CsaV3_2G028180 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G028180
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Thiol:disulfide interchange protein like
Location	chr2 : 18594698 .. 18597475 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTATAAACTAAGGCCCACACAAGATTTAAACGGACACAAAAGTAAGGCCCAATGGCTTGGCCCAAACAACAGAAAATGAGGCCGCATTCCCAATTCGACCATCGGCTCACTAAACACATTTTTCCGGAAACTAAAAGAAAAAAGAAACTCATAAAAGAAAAAAGAAAAAGAAGGGAGAATGGAGGCAGAAAAGCCATCTTCAGTGCTCGCCTTGCTTTGTTAGCTGTTGCCATTTTCACATCCTTCTATTTGGTTCCTACGAATTACGCAAAGGAATTCGAAGTTGCATCTCTTTTCTCAATGTGTGAAATTTCTGTAAGCTAGTTTTCTTCTATTGTTGGCGAAGCAAATTGAACTCCTGTCGGCCTCTCACTCACCATTTCTGAATACTCAGCTTCTGGAAGCTCAACGAGGTATTAGGTTTTCTTCGTTTCCCTTTAATTTTTTTTATCCTTAGGTATTAGATGTTATTGGGTTTAGAATTCTAAGCCCACTGGAATTCTTTAATTAAAATTCAAGTTAATCACTTTAATCTAGTGAACAATGAAATTTATAGCGACGTTCAGAAATAATCCCTTGTTTATGGTCATGTTTGGAGGAATTTTAGAATAGTTAGGAGTTAATATTAATTTGTTGTGGTTAGAAGTGTGTGTAAGAGTTGTTTAGTTGGAGTTGAAAATATCACAGAGGGAAAGATGACAAAATAAAGTTTCTTAATAAATGTGCAAAAAGTACGACAGTGAACACTGAAAACTGTTAAAGTGATGGAGCAGAGTTTTTCAACACTGACTTGTGAAGTTGATATGCCAAACACTCCGGCAACATGACTGTTGTAATGTTTAGAATCACTATGAAATATGTGGTTAATCATTTAAAATAAACATTAAATTTGTAAACATGTTTGAGAGTAATTTTAAAACTCAACAGAAGTAAGTTTACCAATCACCCCAAACATGGCTTGGATATGAACTTGAATTCATTTAACTGGCTCAAGCGTGGCGAGTTTCAGATATTTGCACCTAACTTTAATATAGCAGGCAAGAGGAAAATGGAAGTGGATAACCCTAGAAAAAGATTTTTTTTCATTGTACTTTGCTCGTGCCAGTTTATTCTATCAAGCTCTCAACTTCATTATGTCACATGTCTGCTATGGCGTGCTCTGTCATTATTTGGGAGAGACTAAGTACAGTGTCAAACTTAAAATTCAATAATGTTACCCCTTTTACTTTTTCGGTGCTACCTTTGTATTTTTTTCATTTTCTTCTCAATGAAAGTTCAGTTATTCACTTAAAAAACATATTCACGTTTTGACATCCAAATATGGGGAAGAAACTATTGAGTGATTGATTTGAAACTTTTCAAGTGTGCAGAGACTGTATCGATGTAACCATCAAAGACTCAGGATTAAATTTAATTTAATCTGACTTTTGTTGCACAAACTTTATGTTTTGTATTTTCATTTGCAGGGGTAAGGTGATAGTTGTCACTTTTAGATTTAAAGGAAAGAGGAAAGTTAAAGAATATAATGGGTTCAACACCCAAACAGCCTTTCTTTTGCTTCAAATGGCCATGGGACGTAGACCCAAAAAATCGTTCAGACTGTTCGTTTGAGAGTCCTTGGTTGTTCAAATCATTGCAAAATGTGGGTGGCTTTGCTTTCGATTTTGTAAATAAAGCTTCAAAATCATCGCCTCCATGGATGACTTTTAAGTCATTGCAATTCAACCCCTTAACTGGTGGAAATAAGATATCTCAGTCTAGAAAGATGTTAACTCCTGAAGAGCAGGGGGAAGCAGAAAATAGAGCATTGGCAGCAGCATTAGCCAGTGGGAAAGAAGCCACCATAATCGAGTTTTACTCGCCCAAATGTCTCCTTTGCAATTCCTTGCTTAATATTGTTACGGAGATGGAAGCAAGGAATTCAGATTGGCTTAATATTGTGATGGCAGATGCAGAGAATGATAAATGGCTGCCTGAGGTGTTCAACTCTCCTCTTACCTCACATTTATATGTCAACTGTGGCTTTAGGAATTCTAGTTAATTCTAAAAATTGCGTTTTTAGTGAATATATTATCATGGTTTATCGTTTTCAGATGAGTTGATAAAGTATTCTTTAGCCATAATTTAGTAGGGGTTAATTTATGTTATCTTGCAGTTTGAATCAATGCACATTTGATTGAAAATTGCTGAATGCAACTATGAAACCTTCAATCGTTTTCGACATTCATTTTGATAGTTTTGTTTTTTTTCTTCTTGGAAATTGAATGTATAAACTGAAATATTTCCCGTTTGGTTGAATGCTGGGTTAGCACTGCTCCTGATGATCTTGCTTGCATCTTTGTGCAGCTTCTTCATTATGACATTACATATGTTCCTTGCTTTGTGTTGCTGGACAAACACGGCAAGGCGCTGGCAAAGACGAGTCTTCCTAGTAGTCGGCTTCATGTAATTGCAGGGCTTTCTCATCTTATCAAAATGAAATCGCCCAAGAGCACTCCCTGAATCAGATAATAAGCCACCATGTTTGTGAAAGCTGTGATTTAGATGGCATGGGTAAGAACTGTAGTTAATTCGAAAGAAGAGCTTGTTCTCTTTTGAAATTGCACATCACTGTTTACTTTTAGAAATTTACTCTAATTTCTTAAATAAAATAAATACAATAGTTGTATTCTTAACCAAATATAAAAGATGAAAACAAAATTTAAATCTATTTTTTCAGGTTTCATAATCTGACTTGTGGTAAAAAATAGTTAACAAATCAAGAAATTTGAAAGTGG

