CsaV3_2G028010 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G028010
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	B3 domain-containing protein family
Location	chr2 : 18510551 .. 18513182 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAGTGAGAAGTTAACGGTCGACTGTGACAATTTTCGTACGAAATTGAAATTTCCCCAATTCTCGAGTATACTGAATCTTACCATTTCTTCTATTCGCCAAAACCTACGAATCGAGGAAGAAGAAGAAGAAGAGACCATGGGAATCTCAAACCTCTCATACGAGGAATGTCGTCAGAAAAGAGTTGAAGAAAACAAGAAGAGAATGGAAGCCCTAAATTTGCCCTTACTTTCTCAAGCTCTCCTCGATTCTTCCCCTTCCAAATCCTCCCCTGTAATTCCATTTCCTTTTCTTTTTTTCTTTTTTTCTCATTCATGTTTTCCCATGGATCATTGAGCTTATTTCGTTATTTGACCGATTTGTAGAGTAAGCAGGTCAAAGCCTCGCGTGATGCAGAAACAACTGGTGGTGGTGAGGAGGTCCAGTCGCGTAGCAAAGCAACCAACGCCTGTTTACGCTGAAGTAAGTCATCAGTATTATGCTAAACCTACTTAGATCGATGAACTAGGGTTTACTGCTGTTTGTTTTGAATCGTATAATCTAGACCACAAAATCCCTTTACATTGGTTTTGCTTTCTTTTCTTTTCAATTAAACTGGCAGGTTCTTGTCGATCGTGTGGCGATTCCTAGAAGGTATTTCTACTGAAAACTGATTGGAAAAAAGATGAAAGATTCGTCATACAGTTGGATCGTTTAGCATTGTTACTAGCTTTCTTTTGTTCGGGATTATAGGATCTCCAGAGCAAGAGATTTTTCAGCCCAGTTTTATGCTTCGGATGAAGCAAGAAAAAAAGCCTTTGAAAGAGCTCTTGAGTTACAATCTGGATTGGAGCCGAATTATCCCAGCTGTATAAAGTCGATGGTTCGGTCTCATGTTAGTGGTTGTTTCTGGCTGGTAAGCTAGCAAAGATTATCTATTAAGATTATCTATTAACTTGTTGAACTGTATGTGATATTAGTTCATTAAATCATAAATCATTGGAAAAAGAATGCTTTTGAACACAGGGCCTTCCTTCTCATTTCTGCAAGACGCACCTTCCAAAGAATGATGGAGTAATGACTTTAATAGATGAAGATGGTGATGAGTATCCAATAATATATTTGGCACGAAAAACAGGTTTTAGTGGTGGATGGAAGGGTTTTTCAATTGCTCATAAGTTAAGTGATGGAGATGCTGTGGTTTTTCAACACATTAAACCTACAGCCTGCAAGGTGATTGCACTTCATCTCTTTACTTGATTCAAAATTCTTCGACCTTTTGTCTTGTCTGCATACGTTTTCTGAAACAATCACTACATATTGGTGTTCATGTATGGACAAGTTATTATAATGTGACTACATCATAATAACAAGTTGAACATGGATTGCAGAATCTGCATGCTCCCTTATAGCTACTAGATATAACATTATCTATTTTTAGTTTTGGAATTTTGTCTAAGATTAAGATTTAAAGATAATTTTGGCTGTGGCTTACAACACAGAGAGGAGAGTGTTACCATCAACCATGTAGAAAAAGATGTTTAAAGATTGAAAACAGACTAATAAAAGGTCCCTTACTCTTTCAGATATTTAGGAATTGTTTTGTTTTTGTTTTTTCGCATGAATTCACTCACATAATATTAATTCCCTTATTATTTCTTTCAGGTGTACATCTTTAGAGCGAATGGTTCCAAAGAAGAGAGTGATTCTAACAATAGCTAAATGATTTACTTTCTTATCCCAAGTCAGGTAATCTTAAAATAAAATTTTACTAATTCTAAATTCTCTAAATGCTCTGAGATTATTAGTTCTATCTTTACAGTATACGTTCAGCCCGCATGAAATTGCACAAAACAAGTTTGGAATTTCAGGGTTGGTGCTTCTAATTAAGTGAAGCAATTTTCTTGAAGAATACCATTATAAAATGTTTTGAATATTTTTAAATTTTCAAAACAACTTAGTTAAATATCATATGGCATACTCTTAAATTCTAATTGGTTAAGAAGCTCTTTTGACCTTCCAGTTTTTATCCAGGTGCATGATTGTGCTTAGTGTACGATCATGATCTCCTACTCTAAAGTTATTCTGAAAATGCTCCAGTTCATTTCAGGTGATAATTTGAAGAGGCTTGGGGAAGATGTGCACATAATGCAACTACTTTTTTGCAAATTTCTTTTGAGTAAAAGGCAATCTGTGTCTTGTACAATCTTGTATCAGCTGAATTATATTTGGGGGCGGTGTGTGCATTCAAGTCTCCCTTGTTCCTAACATTTTTCTTCTCTCTTTTTTGTTAAACCCTTTTTTTTGTTTTAGCTTAGTAGACTACTTGCTATCTGATAGATTTTGCTGATTTTCATTGGGAAAAAGCCTTGAAGGTTTCTAGTGGGATGGCCCCCGTGTAAGCCATTGTTACAATAGCTCTTAAACTGGTTTCTTGAGTAATATTTTGTATTCCTCTCCAGAAAGTCCAAAACGAAGGGCACATTTGGATAGATTTCTAAAAGTAATTTTATTTGAAACACGTGAACGGTGGATAGGTGAGTCCCAATAGTTCTAATTAGCATAAATTTATGGAGTGTTAATTATCTTGTAATTTCAAATTACTAGAACTGATTATGTTTAGGGTGACATATGGGGTAGTGTGTATGTGTAA

