CsaV3_2G026120 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G026120
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2 : 17925788 .. 17926333 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAACAAGAACAAGAAGACCAGTGCATATTTTTGGACTTTTCCATCGAAAGAATACAAAAACTCAGGATCTAAACGTGATTTTGAAATGAAAACCCACCAACTTGAAAACTCTCACCCTTATCCCAGTCTCCTTCTTTCGATTTGGAGCCTGAAGAAATTGATCCTTCTTCATTCAAGTATATCCAGTGCAAAGCATTTGAGATTATTTTCGAGTCTGAGATCTGAGTCATCTGCTACCTTGACGTGGGCTTTTCCTATGCTTTTCTCTTTTTTTGTGTATGATGACATTATTAGTGCAGAAAGGTCCTTTGTCTATGTTGGAATGGACTTTGTACCTCTACCTGTAGGGGCAGAGTTCGCAGATGCCTATGGATTCCCTCAATTTACTCTCTCTCCATCGGTTTTGAGGTTTGATGGGTTCGGTTTTTCTTTATTCTTTTAATTAAAAAGTTCGTGGCTTTATAATTTATTAAAGTAACCTAGATGGCTGAAATTGTAAATTTATTCTCTACATACATTCAGCAGCAAAGACCTCGATTGA

mRNA sequence

ATGGGCAACAAGAACAAGAAGACCAGTGCATATTTTTGGACTTTTCCATCGAAAGAATACAAAAACTCAGGATCTAAACGTGATTTTGAAATGAAAACCCACCAACTTGAAAACTCTCACCCTTATCCCAGTCTCCTTCTTTCGATTTGGAGCCTGAAGAAATTGATCCTTCTTCATTCAAGTATATCCAGTGCAAAGCATTTGAGATTATTTTCGAGTCTGAGATCTGAGTCATCTGCTACCTTGACGTGGGCTTTTCCTATGCTTTTCTCTTTTTTTGTGTATGATGACATTATTAGTGCAGAAAGGTCCTTTGTCTATGTTGGAATGGACTTTGTACCTCTACCTGTAGGGGCAGAGTTCGCAGATGCCTATGGATTCCCTCAATTTACTCTCTCTCCATCGGTTTTGAGGTTTGATGGCAGCAAAGACCTCGATTGA

Coding sequence (CDS)

ATGGGCAACAAGAACAAGAAGACCAGTGCATATTTTTGGACTTTTCCATCGAAAGAATACAAAAACTCAGGATCTAAACGTGATTTTGAAATGAAAACCCACCAACTTGAAAACTCTCACCCTTATCCCAGTCTCCTTCTTTCGATTTGGAGCCTGAAGAAATTGATCCTTCTTCATTCAAGTATATCCAGTGCAAAGCATTTGAGATTATTTTCGAGTCTGAGATCTGAGTCATCTGCTACCTTGACGTGGGCTTTTCCTATGCTTTTCTCTTTTTTTGTGTATGATGACATTATTAGTGCAGAAAGGTCCTTTGTCTATGTTGGAATGGACTTTGTACCTCTACCTGTAGGGGCAGAGTTCGCAGATGCCTATGGATTCCCTCAATTTACTCTCTCTCCATCGGTTTTGAGGTTTGATGGCAGCAAAGACCTCGATTGA

Protein sequence

MGNKNKKTSAYFWTFPSKEYKNSGSKRDFEMKTHQLENSHPYPSLLLSIWSLKKLILLHSSISSAKHLRLFSSLRSESSATLTWAFPMLFSFFVYDDIISAERSFVYVGMDFVPLPVGAEFADAYGFPQFTLSPSVLRFDGSKDLD
Homology
[Close]
BLAST of CsaV3_2G026120 vs. NCBI nr
Match: KGN62446.1 (hypothetical protein Csa_2G354720 [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 2.0e-75
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MGNKNKKTSAYFWTFPSKEYKNSGSKRDFEMKTHQLENSHPYPSLLLSIWSLKKLILLHS 60
           MGNKNKKTSAYFWTFPSKEYKNSGSKRDFEMKTHQLENSHPYPSLLLSIWSLKKLILLHS
Sbjct: 1   MGNKNKKTSAYFWTFPSKEYKNSGSKRDFEMKTHQLENSHPYPSLLLSIWSLKKLILLHS 60

Query: 61  SISSAKHLRLFSSLRSESSATLTWAFPMLFSFFVYDDIISAERSFVYVGMDFVPLPVGAE 120
           SISSAKHLRLFSSLRSESSATLTWAFPMLFSFFVYDDIISAERSFVYVGMDFVPLPVGAE
Sbjct: 61  SISSAKHLRLFSSLRSESSATLTWAFPMLFSFFVYDDIISAERSFVYVGMDFVPLPVGAE 120

