CsaV3_2G032430 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G032430
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionCCR4-NOT transcription complex subunit 7
Locationchr2 : 21378051 .. 21380068 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTAAAATAGAAGAAAAGAAAAAAGAAAAAGGAGGGGACGCCAAAATTGAACAAAATGGGAAAGAAAAGCGACTTGGAAAGCAAGAAGGGGGGAAACGGCGTCGTATAAACCATAAGTAGTGGATGTGGATCCACATTGAAACGACGTCGGATTTGAAAGTGTAAACATCACTTTCCCCGTCGTCTACCAGGGCGTTGAGCAACGTTTTAGGGAGAGGGTGAGCATTAGGCAAACTCTCTCTCTCTCTCTCTCTCTCTCGCTCTATCAAACCCTGTTTTCTCTCTGCCGCTCCTCCTCCTCCTCCTCCTCCTCCGCCGCCGTTGACCTCCTTCTACAACTCCCTTCTTCTAGATCTGCCCTTCCCATCTTTCAATTTCACATTTTCAAGGTCAGATCTACTTACCCACTCCCTATTTCTTTTACATCACTTCATTTCTAGGGTTCCACTTAACCCCCTCCTTCTCTTTCAGATCTGTAACCACTTCTTTACTTCCCTTACTCTGGCGTTGGTTTTCCCACGCCCCCGCTTGCTTCTTTTTATATCCCCGTATCTGTTCGCCATATTTTCTTTAACTCTTCGTCGATTTCTCACTCTTATCGAGTTGACCTTGGAGGAATGTCGATTTTACCCAAAGGTGATTCGATTCAAATCCGGGAAGTCTGGAATGCTAATTTGGAAGAGGAGTTTGCGTTAATCCGTGCGATTGTTGATAAATTTAATTACATAGCTATGGATACTGAGTTCCCTGGGGTTGTACTTCGCCCTTTGGGTACTTTCAAGAATATCAATGATTTCAACTACCGGACTCTTAAGGATAATGTTGAGATGTTGAAGTTGATTCAGTTGGGTCTTACTTTCTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACTGATAAGTTTTGCATTTGGCAGTTCAATTTTCGTGAGTTCAATATTGGTAGTGATATTTTTGCTAGTGATTCCATTGAGCTTCTTCGTCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTTAATCGTTTTGGTGAGCTTCTTATGTCTTCTGGGGTTGTGTTAAACGATGATGTGAACTGGGTCACGTTTCACAGTGGGTACGATTTTGGTTACTTACTGAAATTACTGACTTGCCGTGGCTTACCCAATGATCAGGCGGGTTTCTTTGAGTTGATCAATGTCTACTTTCCAGTGCTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCACGGTGGGTTGAACAAGCTTGCTGAATTATTAGAAGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACCTTTTTCAATGGGTCTATACAGAAATACGCAGGTGTTTTGTATGGCCTTGGTGTTGAAAATGGACAGCGTACTAATTGAAGAGAATTACAAAGTGTTTGTAGAAGTGTGAGACATTTAGTTACTTCTGTACAATTTGGCTAAAGCATTGATGATGATTGTAACCGTTTTCAGCTTTCCTGCTCTGTAATAGAAACCTCCGACTGTTTTTTGCAGCTTAGTGGTTTCTTGTAAATTATGTCAGCTAGTGTTTCAATAAGAATTTTATTGACGTTTTTTAGAATGAGTTTCCACTTCTTTTGTGAACTTATATGTTGTTACTAATTCCTTTAGGTTCGTTAATCATGTAAGGCCCTAAAGGTATTTGATATGATACACAATGTTGCCAATAGAACTTATTTCTTTAACAACCGGTTATGTGAATTCTCAGGTCTTTCATTTGTTTTCTTCTTTCCTAATGATGTGACTCTTTAGCTTTGTTGTCATCGATGCCATTACGGTGGACACGGACAATAGTTGGATTGGATTGGAATCTGATAAAGACCATCAGCCTGTCTCAATTCTTATAGTTAAATTGGTTTTCTGTCATATTGGACACTTTTTTGTTCTTAGTAGTTGTTTATATCTGATGGTTCTGCAAGGTCATCTGTATACTTC