mRNA sequence

ATGCAGAAACAACTGGTGGTGGTGAGGAGGTCCAGTCGCGTAGCAAAGCAACCAACGCCTGTTTACGCTGAAGTTCTTGTCGATCGTGTGGCGATTCCTAGAAGGATCTCCAGAGCAAGAGATTTTTCAGCCCAGTTTTATGCTTCGGATGAAGCAAGAAAAAAAGCCTTTGAAAGAGCTCTTGAGTTACAATCTGGATTGGAGCCGAATTATCCCAGCTGTATAAAGTCGATGGTTCGGTCTCATGTTAGTGGTTGTTTCTGGCTGGGCCTTCCTTCTCATTTCTGCAAGACGCACCTTCCAAAGAATGATGGAGTAATGACTTTAATAGATGAAGATGGTGATGAGTATCCAATAATATATTTGGCACGAAAAACAGGTTTTAGTGGTGGATGGAAGGGTTTTTCAATTGCTCATAAGTTAAGTGATGGAGATGCTGTGGTTTTTCAACACATTAAACCTACAGCCTGCAAGAGAGGAGAGTGTTACCATCAACCATGTAGAAAAAGATGTTTAAAGATTGAAAACAGACTAATAAAAGGTGTACATCTTTAG

Coding sequence (CDS)

ATGCAGAAACAACTGGTGGTGGTGAGGAGGTCCAGTCGCGTAGCAAAGCAACCAACGCCTGTTTACGCTGAAGTTCTTGTCGATCGTGTGGCGATTCCTAGAAGGATCTCCAGAGCAAGAGATTTTTCAGCCCAGTTTTATGCTTCGGATGAAGCAAGAAAAAAAGCCTTTGAAAGAGCTCTTGAGTTACAATCTGGATTGGAGCCGAATTATCCCAGCTGTATAAAGTCGATGGTTCGGTCTCATGTTAGTGGTTGTTTCTGGCTGGGCCTTCCTTCTCATTTCTGCAAGACGCACCTTCCAAAGAATGATGGAGTAATGACTTTAATAGATGAAGATGGTGATGAGTATCCAATAATATATTTGGCACGAAAAACAGGTTTTAGTGGTGGATGGAAGGGTTTTTCAATTGCTCATAAGTTAAGTGATGGAGATGCTGTGGTTTTTCAACACATTAAACCTACAGCCTGCAAGAGAGGAGAGTGTTACCATCAACCATGTAGAAAAAGATGTTTAAAGATTGAAAACAGACTAATAAAAGGTGTACATCTTTAG

Protein sequence

MQKQLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERALELQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIYLARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACKRGECYHQPCRKRCLKIENRLIKGVHL

Homology

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BLAST of CsaV3_2G028010 vs. NCBI nr
Match: XP_011649586.1 (PREDICTED: B3 domain-containing protein At3g19184-like [Cucumis sativus] >XP_011649587.1 PREDICTED: B3 domain-containing protein At3g19184-like [Cucumis sativus])

HSP 1 Score: 326.2 bits (835), Expect = 7.0e-86
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MQKQLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERA 60
           MQKQLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERA
Sbjct: 1   MQKQLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERA 60