mRNA sequence

ATGGGTTCAACACCCAAACAGCCTTTCTTTTGCTTCAAATGGCCATGGGACGTAGACCCAAAAAATCGTTCAGACTGTTCGTTTGAGAGTCCTTGGTTGTTCAAATCATTGCAAAATGTGGGTGGCTTTGCTTTCGATTTTGTAAATAAAGCTTCAAAATCATCGCCTCCATGGATGACTTTTAAGTCATTGCAATTCAACCCCTTAACTGGTGGAAATAAGATATCTCAGTCTAGAAAGATGTTAACTCCTGAAGAGCAGGGGGAAGCAGAAAATAGAGCATTGGCAGCAGCATTAGCCAGTGGGAAAGAAGCCACCATAATCGAGTTTTACTCGCCCAAATGTCTCCTTTGCAATTCCTTGCTTAATATTGTTACGGAGATGGAAGCAAGGAATTCAGATTGGCTTAATATTGTGATGGCAGATGCAGAGAATGATAAATGGCTGCCTGAGCTTCTTCATTATGACATTACATATGTTCCTTGCTTTGTGTTGCTGGACAAACACGGCAAGGCGCTGGCAAAGACGAGTCTTCCTAGTAGTCGGCTTCATGTAATTGCAGGGCTTTCTCATCTTATCAAAATGAAATCGCCCAAGAGCACTCCCTGA

Coding sequence (CDS)

ATGGGTTCAACACCCAAACAGCCTTTCTTTTGCTTCAAATGGCCATGGGACGTAGACCCAAAAAATCGTTCAGACTGTTCGTTTGAGAGTCCTTGGTTGTTCAAATCATTGCAAAATGTGGGTGGCTTTGCTTTCGATTTTGTAAATAAAGCTTCAAAATCATCGCCTCCATGGATGACTTTTAAGTCATTGCAATTCAACCCCTTAACTGGTGGAAATAAGATATCTCAGTCTAGAAAGATGTTAACTCCTGAAGAGCAGGGGGAAGCAGAAAATAGAGCATTGGCAGCAGCATTAGCCAGTGGGAAAGAAGCCACCATAATCGAGTTTTACTCGCCCAAATGTCTCCTTTGCAATTCCTTGCTTAATATTGTTACGGAGATGGAAGCAAGGAATTCAGATTGGCTTAATATTGTGATGGCAGATGCAGAGAATGATAAATGGCTGCCTGAGCTTCTTCATTATGACATTACATATGTTCCTTGCTTTGTGTTGCTGGACAAACACGGCAAGGCGCTGGCAAAGACGAGTCTTCCTAGTAGTCGGCTTCATGTAATTGCAGGGCTTTCTCATCTTATCAAAATGAAATCGCCCAAGAGCACTCCCTGA