mRNA sequence

ATGTCGATTTTACCCAAAGGTGATTCGATTCAAATCCGGGAAGTCTGGAATGCTAATTTGGAAGAGGAGTTTGCGTTAATCCGTGCGATTGTTGATAAATTTAATTACATAGCTATGGATACTGAGTTCCCTGGGGTTGTACTTCGCCCTTTGGGTACTTTCAAGAATATCAATGATTTCAACTACCGGACTCTTAAGGATAATGTTGAGATGTTGAAGTTGATTCAGTTGGGTCTTACTTTCTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACTGATAAGTTTTGCATTTGGCAGTTCAATTTTCGTGAGTTCAATATTGGTAGTGATATTTTTGCTAGTGATTCCATTGAGCTTCTTCGTCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTTAATCGTTTTGGTGAGCTTCTTATGTCTTCTGGGGTTGTGTTAAACGATGATGTGAACTGGGTCACGTTTCACAGTGGGTACGATTTTGGTTACTTACTGAAATTACTGACTTGCCGTGGCTTACCCAATGATCAGGCGGGTTTCTTTGAGTTGATCAATGTCTACTTTCCAGTGCTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCACGGTGGGTTGAACAAGCTTGCTGAATTATTAGAAGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACCTTTTTCAATGGGTCTATACAGAAATACGCAGGTGTTTTGTATGGCCTTGGTGTTGAAAATGGACAGCGTACTAATTGA

Coding sequence (CDS)

ATGTCGATTTTACCCAAAGGTGATTCGATTCAAATCCGGGAAGTCTGGAATGCTAATTTGGAAGAGGAGTTTGCGTTAATCCGTGCGATTGTTGATAAATTTAATTACATAGCTATGGATACTGAGTTCCCTGGGGTTGTACTTCGCCCTTTGGGTACTTTCAAGAATATCAATGATTTCAACTACCGGACTCTTAAGGATAATGTTGAGATGTTGAAGTTGATTCAGTTGGGTCTTACTTTCTCTGATGAGGATGGGAATCTCCCAACTTGTGGAACTGATAAGTTTTGCATTTGGCAGTTCAATTTTCGTGAGTTCAATATTGGTAGTGATATTTTTGCTAGTGATTCCATTGAGCTTCTTCGTCAGTGTGGTATTGATTTTCAGAAGAACAATGAAGAGGGTATCGATGTTAATCGTTTTGGTGAGCTTCTTATGTCTTCTGGGGTTGTGTTAAACGATGATGTGAACTGGGTCACGTTTCACAGTGGGTACGATTTTGGTTACTTACTGAAATTACTGACTTGCCGTGGCTTACCCAATGATCAGGCGGGTTTCTTTGAGTTGATCAATGTCTACTTTCCAGTGCTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCACGGTGGGTTGAACAAGCTTGCTGAATTATTAGAAGTTGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACCTTTTTCAATGGGTCTATACAGAAATACGCAGGTGTTTTGTATGGCCTTGGTGTTGAAAATGGACAGCGTACTAATTGA

Protein sequence

MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Homology
[Close]
BLAST of CsaV3_2G032430 vs. NCBI nr
Match: XP_004138704.1 (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis sativus] >KGN62988.1 hypothetical protein Csa_2G382610 [Cucumis sativus])

HSP 1 Score: 575.5 bits (1482), Expect = 9.8e-161
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]
BLAST of CsaV3_2G032430 vs. NCBI nr
Match: XP_008445259.1 (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis melo])