Query: 61  LELQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPII 120
           LELQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPII
Sbjct: 61  LELQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPII 120

Query: 121 YLARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 159
           YLARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK
Sbjct: 121 YLARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 158

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BLAST of CsaV3_2G028010 vs. NCBI nr
Match: KGN62530.1 (hypothetical protein Csa_2G359985 [Cucumis sativus])

HSP 1 Score: 322.8 bits (826), Expect = 7.7e-85
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 3   KQLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERALE 62
           KQLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERALE
Sbjct: 46  KQLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERALE 105

Query: 63  LQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIYL 122
           LQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIYL
Sbjct: 106 LQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIYL 165

Query: 123 ARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 159
           ARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK
Sbjct: 166 ARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 201

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BLAST of CsaV3_2G028010 vs. NCBI nr
Match: XP_022144315.1 (B3 domain-containing protein At5g42700-like [Momordica charantia])

HSP 1 Score: 276.6 bits (706), Expect = 6.3e-71
Identity = 135/157 (85.99%), Postives = 140/157 (89.17%), Query Frame = 0


Query: 2   QKQLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERAL 61
           QKQLVVVRRSSRVAKQ  PVYAEVL++RV IPRR SRARDFS QFYASDEARK AFERA 
Sbjct: 55  QKQLVVVRRSSRVAKQSAPVYAEVLINRVVIPRRTSRARDFSNQFYASDEARKNAFERAE 114

Query: 62  ELQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIY 121
           +LQSGLEPNYPS IKSMVRSHVSGCFWLGLP+H CKT LP  DGVMTLIDEDGDEYP IY
Sbjct: 115 QLQSGLEPNYPSFIKSMVRSHVSGCFWLGLPAHVCKTILPNRDGVMTLIDEDGDEYPTIY 174

Query: 122 LARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 159
           LARKTG SGGWKGFSIAHKL DGDAVVFQ I+PT CK
Sbjct: 175 LARKTGLSGGWKGFSIAHKLGDGDAVVFQLIRPTTCK 211

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BLAST of CsaV3_2G028010 vs. NCBI nr
Match: XP_023538062.1 (B3 domain-containing protein At5g42700-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.8 bits (704), Expect = 1.1e-70
Identity = 133/158 (84.18%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MQKQLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERA 60
           M+KQLVVVRRSSRVAKQP PVYAEVLV+RVAIP+R S ARD+   F+ASDEARK AFERA
Sbjct: 58  MKKQLVVVRRSSRVAKQPGPVYAEVLVNRVAIPKRFSSARDYPDHFFASDEARKNAFERA 117

Query: 61  LELQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPII 120
             LQS LEPNYP+ IKSMVRSHVSGCFWLGLPSHFCK HLP NDGVMTLIDE GDEYPII
Sbjct: 118 ERLQSVLEPNYPTFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLIDEGGDEYPII 177

Query: 121 YLARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 159
           YLARKTGFSGGWKGFS+AHKL+DGDAV+FQ IKPT CK
Sbjct: 178 YLARKTGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCK 215

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BLAST of CsaV3_2G028010 vs. NCBI nr
Match: XP_022951156.1 (B3 domain-containing protein At5g42700-like [Cucurbita moschata])

HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70
Identity = 132/158 (83.54%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MQKQLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERA 60
           M+KQLVVVRRSSRVAKQP PVYAEVLV+RVAIP+R S ARD+   F+ASDEARK AFERA
Sbjct: 56  MKKQLVVVRRSSRVAKQPGPVYAEVLVNRVAIPKRFSSARDYPDHFFASDEARKNAFERA 115

Query: 61  LELQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPII 120
             LQS LEPNYP+ IKSMVRSHVSGCFWLGLPSHFCK HLP NDGVMTL+DE GDEYPII
Sbjct: 116 ERLQSVLEPNYPNFIKSMVRSHVSGCFWLGLPSHFCKEHLPTNDGVMTLMDEGGDEYPII 175

Query: 121 YLARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 159
           YLARKTGFSGGWKGFS+AHKL+DGDAV+FQ IKPT CK
Sbjct: 176 YLARKTGFSGGWKGFSVAHKLADGDAVIFQLIKPTTCK 213

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BLAST of CsaV3_2G028010 vs. TAIR10
Match: AT3G19184.1 (AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 159.1 bits (401), Expect = 2.7e-39
Identity = 84/152 (55.26%), Postives = 104/152 (68.42%), Query Frame = 0


