CsaV3_2G032510 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G032510
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	early nodulin-like protein 1
Location	chr2 : 21470225 .. 21471273 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCATTCTTCCATTCTTCTTTTCCAATTATTAATTCTTTTTCTCATCTCTCTTTCTCACCCATCATATAACAACCACAATCATCCATGGCTAATTTTTCAATAGCTCTGTCTCTCTTCACCTTTCTCCTCCTCTTCATCAGCTTCTCAGAGGCTAGAGAGATTTTAGTCGGAGGCAAATCCAATGCCTGGAAAATCCCTTCTTCTCAATCTCAATCTCTCAATCAATGGGCTGAAACCTCTCGCTTTCGCATTGGCGACACTCTCGGTAATTTTCTCTACTCTGTTTAGTTTTTTTTTTAATAAAATGGGAACCATCTTGAATTGTTTGTTTATTACTATGATTAGTGTGGGATTACGAAGATGGGAAAGATTCGGTACTGAAAGTGACGAAGGAAGATTATGAAGCCTGCAATACCGAAAACCCTGAACAGAGATTCGAAGATGGGAAGACGAAGGTGGAGCTAGAGAAGCCAGGACCATTTTATTTCATCAGTGGGGCAAAGGGTCACTGCGAGCAGGGCCAGAAGCTGATCGTTGTGGTCGTGACACCTCGCCGGAGGTTCATCGGGATCTCACCTGCGCCTTCTCCGGCGGAAAGTGAGGGTCCTGCGGTTGCTCCGTCGAGTGGAGCTGGTAATTTGAAGGTTGGGCTTTTGGCGGTGGTTGTAGGAATTTTGGGTGTTGGTGTTGGTTTGGTTTGAGGATTGGAACTGATCGATTTGGGGTTTCTTTCTCTGGGTTTTGTTTGATTTAGAATTGGATGATTAAAAAAAAAAATATAATATATTCATTGATTTTTCCATATTGAAATTCTTGTGTCTTTAGAATCTAAATCAATTCCCCATGCAAGCAGCTCACACTCCAGAAGCATTCAATAAGATGTGGAAGGAGGATGATCTTTTTTTTTTAAAAAAAAAGCAAAAATCAACGAACATTAATATGATTAAAACACTGGTGAGAGACCTAGAAAGATATGAGAAAAAAGCAATACAAAAAATAAGTTTTCCAATATCGCTAAATTGAAAACATATTATTTTTGAATGGGAC

mRNA sequence

ATGGCTAATTTTTCAATAGCTCTGTCTCTCTTCACCTTTCTCCTCCTCTTCATCAGCTTCTCAGAGGCTAGAGAGATTTTAGTCGGAGGCAAATCCAATGCCTGGAAAATCCCTTCTTCTCAATCTCAATCTCTCAATCAATGGGCTGAAACCTCTCGCTTTCGCATTGGCGACACTCTCGTGTGGGATTACGAAGATGGGAAAGATTCGGTACTGAAAGTGACGAAGGAAGATTATGAAGCCTGCAATACCGAAAACCCTGAACAGAGATTCGAAGATGGGAAGACGAAGGTGGAGCTAGAGAAGCCAGGACCATTTTATTTCATCAGTGGGGCAAAGGGTCACTGCGAGCAGGGCCAGAAGCTGATCGTTGTGGTCGTGACACCTCGCCGGAGGTTCATCGGGATCTCACCTGCGCCTTCTCCGGCGGAAAGTGAGGGTCCTGCGGTTGCTCCGTCGAGTGGAGCTGGTAATTTGAAGGTTGGGCTTTTGGCGGTGGTTGTAGGAATTTTGGGTGTTGGTGTTGGTTTGGTTTGA

Coding sequence (CDS)