HSP 1 Score: 574.3 bits (1479), Expect = 2.2e-160
Identity = 273/274 (99.64%), Postives = 274/274 (100.00%), Query Frame = 0 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPV+YDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]
BLAST of CsaV3_2G032430 vs. NCBI nr
Match: XP_022996818.1 (probable CCR4-associated factor 1 homolog 7 [Cucurbita maxima] >XP_022996819.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita maxima])

HSP 1 Score: 541.6 bits (1394), Expect = 1.6e-150
Identity = 257/274 (93.80%), Postives = 264/274 (96.35%), Query Frame = 0 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWN NLEEEFALIR IVDKFNYIAMDTEFPGVVLRPLG FKNIND+
Sbjct: 1   MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSDE+GN PTCGTD FCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNFPTCGTDNFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
             Q GFF+LINVYFPV+YDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 EKQDGFFDLINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
            TFRKLR+TFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 STFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]
BLAST of CsaV3_2G032430 vs. NCBI nr
Match: XP_022962201.1 (probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata] >XP_022962202.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata] >XP_023545657.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita pepo subsp. pepo] >XP_023545658.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 539.7 bits (1389), Expect = 6.0e-150
Identity = 257/274 (93.80%), Postives = 264/274 (96.35%), Query Frame = 0 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWN NLEEEFALIR IVDKFNYIAMDTEFPGVVLRPLG FKNIND+
Sbjct: 1   MSILPKGDSIQIREVWNDNLEEEFALIREIVDKFNYIAMDTEFPGVVLRPLGAFKNINDY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTD FCIWQFNFREFNI SDIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDSFCIWQFNFREFNIVSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNADVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
             Q GFF+LINVYFPV+YDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 EKQDGFFDLINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
            TFRKLR+TFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 STFRKLRNTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]
BLAST of CsaV3_2G032430 vs. NCBI nr
Match: XP_022132308.1 (probable CCR4-associated factor 1 homolog 7 [Momordica charantia])

HSP 1 Score: 535.4 bits (1378), Expect = 1.1e-148
Identity = 250/274 (91.24%), Postives = 265/274 (96.72%), Query Frame = 0 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWN NLEEEFALIR IVD+FNYIAMDTEFPGVVLRP+G FKNIND+
Sbjct: 1   MSILPKGDSIQIREVWNDNLEEEFALIREIVDEFNYIAMDTEFPGVVLRPVGAFKNINDY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFN+  DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNVSEDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLND VNWVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRTLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + QAGFF+LIN+YFP++YDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINIYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGS +KYAGVLYGLGVE+GQRTN
Sbjct: 241 CTFRKLRDTFFNGSTKKYAGVLYGLGVESGQRTN 274

[Close]
BLAST of CsaV3_2G032430 vs. TAIR10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 448.7 bits (1153), Expect = 2.5e-126
Identity = 207/272 (76.10%), Postives = 240/272 (88.24%), Query Frame = 0 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NLE E ALIR +VD F ++AMDTEFPG+V RP+GTFK   ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTD-KFCIWQFNFREFNIGSDIFASDSIE 120
           +Y TLK NV +LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++ SDI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGL 180
           LLRQ GIDF KNNE GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P  Q GFFE+I+VYFP +YDIKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ 272
           +CTFRKL++ FF GS++KY+GVLYGLGVENGQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]
BLAST of CsaV3_2G032430 vs. TAIR10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 442.6 bits (1137), Expect = 1.8e-124
Identity = 202/269 (75.09%), Postives = 235/269 (87.36%), Query Frame = 0 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NL+EE  LIR +VD F Y+AMDTEFPG+V+RP+GTFK+  D+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           +Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ SDIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + Q  FF+LINVYFP +YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVEN 270
           CTFRKL++ FF G + KY+GVLYGLGVEN
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVEN 269

[Close]
BLAST of CsaV3_2G032430 vs. TAIR10
Match: AT5G10960.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 442.2 bits (1136), Expect = 2.3e-124
Identity = 204/268 (76.12%), Postives = 236/268 (88.06%), Query Frame = 0 