Query: 8   VRRSSRVAKQPTPVYAEVLVDRV-AIPRRISRARDFSAQFYASDEARKKAFERALELQSG 67
           VRRSSR AK P P Y E  ++ +   PRR SR RD   + YASD+AR  AF+RA +LQS 
Sbjct: 64  VRRSSR-AKGPPPSYKEFGLEPLERRPRRSSRRRDLLNRVYASDDARMYAFDRAEKLQSS 123

Query: 68  LEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIYLARKT 127
           L+  Y S  K M++SHV+G FWLGLP  FCK H+PK D +MTL+DE+ +E    YLA+K 
Sbjct: 124 LDSEYASFTKPMLQSHVTGGFWLGLPLPFCKAHMPKRDVIMTLVDEEEEESQAKYLAQKN 183

Query: 128 GFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 159
           G SGGW+GF+I H+L DGDAVVF  I  T  K
Sbjct: 184 GLSGGWRGFAIDHQLVDGDAVVFHLIARTTFK 214

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BLAST of CsaV3_2G028010 vs. TAIR10
Match: AT5G42700.1 (AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 153.3 bits (386), Expect = 1.5e-37
Identity = 76/141 (53.90%), Postives = 97/141 (68.79%), Query Frame = 0


Query: 19  TPVYAEVLVDRVAIPRR-ISRARDFSAQFYASDEARKKAFERALELQSGLEPNYPSCIKS 78
           TP    V V RV I RR + + RD   + Y S+E R +A  RA + Q  L   YPS +KS
Sbjct: 54  TPEKKMVDVKRVHIQRRGVGKKRDLLNRVYVSEEIRDEAISRANKFQDELGSGYPSFVKS 113

Query: 79  MVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIYLARKTGFSGGWKGFSI 138
           M++SHVSG FWLGLP  FCK+HL  +DGV+TLIDE+G+EY  IYLARK G SGGW GF++
Sbjct: 114 MLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLIDEEGEEYETIYLARKNGLSGGWMGFAV 173

Query: 139 AHKLSDGDAVVFQHIKPTACK 159
           AH L+ GD +VF+ ++ TA K
Sbjct: 174 AHNLAYGDTLVFELVRRTAFK 194

[Close]

BLAST of CsaV3_2G028010 vs. TAIR10
Match: AT5G58280.1 (AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 120.2 bits (300), Expect = 1.4e-27
Identity = 64/160 (40.00%), Postives = 93/160 (58.13%), Query Frame = 0


Query: 9   RRSSRVAKQPTPVYAEVLVD--RVAIPRRISRARDFSAQF--------YASDEARKKAFE 68
           RRSSRV    +    +V+VD  R +  RR   +  ++           +AS E +  AF+
Sbjct: 52  RRSSRVRTVISSYRDDVVVDTGRTSNLRRSRHSSTWATYISRPLHECKFASYEEKVGAFK 111

Query: 69  RALELQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYP 128
            A + Q  L+  +P  +KSMVRSHV  CFWLGLPS FC  + P+    + L DE+G+ Y 
Sbjct: 112 AAEKFQRSLKSPHPYFVKSMVRSHVYSCFWLGLPSRFCADNFPEETMEIELEDEEGEVYE 171

Query: 129 IIYLARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 159
            +Y+ R+ G SGGWK F++ HKL DGDA++F+ ++P   K
Sbjct: 172 AVYIGRRAGLSGGWKRFALDHKLDDGDALLFELVEPKKFK 211

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BLAST of CsaV3_2G028010 vs. Swiss-Prot
Match: sp|Q1G3M3|Y3918_ARATH (B3 domain-containing protein At3g19184 OS=Arabidopsis thaliana OX=3702 GN=At3g19184 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.8e-38
Identity = 84/152 (55.26%), Postives = 104/152 (68.42%), Query Frame = 0


Query: 8   VRRSSRVAKQPTPVYAEVLVDRV-AIPRRISRARDFSAQFYASDEARKKAFERALELQSG 67
           VRRSSR AK P P Y E  ++ +   PRR SR RD   + YASD+AR  AF+RA +LQS 
Sbjct: 64  VRRSSR-AKGPPPSYKEFGLEPLERRPRRSSRRRDLLNRVYASDDARMYAFDRAEKLQSS 123

Query: 68  LEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIYLARKT 127
           L+  Y S  K M++SHV+G FWLGLP  FCK H+PK D +MTL+DE+ +E    YLA+K 
Sbjct: 124 LDSEYASFTKPMLQSHVTGGFWLGLPLPFCKAHMPKRDVIMTLVDEEEEESQAKYLAQKN 183