Protein sequence

MGSTPKQPFFCFKWPWDVDPKNRSDCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPWMTFKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKCLLCNSLLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAKTSLPSSRLHVIAGLSHLIKMKSPKSTP

Homology

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BLAST of CsaV3_2G028180 vs. NCBI nr
Match: XP_004152726.1 (PREDICTED: uncharacterized protein LOC101203280 [Cucumis sativus] >KGN62546.1 hypothetical protein Csa_2G360630 [Cucumis sativus])

HSP 1 Score: 422.5 bits (1085), Expect = 7.8e-115
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDVDPKNRSDCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPWMT 60
           MGSTPKQPFFCFKWPWDVDPKNRSDCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPWMT
Sbjct: 1   MGSTPKQPFFCFKWPWDVDPKNRSDCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPWMT 60

Query: 61  FKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKCLLCNS 120
           FKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKCLLCNS
Sbjct: 61  FKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKCLLCNS 120

Query: 121 LLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAKTSLPS 180
           LLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAKTSLPS
Sbjct: 121 LLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAKTSLPS 180

Query: 181 SRLHVIAGLSHLIKMKSPKSTP 203
           SRLHVIAGLSHLIKMKSPKSTP
Sbjct: 181 SRLHVIAGLSHLIKMKSPKSTP 202

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BLAST of CsaV3_2G028180 vs. NCBI nr
Match: XP_008444648.1 (PREDICTED: uncharacterized protein LOC103487919 [Cucumis melo])

HSP 1 Score: 400.2 bits (1027), Expect = 4.2e-108
Identity = 189/202 (93.56%), Postives = 194/202 (96.04%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDVDPKNRSDCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPWMT 60
           MGSTPKQP FCFKWPWDVD KNRSDCSFE PWLFKSLQNVGGFAF+FVNK SKSSPPWMT
Sbjct: 1   MGSTPKQPLFCFKWPWDVDSKNRSDCSFEGPWLFKSLQNVGGFAFNFVNKVSKSSPPWMT 60

Query: 61  FKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKCLLCNS 120
           FK LQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEAT+IEFYSPKCLLCNS
Sbjct: 61  FKPLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS 120

Query: 121 LLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAKTSLPS 180
           LLNIV E+EARNSDWLNIVMADAENDKWLPELLHYDI YVPCFVLLDKHGKALAKT +PS
Sbjct: 121 LLNIVMEIEARNSDWLNIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS 180

Query: 181 SRLHVIAGLSHLIKMKSPKSTP 203
           SRLHVIAGLSHLIK+KSPKSTP
Sbjct: 181 SRLHVIAGLSHLIKLKSPKSTP 202

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BLAST of CsaV3_2G028180 vs. NCBI nr
Match: XP_022144394.1 (uncharacterized protein LOC111014082 [Momordica charantia])

HSP 1 Score: 345.5 bits (885), Expect = 1.2e-91
Identity = 163/201 (81.09%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDVDPKNRSDCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPWM- 60
           MGSTPKQPFFCFKWPWD DPKN  DCSFE PWLFKSLQNVG FAF+FVNK SKSSPPW+ 
Sbjct: 1   MGSTPKQPFFCFKWPWDADPKNPFDCSFEGPWLFKSLQNVGAFAFNFVNKVSKSSPPWIN 60

Query: 61  TFKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKCLLCN 120
            FK L F    GGNK S  RK LTPEEQGEAE+RA A+ALASGKEAT+IEFYSPKC LCN
Sbjct: 61  AFKPLHFEASNGGNKKSLPRKKLTPEEQGEAEHRAFASALASGKEATVIEFYSPKCRLCN 120

