CsaV3_2G032830 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G032830
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	pentatricopeptide repeat-containing protein At3g22670, mitochondrial
Location	chr2 : 21690631 .. 21692265 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATACGTCAATCACAAATTCACACAATTTTTTTCTTGCGAAGATCCTTTCGTACTTGTTACTTAGCAAAACCTCTCTGCACCATTACTGGATCGACTGAGGTCTCTGAATCCCCCGACCTTCCAGACTGGATAAAGTTCTTCGATACTAAAACCTCTACACATTTAGAATCTGAGGACGATGTCTTTGTTATTCCTCCATTGGCGCATTGGCTCGAATCTCAAAAACTCGAAGACAACAATAAAGTTGTTCAAAAGAAATTGGGTGAGACGTGCAATAACGAAGTTGACAAAATAAGTACGATGCTAGAGAATCGATACCCATCACCGGAAAATGTTGCAGAAGCTTTGAATGGAAAGGCTTACAGGGTTTCAAACACTTTGGTTGCACAGCTGCTGAAGAGATTTCATAATGATTGGATCCAAGCATATGGTATTTTCAAGTGGGCAAAAGACCAAATTCCTTATCGGCATTCACCTGAATCTTACAACTCCATGGTTGATATCTTGGGGAAGGCTAAAAACTTTAGACTTATGTGGGAGTTAGTGGATGAGATGAATCATTTAGCTGGATCTGTGAGTTTGGAGACGATGAGTAAGGTTATAAGGAGGCTTGCGAGGGCTGGTAGGCATCAGGAAGCAATCCATGCATTCCGGAATATAGAGAAATATGGGATTAGTACAGACACGACAGCCATGAATGTGTTGATGGATGCATTAGTCAAGGAGGCCAGCGTTGAAGATGCCCATAATGTGTTTCGAGAATTGAAGTGTTCAATACCTTTCAATTTGGCCTCTTTCAATGTTCTAATACACGGGTACTGCAAAGCTAAGAAGCTCGATGAGGCGTGGAAGATTATGGGGGAAGTTGAGAAAAGTGGACTTGAACCTGATGTGATCTCCTACACTGCTTTTATTGAAGCTCATTGCCGTGAAAAGGACTTCCGGAATGTGGATAAAGTCCTGGTGCAAATGGAGCATAAGGGATGCAAGCCTAATGTAATAACTTTCACCATTATAATGCATGCTCTAGGGAAGGCAAAACAGATTAATGAAGCTCTAAAAGTATATGAGAAGATGAAGAAAGAGGGTTGTGTGCCTGATAGTTCATTCTACAGCTCCCTGATATTCATTCTTGGTAAAGCCGGTAGGCTCACTGATGTTAAGGAGATAGTAGAGGATATGGAAAAGCAGGGGGTTACTCCAGATGTGTTGACATATAACACATTGATATCTTGTGCTTGTGCGCATTCACAGGAAGAGACAGCTCTGACATTGCTACTGAAAATGGAGGAGGTTTCGTGCAAGCCAGACCTCAAGACTTACCACCCTTTGTTGAAGATGTTTTGTAGAAAGAAGAGAATGAAGGTGCTGAAGTTTTTGTTAGATCACATGTTCAAGAATGATGTAAGTATTGAAGCTGGGACTTATGCAATTCTGGTACGGGGACTGTGCGAGAATGGGAAACTCCATCTAGCTTGCTCTTTCTTTGGGGAAATGCTGTCGAAGGCGATGGTTCCTAAAGATTCCACATTCAAGATGTTGAAGGAAGAACTTGAAAGGAAAAGTATGTTAGAAGAAATGAAAATCATAGAGAATTTGATGTTCTGTGCAACAAATCAAGATACAAGTTAA

mRNA sequence

ATGATACGTCAATCACAAATTCACACAATTTTTTTCTTGCGAAGATCCTTTCGTACTTGTTACTTAGCAAAACCTCTCTGCACCATTACTGGATCGACTGAGGTCTCTGAATCCCCCGACCTTCCAGACTGGATAAAGTTCTTCGATACTAAAACCTCTACACATTTAGAATCTGAGGACGATGTCTTTGTTATTCCTCCATTGGCGCATTGGCTCGAATCTCAAAAACTCGAAGACAACAATAAAGTTGTTCAAAAGAAATTGGGTGAGACGTGCAATAACGAAGTTGACAAAATAAGTACGATGCTAGAGAATCGATACCCATCACCGGAAAATGTTGCAGAAGCTTTGAATGGAAAGGCTTACAGGGTTTCAAACACTTTGGTTGCACAGCTGCTGAAGAGATTTCATAATGATTGGATCCAAGCATATGGTATTTTCAAGTGGGCAAAAGACCAAATTCCTTATCGGCATTCACCTGAATCTTACAACTCCATGGTTGATATCTTGGGGAAGGCTAAAAACTTTAGACTTATGTGGGAGTTAGTGGATGAGATGAATCATTTAGCTGGATCTGTGAGTTTGGAGACGATGAGTAAGGTTATAAGGAGGCTTGCGAGGGCTGGTAGGCATCAGGAAGCAATCCATGCATTCCGGAATATAGAGAAATATGGGATTAGTACAGACACGACAGCCATGAATGTGTTGATGGATGCATTAGTCAAGGAGGCCAGCGTTGAAGATGCCCATAATGTGTTTCGAGAATTGAAGTGTTCAATACCTTTCAATTTGGCCTCTTTCAATGTTCTAATACACGGGTACTGCAAAGCTAAGAAGCTCGATGAGGCGTGGAAGATTATGGGGGAAGTTGAGAAAAGTGGACTTGAACCTGATGTGATCTCCTACACTGCTTTTATTGAAGCTCATTGCCGTGAAAAGGACTTCCGGAATGTGGATAAAGTCCTGGTGCAAATGGAGCATAAGGGATGCAAGCCTAATGTAATAACTTTCACCATTATAATGCATGCTCTAGGGAAGGCAAAACAGATTAATGAAGCTCTAAAAGTATATGAGAAGATGAAGAAAGAGGGTTGTGTGCCTGATAGTTCATTCTACAGCTCCCTGATATTCATTCTTGGTAAAGCCGGTAGGCTCACTGATGTTAAGGAGATAGTAGAGGATATGGAAAAGCAGGGGGTTACTCCAGATGTGTTGACATATAACACATTGATATCTTGTGCTTGTGCGCATTCACAGGAAGAGACAGCTCTGACATTGCTACTGAAAATGGAGGAGGTTTCGTGCAAGCCAGACCTCAAGACTTACCACCCTTTGTTGAAGATGTTTTGTAGAAAGAAGAGAATGAAGGTGCTGAAGTTTTTGTTAGATCACATGTTCAAGAATGATGTAAGTATTGAAGCTGGGACTTATGCAATTCTGGTACGGGGACTGTGCGAGAATGGGAAACTCCATCTAGCTTGCTCTTTCTTTGGGGAAATGCTGTCGAAGGCGATGGTTCCTAAAGATTCCACATTCAAGATGTTGAAGGAAGAACTTGAAAGGAAAAGTATGTTAGAAGAAATGAAAATCATAGAGAATTTGATGTTCTGTGCAACAAATCAAGATACAAGTTAA