Query: 6   KGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTL 65
           K DSI IREVW+ NL EEFALIR IVDKF+YIAMDTEFPGVVL+P+ TFK  ND NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELLRQCG 125
           K+NV++LKLIQ+GLTFSDE+GNLPTCGTDKFCIWQFNFREFNIG DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAG 185
           IDF+KN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF+L+ VYFP +YDIKHLM FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSIQKYAGVLYGLGVENGQRT 274
           L++ +F GS +KY GVLYGLGVE+G  T
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]
BLAST of CsaV3_2G032430 vs. TAIR10
Match: AT1G15920.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-90
Identity = 158/264 (59.85%), Postives = 195/264 (73.86%), Query Frame = 0 

Query: 8   DSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPL------GTFKNINDFN 67
           D+I+IREVWN NLE+E ALI   +D F Y+AMDTEFPG+V + +                
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVXXXXXXXXXXXXXXXX 71

Query: 68  YRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELL 127
                    MLKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN+ SD+FA DSIELL
Sbjct: 72  XXXXXXXXXMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPN 187
           R+  ID +KNNE G+D  RF ELLM SGVVLND ++WVTFH GYDFGYLLKLL+ + LP 
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 DQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTAC 247
           + + FF+ +  +FPV+YDIK+LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFNGSIQKYAGVLYGL 266
           TF K+++ FF GS+ KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]
BLAST of CsaV3_2G032430 vs. TAIR10
Match: AT3G44260.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 279.6 bits (714), Expect = 2.0e-75
Identity = 143/269 (53.16%), Postives = 188/269 (69.89%), Query Frame = 0 

Query: 5   PKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRT 64
           P G ++  REVW  NLE EF LI  I+D + +I+MDTEFPGV+ +    F N +D  Y  
Sbjct: 12  PDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFKSDLRFTNPDDL-YTL 71

Query: 65  LKDNVEMLKLIQLGLTFSDEDGNLPTCGTD--KFCIWQFNFREFNIGSDIFASDSIELLR 124
           LK NV+ L LIQ+GLT SD +GNLP  G D  +  IW+FNFR+F++  D  A DSIELLR
Sbjct: 72  LKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLR 131

Query: 125 QCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPND 184
           + GIDF++N  +G++  RF EL+MSSG+V N++V+WVTFHS YDFGYL+K+LT R LP  
Sbjct: 132 RQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGA 191

Query: 185 QAGFFELINVYF-PVLYDIKHLMKFC-NSLHGGLNKLAELLEVER-IGVCHQAGSDSLLT 244
              F  ++ V F   +YD+KH+MKFC   L GGL+++A  LEV R +G CHQAGSDSLLT
Sbjct: 192 LGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLT 251

Query: 245 ACTFRKLRDTFF-NGSIQKYAGVLYGLGV 268
              F+++RD +F     +K+AGVLYGL V
Sbjct: 252 WHAFQRMRDLYFVQDGPEKHAGVLYGLEV 279

[Close]
BLAST of CsaV3_2G032430 vs. Swiss-Prot
Match: sp|Q9SKZ2|CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 448.7 bits (1153), Expect = 4.5e-125
Identity = 207/272 (76.10%), Postives = 240/272 (88.24%), Query Frame = 0 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NLE E ALIR +VD F ++AMDTEFPG+V RP+GTFK   ++
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTD-KFCIWQFNFREFNIGSDIFASDSIE 120
           +Y TLK NV +LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++ SDI+A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGL 180
           LLRQ GIDF KNNE GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P  Q GFFE+I+VYFP +YDIKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ 272
           +CTFRKL++ FF GS++KY+GVLYGLGVENGQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]
BLAST of CsaV3_2G032430 vs. Swiss-Prot
Match: sp|Q9SAI2|CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=2 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 1.7e-124
Identity = 204/271 (75.28%), Postives = 237/271 (87.45%), Query Frame = 0 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MS+  K DSIQIREVWN NL+EE  LIR +VD F Y+AMDTEFPG+V+RP+GTFK+  D+
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           +Y TLK NV +LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++ SDIFA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN++V+WVTFHSGYDFGYLLKLLTC+ LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + Q  FF+LINVYFP +YDIKHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQ 272
           CTFRKL++ FF G + KY+GVLYGLGVENGQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]
BLAST of CsaV3_2G032430 vs. Swiss-Prot
Match: sp|Q9LEU4|CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 4.2e-123
Identity = 204/268 (76.12%), Postives = 236/268 (88.06%), Query Frame = 0 