Query: 128 GFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 159
           G SGGW+GF+I H+L DGDAVVF  I  T  K
Sbjct: 184 GLSGGWRGFAIDHQLVDGDAVVFHLIARTTFK 214

[Close]

BLAST of CsaV3_2G028010 vs. Swiss-Prot
Match: sp|Q9FMZ4|Y5270_ARATH (B3 domain-containing protein At5g42700 OS=Arabidopsis thaliana OX=3702 GN=At5g42700 PE=2 SV=2)

HSP 1 Score: 153.3 bits (386), Expect = 2.6e-36
Identity = 76/141 (53.90%), Postives = 97/141 (68.79%), Query Frame = 0


Query: 19  TPVYAEVLVDRVAIPRR-ISRARDFSAQFYASDEARKKAFERALELQSGLEPNYPSCIKS 78
           TP    V V RV I RR + + RD   + Y S+E R +A  RA + Q  L   YPS +KS
Sbjct: 54  TPEKKMVDVKRVHIQRRGVGKKRDLLNRVYVSEEIRDEAISRANKFQDELGSGYPSFVKS 113

Query: 79  MVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIYLARKTGFSGGWKGFSI 138
           M++SHVSG FWLGLP  FCK+HL  +DGV+TLIDE+G+EY  IYLARK G SGGW GF++
Sbjct: 114 MLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLIDEEGEEYETIYLARKNGLSGGWMGFAV 173

Query: 139 AHKLSDGDAVVFQHIKPTACK 159
           AH L+ GD +VF+ ++ TA K
Sbjct: 174 AHNLAYGDTLVFELVRRTAFK 194

[Close]

BLAST of CsaV3_2G028010 vs. Swiss-Prot
Match: sp|Q69V36|Y6944_ORYSJ (B3 domain-containing protein Os06g0194400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0194400 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.1e-33
Identity = 76/157 (48.41%), Postives = 99/157 (63.06%), Query Frame = 0


Query: 8   VRRSSRVAKQP-TPVYAEVLVDRVAIPRRISRA-----RDFSAQFYASDEARKKAFERAL 67
           +RRS RVA  P  P Y +   D     +RI R+     RD S + YA+DE R  A   A 
Sbjct: 70  LRRSGRVANLPEKPKYRDEFQD---FEKRIRRSYGGKRRDLSNRVYATDEQRDYAINAAQ 129

Query: 68  ELQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIY 127
           EL+  L  +YP  +K M++SHV+G FWL LP+HF + +LPK D  + L+DE+ DE+  +Y
Sbjct: 130 ELEEELGSDYPIFVKPMLQSHVTGGFWLSLPTHFSRKYLPKRDETIRLVDEEDDEFDTLY 189

Query: 128 LARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 159
           LA K G SGGW+GFSIAHKL DGD +VFQ I+ T  K
Sbjct: 190 LANKRGLSGGWRGFSIAHKLVDGDCLVFQLIQRTKFK 223

[Close]

BLAST of CsaV3_2G028010 vs. Swiss-Prot
Match: sp|Q10QS9|Y3845_ORYSJ (B3 domain-containing protein Os03g0184500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0184500 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.7e-33
Identity = 73/154 (47.40%), Postives = 97/154 (62.99%), Query Frame = 0


Query: 9   RRSSRVAKQPTPVYAEVLVDRV----AIPRRISRARDFSAQFYASDEARKKAFERALELQ 68
           RRS R+A  P   YAEV  D        PR+   +   + +   S EAR +A  +A EL+
Sbjct: 68  RRSRRLANLPEVKYAEVAPDGAERMKRSPRKAIDSIYLATRGSISMEARLEAARKAEELE 127

Query: 69  SGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIYLAR 128
           S L+P +PS +K M+ SHV   FWLGLP HFC+T+LPK+D ++TL+DE  +++   YLA 
Sbjct: 128 SQLDPEFPSFVKPMLHSHVVRGFWLGLPRHFCETYLPKHDAIVTLLDEKDEQFDTNYLAY 187

Query: 129 KTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 159
           K G SGGW GF++ H L DGDA VFQ +KPT  K
Sbjct: 188 KNGLSGGWAGFALDHGLLDGDATVFQLVKPTTFK 221

[Close]

BLAST of CsaV3_2G028010 vs. Swiss-Prot
Match: sp|Q5KQI4|Y5814_ORYSJ (B3 domain-containing protein Os05g0481400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0481400 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-31
Identity = 60/125 (48.00%), Postives = 87/125 (69.60%), Query Frame = 0