Coding sequence (CDS)

ATGATACGTCAATCACAAATTCACACAATTTTTTTCTTGCGAAGATCCTTTCGTACTTGTTACTTAGCAAAACCTCTCTGCACCATTACTGGATCGACTGAGGTCTCTGAATCCCCCGACCTTCCAGACTGGATAAAGTTCTTCGATACTAAAACCTCTACACATTTAGAATCTGAGGACGATGTCTTTGTTATTCCTCCATTGGCGCATTGGCTCGAATCTCAAAAACTCGAAGACAACAATAAAGTTGTTCAAAAGAAATTGGGTGAGACGTGCAATAACGAAGTTGACAAAATAAGTACGATGCTAGAGAATCGATACCCATCACCGGAAAATGTTGCAGAAGCTTTGAATGGAAAGGCTTACAGGGTTTCAAACACTTTGGTTGCACAGCTGCTGAAGAGATTTCATAATGATTGGATCCAAGCATATGGTATTTTCAAGTGGGCAAAAGACCAAATTCCTTATCGGCATTCACCTGAATCTTACAACTCCATGGTTGATATCTTGGGGAAGGCTAAAAACTTTAGACTTATGTGGGAGTTAGTGGATGAGATGAATCATTTAGCTGGATCTGTGAGTTTGGAGACGATGAGTAAGGTTATAAGGAGGCTTGCGAGGGCTGGTAGGCATCAGGAAGCAATCCATGCATTCCGGAATATAGAGAAATATGGGATTAGTACAGACACGACAGCCATGAATGTGTTGATGGATGCATTAGTCAAGGAGGCCAGCGTTGAAGATGCCCATAATGTGTTTCGAGAATTGAAGTGTTCAATACCTTTCAATTTGGCCTCTTTCAATGTTCTAATACACGGGTACTGCAAAGCTAAGAAGCTCGATGAGGCGTGGAAGATTATGGGGGAAGTTGAGAAAAGTGGACTTGAACCTGATGTGATCTCCTACACTGCTTTTATTGAAGCTCATTGCCGTGAAAAGGACTTCCGGAATGTGGATAAAGTCCTGGTGCAAATGGAGCATAAGGGATGCAAGCCTAATGTAATAACTTTCACCATTATAATGCATGCTCTAGGGAAGGCAAAACAGATTAATGAAGCTCTAAAAGTATATGAGAAGATGAAGAAAGAGGGTTGTGTGCCTGATAGTTCATTCTACAGCTCCCTGATATTCATTCTTGGTAAAGCCGGTAGGCTCACTGATGTTAAGGAGATAGTAGAGGATATGGAAAAGCAGGGGGTTACTCCAGATGTGTTGACATATAACACATTGATATCTTGTGCTTGTGCGCATTCACAGGAAGAGACAGCTCTGACATTGCTACTGAAAATGGAGGAGGTTTCGTGCAAGCCAGACCTCAAGACTTACCACCCTTTGTTGAAGATGTTTTGTAGAAAGAAGAGAATGAAGGTGCTGAAGTTTTTGTTAGATCACATGTTCAAGAATGATGTAAGTATTGAAGCTGGGACTTATGCAATTCTGGTACGGGGACTGTGCGAGAATGGGAAACTCCATCTAGCTTGCTCTTTCTTTGGGGAAATGCTGTCGAAGGCGATGGTTCCTAAAGATTCCACATTCAAGATGTTGAAGGAAGAACTTGAAAGGAAAAGTATGTTAGAAGAAATGAAAATCATAGAGAATTTGATGTTCTGTGCAACAAATCAAGATACAAGTTAA

Protein sequence

MIRQSQIHTIFFLRRSFRTCYLAKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESEDDVFVIPPLAHWLESQKLEDNNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLEEMKIIENLMFCATNQDTS

Homology

[Close]

BLAST of CsaV3_2G032830 vs. NCBI nr
Match: XP_011649862.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g22670, mitochondrial [Cucumis sativus] >KGN63034.1 hypothetical protein Csa_2G385030 [Cucumis sativus])

HSP 1 Score: 630.2 bits (1624), Expect = 6.6e-177
Identity = 544/544 (100.00%), Postives = 544/544 (100.00%), Query Frame = 0


Query: 1   MIRQSQIHTIFFLRRSFRTCYLAKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESED 60
           MIRQSQIHTIFFLRRSFRTCYLAKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESED
Sbjct: 5   MIRQSQIHTIFFLRRSFRTCYLAKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESED 64

Query: 61  DVFVIPPLAHWLESQKLEDNNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGK 120
           DVFVIPPLAHWLESQKLEDNNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGK
Sbjct: 65  DVFVIPPLAHWLESQKLEDNNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGK 124

Query: 121 AYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMW 180
           AYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMW
Sbjct: 125 AYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMW 184

Query: 181 ELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDAL 240
           ELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDAL
Sbjct: 185 ELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDAL 244