Query: 121 SLLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAKTSLP 180
           SLL++V EMEARNSDWL+IVMADAEN+KWLPELLHYDI YVPCFVLLDKHGKALAKT +P
Sbjct: 121 SLLDVVMEMEARNSDWLSIVMADAENEKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIP 180

Query: 181 SSRLHVIAGLSHLIKMKSPKS 201
           SSRLHVIAGLSHL+ +K P+S
Sbjct: 181 SSRLHVIAGLSHLLNLKRPRS 201

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BLAST of CsaV3_2G028180 vs. NCBI nr
Match: XP_023002017.1 (uncharacterized protein LOC111496027 [Cucurbita maxima] >XP_023002018.1 uncharacterized protein LOC111496027 [Cucurbita maxima] >XP_023002019.1 uncharacterized protein LOC111496027 [Cucurbita maxima] >XP_023002020.1 uncharacterized protein LOC111496027 [Cucurbita maxima])

HSP 1 Score: 330.5 bits (846), Expect = 4.1e-87
Identity = 157/203 (77.34%), Postives = 176/203 (86.70%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDVDPKNRSDCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPWM- 60
           M STPKQP FCFKWPWD++PKN SDCSFE PWLFKSLQNVG FA +F+N+ SKSSPPW+ 
Sbjct: 1   MRSTPKQPLFCFKWPWDINPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 60

Query: 61  TFKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKCLLCN 120
            FK L F+    GNKIS+SRK L+PEEQGEAENRA AAALA GKEAT+IEFYSPKC LC+
Sbjct: 61  AFKPLSFD----GNKISKSRKKLSPEEQGEAENRAFAAALACGKEATVIEFYSPKCPLCS 120

Query: 121 SLLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAKTSLP 180
           SLL  VT+MEARNS WLNIVMADAENDKWLPE+LHYDI+YVPCFV+LDK GKALAKT +P
Sbjct: 121 SLLGFVTQMEARNSQWLNIVMADAENDKWLPEILHYDISYVPCFVILDKQGKALAKTGIP 180

Query: 181 SSRLHVIAGLSHLIKMKSPKSTP 203
           SSRLHVIAGLSHL+K+K P + P
Sbjct: 181 SSRLHVIAGLSHLLKLKRPTTLP 199

[Close]

BLAST of CsaV3_2G028180 vs. NCBI nr
Match: XP_023537358.1 (uncharacterized protein LOC111798444 [Cucurbita pepo subsp. pepo] >XP_023537359.1 uncharacterized protein LOC111798444 [Cucurbita pepo subsp. pepo] >XP_023537360.1 uncharacterized protein LOC111798444 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.1 bits (845), Expect = 5.3e-87
Identity = 157/203 (77.34%), Postives = 177/203 (87.19%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDVDPKNRSDCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPWM- 60
           M STPKQP FCFKWPWD++PKN SDCSFE PWLFKSLQNVG FA +F+N+ SKSSPPW+ 
Sbjct: 1   MRSTPKQPLFCFKWPWDMNPKNPSDCSFEGPWLFKSLQNVGVFASNFLNEVSKSSPPWVN 60

Query: 61  TFKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKCLLCN 120
            FK L F+    GNK+S+SRK L+PEEQGEAENRA AAALASGKEAT+IEFYSPKC LC+
Sbjct: 61  AFKPLSFD----GNKMSKSRKKLSPEEQGEAENRAFAAALASGKEATVIEFYSPKCPLCS 120

Query: 121 SLLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAKTSLP 180
           SLL  VT+MEARN+ WLNIVMADAENDKWLPELLHYDI+YVPCFV+LDK GKALAKT +P
Sbjct: 121 SLLGFVTQMEARNAQWLNIVMADAENDKWLPELLHYDISYVPCFVILDKQGKALAKTGIP 180

Query: 181 SSRLHVIAGLSHLIKMKSPKSTP 203
           SSRLHVIAGLSHL+K+K P + P
Sbjct: 181 SSRLHVIAGLSHLLKLKRPTTLP 199

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BLAST of CsaV3_2G028180 vs. TAIR10
Match: AT5G06430.1 (Thioredoxin superfamily protein)

HSP 1 Score: 231.1 bits (588), Expect = 6.1e-61
Identity = 116/201 (57.71%), Postives = 139/201 (69.15%), Query Frame = 0