ATGGCTAATTTTTCAATAGCTCTGTCTCTCTTCACCTTTCTCCTCCTCTTCATCAGCTTCTCAGAGGCTAGAGAGATTTTAGTCGGAGGCAAATCCAATGCCTGGAAAATCCCTTCTTCTCAATCTCAATCTCTCAATCAATGGGCTGAAACCTCTCGCTTTCGCATTGGCGACACTCTCGTGTGGGATTACGAAGATGGGAAAGATTCGGTACTGAAAGTGACGAAGGAAGATTATGAAGCCTGCAATACCGAAAACCCTGAACAGAGATTCGAAGATGGGAAGACGAAGGTGGAGCTAGAGAAGCCAGGACCATTTTATTTCATCAGTGGGGCAAAGGGTCACTGCGAGCAGGGCCAGAAGCTGATCGTTGTGGTCGTGACACCTCGCCGGAGGTTCATCGGGATCTCACCTGCGCCTTCTCCGGCGGAAAGTGAGGGTCCTGCGGTTGCTCCGTCGAGTGGAGCTGGTAATTTGAAGGTTGGGCTTTTGGCGGTGGTTGTAGGAATTTTGGGTGTTGGTGTTGGTTTGGTTTGA

Protein sequence

MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTLVWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQKLIVVVVTPRRRFIGISPAPSPAESEGPAVAPSSGAGNLKVGLLAVVVGILGVGVGLV

Homology

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BLAST of CsaV3_2G032510 vs. NCBI nr
Match: XP_004138700.1 (PREDICTED: early nodulin-like protein 1 [Cucumis sativus] >KGN62997.1 Phytocyanin-like arabinogalactan-protein [Cucumis sativus])

HSP 1 Score: 318.5 bits (815), Expect = 1.4e-83
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL 60
           MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL
Sbjct: 1   MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL 60

Query: 61  VWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ 120
           VWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ
Sbjct: 61  VWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ 120

Query: 121 KLIVVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGVGVGLV 179
           KLIVVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGVGVGLV
Sbjct: 121 KLIVVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGVGVGLV 178

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BLAST of CsaV3_2G032510 vs. NCBI nr
Match: XP_008445271.1 (PREDICTED: early nodulin-like protein 1 [Cucumis melo])

HSP 1 Score: 297.4 bits (760), Expect = 3.4e-77
Identity = 156/178 (87.64%), Postives = 158/178 (88.76%), Query Frame = 0


Query: 1   MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL 60
           MANFSIAL LFTFLL   SFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL
Sbjct: 1   MANFSIALFLFTFLL--FSFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL 60

Query: 61  VWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ 120
           VW YE+GKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ
Sbjct: 61  VWTYEEGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ 120

Query: 121 KLIVVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGVGVGLV 179
           KLIVVV+TPRRRFIGISP             PSSGA NLKVG LAVVVGILGVGVGLV
Sbjct: 121 KLIVVVLTPRRRFIGISPAPSPAESEGPAVAPSSGAANLKVGFLAVVVGILGVGVGLV 176

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BLAST of CsaV3_2G032510 vs. NCBI nr
Match: XP_022996782.1 (early nodulin-like protein 1 [Cucurbita maxima])

HSP 1 Score: 261.2 bits (666), Expect = 2.7e-66
Identity = 134/178 (75.28%), Postives = 145/178 (81.46%), Query Frame = 0


Query: 1   MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL 60
           MA  S AL L TFLLL  SFSEA EILVGGK+NAWK+PSSQSQSLNQWAETSRFR+GDTL
Sbjct: 1   MAGSSRALFLLTFLLL--SFSEATEILVGGKANAWKLPSSQSQSLNQWAETSRFRVGDTL 60

Query: 61  VWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ 120
           VW YE+GKDSVLKV KEDYEACNT+NPEQRFEDG TKV+L KPGPFYFISGAKGHCEQGQ
Sbjct: 61  VWSYEEGKDSVLKVGKEDYEACNTQNPEQRFEDGNTKVQLHKPGPFYFISGAKGHCEQGQ 120

Query: 121 KLIVVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGVGVGLV 179
           KL+VVVVTPRRRF+  SP             PSSGA +  VG LA VVGILG+GVG +
Sbjct: 121 KLVVVVVTPRRRFVSFSPAPSPAEIEGPAVSPSSGAASFNVGFLAAVVGILGLGVGFL 176

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BLAST of CsaV3_2G032510 vs. NCBI nr
Match: XP_022962176.1 (early nodulin-like protein 1 [Cucurbita moschata])

HSP 1 Score: 256.9 bits (655), Expect = 5.0e-65
Identity = 132/178 (74.16%), Postives = 141/178 (79.21%), Query Frame = 0