Query: 241 VKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPXXX 300
           VKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPXXX
Sbjct: 245 VKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPXXX 304

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 364

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 365 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 424

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 425 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 484

Query: 481 XXXXXXXXXXXXACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLEEMKIIENLMFCATN 540
           XXXXXXXXXXXXACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLEEMKIIENLMFCATN
Sbjct: 485 XXXXXXXXXXXXACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLEEMKIIENLMFCATN 544

Query: 541 QDTS 545
           QDTS
Sbjct: 545 QDTS 548

[Close]

BLAST of CsaV3_2G032830 vs. NCBI nr
Match: XP_008456563.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g22670, mitochondrial [Cucumis melo])

HSP 1 Score: 538.5 bits (1386), Expect = 2.6e-149
Identity = 264/295 (89.49%), Postives = 276/295 (93.56%), Query Frame = 0


Query: 1   MIRQSQIHTIFFLRRSFRTCYLAKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESED 60
           M+ QS+I  IFFLRRSFR CYLAKPLCTITGST+V ESPDLP+WIKFFDTKT TH ESED
Sbjct: 1   MVLQSKICAIFFLRRSFRICYLAKPLCTITGSTQVPESPDLPNWIKFFDTKTCTHSESED 60

Query: 61  DVFVIPPLAHWLESQKLEDNNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGK 120
           DVFVIPPLAHWLE QKL+DN+KVVQKKL ET +NEVDKISTMLENRYPSPENVAEALNGK
Sbjct: 61  DVFVIPPLAHWLEPQKLKDNDKVVQKKLVETSDNEVDKISTMLENRYPSPENVAEALNGK 120

Query: 121 AYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMW 180
           AYRVSN L+ QLLKRF NDWI+AYGIFKWAKDQ PYRHSPESYNSMVDILGKAKNFRLMW
Sbjct: 121 AYRVSNNLIGQLLKRFQNDWIRAYGIFKWAKDQTPYRHSPESYNSMVDILGKAKNFRLMW 180

Query: 181 ELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDAL 240
           ELVDEMNHLAG VSLETMSKVIRRLA+AGRHQEAI AFR+I KYG+STDTTAMNVLMDAL
Sbjct: 181 ELVDEMNHLAGCVSLETMSKVIRRLAKAGRHQEAIDAFRSIGKYGVSTDTTAMNVLMDAL 240

Query: 241 VKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGL 296
           VKE SVEDAHNVF ELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGL
Sbjct: 241 VKEGSVEDAHNVFEELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGL 295

[Close]

BLAST of CsaV3_2G032830 vs. NCBI nr
Match: XP_023527160.1 (pentatricopeptide repeat-containing protein At3g22670, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 502.3 bits (1292), Expect = 2.1e-138
Identity = 477/544 (87.68%), Postives = 503/544 (92.46%), Query Frame = 0


Query: 1   MIRQSQIHTIFFLRRSFRTCYLAKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESED 60
           M  Q Q   IF LR S R+CY AKPLCTI+GST+ SESP+LPDW+KFFDT++S+H +SED
Sbjct: 1   MASQLQTRIIFSLRNSIRSCYSAKPLCTISGSTQDSESPELPDWVKFFDTRSSSHSDSED 60

Query: 61  DVFVIPPLAHWLESQKLEDNNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGK 120
           DVFVIPPLAHWLESQ+LED++KV +KKLGE  +NEVDKIS ML+NRYPSPENVAE LNG+
Sbjct: 61  DVFVIPPLAHWLESQRLEDHSKVGKKKLGEANDNEVDKISLMLKNRYPSPENVAETLNGR 120

Query: 121 AYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMW 180
           AYRVSNTLVAQLLKRF NDWI AYG+FKWAKDQ PYRHSPESYNSMVDILG+AK FRLMW
Sbjct: 121 AYRVSNTLVAQLLKRFGNDWIPAYGVFKWAKDQTPYRHSPESYNSMVDILGRAKKFRLMW 180

Query: 181 ELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDAL 240
           ELVDEM+H+A  VSLETMSKVIRRLARAGR+QEAI AF+ IE+YG+S DT AMNVLMDAL
Sbjct: 181 ELVDEMSHIAAYVSLETMSKVIRRLARAGRYQEAIEAFQRIEEYGVSKDTAAMNVLMDAL 240

Query: 241 VKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPXXX 300
           VKE SVEDAHNVF ELK SIPFNL SFNVLIHGYCKA+KLDEAWKIM EVEK GLEPXXX
Sbjct: 241 VKEGSVEDAHNVFEELKGSIPFNLTSFNVLIHGYCKARKLDEAWKIMEEVEKQGLEPXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLEEMKIIENLMFCATN 540
           XXXXXXXXXX  ACSFFGEM+SK MVPKDSTFKMLKEELERK M EEMKIIE LM CAT 
Sbjct: 481 XXXXXXXXXXHLACSFFGEMVSKGMVPKDSTFKMLKEELERKGMSEEMKIIEKLMLCATE 540

Query: 541 QDTS 545
           QDTS
Sbjct: 541 QDTS 544

[Close]

BLAST of CsaV3_2G032830 vs. NCBI nr
Match: XP_022955800.1 (pentatricopeptide repeat-containing protein At3g22670, mitochondrial [Cucurbita moschata])

HSP 1 Score: 499.2 bits (1284), Expect = 1.8e-137
Identity = 474/544 (87.13%), Postives = 503/544 (92.46%), Query Frame = 0


Query: 1   MIRQSQIHTIFFLRRSFRTCYLAKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESED 60
           M  Q Q   IF LR S R+CY AKPLCTI+GST+ SESP+LPDW+KFFDT++S+H +SED
Sbjct: 1   MASQLQTRIIFSLRNSIRSCYSAKPLCTISGSTQDSESPELPDWVKFFDTRSSSHSDSED 60

Query: 61  DVFVIPPLAHWLESQKLEDNNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGK 120
           DVFVIPPLAHWLESQ+LED+++V +KKLGE  +NEVDKIS ML+NRYPSPENVAE LNG+
Sbjct: 61  DVFVIPPLAHWLESQRLEDHSEVGKKKLGEANDNEVDKISMMLKNRYPSPENVAETLNGR 120