Query: 6   KGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTL 65
           K DSI IREVW+ NL EEFALIR IVDKF+YIAMDTEFPGVVL+P+ TFK  ND NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELLRQCG 125
           K+NV++LKLIQ+GLTFSDE+GNLPTCGTDKFCIWQFNFREFNIG DI+AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAG 185
           IDF+KN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF+L+ VYFP +YDIKHLM FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSIQKYAGVLYGLGVENGQRT 274
           L++ +F GS +KY GVLYGLGVE+G  T
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]
BLAST of CsaV3_2G032430 vs. Swiss-Prot
Match: sp|Q9S9P2|CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.8e-89
Identity = 158/264 (59.85%), Postives = 195/264 (73.86%), Query Frame = 0 

Query: 8   DSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPL------GTFKNINDFN 67
           D+I+IREVWN NLE+E ALI   +D F Y+AMDTEFPG+V + +                
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVXXXXXXXXXXXXXXXX 71

Query: 68  YRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELL 127
                    MLKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN+ SD+FA DSIELL
Sbjct: 72  XXXXXXXXXMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPN 187
           R+  ID +KNNE G+D  RF ELLM SGVVLND ++WVTFH GYDFGYLLKLL+ + LP 
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 DQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTAC 247
           + + FF+ +  +FPV+YDIK+LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFNGSIQKYAGVLYGL 266
           TF K+++ FF GS+ KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]
BLAST of CsaV3_2G032430 vs. Swiss-Prot
Match: sp|Q3ZC01|CNOT7_BOVIN (CCR4-NOT transcription complex subunit 7 OS=Bos taurus OX=9913 GN=CNOT7 PE=2 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 8.9e-81
Identity = 149/269 (55.39%), Postives = 194/269 (72.12%), Query Frame = 0 

Query: 9   SIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDFNYRTLKDN 68
           S +I EVW  NL+EE   IR ++ K+NY+AMDTEFPGVV RP+G F++  D+ Y+ L+ N
Sbjct: 9   SQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCN 68

Query: 69  VEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIELLRQCGIDF 128
           V++LK+IQLGLTF +E G  P  GT     WQFNF+ FN+  D++A DSIELL   GI F
Sbjct: 69  VDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTTSGIQF 128

Query: 129 QKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLPNDQAGFFE 188
           +K+ EEGI+   F ELLM+SGVVL + V W++FHSGYDFGYL+K+LT   LP ++  FFE
Sbjct: 129 KKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFE 188

Query: 189 LINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRD 248
           ++ ++FPV+YD+K+LMK C +L GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R+
Sbjct: 189 ILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMRE 248

Query: 249 TFFNGSIQ--KYAGVLYGLG-----VENG 271
            FF   I   KY G LYGLG     V+NG
Sbjct: 249 MFFEDHIDDAKYCGHLYGLGSGSSYVQNG 272