Query: 1   MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL 60
           MA  S AL L TFLL   SFSEA EILVGGK NAWK+PSSQSQSLNQWAETSRFR+GDTL
Sbjct: 1   MAGSSRALFLLTFLL--FSFSEATEILVGGKPNAWKLPSSQSQSLNQWAETSRFRVGDTL 60

Query: 61  VWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ 120
            W YE+GKDSVLKV KEDYEACNT+NPEQRFEDG TKVEL KPGPFYFISGAKGHCEQGQ
Sbjct: 61  AWSYEEGKDSVLKVGKEDYEACNTQNPEQRFEDGNTKVELHKPGPFYFISGAKGHCEQGQ 120

Query: 121 KLIVVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGVGVGLV 179
           KL+VVVVTPRRRF+  SP             PSSGA +  VG LA  VGILG+GVG +
Sbjct: 121 KLVVVVVTPRRRFVSFSPAPSPTEIEGPAVAPSSGAASFNVGFLAAAVGILGLGVGFL 176

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BLAST of CsaV3_2G032510 vs. NCBI nr
Match: XP_023546732.1 (early nodulin-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.5 bits (654), Expect = 6.6e-65
Identity = 132/178 (74.16%), Postives = 142/178 (79.78%), Query Frame = 0


Query: 1   MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL 60
           MA  S AL L T  LL  SFSEA EILVGGK NAWK+PSSQSQSLNQWAETSRFR+GDTL
Sbjct: 1   MAGSSRALFLLT--LLLFSFSEATEILVGGKPNAWKLPSSQSQSLNQWAETSRFRVGDTL 60

Query: 61  VWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ 120
           VW YE+GKDSVLKV KEDYEACNT+NPEQRFEDG TKVEL KPGPFYFISGAKGHC+QGQ
Sbjct: 61  VWSYEEGKDSVLKVGKEDYEACNTQNPEQRFEDGNTKVELHKPGPFYFISGAKGHCQQGQ 120

Query: 121 KLIVVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGVGVGLV 179
           KL+VVVVTPRRRF+  SP             PSSGA +  VG LA VVGILG+GVG +
Sbjct: 121 KLVVVVVTPRRRFVSFSPAPSPTEIEGPAVAPSSGAASFNVGFLAAVVGILGLGVGFL 176

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BLAST of CsaV3_2G032510 vs. TAIR10
Match: AT2G25060.1 (early nodulin-like protein 14)

HSP 1 Score: 160.6 bits (405), Expect = 8.9e-40
Identity = 81/171 (47.37%), Postives = 118/171 (69.01%), Query Frame = 0


Query: 1   MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL 60
           MA+ S+ +++F+ + LF S + A E+ VGGKS  WKIP S S S  +WA+ +RF++GD +
Sbjct: 7   MASSSLHVAIFSLIFLF-SLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFI 66

Query: 61  VWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ 120
           V+ YE GKDSVL+VTKE Y +CNT NP   + DG+TKV+L++ GPFYFISGA GHCE+GQ
Sbjct: 67  VFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQ 126

Query: 121 KLIVVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGIL 172
           KL +VV++PR   I  +P             P+  +G++++G   VV+G++
Sbjct: 127 KLSLVVISPRHSVISPAP-SPVEFEDGPALAPAPISGSVRLGGCYVVLGLV 175

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BLAST of CsaV3_2G032510 vs. TAIR10
Match: AT4G31840.1 (early nodulin-like protein 15)

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-37
Identity = 80/174 (45.98%), Postives = 112/174 (64.37%), Query Frame = 0


Query: 1   MANFSIALSLFTFL-LLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDT 60
           MA+ S+ +++F  + + F S   A E+ VGGKS  WKIP S S S N+WA+ +RF++GD 
Sbjct: 1   MASSSLLVTIFLCISVFFFSSVNANEVTVGGKSGDWKIPPSSSFSFNEWAQKARFKVGDF 60

Query: 61  LVWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQG 120
           +V+ YE GKDSVL+VT+E YE CNT +P+  + DG TKV+L++ GP YF+SG +GHC++G
Sbjct: 61  IVFKYEAGKDSVLQVTREAYEKCNTTSPKASYTDGNTKVKLDQAGPVYFVSGTEGHCQKG 120