Query: 121 AYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMW 180
           AYRVSNTLVAQLLKRF NDWI AYG+FKWAKDQ PYRHSPESYNSMVDILG+AK FRLMW
Sbjct: 121 AYRVSNTLVAQLLKRFGNDWIPAYGVFKWAKDQTPYRHSPESYNSMVDILGRAKKFRLMW 180

Query: 181 ELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDAL 240
           ELVDEM+H+A  VSLETMSKVIRRLARAGR+QEAI AF+ IE+YG+S DT AMNVLMDAL
Sbjct: 181 ELVDEMSHIAAYVSLETMSKVIRRLARAGRYQEAIEAFQRIEEYGVSKDTAAMNVLMDAL 240

Query: 241 VKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPXXX 300
           VKE SVEDAHNVF ELK SIPFNL SFNVLIHGYCKA+KLDEAWKIM E+E+ GLEP XX
Sbjct: 241 VKEGSVEDAHNVFEELKGSIPFNLTSFNVLIHGYCKARKLDEAWKIMEEIERQGLEPDXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLEEMKIIENLMFCATN 540
           XXXXXXXXXXX ACSFFGEM+SK MVPKDSTFKMLKEELERK M EEMKIIE LM CAT 
Sbjct: 481 XXXXXXXXXXXLACSFFGEMVSKGMVPKDSTFKMLKEELERKGMSEEMKIIEKLMLCATE 540

Query: 541 QDTS 545
           QDTS
Sbjct: 541 QDTS 544

[Close]

BLAST of CsaV3_2G032830 vs. NCBI nr
Match: XP_022979545.1 (pentatricopeptide repeat-containing protein At3g22670, mitochondrial [Cucurbita maxima])

HSP 1 Score: 491.5 bits (1264), Expect = 3.7e-135
Identity = 473/544 (86.95%), Postives = 499/544 (91.73%), Query Frame = 0


Query: 1   MIRQSQIHTIFFLRRSFRTCYLAKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESED 60
           M  Q Q   IF LR S RTCY A P CTI+GST+ SESP+LPDW+KFFDT +S+  +SED
Sbjct: 1   MASQLQTRIIFSLRNSIRTCYSANPFCTISGSTQDSESPELPDWVKFFDTGSSSRSDSED 60

Query: 61  DVFVIPPLAHWLESQKLEDNNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGK 120
           DVFVIPPLAHW+ESQ+LED++KV +KKLGE  +NE+DKIS ML+NRYPSPENVAE LNG+
Sbjct: 61  DVFVIPPLAHWVESQRLEDHSKVGKKKLGEANDNEIDKISMMLKNRYPSPENVAETLNGR 120

Query: 121 AYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMW 180
           AYRVSNTLVAQLLKRF NDWI AYG+FKWAKDQ PYRHSPESYNSMVDILG+AK FRLMW
Sbjct: 121 AYRVSNTLVAQLLKRFGNDWIPAYGVFKWAKDQTPYRHSPESYNSMVDILGRAKKFRLMW 180

Query: 181 ELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDAL 240
           ELVDEM+HLA  VSLETMSKVIRRLARAGR+QEAI AF+ IE+YG+S DT AMNVLMDAL
Sbjct: 181 ELVDEMSHLAAYVSLETMSKVIRRLARAGRYQEAIEAFQRIEEYGVSKDTAAMNVLMDAL 240

Query: 241 VKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPXXX 300
           VKE SVEDAHNVF ELK SIPFNL SFNVLIHGYCKA+KLDEAWKIM EVE+ GLEPXXX
Sbjct: 241 VKEGSVEDAHNVFEELKGSIPFNLTSFNVLIHGYCKARKLDEAWKIMEEVERQGLEPXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLEEMKIIENLMFCATN 540
           XXXXXXXXXXX ACSFFGEM+SK MVPKDSTFKMLKEELERK M EE KIIE LM CAT 
Sbjct: 481 XXXXXXXXXXXLACSFFGEMVSKGMVPKDSTFKMLKEELERKGMSEETKIIEKLMLCATE 540

Query: 541 QDTS 545
           QDTS
Sbjct: 541 QDTS 544

[Close]

BLAST of CsaV3_2G032830 vs. TAIR10
Match: AT3G22670.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 233.0 bits (593), Expect = 4.3e-61
Identity = 130/293 (44.37%), Postives = 187/293 (63.82%), Query Frame = 0


Query: 2   IRQSQIHTIFFLRRSFRTCYLAKPLCTITGSTEVSESPDLPDWIKFF----DTKTSTHLE 61
           +R S++ +    RR F+  +L             +ESP+LP WIK F     + +S+ + 
Sbjct: 5   LRISKLVSYTLPRRIFQRRFLVTNNTAEESPIVAAESPELPSWIKDFLSNKPSSSSSSVS 64

Query: 62  SEDDVFVIPPLAHWLESQKLEDNNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEAL 121
            +D+ FVIP LA+W+ESQK     +V +  + +    ++DK+   L  +  S E+V + L
Sbjct: 65  KDDEDFVIPSLANWVESQKF-SRQQVSEGNVVKKPVEDIDKVCDFLNKKDTSHEDVVKEL 124

Query: 122 NGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFR 181
           +     V+ +LV Q+L+RF N W QAYG F WA  Q  Y HS  +YN+MVD+LGK +NF 
Sbjct: 125 SKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFD 184

Query: 182 LMWELVDEMNHLAGS--VSLETMSKVIRRLARAGRHQEAIHAFRNIEK-YGISTDTTAMN 241
           LMWELV+EMN    S  V+L+TMSKV+RRLA++G++ +A+ AF  +EK YG+ TDT AMN
Sbjct: 185 LMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMN 244

Query: 242 VLMDALVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIM 288
            LMDALVKE S+E AH VF +L  +I  +  +FN+LIHG+CKA+K D+A  +M
Sbjct: 245 SLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMM 296

[Close]

BLAST of CsaV3_2G032830 vs. TAIR10
Match: AT3G04130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 109.0 bits (271), Expect = 9.3e-24
Identity = 59/141 (41.84%), Postives = 87/141 (61.70%), Query Frame = 0