Query: 34  RRISRARDFSAQFYASDEARKKAFERALELQSGLEPNYPSCIKSMVRSHVSGCFWLGLPS 93
           R   + RD++ +  AS E +++AF++A  LQ+ L+P  PS +K+MVRSHVS CFWLGLP+
Sbjct: 100 RSTEQGRDYTGR-VASYEQQQRAFKKAERLQNSLDPENPSFVKTMVRSHVSSCFWLGLPT 159

Query: 94  HFCKTHLPKNDGVMTLIDEDGDEYPIIYLARKTGFSGGWKGFSIAHKLSDGDAVVFQHIK 153
            FCK HLP  +  M L DE+G E+  +Y+  +TG SGGW+GF++ H L DGD++VF+  +
Sbjct: 160 RFCKLHLPPKEYKMVLEDEEGGEFDSVYIGNRTGLSGGWRGFAMHHNLEDGDSLVFELAE 219

Query: 154 PTACK 159
           P   K
Sbjct: 220 PDRFK 223

[Close]

BLAST of CsaV3_2G028010 vs. TrEMBL
Match: tr|A0A0A0LKX3|A0A0A0LKX3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359985 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 5.1e-85
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 3   KQLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERALE 62
           KQLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERALE
Sbjct: 46  KQLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERALE 105

Query: 63  LQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIYL 122
           LQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIYL
Sbjct: 106 LQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIYL 165

Query: 123 ARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 159
           ARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK
Sbjct: 166 ARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 201

[Close]

BLAST of CsaV3_2G028010 vs. TrEMBL
Match: tr|A0A0A0LNH0|A0A0A0LNH0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359980 PE=4 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 9.7e-68
Identity = 126/157 (80.25%), Postives = 140/157 (89.17%), Query Frame = 0


Query: 2   QKQLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERAL 61
           QK+LVVVRRSSRVAKQ  PVYAEV+++RV IPRRIS+ARD S + YASDEARK+AFERA 
Sbjct: 55  QKELVVVRRSSRVAKQTAPVYAEVIINRVVIPRRISKARDLSNRVYASDEARKEAFERAE 114

Query: 62  ELQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIY 121
           +LQSGLEPNYPS IKSM++SHVSG FWLGLPSHFCK  LP  DGVMTLIDEDGDEYP IY
Sbjct: 115 QLQSGLEPNYPSFIKSMLQSHVSGGFWLGLPSHFCKNRLPNRDGVMTLIDEDGDEYPTIY 174

Query: 122 LARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 159
           LARKTG SGGWKGF++AHKL+DGDAV+FQ IKPT CK
Sbjct: 175 LARKTGLSGGWKGFAVAHKLADGDAVIFQFIKPTTCK 211

[Close]

BLAST of CsaV3_2G028010 vs. TrEMBL
Match: tr|A0A1S3BAR2|A0A1S3BAR2_CUCME (B3 domain-containing protein At5g42700-like OS=Cucumis melo OX=3656 GN=LOC103487903 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 4.8e-67
Identity = 125/155 (80.65%), Postives = 138/155 (89.03%), Query Frame = 0


Query: 4   QLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERALEL 63
           QLVVVRRSSRVAKQ  PVYAEV+++RV IPRRIS+ARD S + YASD ARK+AFERA +L
Sbjct: 57  QLVVVRRSSRVAKQSAPVYAEVVINRVVIPRRISKARDLSNRVYASDGARKRAFERAEQL 116

Query: 64  QSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPIIYLA 123
           QSGLEPNYPS IKSM++SHVSG FWLGLPSHFCK HLP  DGVMTLIDEDGDEYP IYLA
Sbjct: 117 QSGLEPNYPSFIKSMLQSHVSGGFWLGLPSHFCKIHLPNRDGVMTLIDEDGDEYPTIYLA 176

Query: 124 RKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 159
           RKTG SGGWKGF++AHKL+DGDAV+FQ IKPT CK
Sbjct: 177 RKTGLSGGWKGFAVAHKLADGDAVIFQFIKPTTCK 211

[Close]

BLAST of CsaV3_2G028010 vs. TrEMBL
Match: tr|A0A1U8KH99|A0A1U8KH99_GOSHI (B3 domain-containing protein At5g42700-like OS=Gossypium hirsutum OX=3635 GN=LOC107917037 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 3.8e-56
Identity = 107/158 (67.72%), Postives = 133/158 (84.18%), Query Frame = 0


Query: 1   MQKQLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERA 60
           ++KQLVVVRRSSRVA +P PVY EVLVD+V IPRR+S+ RD S + YASDEAR +A E+A
Sbjct: 56  VEKQLVVVRRSSRVANKPAPVYQEVLVDKVMIPRRVSKHRDLSNRVYASDEARAEALEKA 115