Query: 121 QKLIVVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGV 174
           QKL +VV+TPR      SP             P+SGA  L  G   V   +LG+
Sbjct: 121 QKLRLVVITPRNS--AFSPGPSPSEFDGPAVAPTSGAAKLAGGFSVVFGLVLGL 172

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BLAST of CsaV3_2G032510 vs. TAIR10
Match: AT5G25090.1 (early nodulin-like protein 13)

HSP 1 Score: 144.1 bits (362), Expect = 8.6e-35
Identity = 87/183 (47.54%), Postives = 122/183 (66.67%), Query Frame = 0


Query: 1   MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL 60
           MA  ++  + F    L  +   ++EI+VGGK+++WKIPSS S+SLN+WAE+ RFR+GDTL
Sbjct: 1   MAQRTLVATFFLIFFLLTNLVCSKEIIVGGKTSSWKIPSSPSESLNKWAESLRFRVGDTL 60

Query: 61  VWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ 120
           VW Y++ KDSVL+VTK+ Y  CNT NP   + +G TKV+LE+ GP++FISG+K +C +G+
Sbjct: 61  VWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGE 120

Query: 121 KLIVVVVTPRRR-----FIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGVGV 179
           KL +VV++ R       F G SPXXXXXXX       +  +G      L   VG+LG  V
Sbjct: 121 KLHIVVMSSRGGHTGGFFTGSSPXXXXXXXLLGAPTVAPASGG-SASSLTRQVGVLGF-V 180

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BLAST of CsaV3_2G032510 vs. TAIR10
Match: AT5G57920.1 (early nodulin-like protein 10)

HSP 1 Score: 141.0 bits (354), Expect = 7.3e-34
Identity = 61/109 (55.96%), Postives = 84/109 (77.06%), Query Frame = 0


Query: 21  SEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTLVWDYEDGKDSVLKVTKEDYE 80
           SE REILVGGKSN WK P S+ ++LNQW+  +RF+IGD+L+W Y    DSVL+V + DYE
Sbjct: 18  SEGREILVGGKSNTWKAPESRDETLNQWSGRTRFKIGDSLLWKYNAENDSVLQVRQTDYE 77

Query: 81  ACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQKLIVVVVTP 130
            C+   P + ++DG T +EL++ GPFYFISG +GHC++G+KL VVV++P
Sbjct: 78  RCDRSEPIRGYKDGHTNIELKRSGPFYFISGEEGHCQRGEKLRVVVLSP 126

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BLAST of CsaV3_2G032510 vs. TAIR10
Match: AT4G30590.1 (early nodulin-like protein 12)

HSP 1 Score: 139.0 bits (349), Expect = 2.8e-33
Identity = 79/165 (47.88%), Postives = 106/165 (64.24%), Query Frame = 0


Query: 21  SEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTLVWDYEDGKDSVLKVTKEDYE 80
           S  R ILVGG   +WK+P S + +LN WAE +RF++GD +VW Y+   DSVL+VTKEDYE
Sbjct: 23  SNPRVILVGGSVGSWKVPDSPNNTLNHWAENNRFKVGDFIVWKYDMKVDSVLQVTKEDYE 82

Query: 81  ACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQKLIVVVVTPRRRFIG----- 140
           +CNT NP +++ DG TKV L+K GP++FISGA G+C +G+K+ +VV+  R+   G     
Sbjct: 83  SCNTANPLKQYNDGNTKVALDKSGPYFFISGAPGNCAKGEKITLVVLAERKSGGGSSSGD 142

Query: 141 ------ISPXXXXXXXXXXXXXPSSGAGNLKVG----LLAVVVGI 171
                 +SP      XXXXXX   + A  LKV     L AVVVG+
Sbjct: 143 APKVSPVSPTAQTPAXXXXXXAAHNAAVGLKVASGWFLTAVVVGL 187

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BLAST of CsaV3_2G032510 vs. Swiss-Prot
Match: sp|Q9SK27|ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2)

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-38
Identity = 81/171 (47.37%), Postives = 118/171 (69.01%), Query Frame = 0


Query: 1   MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL 60
           MA+ S+ +++F+ + LF S + A E+ VGGKS  WKIP S S S  +WA+ +RF++GD +
Sbjct: 7   MASSSLHVAIFSLIFLF-SLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFI 66

Query: 61  VWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ 120
           V+ YE GKDSVL+VTKE Y +CNT NP   + DG+TKV+L++ GPFYFISGA GHCE+GQ
Sbjct: 67  VFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQ 126