Query: 120 KAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLM 179
           K   +S+ LV +LL RF +DW  A GI KWA+    ++HS ++Y+  VDILGKAK +  M
Sbjct: 81  KRVNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRM 140

Query: 180 WELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDA 239
            E V+ M      V+L T++K++RR A AG  +EA+  F  + ++G+  +T +MN+L+D 
Sbjct: 141 KEFVERMRG-DKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDT 200

Query: 240 LVKEASVEDAHNVFRELKCSI 261
           L KE  VE A  V  +LK  I
Sbjct: 201 LCKEKRVEQARVVLLQLKSHI 220

[Close]

BLAST of CsaV3_2G032830 vs. TAIR10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-22
Identity = 64/218 (29.36%), Postives = 106/218 (48.62%), Query Frame = 0


Query: 80  NNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHND 139
           N++    K  E   ++V+K   +L   +     +  ALN     +   L+ ++L R  + 
Sbjct: 68  NDRTKNSKYDEFA-SDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDA 127

Query: 140 WIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEM-NHLAGSVSLETM 199
               Y  F WA  Q  Y HS E Y SMV IL K + F  +W L++EM       +  E  
Sbjct: 128 GNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELF 187

Query: 200 SKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKC 259
             +++R A A   ++AI     + K+G   D      L+DAL K  SV+DA  +F +++ 
Sbjct: 188 VVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRM 247

Query: 260 SIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLE 297
             P NL  F  L++G+C+  K+ EA  ++ ++ ++G E
Sbjct: 248 RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFE 284

[Close]

BLAST of CsaV3_2G032830 vs. TAIR10
Match: AT1G20300.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 104.4 bits (259), Expect = 2.3e-22
Identity = 51/151 (33.77%), Postives = 82/151 (54.30%), Query Frame = 0


Query: 142 QAYGIFKWAKDQIPYRH-SPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSK 201
           Q+   F WA  +  Y H SP  YN M+D+ GK + F L W L+D M      +S+ET + 
Sbjct: 132 QSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTI 191

Query: 202 VIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSI 261
           +IRR  RAG   EA+H F  +E YG   D  A ++++  L ++    +A + F  LK   
Sbjct: 192 LIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRF 251

Query: 262 PFNLASFNVLIHGYCKAKKLDEAWKIMGEVE 292
             ++  +  L+ G+C+A ++ EA K+  E++
Sbjct: 252 EPDVIVYTNLVRGWCRAGEISEAEKVFKEMK 282

[Close]

BLAST of CsaV3_2G032830 vs. TAIR10
Match: AT5G15010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 3.9e-22
Identity = 61/206 (29.61%), Postives = 103/206 (50.00%), Query Frame = 0


Query: 90  ETCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKW 149
           E  + +V KIS ++++     + +   L     + SN LV ++L R  NDW  A+  F W
Sbjct: 91  ELVSEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVW 150

Query: 150 AKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGS-VSLETMSKVIRRLARA 209
           A  Q  Y  S   Y+SM+ ILGK + F   W L+DEM   + S V+ +T+  +IR+    
Sbjct: 151 AGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAV 210

Query: 210 GRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSIPFNLASFN 269
               +AI+ F   +++ +         L+ AL +  +V DA ++    K   PF+  SFN
Sbjct: 211 HDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFN 270

Query: 270 VLIHGYCKA----KKLDEAWKIMGEV 291
           ++++G+C      ++ +  W  MG V
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNV 296

[Close]

BLAST of CsaV3_2G032830 vs. Swiss-Prot
Match: sp|Q9LUJ4|PP248_ARATH (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 7.7e-60
Identity = 130/293 (44.37%), Postives = 187/293 (63.82%), Query Frame = 0


Query: 2   IRQSQIHTIFFLRRSFRTCYLAKPLCTITGSTEVSESPDLPDWIKFF----DTKTSTHLE 61
           +R S++ +    RR F+  +L             +ESP+LP WIK F     + +S+ + 
Sbjct: 5   LRISKLVSYTLPRRIFQRRFLVTNNTAEESPIVAAESPELPSWIKDFLSNKPSSSSSSVS 64

Query: 62  SEDDVFVIPPLAHWLESQKLEDNNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEAL 121
            +D+ FVIP LA+W+ESQK     +V +  + +    ++DK+   L  +  S E+V + L
Sbjct: 65  KDDEDFVIPSLANWVESQKF-SRQQVSEGNVVKKPVEDIDKVCDFLNKKDTSHEDVVKEL 124

Query: 122 NGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFR 181
           +     V+ +LV Q+L+RF N W QAYG F WA  Q  Y HS  +YN+MVD+LGK +NF 
Sbjct: 125 SKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFD 184

Query: 182 LMWELVDEMNHLAGS--VSLETMSKVIRRLARAGRHQEAIHAFRNIEK-YGISTDTTAMN 241
           LMWELV+EMN    S  V+L+TMSKV+RRLA++G++ +A+ AF  +EK YG+ TDT AMN
Sbjct: 185 LMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMN 244

Query: 242 VLMDALVKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIM 288
            LMDALVKE S+E AH VF +L  +I  +  +FN+LIHG+CKA+K D+A  +M
Sbjct: 245 SLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMM 296

[Close]

BLAST of CsaV3_2G032830 vs. Swiss-Prot
Match: sp|Q9M8W9|PP211_ARATH (Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g04130 PE=2 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-22
Identity = 59/141 (41.84%), Postives = 87/141 (61.70%), Query Frame = 0


Query: 120 KAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLM 179
           K   +S+ LV +LL RF +DW  A GI KWA+    ++HS ++Y+  VDILGKAK +  M
Sbjct: 81  KRVNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRM 140

Query: 180 WELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDA 239
            E V+ M      V+L T++K++RR A AG  +EA+  F  + ++G+  +T +MN+L+D 
Sbjct: 141 KEFVERMRG-DKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDT 200

Query: 240 LVKEASVEDAHNVFRELKCSI 261
           L KE  VE A  V  +LK  I
Sbjct: 201 LCKEKRVEQARVVLLQLKSHI 220

[Close]