Query: 61  LELQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPII 120
            +L+SGL+P++P  IKSM++SHV+G FWLGLP HFCKT+LPK D VMTL+DE+G EYP I
Sbjct: 116 EKLESGLDPHFPVFIKSMLQSHVTGGFWLGLPVHFCKTNLPKRDEVMTLVDEEGHEYPTI 175

Query: 121 YLARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 159
           YLA+KTG SGGWKGF++AH+L DGDAVVFQ ++ T  K
Sbjct: 176 YLAKKTGLSGGWKGFAVAHRLVDGDAVVFQLLQRTTFK 213

[Close]

BLAST of CsaV3_2G028010 vs. TrEMBL
Match: tr|A0A0D2QCC6|A0A0D2QCC6_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G131600 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 5.0e-56
Identity = 106/158 (67.09%), Postives = 133/158 (84.18%), Query Frame = 0


Query: 1   MQKQLVVVRRSSRVAKQPTPVYAEVLVDRVAIPRRISRARDFSAQFYASDEARKKAFERA 60
           ++KQLVVVRRSSRVA +P PVY EVLVD+V IPRR+S+ RD S + YASDEAR +A E+A
Sbjct: 56  VEKQLVVVRRSSRVANKPAPVYQEVLVDKVMIPRRVSKHRDLSNRVYASDEARAEALEKA 115

Query: 61  LELQSGLEPNYPSCIKSMVRSHVSGCFWLGLPSHFCKTHLPKNDGVMTLIDEDGDEYPII 120
            +L+SGL+P++P  IKSM++SHV+G FWLGLP HFCKT+LPK D VMTL+DE+G EYP I
Sbjct: 116 EKLESGLDPHFPVFIKSMLQSHVTGGFWLGLPVHFCKTNLPKRDEVMTLVDEEGHEYPTI 175

Query: 121 YLARKTGFSGGWKGFSIAHKLSDGDAVVFQHIKPTACK 159
           YLA+KTG SGGWKGF++AH+L DGDA+VFQ ++ T  K
Sbjct: 176 YLAKKTGLSGGWKGFAVAHRLVDGDAIVFQLLQRTTFK 213

The following BLAST results are available for this feature:

BLAST of CsaV3_2G028010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649586.1	7.0e-86	100.00	PREDICTED: B3 domain-containing protein At3g19184-like [Cucumis sativus] >XP_011...	[more]
KGN62530.1	7.7e-85	100.00	hypothetical protein Csa_2G359985 [Cucumis sativus]	[more]
XP_022144315.1	6.3e-71	85.99	B3 domain-containing protein At5g42700-like [Momordica charantia]	[more]
XP_023538062.1	1.1e-70	84.18	B3 domain-containing protein At5g42700-like [Cucurbita pepo subsp. pepo]	[more]
XP_022951156.1	2.4e-70	83.54	B3 domain-containing protein At5g42700-like [Cucurbita moschata]	[more]

BLAST of CsaV3_2G028010 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19184.1	2.7e-39	55.26	AP2/B3-like transcriptional factor family protein	[more]
AT5G42700.1	1.5e-37	53.90	AP2/B3-like transcriptional factor family protein	[more]
AT5G58280.1	1.4e-27	40.00	AP2/B3-like transcriptional factor family protein	[more]

BLAST of CsaV3_2G028010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q1G3M3\|Y3918_ARATH	4.8e-38	55.26	B3 domain-containing protein At3g19184 OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
sp\|Q9FMZ4\|Y5270_ARATH	2.6e-36	53.90	B3 domain-containing protein At5g42700 OS=Arabidopsis thaliana OX=3702 GN=At5g42...	[more]
sp\|Q69V36\|Y6944_ORYSJ	2.1e-33	48.41	B3 domain-containing protein Os06g0194400 OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|Q10QS9\|Y3845_ORYSJ	4.7e-33	47.40	B3 domain-containing protein Os03g0184500 OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|Q5KQI4\|Y5814_ORYSJ	2.0e-31	48.00	B3 domain-containing protein Os05g0481400 OS=Oryza sativa subsp. japonica OX=399...	[more]