Query: 121 KLIVVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGIL 172
           KL +VV++PR   I  +P             P+  +G++++G   VV+G++
Sbjct: 127 KLSLVVISPRHSVISPAP-SPVEFEDGPALAPAPISGSVRLGGCYVVLGLV 175

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BLAST of CsaV3_2G032510 vs. Swiss-Prot
Match: sp|Q8LC95|ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g25090 PE=2 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 1.6e-33
Identity = 87/183 (47.54%), Postives = 122/183 (66.67%), Query Frame = 0


Query: 1   MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL 60
           MA  ++  + F    L  +   ++EI+VGGK+++WKIPSS S+SLN+WAE+ RFR+GDTL
Sbjct: 1   MAQRTLVATFFLIFFLLTNLVCSKEIIVGGKTSSWKIPSSPSESLNKWAESLRFRVGDTL 60

Query: 61  VWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ 120
           VW Y++ KDSVL+VTK+ Y  CNT NP   + +G TKV+LE+ GP++FISG+K +C +G+
Sbjct: 61  VWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGE 120

Query: 121 KLIVVVVTPRRR-----FIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGVGV 179
           KL +VV++ R       F G SPXXXXXXX       +  +G      L   VG+LG  V
Sbjct: 121 KLHIVVMSSRGGHTGGFFTGSSPXXXXXXXLLGAPTVAPASGG-SASSLTRQVGVLGF-V 180

[Close]

BLAST of CsaV3_2G032510 vs. Swiss-Prot
Match: sp|Q9T076|ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 9.4e-23
Identity = 58/127 (45.67%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 4   FSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTLVWD 63
           F+I LSL T      + S AR+  VGG S AW   ++  ++   W+  +RF + DTL + 
Sbjct: 13  FTILLSLST----LFTISNARKFNVGG-SGAW--VTNPPENYESWSGKNRFLVHDTLYFS 72

Query: 64  YEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQKLI 123
           Y  G DSVL+V K DY+ACNT+NP +R +DG +++ L++ GPFYFISG + +C++GQKL 
Sbjct: 73  YAKGADSVLEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLN 132

Query: 124 VVVVTPR 131
           VVV++ R
Sbjct: 133 VVVISAR 132

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BLAST of CsaV3_2G032510 vs. Swiss-Prot
Match: sp|Q02917|NO552_SOYBN (Early nodulin-55-2 OS=Glycine max OX=3847 GN=ENOD55-2 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 6.1e-22
Identity = 54/116 (46.55%), Postives = 73/116 (62.93%), Query Frame = 0


Query: 14  LLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTLVWDYEDGKDSVLK 73
           + L IS SEA + +VGG   +WK P S+  SL+ WA + RF+IGDTL++ YE   +SV +
Sbjct: 17  MCLLISTSEAEKYVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIFKYEKRTESVHE 76

Query: 74  VTKEDYEACNTENPEQ-RFEDGKTKVELEKPGPFYFISGAKGHCEQGQKLIVVVVT 129
             + DYE CNT       F  G TKV L KPG  +FISG + HC+ G KL V+V++
Sbjct: 77  GNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLVIS 132

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BLAST of CsaV3_2G032510 vs. Swiss-Prot
Match: sp|P93328|NO16_MEDTR (Early nodulin-16 OS=Medicago truncatula OX=3880 GN=ENOD16 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.0e-20
Identity = 51/127 (40.16%), Postives = 77/127 (60.63%), Query Frame = 0


Query: 1   MANFSIALSLFTF-LLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDT 60
           MA+ S  L +  F + L IS SE+ + L+G   N+WK+P    ++  +WA    F +GDT
Sbjct: 1   MASSSPILLMIIFSMWLLISHSESTDYLIGDSHNSWKVPLPSRRAFARWASAHEFTVGDT 60

Query: 61  LVWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQG 120
           ++++Y++  +SV +V + DY  C+T        DG TKV L+K G ++FISG K HC+ G
Sbjct: 61  ILFEYDNETESVHEVNEHDYIMCHTNGEHVEHHDGNTKVVLDKIGVYHFISGTKRHCKMG 120