BLAST of CsaV3_2G032830 vs. Swiss-Prot
Match: sp|Q9FH87|PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 3.2e-21
Identity = 64/218 (29.36%), Postives = 106/218 (48.62%), Query Frame = 0


Query: 80  NNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHND 139
           N++    K  E   ++V+K   +L   +     +  ALN     +   L+ ++L R  + 
Sbjct: 68  NDRTKNSKYDEFA-SDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDA 127

Query: 140 WIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEM-NHLAGSVSLETM 199
               Y  F WA  Q  Y HS E Y SMV IL K + F  +W L++EM       +  E  
Sbjct: 128 GNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELF 187

Query: 200 SKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKC 259
             +++R A A   ++AI     + K+G   D      L+DAL K  SV+DA  +F +++ 
Sbjct: 188 VVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRM 247

Query: 260 SIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLE 297
             P NL  F  L++G+C+  K+ EA  ++ ++ ++G E
Sbjct: 248 RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFE 284

[Close]

BLAST of CsaV3_2G032830 vs. Swiss-Prot
Match: sp|Q9LN22|PPR54_ARATH (Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g20300 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 4.1e-21
Identity = 51/151 (33.77%), Postives = 82/151 (54.30%), Query Frame = 0


Query: 142 QAYGIFKWAKDQIPYRH-SPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSK 201
           Q+   F WA  +  Y H SP  YN M+D+ GK + F L W L+D M      +S+ET + 
Sbjct: 132 QSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTI 191

Query: 202 VIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSI 261
           +IRR  RAG   EA+H F  +E YG   D  A ++++  L ++    +A + F  LK   
Sbjct: 192 LIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRF 251

Query: 262 PFNLASFNVLIHGYCKAKKLDEAWKIMGEVE 292
             ++  +  L+ G+C+A ++ EA K+  E++
Sbjct: 252 EPDVIVYTNLVRGWCRAGEISEAEKVFKEMK 282

[Close]

BLAST of CsaV3_2G032830 vs. Swiss-Prot
Match: sp|Q9LFQ4|PP383_ARATH (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 103.6 bits (257), Expect = 7.1e-21
Identity = 61/206 (29.61%), Postives = 103/206 (50.00%), Query Frame = 0


Query: 90  ETCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKW 149
           E  + +V KIS ++++     + +   L     + SN LV ++L R  NDW  A+  F W
Sbjct: 91  ELVSEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVW 150

Query: 150 AKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGS-VSLETMSKVIRRLARA 209
           A  Q  Y  S   Y+SM+ ILGK + F   W L+DEM   + S V+ +T+  +IR+    
Sbjct: 151 AGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAV 210

Query: 210 GRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSIPFNLASFN 269
               +AI+ F   +++ +         L+ AL +  +V DA ++    K   PF+  SFN
Sbjct: 211 HDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFN 270

Query: 270 VLIHGYCKA----KKLDEAWKIMGEV 291
           ++++G+C      ++ +  W  MG V
Sbjct: 271 IVLNGWCNVIGSPREAERVWMEMGNV 296

[Close]

BLAST of CsaV3_2G032830 vs. TrEMBL
Match: tr|A0A0A0LPW6|A0A0A0LPW6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G385030 PE=4 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 4.4e-177
Identity = 544/544 (100.00%), Postives = 544/544 (100.00%), Query Frame = 0


Query: 1   MIRQSQIHTIFFLRRSFRTCYLAKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESED 60
           MIRQSQIHTIFFLRRSFRTCYLAKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESED
Sbjct: 5   MIRQSQIHTIFFLRRSFRTCYLAKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESED 64

Query: 61  DVFVIPPLAHWLESQKLEDNNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGK 120
           DVFVIPPLAHWLESQKLEDNNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGK
Sbjct: 65  DVFVIPPLAHWLESQKLEDNNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGK 124

Query: 121 AYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMW 180
           AYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMW
Sbjct: 125 AYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMW 184

Query: 181 ELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDAL 240
           ELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDAL
Sbjct: 185 ELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDAL 244

Query: 241 VKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPXXX 300
           VKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPXXX
Sbjct: 245 VKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPXXX 304

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 364

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 365 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 424

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 425 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 484

Query: 481 XXXXXXXXXXXXACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLEEMKIIENLMFCATN 540
           XXXXXXXXXXXXACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLEEMKIIENLMFCATN
Sbjct: 485 XXXXXXXXXXXXACSFFGEMLSKAMVPKDSTFKMLKEELERKSMLEEMKIIENLMFCATN 544

Query: 541 QDTS 545
           QDTS
Sbjct: 545 QDTS 548

[Close]

BLAST of CsaV3_2G032830 vs. TrEMBL
Match: tr|A0A1S3C3M4|A0A1S3C3M4_CUCME (pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496479 PE=4 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.7e-149
Identity = 264/295 (89.49%), Postives = 276/295 (93.56%), Query Frame = 0


Query: 1   MIRQSQIHTIFFLRRSFRTCYLAKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESED 60
           M+ QS+I  IFFLRRSFR CYLAKPLCTITGST+V ESPDLP+WIKFFDTKT TH ESED
Sbjct: 1   MVLQSKICAIFFLRRSFRICYLAKPLCTITGSTQVPESPDLPNWIKFFDTKTCTHSESED 60

Query: 61  DVFVIPPLAHWLESQKLEDNNKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGK 120
           DVFVIPPLAHWLE QKL+DN+KVVQKKL ET +NEVDKISTMLENRYPSPENVAEALNGK
Sbjct: 61  DVFVIPPLAHWLEPQKLKDNDKVVQKKLVETSDNEVDKISTMLENRYPSPENVAEALNGK 120

Query: 121 AYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMW 180
           AYRVSN L+ QLLKRF NDWI+AYGIFKWAKDQ PYRHSPESYNSMVDILGKAKNFRLMW
Sbjct: 121 AYRVSNNLIGQLLKRFQNDWIRAYGIFKWAKDQTPYRHSPESYNSMVDILGKAKNFRLMW 180

