: 61  TFK-DFGSKEETFFDSRAYLDSDCEDDFFSVNGDFTPSRGNTPVHHSFSVGTTPRVSKVT 120

Query: 121 VASADNEASNFNLPPLPTKRRKKLADLFRESLGNEASFAFLNQEENRKADEPRVSGTDSV 180
           V  +        L   P  ++KKL +LFRES+  + +       ++       VSG  S+
Sbjct: 121 VEGSPMSV----LETSPMGKKKKLLELFRESVREDRNLT----SKSANVTPYHVSGATSL 180

Query: 181 CNSERTA-GDGINQLVDENPIELDSKMCCLPPLASRSSSRERKEDL 221
           C+SERTA GD  N +  E P  L S  CCLP   + SS  ERK+ +
Sbjct: 181 CSSERTANGDHDNPMFKEKP--LKSMQCCLPSFVTCSSFNERKKKM 212

The following BLAST results are available for this feature:

BLAST of CsaV3_2G034190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138611.1	2.6e-127	100.00	PREDICTED: uncharacterized protein LOC101209518 [Cucumis sativus] >KGN63176.1 hy...	[more]
XP_008441350.1	1.7e-113	89.87	PREDICTED: uncharacterized protein LOC103485490 [Cucumis melo]	[more]
XP_022992625.1	1.0e-86	72.37	uncharacterized protein LOC111488914 [Cucurbita maxima]	[more]
XP_023550243.1	2.1e-84	71.05	uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938376.1	7.0e-80	68.86	uncharacterized protein At3g27210-like [Cucurbita moschata]	[more]

BLAST of CsaV3_2G034190 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G40860.1	5.9e-12	31.11	unknown protein	[more]
AT3G01860.1	1.3e-11	65.31	unknown protein	[more]
AT3G27210.1	1.4e-10	46.34	unknown protein	[more]

BLAST of CsaV3_2G034190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LK32\|Y3721_ARATH	2.6e-09	46.34	Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV...	[more]

BLAST of CsaV3_2G034190 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LT18\|A0A0A0LT18_CUCSA	1.7e-127	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G406740 PE=4 SV=1	[more]
tr\|A0A1S3B2S0\|A0A1S3B2S0_CUCME	1.1e-113	89.87	uncharacterized protein LOC103485490 OS=Cucumis melo OX=3656 GN=LOC103485490 PE=...	[more]
tr\|A0A061ECX1\|A0A061ECX1_THECC	2.8e-32	40.16	Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_017164 PE=4 ...	[more]
tr\|A0A1R3IRV7\|A0A1R3IRV7_COCAP	1.5e-30	39.68	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_10269 PE=4 ...	[more]
tr\|A0A0D2RWH5\|A0A0D2RWH5_GOSRA	8.3e-29	44.69	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_006G040600 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR038947	At3g27210-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G034190.1	CsaV3_2G034190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..227
None	No IPR available	PANTHER	PTHR34280:SF2	SUBFAMILY NOT NAMED	coord: 1..220
IPR038947	At3g27210-like	PANTHER	PTHR34280	FAMILY NOT NAMED	coord: 1..220

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G034190	CSPI02G25690	Wild cucumber (PI 183967)	cpicucB081
CsaV3_2G034190	Cucsa.087670	Cucumber (Gy14) v1	cgycucB092
CsaV3_2G034190	CmaCh15G000810	Cucurbita maxima (Rimu)	cmacucB0326
CsaV3_2G034190	CmoCh15G000820	Cucurbita moschata (Rifu)	cmocucB0321
CsaV3_2G034190	Cp4.1LG13g11190	Cucurbita pepo (Zucchini)	cpecucB0195
CsaV3_2G034190	CsGy2G025320	Cucumber (Gy14) v2	cgybcucB065
CsaV3_2G034190	Carg24274	Silver-seed gourd	carcucB1054
CsaV3_2G034190	Cla006513	Watermelon (97103) v1	cucwmB170
CsaV3_2G034190	MELO3C008201	Melon (DHL92) v3.5.1	cucmeB121
CsaV3_2G034190	ClCG11G007020	Watermelon (Charleston Gray)	cucwcgB122
CsaV3_2G034190	Lsi03G003880	Bottle gourd (USVL1VR-Ls)	cuclsiB127
CsaV3_2G034190	MELO3C008201.2	Melon (DHL92) v3.6.1	cucmedB115
CsaV3_2G034190	Cla97C11G213960	Watermelon (97103) v2	cucwmbB117
CsaV3_2G034190	Bhi04G001979	Wax gourd	cucwgoB171

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G034190	Silver-seed gourd	carcucB0017
CsaV3_2G034190	Silver-seed gourd	carcucB0018
CsaV3_2G034190	Cucurbita maxima (Rimu)	cmacucB0824
CsaV3_2G034190	Cucurbita maxima (Rimu)	cmacucB0827
CsaV3_2G034190	Cucurbita moschata (Rifu)	cmocucB0810
CsaV3_2G034190	Cucurbita moschata (Rifu)	cmocucB0812
CsaV3_2G034190	Cucurbita pepo (Zucchini)	cpecucB0480
CsaV3_2G034190	Cucurbita pepo (Zucchini)	cpecucB0482
CsaV3_2G034190	Cucurbita pepo (Zucchini)	cpecucB0880