[Close]
BLAST of CsaV3_2G032430 vs. TrEMBL
Match: tr|A0A0A0LMH2|A0A0A0LMH2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382610 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 6.5e-161
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]
BLAST of CsaV3_2G032430 vs. TrEMBL
Match: tr|A0A1S3BD45|A0A1S3BD45_CUCME (probable CCR4-associated factor 1 homolog 7 OS=Cucumis melo OX=3656 GN=LOC103488344 PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 1.4e-160
Identity = 273/274 (99.64%), Postives = 274/274 (100.00%), Query Frame = 0 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           NDQAGFFELINVYFPV+YDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]
BLAST of CsaV3_2G032430 vs. TrEMBL
Match: tr|W9QRX8|W9QRX8_9ROSA (Putative CCR4-associated factor 1-7-like protein OS=Morus notabilis OX=981085 GN=L484_014468 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 8.5e-145
Identity = 244/276 (88.41%), Postives = 263/276 (95.29%), Query Frame = 0 

Query: 1   MSILPK--GDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIN 60
           MSIL K  GDSIQIREVWN NLEEEFALIR IVDK+NY+AMDTEFPGVVLRP+G FKNIN
Sbjct: 1   MSILTKGDGDSIQIREVWNDNLEEEFALIREIVDKYNYVAMDTEFPGVVLRPVGNFKNIN 60

Query: 61  DFNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSI 120
           D+NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFNI  DIFASDSI
Sbjct: 61  DYNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSI 120

Query: 121 ELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRG 180
           ELLRQCGIDF+KNNE+GIDVNRFGELLMSSG+VLND V+WVTFHSGYDFGYLLKLLTC+ 
Sbjct: 121 ELLRQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCQS 180

Query: 181 LPNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLL 240
           LP+ QAGFF+LINVYFP++YDIKHLMKFCNSLHGGLNKLAELLEVER+GVCHQAGSDSLL
Sbjct: 181 LPDTQAGFFDLINVYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLL 240

Query: 241 TACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           T+CTFRKLRDTFFNGS +KYAGVLYGLGVENGQ TN
Sbjct: 241 TSCTFRKLRDTFFNGSTEKYAGVLYGLGVENGQTTN 276

[Close]
BLAST of CsaV3_2G032430 vs. TrEMBL
Match: tr|A0A2N9GHJ9|A0A2N9GHJ9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26772 PE=4 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 1.1e-144
Identity = 240/274 (87.59%), Postives = 262/274 (95.62%), Query Frame = 0 

Query: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60
           MSILPKGDSIQIREVWN NLEEEFALIR IVD +N+IAMDTEFPGVVLRP+GTF+NIND+
Sbjct: 1   MSILPKGDSIQIREVWNDNLEEEFALIREIVDGYNFIAMDTEFPGVVLRPVGTFQNINDY 60

Query: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSD +GNLPTCGTDKFC+WQFNFREFN+  DIFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDGNGNLPTCGTDKFCVWQFNFREFNVSDDIFASDSIEL 120

Query: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180
           L QCGIDF+KNNE+GIDVNRFGELLMSSG+VLND V+WVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LHQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 NDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           + QAGFF+LIN+YFP++YDIKHLMKFCNSLHGGLNKLAELL+VER+GVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINMYFPMVYDIKHLMKFCNSLHGGLNKLAELLDVERVGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGS +KYAGVLYGLGVENGQ TN
Sbjct: 241 CTFRKLRDTFFNGSTEKYAGVLYGLGVENGQSTN 274

[Close]
BLAST of CsaV3_2G032430 vs. TrEMBL
Match: tr|A0A067KMK9|A0A067KMK9_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_07101 PE=4 SV=1)

HSP 1 Score: 521.5 bits (1342), Expect = 1.1e-144
Identity = 244/275 (88.73%), Postives = 261/275 (94.91%), Query Frame = 0 

Query: 1   MSILPKG-DSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNIND 60
           MSI+PK  DSIQIREVWN NLEEEFALIR IVD+FNY+AMDTEFPGVVLRP+G FKNIND
Sbjct: 1   MSIIPKNDDSIQIREVWNDNLEEEFALIREIVDQFNYVAMDTEFPGVVLRPVGNFKNIND 60