Query: 181 ELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDAL 240
           ELVDEMNHLAG VSLETMSKVIRRLA+AGRHQEAI AFR+I KYG+STDTTAMNVLMDAL
Sbjct: 181 ELVDEMNHLAGCVSLETMSKVIRRLAKAGRHQEAIDAFRSIGKYGVSTDTTAMNVLMDAL 240

Query: 241 VKEASVEDAHNVFRELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGL 296
           VKE SVEDAHNVF ELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGL
Sbjct: 241 VKEGSVEDAHNVFEELKCSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGL 295

[Close]

BLAST of CsaV3_2G032830 vs. TrEMBL
Match: tr|A0A2N9ETI4|A0A2N9ETI4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9989 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 2.6e-92
Identity = 172/272 (63.24%), Postives = 216/272 (79.41%), Query Frame = 0


Query: 21  YLAKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESEDDVFVIPPLAHWLESQKLEDN 80
           +L   LCTIT ST+V+ESP+LP W+KF +T+  +  +S+DD FVIP LAHW+E+ KL D+
Sbjct: 29  FLYNSLCTITDSTQVTESPELPSWLKFSETQNPSTPDSDDD-FVIPSLAHWVENHKLHDH 88

Query: 81  NKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHNDW 140
           +KVV++ L E    +VDKIS +L+NRYPSP+NVAEALNG  +  SN+LV QLLKRF NDW
Sbjct: 89  SKVVKQMLTEITETDVDKISKILKNRYPSPDNVAEALNGSGFVASNSLVEQLLKRFSNDW 148

Query: 141 IQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSK 200
           + A+G+F WAK Q  YRHSPE ++SMVDILGK++NF  MWELV+EMN L   V+L TMSK
Sbjct: 149 VPAFGVFIWAKTQTGYRHSPELFDSMVDILGKSENFETMWELVEEMNELGRYVTLVTMSK 208

Query: 201 VIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSI 260
           V+RRLARAGR++EAI AFR IE++G+S DT AMNVLMDALVKE+SVE AH+VF E K  I
Sbjct: 209 VMRRLARAGRYKEAIEAFRKIEQFGVSKDTNAMNVLMDALVKESSVEHAHDVFLEFKEVI 268

Query: 261 PFNLASFNVLIHGYCKAKKLDEAWKIMGEVEK 293
           P +  SFNVLIHG+CKA+KLD A K M ++EK
Sbjct: 269 PLSSHSFNVLIHGWCKARKLDHAKKAMEDMEK 299

[Close]

BLAST of CsaV3_2G032830 vs. TrEMBL
Match: tr|A0A2I4EGQ2|A0A2I4EGQ2_9ROSI (pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Juglans regia OX=51240 GN=LOC108989430 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 5.0e-88
Identity = 161/277 (58.12%), Postives = 210/277 (75.81%), Query Frame = 0


Query: 21  YLAKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESEDDVFVIPPLAHWLESQKLEDN 80
           +L    CT   ST+++ESP+LP W+KF  T++S   +S++D FV+P LAHW+E+ +L D+
Sbjct: 29  FLCNHFCTRIDSTQITESPELPSWVKFGATQSSAAADSDED-FVVPSLAHWVENHRLHDH 88

Query: 81  NKVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHNDW 140
            KVV++ L E    +V+KIS +L+NRYPSP+NVA+AL+G  +  S +LV QLLKRF NDW
Sbjct: 89  GKVVKRMLSEAAETDVEKISKILQNRYPSPDNVAQALSGSGFIASKSLVEQLLKRFSNDW 148

Query: 141 IQAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSK 200
           I A+G+FKWAK Q  YRHSPE Y+ MVDILGK+K F  MWELV+EMN L G V+L TM K
Sbjct: 149 ILAFGVFKWAKAQTEYRHSPELYDFMVDILGKSKEFHPMWELVEEMNQLGGYVTLVTMGK 208

Query: 201 VIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSI 260
           V+RRLARA R+ EA+ AFRN+ ++G++ DTTAM+VLMDALVKE SVE A +VF E K  I
Sbjct: 209 VMRRLARARRYNEAVEAFRNMVRFGVNKDTTAMDVLMDALVKENSVEHARDVFLEFKGVI 268

Query: 261 PFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEP 298
           P N  SFN+LIHG+CKA+KLD A K M ++EK G +P
Sbjct: 269 PVNSQSFNILIHGWCKARKLDHAKKAMEDMEKHGFQP 304

[Close]

BLAST of CsaV3_2G032830 vs. TrEMBL
Match: tr|A0A2P4MGQ7|A0A2P4MGQ7_QUESU (Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_73479 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 1.1e-87
Identity = 161/269 (59.85%), Postives = 209/269 (77.70%), Query Frame = 0


Query: 29  ITGSTEVSESPDLPDWIKFFDTKTSTHLESEDDVFVIPPLAHWLESQKLEDNNKVVQKKL 88
           +T ST+++ESP+LP W+KF DT+  ++ +S+DD FVIP LA W+++ K  D+++VV++ L
Sbjct: 1   MTDSTQLTESPELPSWVKFSDTQNPSNPDSDDD-FVIPSLARWVDNYKFHDHSQVVKQML 60

Query: 89  GETCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFK 148
            E    EVDKI  +L+NRYPSP+N AEALNG  +  SN+LV QLLKRF NDW+ A+G+F 
Sbjct: 61  SENTETEVDKICKILKNRYPSPDNAAEALNGSGFIASNSLVEQLLKRFSNDWVPAFGVFA 120

Query: 149 WAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARA 208
           WAK Q  YRHS E Y+SMVDILGKA+ F  +WELV+EMN L G V+L TMSKV+RRLA+A
Sbjct: 121 WAKMQTGYRHSHEVYDSMVDILGKAEQFHTVWELVEEMNELGGYVTLVTMSKVMRRLAKA 180

Query: 209 GRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSIPFNLASFN 268
           G+++EAI AFR IE +G+S DTT+MNVLMDALVKE SVEDAH+VF   K  IP +  +FN
Sbjct: 181 GKYKEAIEAFRKIEMFGVSKDTTSMNVLMDALVKEGSVEDAHDVFLTFKKVIPLSAHTFN 240