Query: 121 QKLIVVV 127
            KL VVV
Sbjct: 121 LKLAVVV 127

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BLAST of CsaV3_2G032510 vs. TrEMBL
Match: tr|A0A0A0LQG0|A0A0A0LQG0_CUCSA (Phytocyanin-like arabinogalactan-protein OS=Cucumis sativus OX=3659 GN=Csa_2G382700 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 9.3e-84
Identity = 178/178 (100.00%), Postives = 178/178 (100.00%), Query Frame = 0


Query: 1   MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL 60
           MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL
Sbjct: 1   MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL 60

Query: 61  VWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ 120
           VWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ
Sbjct: 61  VWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ 120

Query: 121 KLIVVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGVGVGLV 179
           KLIVVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGVGVGLV
Sbjct: 121 KLIVVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGVGVGLV 178

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BLAST of CsaV3_2G032510 vs. TrEMBL
Match: tr|A0A1S3BBT8|A0A1S3BBT8_CUCME (early nodulin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103488354 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 2.2e-77
Identity = 156/178 (87.64%), Postives = 158/178 (88.76%), Query Frame = 0


Query: 1   MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL 60
           MANFSIAL LFTFLL   SFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL
Sbjct: 1   MANFSIALFLFTFLL--FSFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL 60

Query: 61  VWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ 120
           VW YE+GKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ
Sbjct: 61  VWTYEEGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ 120

Query: 121 KLIVVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGVGVGLV 179
           KLIVVV+TPRRRFIGISP             PSSGA NLKVG LAVVVGILGVGVGLV
Sbjct: 121 KLIVVVLTPRRRFIGISPAPSPAESEGPAVAPSSGAANLKVGFLAVVVGILGVGVGLV 176

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BLAST of CsaV3_2G032510 vs. TrEMBL
Match: tr|A0A2N9H5Y9|A0A2N9H5Y9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37748 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 3.3e-49
Identity = 103/175 (58.86%), Postives = 133/175 (76.00%), Query Frame = 0


Query: 1   MANFSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTL 60
           MA +S A+S F  LL  +S+SEAREI+VGGK++AWKIPSSQS SLNQWAE SRF IGD+L
Sbjct: 1   MAGYSRAISAFV-LLFVLSYSEAREIMVGGKTDAWKIPSSQSDSLNQWAEGSRFLIGDSL 60

Query: 61  VWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQ 120
           VW Y+ GKDSVL+V KE+Y +CNT NP + ++DG TKV+L++ GPFYFISG+KGHCE+GQ
Sbjct: 61  VWKYDSGKDSVLQVNKENYVSCNTSNPIEEYKDGNTKVKLDRSGPFYFISGSKGHCEKGQ 120

Query: 121 KLIVVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGVGV 176
           KL+VVV++PR R+ GISP             P+S A  L+ GL+ V +GI  +G+
Sbjct: 121 KLVVVVLSPRHRYTGISPAPSPVEFDGPAVAPTSSATKLQSGLM-VALGIFALGL 173

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BLAST of CsaV3_2G032510 vs. TrEMBL
Match: tr|A7J385|A7J385_GOSHI (Phytocyanin-like arabinogalactan-protein OS=Gossypium hirsutum OX=3635 GN=PLA1 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 9.7e-49
Identity = 97/170 (57.06%), Postives = 130/170 (76.47%), Query Frame = 0


Query: 4   FSIALSLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDTLVWD 63
           FS +++    L +F+SF++ +EI+VGGK+ AWKIPSS+S SLN+WAE +RF+IGD+LVW 
Sbjct: 6   FSRSITPLVLLFIFLSFAQGKEIMVGGKTGAWKIPSSESDSLNKWAEKARFQIGDSLVWK 65

Query: 64  YEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQGQKLI 123
           Y+ GKDSVL+V+KEDY +CNT NP   ++DG TKV+LEK GP++F+SGAKGHCEQGQK+I
Sbjct: 66  YDGGKDSVLQVSKEDYTSCNTSNPIAEYKDGNTKVKLEKSGPYFFMSGAKGHCEQGQKMI 125

Query: 124 VVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGV 174
           VVV++ + R+IGISP             P+SG   LK GLL V VG+LG+
Sbjct: 126 VVVMSQKHRYIGISPAPSPVDFEGPAVAPTSGVAGLKAGLL-VTVGVLGL 174

[Close]