Query: 61  FNYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIE 120
           +NY+TLKDNV+MLKLIQLGLTFSDE+GNLPTCGTDKFCIWQFNFREFNI  DIFASDSIE
Sbjct: 61  YNYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIE 120

Query: 121 LLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGL 180
           LLRQCGIDF+KNNE+GIDVNRFGELLMSSGVVLND V WVTFHSGYDFGYLLKLLTCR L
Sbjct: 121 LLRQCGIDFKKNNEKGIDVNRFGELLMSSGVVLNDSVYWVTFHSGYDFGYLLKLLTCRSL 180

Query: 181 PNDQAGFFELINVYFPVLYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           P+ QAGFF+LIN+YFPV+YDIKHLMKFCNSLHGGLNKLAELLEVER+GVCHQAGSDSLLT
Sbjct: 181 PDTQAGFFDLINMYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 275
           +CTFRKLRD FFNGS +KYAGVLYGLGVENGQ TN
Sbjct: 241 SCTFRKLRDNFFNGSAEKYAGVLYGLGVENGQNTN 275

The following BLAST results are available for this feature:
BLAST of CsaV3_2G032430 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138704.19.8e-161100.00PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis sativus] >KGN629... [more]
XP_008445259.12.2e-16099.64PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis melo][more]
XP_022996818.11.6e-15093.80probable CCR4-associated factor 1 homolog 7 [Cucurbita maxima] >XP_022996819.1 p... [more]
XP_022962201.16.0e-15093.80probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata] >XP_022962202.1... [more]
XP_022132308.11.1e-14891.24probable CCR4-associated factor 1 homolog 7 [Momordica charantia][more]
BLAST of CsaV3_2G032430 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G32070.12.5e-12676.10Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G80780.31.8e-12475.09Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT5G10960.12.3e-12476.12Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT1G15920.21.0e-9059.85Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
AT3G44260.12.0e-7553.16Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of CsaV3_2G032430 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SKZ2|CAF1G_ARATH4.5e-12576.10Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
sp|Q9SAI2|CAF1F_ARATH1.7e-12475.28Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
sp|Q9LEU4|CAF1J_ARATH4.2e-12376.12Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=... [more]
sp|Q9S9P2|CAF1B_ARATH1.8e-8959.85Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C... [more]
sp|Q3ZC01|CNOT7_BOVIN8.9e-8155.39CCR4-NOT transcription complex subunit 7 OS=Bos taurus OX=9913 GN=CNOT7 PE=2 SV=... [more]
BLAST of CsaV3_2G032430 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LMH2|A0A0A0LMH2_CUCSA6.5e-161100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382610 PE=4 SV=1[more]
tr|A0A1S3BD45|A0A1S3BD45_CUCME1.4e-16099.64probable CCR4-associated factor 1 homolog 7 OS=Cucumis melo OX=3656 GN=LOC103488... [more]
tr|W9QRX8|W9QRX8_9ROSA8.5e-14588.41Putative CCR4-associated factor 1-7-like protein OS=Morus notabilis OX=981085 GN... [more]
tr|A0A2N9GHJ9|A0A2N9GHJ9_FAGSY1.1e-14487.59Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26772 PE=4 SV=1[more]
tr|A0A067KMK9|A0A067KMK9_JATCU1.1e-14488.73Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_07101 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR036397RNaseH_sf
IPR006941RNase_CAF1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G032430.1CsaV3_2G032430.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 15..136
e-value: 2.3E-10
score: 40.1
coord: 161..243
e-value: 2.6E-6
score: 26.7
IPR036397Ribonuclease H superfamilyGENE3DG3DSA:3.30.420.10coord: 1..269
e-value: 2.2E-111
score: 373.5
NoneNo IPR availablePANTHERPTHR10797CCR4-NOT TRANSCRIPTION COMPLEX SUBUNITcoord: 1..273
NoneNo IPR availablePANTHERPTHR10797:SF31CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATEDcoord: 1..273
IPR012337Ribonuclease H-like superfamilySUPERFAMILYSSF53098Ribonuclease H-likecoord: 12..265