Query: 269 VLIHGYCKAKKLDEAWKIMGEVEKSGLEP 298
           VLIHG+CKA+KLD A K M ++EK G +P
Sbjct: 241 VLIHGWCKARKLDHAKKAMEDMEKHGFQP 268

The following BLAST results are available for this feature:

BLAST of CsaV3_2G032830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649862.1	6.6e-177	100.00	PREDICTED: pentatricopeptide repeat-containing protein At3g22670, mitochondrial ...	[more]
XP_008456563.1	2.6e-149	89.49	PREDICTED: pentatricopeptide repeat-containing protein At3g22670, mitochondrial ...	[more]
XP_023527160.1	2.1e-138	87.68	pentatricopeptide repeat-containing protein At3g22670, mitochondrial [Cucurbita ...	[more]
XP_022955800.1	1.8e-137	87.13	pentatricopeptide repeat-containing protein At3g22670, mitochondrial [Cucurbita ...	[more]
XP_022979545.1	3.7e-135	86.95	pentatricopeptide repeat-containing protein At3g22670, mitochondrial [Cucurbita ...	[more]

BLAST of CsaV3_2G032830 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22670.1	4.3e-61	44.37	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G04130.1	9.3e-24	41.84	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G65820.1	1.8e-22	29.36	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G20300.1	2.3e-22	33.77	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G15010.1	3.9e-22	29.61	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CsaV3_2G032830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LUJ4\|PP248_ARATH	7.7e-60	44.37	Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop...	[more]
sp\|Q9M8W9\|PP211_ARATH	1.7e-22	41.84	Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidop...	[more]
sp\|Q9FH87\|PP447_ARATH	3.2e-21	29.36	Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th...	[more]
sp\|Q9LN22\|PPR54_ARATH	4.1e-21	33.77	Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidop...	[more]
sp\|Q9LFQ4\|PP383_ARATH	7.1e-21	29.61	Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop...	[more]

BLAST of CsaV3_2G032830 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LPW6\|A0A0A0LPW6_CUCSA	4.4e-177	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G385030 PE=4 SV=1	[more]
tr\|A0A1S3C3M4\|A0A1S3C3M4_CUCME	1.7e-149	89.49	pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Cucumis ...	[more]
tr\|A0A2N9ETI4\|A0A2N9ETI4_FAGSY	2.6e-92	63.24	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS9989 PE=4 SV=1	[more]
tr\|A0A2I4EGQ2\|A0A2I4EGQ2_9ROSI	5.0e-88	58.12	pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Juglans ...	[more]
tr\|A0A2P4MGQ7\|A0A2P4MGQ7_QUESU	1.1e-87	59.85	Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=5...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR033443	PPR_long
IPR011990	TPR-like_helical_dom_sf
IPR034913	MRPS27/PTCD2
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G032830.1	CsaV3_2G032830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 372..404 e-value: 3.0E-5 score: 21.9 coord: 162..186 e-value: 1.2E-4 score: 20.1 coord: 335..369 e-value: 3.1E-11 score: 40.7 coord: 300..334 e-value: 5.1E-7 score: 27.5 coord: 406..438 e-value: 2.5E-6 score: 25.3 coord: 476..507 e-value: 5.5E-6 score: 24.2 coord: 266..299 e-value: 4.2E-9 score: 34.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 286..346 e-value: 7.5E-14 score: 51.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 162..186 e-value: 0.012 score: 15.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 159..189 score: 7.925
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 403..437 score: 10.271
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 368..402 score: 10.852
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 263..297 score: 13.176
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 473..507 score: 10.578
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 194..228 score: 8.528
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 229..259 score: 7.991
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 438..472 score: 8.079
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 298..332 score: 11.137
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 333..367 score: 12.902
IPR034913	MRPS27/PTCD2	PFAM	PF10037	MRP-S27	coord: 195..282 e-value: 2.1E-6 score: 26.8
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 419..536 e-value: 4.1E-18 score: 67.3 coord: 325..418 e-value: 8.5E-31 score: 108.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 94..258 e-value: 2.5E-22 score: 81.3 coord: 259..324 e-value: 2.4E-16 score: 61.8
IPR033443	Pentacotripeptide-repeat region of PRORP	PFAM	PF17177	PPR_long	coord: 353..517 e-value: 1.3E-16 score: 60.5
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 21..541
None	No IPR available	PANTHER	PTHR24015:SF736	SUBFAMILY NOT NAMED	coord: 21..541

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G032830	CSPI02G24270	Wild cucumber (PI 183967)	cpicucB081
CsaV3_2G032830	Cucsa.163170	Cucumber (Gy14) v1	cgycucB247
CsaV3_2G032830	MELO3C019858	Melon (DHL92) v3.5.1	cucmeB125

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G032830	Silver-seed gourd	carcucB0289
CsaV3_2G032830	Silver-seed gourd	carcucB0720
CsaV3_2G032830	Cucumber (Gy14) v2	cgybcucB065
CsaV3_2G032830	Cucurbita maxima (Rimu)	cmacucB0328
CsaV3_2G032830	Cucurbita maxima (Rimu)	cmacucB0828
CsaV3_2G032830	Cucurbita moschata (Rifu)	cmocucB0323
CsaV3_2G032830	Cucurbita moschata (Rifu)	cmocucB0813
CsaV3_2G032830	Cucurbita moschata (Rifu)	cmocucB0925
CsaV3_2G032830	Cucurbita pepo (Zucchini)	cpecucB0193
CsaV3_2G032830	Cucurbita pepo (Zucchini)	cpecucB0483
CsaV3_2G032830	Bottle gourd (USVL1VR-Ls)	cuclsiB157
CsaV3_2G032830	Melon (DHL92) v3.6.1	cucmedB119
CsaV3_2G032830	Watermelon (Charleston Gray)	cucwcgB174
CsaV3_2G032830	Watermelon (97103) v1	cucwmB122
CsaV3_2G032830	Watermelon (97103) v2	cucwmbB161
CsaV3_2G032830	Wax gourd	cucwgoB176