BLAST of CsaV3_2G032510 vs. TrEMBL
Match: tr|A0A061GJI7|A0A061GJI7_THECC (Early nodulin-like protein 11 OS=Theobroma cacao OX=3641 GN=TCM_036902 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 9.7e-49
Identity = 104/176 (59.09%), Postives = 129/176 (73.30%), Query Frame = 0


Query: 1   MANFSIAL-SLFTFLLLFISFSEAREILVGGKSNAWKIPSSQSQSLNQWAETSRFRIGDT 60
           MA F+  L S    L LF+++ EA+EILVGGK++AWKIPSS+S SLN+WAE SRFRIGD+
Sbjct: 177 MAAFARTLTSSLLLLFLFLNYIEAKEILVGGKTDAWKIPSSESDSLNKWAENSRFRIGDS 236

Query: 61  LVWDYEDGKDSVLKVTKEDYEACNTENPEQRFEDGKTKVELEKPGPFYFISGAKGHCEQG 120
           L W Y+  KDSVL+VTKEDY +CNT NP   ++DG TKV+LEK GPFYFISGAKGHCEQG
Sbjct: 237 LAWKYDGSKDSVLQVTKEDYASCNTSNPTAEYKDGNTKVKLEKSGPFYFISGAKGHCEQG 296

Query: 121 QKLIVVVVTPRRRFIGISPXXXXXXXXXXXXXPSSGAGNLKVGLLAVVVGILGVGV 176
           QKL+VVV++ R R+ GISP             P+S A  LK G L V +G+L +G+
Sbjct: 297 QKLVVVVLSSRHRYTGISPAPSPAEIEGPAIAPTSNAAGLKAGFL-VTLGVLVLGL 351

The following BLAST results are available for this feature:

BLAST of CsaV3_2G032510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138700.1	1.4e-83	100.00	PREDICTED: early nodulin-like protein 1 [Cucumis sativus] >KGN62997.1 Phytocyani...	[more]
XP_008445271.1	3.4e-77	87.64	PREDICTED: early nodulin-like protein 1 [Cucumis melo]	[more]
XP_022996782.1	2.7e-66	75.28	early nodulin-like protein 1 [Cucurbita maxima]	[more]
XP_022962176.1	5.0e-65	74.16	early nodulin-like protein 1 [Cucurbita moschata]	[more]
XP_023546732.1	6.6e-65	74.16	early nodulin-like protein 1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_2G032510 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G25060.1	8.9e-40	47.37	early nodulin-like protein 14	[more]
AT4G31840.1	1.4e-37	45.98	early nodulin-like protein 15	[more]
AT5G25090.1	8.6e-35	47.54	early nodulin-like protein 13	[more]
AT5G57920.1	7.3e-34	55.96	early nodulin-like protein 10	[more]
AT4G30590.1	2.8e-33	47.88	early nodulin-like protein 12	[more]

BLAST of CsaV3_2G032510 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SK27\|ENL1_ARATH	1.6e-38	47.37	Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 S...	[more]
sp\|Q8LC95\|ENL3_ARATH	1.6e-33	47.54	Early nodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g25090 PE=2 S...	[more]
sp\|Q9T076\|ENL2_ARATH	9.4e-23	45.67	Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 S...	[more]
sp\|Q02917\|NO552_SOYBN	6.1e-22	46.55	Early nodulin-55-2 OS=Glycine max OX=3847 GN=ENOD55-2 PE=2 SV=1	[more]
sp\|P93328\|NO16_MEDTR	2.0e-20	40.16	Early nodulin-16 OS=Medicago truncatula OX=3880 GN=ENOD16 PE=3 SV=1	[more]