Query: 3   STPKQPFFCFKWPWDVD--PKNRSD-CSFESPWLFKSLQNVGGFAFDFVNKASKSSPPWM 62
           ST K PFFC KWPWD +  PK+ S  C F+ PWLF+S+Q +G  A   +    ++     
Sbjct: 11  STSKDPFFCLKWPWDSNKQPKSSSSVCDFQGPWLFRSMQTIGSIALSSLTSFGQNP---- 70

Query: 63  TFKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKCLLCN 122
                 F P          +K L+  EQGEAE RA AAALAS KEAT++EFYS KC LCN
Sbjct: 71  -----NFRP---------KKKPLSSSEQGEAEQRAFAAALASQKEATVLEFYSHKCRLCN 130

Query: 123 SLLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAKTSLP 182
           SLL  V E+E RNS+WL+I MADAEN+KW PELLHYD+ YVPCFVLLDK+G+ALAKT +P
Sbjct: 131 SLLKFVLEVEKRNSNWLSITMADAENEKWFPELLHYDVKYVPCFVLLDKNGQALAKTGVP 190

Query: 183 SSRLHVIAGLSHLIKMKSPKS 201
           SSR HVIAG+SHL+KMK P S
Sbjct: 191 SSRAHVIAGISHLLKMKRPPS 193

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BLAST of CsaV3_2G028180 vs. Swiss-Prot
Match: sp|P73920|TXLA_SYNY3 (Thiol:disulfide interchange protein TxlA homolog OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=txlA PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.0e-09
Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 95  LAAALASGKEATIIEFYSPKCLLCNSLLNIVTEMEARNSDWLNIVMADAENDKWLPELLH 154
           LA AL +G+  T++EFY+  C  C ++   + E++      +N  M + +N+KWLPE+L 
Sbjct: 45  LATALDNGR-PTLVEFYADWCTSCQAMAPDLAELKKNYGGSVNFAMLNVDNNKWLPEVLR 104

Query: 155 YDITYVPCFVLLDKHGKALAKT 177
           Y +  +P FV LD  G A+A++
Sbjct: 105 YRVDGIPHFVYLDDTGTAIAES 125

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BLAST of CsaV3_2G028180 vs. Swiss-Prot
Match: sp|P35088|TXLA_SYNE7 (Thiol:disulfide interchange protein TxlA OS=Synechococcus elongatus (strain PCC 7942) OX=1140 GN=txlA PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.7e-08
Identity = 24/65 (36.92%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 107 IIEFYSPKCLLCNSLLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLL 166
           ++EFY+  C  C ++   +  ++   SD L+ VM + +NDKWLPE+L Y++  +P FV L
Sbjct: 61  LLEFYADWCTSCQAMAGRIAALKQDYSDRLDFVMLNIDNDKWLPEVLDYNVDGIPQFVYL 120

Query: 167 DKHGK 172
           +  G+
Sbjct: 121 NGQGQ 125

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BLAST of CsaV3_2G028180 vs. TrEMBL
Match: tr|A0A0A0LRE2|A0A0A0LRE2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360630 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 5.2e-115
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDVDPKNRSDCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPWMT 60
           MGSTPKQPFFCFKWPWDVDPKNRSDCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPWMT
Sbjct: 1   MGSTPKQPFFCFKWPWDVDPKNRSDCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPWMT 60

Query: 61  FKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKCLLCNS 120
           FKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKCLLCNS
Sbjct: 61  FKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKCLLCNS 120

Query: 121 LLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAKTSLPS 180
           LLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAKTSLPS
Sbjct: 121 LLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAKTSLPS 180

Query: 181 SRLHVIAGLSHLIKMKSPKSTP 203
           SRLHVIAGLSHLIKMKSPKSTP
Sbjct: 181 SRLHVIAGLSHLIKMKSPKSTP 202

[Close]

BLAST of CsaV3_2G028180 vs. TrEMBL
Match: tr|A0A1S3BAS7|A0A1S3BAS7_CUCME (uncharacterized protein LOC103487919 OS=Cucumis melo OX=3656 GN=LOC103487919 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 2.8e-108
Identity = 189/202 (93.56%), Postives = 194/202 (96.04%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDVDPKNRSDCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPWMT 60
           MGSTPKQP FCFKWPWDVD KNRSDCSFE PWLFKSLQNVGGFAF+FVNK SKSSPPWMT
Sbjct: 1   MGSTPKQPLFCFKWPWDVDSKNRSDCSFEGPWLFKSLQNVGGFAFNFVNKVSKSSPPWMT 60