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G032430Wax gourdcucwgoB163
CsaV3_2G032430Wax gourdcucwgoB205
CsaV3_2G032430Cucumber (Chinese Long) v3cuccucB082
CsaV3_2G032430Cucumber (Chinese Long) v3cuccucB106
CsaV3_2G032430Silver-seed gourdcarcucB0159
CsaV3_2G032430Silver-seed gourdcarcucB0665
CsaV3_2G032430Silver-seed gourdcarcucB1015
CsaV3_2G032430Cucumber (Gy14) v2cgybcucB065
CsaV3_2G032430Cucumber (Gy14) v2cgybcucB168
CsaV3_2G032430Cucumber (Gy14) v2cgybcucB326
CsaV3_2G032430Cucumber (Gy14) v1cgycucB247
CsaV3_2G032430Cucumber (Gy14) v1cgycucB414
CsaV3_2G032430Cucurbita maxima (Rimu)cmacucB0016
CsaV3_2G032430Cucurbita maxima (Rimu)cmacucB0082
CsaV3_2G032430Cucurbita maxima (Rimu)cmacucB0192
CsaV3_2G032430Cucurbita maxima (Rimu)cmacucB0422
CsaV3_2G032430Cucurbita maxima (Rimu)cmacucB0935
CsaV3_2G032430Cucurbita maxima (Rimu)cmacucB1048
CsaV3_2G032430Cucurbita moschata (Rifu)cmocucB0006
CsaV3_2G032430Cucurbita moschata (Rifu)cmocucB0071
CsaV3_2G032430Cucurbita moschata (Rifu)cmocucB0176
CsaV3_2G032430Cucurbita moschata (Rifu)cmocucB0925
CsaV3_2G032430Cucurbita pepo (Zucchini)cpecucB0116
CsaV3_2G032430Cucurbita pepo (Zucchini)cpecucB0147
CsaV3_2G032430Cucurbita pepo (Zucchini)cpecucB0677
CsaV3_2G032430Cucurbita pepo (Zucchini)cpecucB0831
CsaV3_2G032430Cucurbita pepo (Zucchini)cpecucB0958
CsaV3_2G032430Cucurbita pepo (Zucchini)cpecucB1004
CsaV3_2G032430Wild cucumber (PI 183967)cpicucB081
CsaV3_2G032430Wild cucumber (PI 183967)cpicucB207
CsaV3_2G032430Wild cucumber (PI 183967)cpicucB391
CsaV3_2G032430Bottle gourd (USVL1VR-Ls)cuclsiB135
CsaV3_2G032430Bottle gourd (USVL1VR-Ls)cuclsiB125
CsaV3_2G032430Bottle gourd (USVL1VR-Ls)cuclsiB152
CsaV3_2G032430Melon (DHL92) v3.5.1cucmeB111
CsaV3_2G032430Melon (DHL92) v3.5.1cucmeB124
CsaV3_2G032430Melon (DHL92) v3.5.1cucmeB151
CsaV3_2G032430Melon (DHL92) v3.6.1cucmedB104
CsaV3_2G032430Melon (DHL92) v3.6.1cucmedB118
CsaV3_2G032430Melon (DHL92) v3.6.1cucmedB144
CsaV3_2G032430Watermelon (Charleston Gray)cucwcgB109
CsaV3_2G032430Watermelon (Charleston Gray)cucwcgB151
CsaV3_2G032430Watermelon (Charleston Gray)cucwcgB173
CsaV3_2G032430Watermelon (97103) v1cucwmB118
CsaV3_2G032430Watermelon (97103) v1cucwmB121
CsaV3_2G032430Watermelon (97103) v1cucwmB139
CsaV3_2G032430Watermelon (97103) v2cucwmbB139
CsaV3_2G032430Watermelon (97103) v2cucwmbB160
CsaV3_2G032430Watermelon (97103) v2cucwmbB170