BLAST of CsaV3_2G032510 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LQG0\|A0A0A0LQG0_CUCSA	9.3e-84	100.00	Phytocyanin-like arabinogalactan-protein OS=Cucumis sativus OX=3659 GN=Csa_2G382...	[more]
tr\|A0A1S3BBT8\|A0A1S3BBT8_CUCME	2.2e-77	87.64	early nodulin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103488354 PE=4 SV=1	[more]
tr\|A0A2N9H5Y9\|A0A2N9H5Y9_FAGSY	3.3e-49	58.86	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37748 PE=4 SV=1	[more]
tr\|A7J385\|A7J385_GOSHI	9.7e-49	57.06	Phytocyanin-like arabinogalactan-protein OS=Gossypium hirsutum OX=3635 GN=PLA1 P...	[more]
tr\|A0A061GJI7\|A0A061GJI7_THECC	9.7e-49	59.09	Early nodulin-like protein 11 OS=Theobroma cacao OX=3641 GN=TCM_036902 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR039391	Phytocyanin
IPR008972	Cupredoxin
IPR003245	Phytocyanin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0022900	electron transport chain
biological_process	GO:0010262	somatic embryogenesis
biological_process	GO:0007049	cell cycle
biological_process	GO:0045747	positive regulation of Notch signaling pathway
biological_process	GO:0006221	pyrimidine nucleotide biosynthetic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G032510.1	CsaV3_2G032510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 35..120 e-value: 4.6E-27 score: 93.8
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 61..126 e-value: 8.0E-21 score: 245.0
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 24..128 score: 38.26
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 24..138 e-value: 3.2E-36 score: 125.4
IPR008972	Cupredoxin	SUPERFAMILY	SSF49503	Cupredoxins	coord: 23..127
None	No IPR available	PANTHER	PTHR33021:SF8	EARLY NODULIN-LIKE PROTEIN 1-RELATED	coord: 6..175
None	No IPR available	CDD	cd11019	OsENODL1_like	coord: 24..126 e-value: 1.60048E-57 score: 177.075
IPR039391	Phytocyanin	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 6..175

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G032510	CSPI02G23950	Wild cucumber (PI 183967)	cpicucB081
CsaV3_2G032510	Cucsa.162850	Cucumber (Gy14) v1	cgycucB247
CsaV3_2G032510	CmaCh12G003660	Cucurbita maxima (Rimu)	cmacucB0192
CsaV3_2G032510	CmaCh05G003470	Cucurbita maxima (Rimu)	cmacucB0935
CsaV3_2G032510	CmoCh05G003510	Cucurbita moschata (Rifu)	cmocucB0925
CsaV3_2G032510	CmoCh12G003190	Cucurbita moschata (Rifu)	cmocucB0176
CsaV3_2G032510	Cp4.1LG07g03160	Cucurbita pepo (Zucchini)	cpecucB1004
CsaV3_2G032510	CsGy2G023720	Cucumber (Gy14) v2	cgybcucB065
CsaV3_2G032510	Carg09366	Silver-seed gourd	carcucB0159
CsaV3_2G032510	Carg03956	Silver-seed gourd	carcucB1015
CsaV3_2G032510	Cla022365	Watermelon (97103) v1	cucwmB121
CsaV3_2G032510	MELO3C011302	Melon (DHL92) v3.5.1	cucmeB124
CsaV3_2G032510	ClCG08G013730	Watermelon (Charleston Gray)	cucwcgB173
CsaV3_2G032510	Lsi08G012510	Bottle gourd (USVL1VR-Ls)	cuclsiB152
CsaV3_2G032510	MELO3C011302.2	Melon (DHL92) v3.6.1	cucmedB118
CsaV3_2G032510	Cla97C08G157170	Watermelon (97103) v2	cucwmbB160
CsaV3_2G032510	Bhi04G000046	Wax gourd	cucwgoB163

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G032510	Wax gourd	cucwgoB205
CsaV3_2G032510	Cucumber (Chinese Long) v3	cuccucB082
CsaV3_2G032510	Silver-seed gourd	carcucB0665
CsaV3_2G032510	Cucumber (Gy14) v2	cgybcucB168
CsaV3_2G032510	Cucumber (Gy14) v1	cgycucB414
CsaV3_2G032510	Cucurbita maxima (Rimu)	cmacucB0016
CsaV3_2G032510	Cucurbita moschata (Rifu)	cmocucB0006
CsaV3_2G032510	Cucurbita pepo (Zucchini)	cpecucB0116
CsaV3_2G032510	Cucurbita pepo (Zucchini)	cpecucB0958
CsaV3_2G032510	Wild cucumber (PI 183967)	cpicucB207
CsaV3_2G032510	Melon (DHL92) v3.5.1	cucmeB151
CsaV3_2G032510	Watermelon (Charleston Gray)	cucwcgB151
CsaV3_2G032510	Watermelon (97103) v1	cucwmB139