Query: 61  FKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKCLLCNS 120
           FK LQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEAT+IEFYSPKCLLCNS
Sbjct: 61  FKPLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATVIEFYSPKCLLCNS 120

Query: 121 LLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAKTSLPS 180
           LLNIV E+EARNSDWLNIVMADAENDKWLPELLHYDI YVPCFVLLDKHGKALAKT +PS
Sbjct: 121 LLNIVMEIEARNSDWLNIVMADAENDKWLPELLHYDIRYVPCFVLLDKHGKALAKTGIPS 180

Query: 181 SRLHVIAGLSHLIKMKSPKSTP 203
           SRLHVIAGLSHLIK+KSPKSTP
Sbjct: 181 SRLHVIAGLSHLIKLKSPKSTP 202

[Close]

BLAST of CsaV3_2G028180 vs. TrEMBL
Match: tr|A0A2P5FN18|A0A2P5FN18_9ROSA (Thioredoxin OS=Trema orientalis OX=63057 GN=TorRG33x02_050520 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 9.6e-77
Identity = 146/203 (71.92%), Postives = 163/203 (80.30%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDVDPKNRS--DCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPW 60
           MGS  K+P FCFK PW VD   RS  DC+FE+PWLFKSLQNVG  AF FVN  SKS  P 
Sbjct: 1   MGSNQKKPLFCFKLPWYVDQNTRSPNDCTFETPWLFKSLQNVGSLAFKFVNSISKSPEPL 60

Query: 61  MT---FKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKC 120
           MT   FK  QF+  T  NK+ +S+  L+PEEQGEAE+RA A+ALAS KEAT++EFYSPKC
Sbjct: 61  MTDSNFKPFQFDAGTSQNKVLKSKPNLSPEEQGEAEHRAFASALASSKEATVLEFYSPKC 120

Query: 121 LLCNSLLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAK 180
            LC+SLLN V E+E RNSDWLNIVMADAENDKWLPELLHYDI YVPCFVLLDK G+ALAK
Sbjct: 121 RLCSSLLNFVLEVEGRNSDWLNIVMADAENDKWLPELLHYDIRYVPCFVLLDKKGRALAK 180

Query: 181 TSLPSSRLHVIAGLSHLIKMKSP 199
           T +PSSRLHVIAGLSHL+KMK P
Sbjct: 181 TGVPSSRLHVIAGLSHLLKMKRP 203

[Close]

BLAST of CsaV3_2G028180 vs. TrEMBL
Match: tr|A0A2P5ANI1|A0A2P5ANI1_PARAD (Thioredoxin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_315300 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 2.8e-76
Identity = 145/203 (71.43%), Postives = 162/203 (79.80%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWDVDPKNRS--DCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPW 60
           MGS  K+P FCFK PWDVD   RS  DC+FE+PWLFKSLQNVG  AF FVN  SKS  P 
Sbjct: 1   MGSNQKKPLFCFKLPWDVDQNTRSPNDCTFETPWLFKSLQNVGSLAFKFVNSISKSPEPL 60

Query: 61  MT---FKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKC 120
            T   FK  QF+  T  NK+ +S+  L+PEEQGEAE+RA A+ALAS KEAT++EFYSPKC
Sbjct: 61  GTDSNFKPFQFDAGTSQNKVLKSKPNLSPEEQGEAEHRAFASALASSKEATVLEFYSPKC 120

Query: 121 LLCNSLLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAK 180
            LC+SLLN V E+E RNSDWLNIVMADAENDKWLPELLHYDI YVPCFVLLD  G+ALAK
Sbjct: 121 RLCSSLLNFVLEVEGRNSDWLNIVMADAENDKWLPELLHYDIRYVPCFVLLDNKGRALAK 180

Query: 181 TSLPSSRLHVIAGLSHLIKMKSP 199
           T +PSSRLHVIAGLSHL+KMK P
Sbjct: 181 TGVPSSRLHVIAGLSHLLKMKRP 203

[Close]