BLAST of CsaV3_2G028010 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LKX3\|A0A0A0LKX3_CUCSA	5.1e-85	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359985 PE=4 SV=1	[more]
tr\|A0A0A0LNH0\|A0A0A0LNH0_CUCSA	9.7e-68	80.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359980 PE=4 SV=1	[more]
tr\|A0A1S3BAR2\|A0A1S3BAR2_CUCME	4.8e-67	80.65	B3 domain-containing protein At5g42700-like OS=Cucumis melo OX=3656 GN=LOC103487...	[more]
tr\|A0A1U8KH99\|A0A1U8KH99_GOSHI	3.8e-56	67.72	B3 domain-containing protein At5g42700-like OS=Gossypium hirsutum OX=3635 GN=LOC...	[more]
tr\|A0A0D2QCC6\|A0A0D2QCC6_GOSRA	5.0e-56	67.09	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_002G131600 PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR015300	DNA-bd_pseudobarrel_sf
IPR003340	B3_DNA-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G028010.1	CsaV3_2G028010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 74..170 e-value: 5.3E-19 score: 79.1
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 75..153 e-value: 3.2E-12 score: 46.1
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 74..170 score: 9.389
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 72..155 e-value: 1.08005E-22 score: 87.3832
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	G3DSA:2.40.330.10		coord: 49..159 e-value: 2.2E-22 score: 81.0
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	SSF101936	DNA-binding pseudobarrel domain	coord: 68..155
None	No IPR available	PANTHER	PTHR31391	FAMILY NOT NAMED	coord: 2..158
None	No IPR available	PANTHER	PTHR31391:SF44	SUBFAMILY NOT NAMED	coord: 2..158

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G028010	Cucumber (Chinese Long) v3	cuccucB081
CsaV3_2G028010	Cucumber (Chinese Long) v3	cuccucB100
CsaV3_2G028010	Silver-seed gourd	carcucB0119
CsaV3_2G028010	Silver-seed gourd	carcucB0209
CsaV3_2G028010	Silver-seed gourd	carcucB0302
CsaV3_2G028010	Silver-seed gourd	carcucB0809
CsaV3_2G028010	Cucumber (Gy14) v2	cgybcucB065
CsaV3_2G028010	Cucumber (Gy14) v2	cgybcucB167
CsaV3_2G028010	Cucumber (Gy14) v1	cgycucB166
CsaV3_2G028010	Cucumber (Gy14) v1	cgycucB347
CsaV3_2G028010	Cucurbita maxima (Rimu)	cmacucB0015
CsaV3_2G028010	Cucurbita maxima (Rimu)	cmacucB0203
CsaV3_2G028010	Cucurbita maxima (Rimu)	cmacucB0524
CsaV3_2G028010	Cucurbita maxima (Rimu)	cmacucB0926
CsaV3_2G028010	Cucurbita moschata (Rifu)	cmocucB0004
CsaV3_2G028010	Cucurbita moschata (Rifu)	cmocucB0186
CsaV3_2G028010	Cucurbita moschata (Rifu)	cmocucB0510
CsaV3_2G028010	Cucurbita moschata (Rifu)	cmocucB0918
CsaV3_2G028010	Cucurbita pepo (Zucchini)	cpecucB0106
CsaV3_2G028010	Cucurbita pepo (Zucchini)	cpecucB0675
CsaV3_2G028010	Cucurbita pepo (Zucchini)	cpecucB0957
CsaV3_2G028010	Cucurbita pepo (Zucchini)	cpecucB1013
CsaV3_2G028010	Wild cucumber (PI 183967)	cpicucB081
CsaV3_2G028010	Wild cucumber (PI 183967)	cpicucB206
CsaV3_2G028010	Bottle gourd (USVL1VR-Ls)	cuclsiB129
CsaV3_2G028010	Bottle gourd (USVL1VR-Ls)	cuclsiB155
CsaV3_2G028010	Melon (DHL92) v3.5.1	cucmeB124
CsaV3_2G028010	Melon (DHL92) v3.5.1	cucmeB150
CsaV3_2G028010	Melon (DHL92) v3.6.1	cucmedB118
CsaV3_2G028010	Melon (DHL92) v3.6.1	cucmedB143
CsaV3_2G028010	Watermelon (Charleston Gray)	cucwcgB150
CsaV3_2G028010	Watermelon (Charleston Gray)	cucwcgB176
CsaV3_2G028010	Watermelon (97103) v1	cucwmB124
CsaV3_2G028010	Watermelon (97103) v1	cucwmB138
CsaV3_2G028010	Watermelon (97103) v1	cucwmB164
CsaV3_2G028010	Watermelon (97103) v2	cucwmbB137
CsaV3_2G028010	Watermelon (97103) v2	cucwmbB164
CsaV3_2G028010	Wax gourd	cucwgoB169
CsaV3_2G028010	Wax gourd	cucwgoB204