CsaV3_2G032740 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G032740
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2 : 21630361 .. 21631151 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGTAACTATGTGTATGCATACTTGAAAATATTTTCCGAGTTCTTTTGTACTAGTAAATTTGTGCGGTGATTACTACAACTTTATGTGATTTCTCAACATTTCTACGATGCTTCGAGCTTTCAATCTCCATGTGCTTCAACATATTCCATATGCAGACTTTTTAAACTGCATATAAACCACAACTTTATCCATCAATCAAGTGTAAAACTTGCTTCAAATAAATCCTTTGAGTTGGATAAATTTGTTGAAGATAGACCTCAACTTGTTCTCCAACATGAAAACCTTCATTTCCGCAACCTTCCATGAAGTTGCTTTCATAATCTAAAAATGCCATCAGTGGAGAGAAATCCATGTGCTTCCTCTCGTTTTCGCGGAAATCCAACAACATTCATACAACTCAGATAGCAGTTTCAAAGATCCTTACAACAGCATTTAAATCTGGTATTAGAAAGGAAGAACTCGAGTTGCGACCTGTTTGAATATCCCTCCTTGATTCTTCAAACTTGACTTTGTAAATACATATTTTCTTCTTTGAGATCTTTGTGGTCTTGATCAAGAACCTATAAATTCTTTATTAGAACTTCTCTTTGCTTTAATGAGCTACAAATTTCTTATTTCGCAACAAAGTCGTTCGACGCCTCGAAAATCCTTTGAAAACTTTGTATCCATGTCTGTTTCCTTTCAACAAAGTTCCCAAAAACTTCCTCCTCTTAGCTTCAAGGCTTTAGTTCCATTTGCTTTAGACGCTCCACGTAATCGAACAACGGTTTCTTTGATACACGAACCGTGA

mRNA sequence

ATGTGCTTCCTCTCGTTTTCGCGGAAATCCAACAACATTCATACAACTCAGATAGCAGTTTCAAAGATCCTTACAACAGCATTTAAATCTGATCTTTGTGGTCTTGATCAAGAACCTATAAATTCTTTATTAGAACTTCTCTTTGCTTTAATGAGCTACAAATTTCTTATTTCGCAACAAAGTCGTTCGACGCCTCGAAAATCCTTTGAAAACTTTGTATCCATGTCTGTTTCCTTTCAACAAAGTTCCCAAAAACTTCCTCCTCTTAGCTTCAAGGCTTTAGTTCCATTTGCTTTAGACGCTCCACGTAATCGAACAACGGTTTCTTTGATACACGAACCGTGA

Coding sequence (CDS)

ATGTGCTTCCTCTCGTTTTCGCGGAAATCCAACAACATTCATACAACTCAGATAGCAGTTTCAAAGATCCTTACAACAGCATTTAAATCTGATCTTTGTGGTCTTGATCAAGAACCTATAAATTCTTTATTAGAACTTCTCTTTGCTTTAATGAGCTACAAATTTCTTATTTCGCAACAAAGTCGTTCGACGCCTCGAAAATCCTTTGAAAACTTTGTATCCATGTCTGTTTCCTTTCAACAAAGTTCCCAAAAACTTCCTCCTCTTAGCTTCAAGGCTTTAGTTCCATTTGCTTTAGACGCTCCACGTAATCGAACAACGGTTTCTTTGATACACGAACCGTGA

Protein sequence

MCFLSFSRKSNNIHTTQIAVSKILTTAFKSDLCGLDQEPINSLLELLFALMSYKFLISQQSRSTPRKSFENFVSMSVSFQQSSQKLPPLSFKALVPFALDAPRNRTTVSLIHEP
Homology
[Close]
BLAST of CsaV3_2G032740 vs. NCBI nr
Match: KGN63025.1 (hypothetical protein Csa_2G384450 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 1.2e-54
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MCFLSFSRKSNNIHTTQIAVSKILTTAFKSDLCGLDQEPINSLLELLFALMSYKFLISQQ 60
           MCFLSFSRKSNNIHTTQIAVSKILTTAFKSDLCGLDQEPINSLLELLFALMSYKFLISQQ
Sbjct: 1   MCFLSFSRKSNNIHTTQIAVSKILTTAFKSDLCGLDQEPINSLLELLFALMSYKFLISQQ 60

Query: 61  SRSTPRKSFENFVSMSVSFQQSSQKLPPLSFKALVPFALDAPRNRTTVSLIHEP 115
           SRSTPRKSFENFVSMSVSFQQSSQKLPPLSFKALVPFALDAPRNRTTVSLIHEP
Sbjct: 61  SRSTPRKSFENFVSMSVSFQQSSQKLPPLSFKALVPFALDAPRNRTTVSLIHEP 114

[Close]
BLAST of CsaV3_2G032740 vs. TrEMBL
Match: tr|A0A0A0LMB2|A0A0A0LMB2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G384450 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.6e-55
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MCFLSFSRKSNNIHTTQIAVSKILTTAFKSDLCGLDQEPINSLLELLFALMSYKFLISQQ 60
           MCFLSFSRKSNNIHTTQIAVSKILTTAFKSDLCGLDQEPINSLLELLFALMSYKFLISQQ
Sbjct: 1   MCFLSFSRKSNNIHTTQIAVSKILTTAFKSDLCGLDQEPINSLLELLFALMSYKFLISQQ 60

Query: 61  SRSTPRKSFENFVSMSVSFQQSSQKLPPLSFKALVPFALDAPRNRTTVSLIHEP 115
           SRSTPRKSFENFVSMSVSFQQSSQKLPPLSFKALVPFALDAPRNRTTVSLIHEP
Sbjct: 61  SRSTPRKSFENFVSMSVSFQQSSQKLPPLSFKALVPFALDAPRNRTTVSLIHEP 114

The following BLAST results are available for this feature:
BLAST of CsaV3_2G032740 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN63025.11.2e-54100.00hypothetical protein Csa_2G384450 [Cucumis sativus][more]
BLAST of CsaV3_2G032740 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G032740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G032740 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LMB2|A0A0A0LMB2_CUCSA7.6e-55100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G384450 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G032740.1CsaV3_2G032740.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G032740Silver-seed gourdcarcucB0289
CsaV3_2G032740Cucumber (Gy14) v2cgybcucB065
CsaV3_2G032740Cucumber (Gy14) v1cgycucB247
CsaV3_2G032740Cucurbita maxima (Rimu)cmacucB0328
CsaV3_2G032740Cucurbita moschata (Rifu)cmocucB0323
CsaV3_2G032740Cucurbita moschata (Rifu)cmocucB0925
CsaV3_2G032740Cucurbita pepo (Zucchini)cpecucB0193
CsaV3_2G032740Wild cucumber (PI 183967)cpicucB081
CsaV3_2G032740Bottle gourd (USVL1VR-Ls)cuclsiB157
CsaV3_2G032740Melon (DHL92) v3.5.1cucmeB125
CsaV3_2G032740Melon (DHL92) v3.6.1cucmedB119
CsaV3_2G032740Watermelon (Charleston Gray)cucwcgB174
CsaV3_2G032740Watermelon (97103) v1cucwmB122
CsaV3_2G032740Watermelon (97103) v2cucwmbB161
CsaV3_2G032740Wax gourdcucwgoB176