BLAST of CsaV3_2G028180 vs. TrEMBL
Match: tr|A0A2I4GRV6|A0A2I4GRV6_9ROSI (thioredoxin-like protein HCF164, chloroplastic OS=Juglans regia OX=51240 GN=LOC109010306 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 6.9e-75
Identity = 137/199 (68.84%), Postives = 166/199 (83.42%), Query Frame = 0


Query: 1   MGSTPKQPFFCFKWPWD--VDPKNRSDCSFESPWLFKSLQNVGGFAFDFVNKASKSSPPW 60
           M   PKQP FC K+PWD   +P+N + CSFE PW+FKS+Q++G  AF+FV+  SKSS PW
Sbjct: 1   MNPFPKQPLFCLKFPWDNHQNPRNANICSFEGPWVFKSMQSLGSAAFNFVSSVSKSSYPW 60

Query: 61  M-TFKSLQFNPLTGGNKISQSRKMLTPEEQGEAENRALAAALASGKEATIIEFYSPKCLL 120
           M TFK  Q +  T  ++  +SRK+LTPEEQGEAE+RA AAALA+GKEAT+IEFYSPKC L
Sbjct: 61  MGTFKPFQLDAGTNQSQSLKSRKILTPEEQGEAEHRAFAAALATGKEATVIEFYSPKCRL 120

Query: 121 CNSLLNIVTEMEARNSDWLNIVMADAENDKWLPELLHYDITYVPCFVLLDKHGKALAKTS 180
           CNSL+N V+E+E RNSDWLN+VMADAEN++WLPELLHYDI YVPCFVLLD+ G+ALAKT 
Sbjct: 121 CNSLVNFVSEVEGRNSDWLNVVMADAENERWLPELLHYDIRYVPCFVLLDQKGRALAKTG 180

Query: 181 LPSSRLHVIAGLSHLIKMK 197
           +PSSRLHV+AGLSHL+KMK
Sbjct: 181 VPSSRLHVVAGLSHLLKMK 199

The following BLAST results are available for this feature:

BLAST of CsaV3_2G028180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152726.1	7.8e-115	100.00	PREDICTED: uncharacterized protein LOC101203280 [Cucumis sativus] >KGN62546.1 hy...	[more]
XP_008444648.1	4.2e-108	93.56	PREDICTED: uncharacterized protein LOC103487919 [Cucumis melo]	[more]
XP_022144394.1	1.2e-91	81.09	uncharacterized protein LOC111014082 [Momordica charantia]	[more]
XP_023002017.1	4.1e-87	77.34	uncharacterized protein LOC111496027 [Cucurbita maxima] >XP_023002018.1 uncharac...	[more]
XP_023537358.1	5.3e-87	77.34	uncharacterized protein LOC111798444 [Cucurbita pepo subsp. pepo] >XP_023537359....	[more]

BLAST of CsaV3_2G028180 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06430.1	6.1e-61	57.71	Thioredoxin superfamily protein	[more]

BLAST of CsaV3_2G028180 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P73920\|TXLA_SYNY3	3.0e-09	36.59	Thiol:disulfide interchange protein TxlA homolog OS=Synechocystis sp. (strain PC...	[more]
sp\|P35088\|TXLA_SYNE7	9.7e-08	36.92	Thiol:disulfide interchange protein TxlA OS=Synechococcus elongatus (strain PCC ...	[more]

BLAST of CsaV3_2G028180 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LRE2\|A0A0A0LRE2_CUCSA	5.2e-115	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360630 PE=4 SV=1	[more]
tr\|A0A1S3BAS7\|A0A1S3BAS7_CUCME	2.8e-108	93.56	uncharacterized protein LOC103487919 OS=Cucumis melo OX=3656 GN=LOC103487919 PE=...	[more]
tr\|A0A2P5FN18\|A0A2P5FN18_9ROSA	9.6e-77	71.92	Thioredoxin OS=Trema orientalis OX=63057 GN=TorRG33x02_050520 PE=4 SV=1	[more]
tr\|A0A2P5ANI1\|A0A2P5ANI1_PARAD	2.8e-76	71.43	Thioredoxin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_315300 PE=4 SV=1	[more]
tr\|A0A2I4GRV6\|A0A2I4GRV6_9ROSI	6.9e-75	68.84	thioredoxin-like protein HCF164, chloroplastic OS=Juglans regia OX=51240 GN=LOC1...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0045454	cell redox homeostasis

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf
IPR013766	Thioredoxin_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005623	cell
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G028180.1	CsaV3_2G028180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 96..172 e-value: 2.1E-7 score: 30.7
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 85..190 e-value: 4.9E-10 score: 41.2
None	No IPR available	PANTHER	PTHR43601	FAMILY NOT NAMED	coord: 10..194
None	No IPR available	PANTHER	PTHR43601:SF3	THIOREDOXIN, MITOCHONDRIAL	coord: 10..194
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 98..175

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G028180	CSPI02G19480	Wild cucumber (PI 183967)	cpicucB081
CsaV3_2G028180	Cucsa.232620	Cucumber (Gy14) v1	cgycucB347
CsaV3_2G028180	CmaCh12G005160	Cucurbita maxima (Rimu)	cmacucB0203
CsaV3_2G028180	CmoCh12G004560	Cucurbita moschata (Rifu)	cmocucB0186
CsaV3_2G028180	Cp4.1LG07g04620	Cucurbita pepo (Zucchini)	cpecucB1013
CsaV3_2G028180	CsGy2G019350	Cucumber (Gy14) v2	cgybcucB065
CsaV3_2G028180	Cla022541	Watermelon (97103) v1	cucwmB124
CsaV3_2G028180	MELO3C010894	Melon (DHL92) v3.5.1	cucmeB124
CsaV3_2G028180	ClCG08G015590	Watermelon (Charleston Gray)	cucwcgB176
CsaV3_2G028180	Lsi08G014420	Bottle gourd (USVL1VR-Ls)	cuclsiB155
CsaV3_2G028180	MELO3C010894.2	Melon (DHL92) v3.6.1	cucmedB118
CsaV3_2G028180	Cla97C08G159200	Watermelon (97103) v2	cucwmbB164
CsaV3_2G028180	Bhi04G000282	Wax gourd	cucwgoB169

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G028180	Cucumber (Chinese Long) v3	cuccucB081
CsaV3_2G028180	Cucumber (Chinese Long) v3	cuccucB100
CsaV3_2G028180	Silver-seed gourd	carcucB0119
CsaV3_2G028180	Silver-seed gourd	carcucB0209
CsaV3_2G028180	Silver-seed gourd	carcucB0302
CsaV3_2G028180	Silver-seed gourd	carcucB0809
CsaV3_2G028180	Cucumber (Gy14) v2	cgybcucB167
CsaV3_2G028180	Cucumber (Gy14) v1	cgycucB166
CsaV3_2G028180	Cucurbita maxima (Rimu)	cmacucB0015
CsaV3_2G028180	Cucurbita maxima (Rimu)	cmacucB0524
CsaV3_2G028180	Cucurbita maxima (Rimu)	cmacucB0926
CsaV3_2G028180	Cucurbita moschata (Rifu)	cmocucB0004
CsaV3_2G028180	Cucurbita moschata (Rifu)	cmocucB0510
CsaV3_2G028180	Cucurbita moschata (Rifu)	cmocucB0918
CsaV3_2G028180	Cucurbita pepo (Zucchini)	cpecucB0106
CsaV3_2G028180	Cucurbita pepo (Zucchini)	cpecucB0675
CsaV3_2G028180	Cucurbita pepo (Zucchini)	cpecucB0957
CsaV3_2G028180	Wild cucumber (PI 183967)	cpicucB206
CsaV3_2G028180	Bottle gourd (USVL1VR-Ls)	cuclsiB129
CsaV3_2G028180	Melon (DHL92) v3.5.1	cucmeB150
CsaV3_2G028180	Melon (DHL92) v3.6.1	cucmedB143
CsaV3_2G028180	Watermelon (Charleston Gray)	cucwcgB150
CsaV3_2G028180	Watermelon (97103) v1	cucwmB138
CsaV3_2G028180	Watermelon (97103) v1	cucwmB164
CsaV3_2G028180	Watermelon (97103) v2	cucwmbB137
CsaV3_2G028180	Wax gourd	cucwgoB204