Query: 121 FADAYGFPQFTLSPSVLRFDGSKDLD 147
           FADAYGFPQFTLSPSVLRFDGSKDLD
Sbjct: 121 FADAYGFPQFTLSPSVLRFDGSKDLD 146

[Close]
BLAST of CsaV3_2G026120 vs. TrEMBL
Match: tr|A0A0A0LR42|A0A0A0LR42_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354720 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.3e-75
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MGNKNKKTSAYFWTFPSKEYKNSGSKRDFEMKTHQLENSHPYPSLLLSIWSLKKLILLHS 60
           MGNKNKKTSAYFWTFPSKEYKNSGSKRDFEMKTHQLENSHPYPSLLLSIWSLKKLILLHS
Sbjct: 1   MGNKNKKTSAYFWTFPSKEYKNSGSKRDFEMKTHQLENSHPYPSLLLSIWSLKKLILLHS 60

Query: 61  SISSAKHLRLFSSLRSESSATLTWAFPMLFSFFVYDDIISAERSFVYVGMDFVPLPVGAE 120
           SISSAKHLRLFSSLRSESSATLTWAFPMLFSFFVYDDIISAERSFVYVGMDFVPLPVGAE
Sbjct: 61  SISSAKHLRLFSSLRSESSATLTWAFPMLFSFFVYDDIISAERSFVYVGMDFVPLPVGAE 120

Query: 121 FADAYGFPQFTLSPSVLRFDGSKDLD 147
           FADAYGFPQFTLSPSVLRFDGSKDLD
Sbjct: 121 FADAYGFPQFTLSPSVLRFDGSKDLD 146

The following BLAST results are available for this feature:
BLAST of CsaV3_2G026120 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN62446.12.0e-75100.00hypothetical protein Csa_2G354720 [Cucumis sativus][more]
BLAST of CsaV3_2G026120 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G026120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G026120 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LR42|A0A0A0LR42_CUCSA1.3e-75100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354720 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G026120.1CsaV3_2G026120.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_2G026120CSPI02G18520Wild cucumber (PI 183967)cpicucB081
CsaV3_2G026120ClCG08G016500Watermelon (Charleston Gray)cucwcgB176
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G026120Cucumber (Chinese Long) v3cuccucB081
CsaV3_2G026120Cucumber (Chinese Long) v3cuccucB090
CsaV3_2G026120Cucumber (Chinese Long) v3cuccucB100
CsaV3_2G026120Silver-seed gourdcarcucB0001
CsaV3_2G026120Silver-seed gourdcarcucB0209
CsaV3_2G026120Silver-seed gourdcarcucB0351
CsaV3_2G026120Silver-seed gourdcarcucB0433
CsaV3_2G026120Silver-seed gourdcarcucB0487
CsaV3_2G026120Silver-seed gourdcarcucB0809
CsaV3_2G026120Cucumber (Gy14) v2cgybcucB065
CsaV3_2G026120Cucumber (Gy14) v2cgybcucB167
CsaV3_2G026120Cucumber (Gy14) v2cgybcucB262
CsaV3_2G026120Cucumber (Gy14) v1cgycucB117
CsaV3_2G026120Cucumber (Gy14) v1cgycucB336
CsaV3_2G026120Cucumber (Gy14) v1cgycucB535
CsaV3_2G026120Cucumber (Gy14) v1cgycucB596
CsaV3_2G026120Cucurbita maxima (Rimu)cmacucB0015
CsaV3_2G026120Cucurbita maxima (Rimu)cmacucB0128
CsaV3_2G026120Cucurbita maxima (Rimu)cmacucB0203
CsaV3_2G026120Cucurbita maxima (Rimu)cmacucB0524
CsaV3_2G026120Cucurbita maxima (Rimu)cmacucB0607
CsaV3_2G026120Cucurbita maxima (Rimu)cmacucB0778
CsaV3_2G026120Cucurbita maxima (Rimu)cmacucB0926
CsaV3_2G026120Cucurbita maxima (Rimu)cmacucB1006
CsaV3_2G026120Cucurbita moschata (Rifu)cmocucB0004
CsaV3_2G026120Cucurbita moschata (Rifu)cmocucB0121
CsaV3_2G026120Cucurbita moschata (Rifu)cmocucB0186
CsaV3_2G026120Cucurbita moschata (Rifu)cmocucB0369
CsaV3_2G026120Cucurbita moschata (Rifu)cmocucB0510
CsaV3_2G026120Cucurbita moschata (Rifu)cmocucB0763
CsaV3_2G026120Cucurbita moschata (Rifu)cmocucB0918
CsaV3_2G026120Cucurbita moschata (Rifu)cmocucB0990
CsaV3_2G026120Cucurbita pepo (Zucchini)cpecucB0064
CsaV3_2G026120Cucurbita pepo (Zucchini)cpecucB0106
CsaV3_2G026120Cucurbita pepo (Zucchini)cpecucB0245
CsaV3_2G026120Cucurbita pepo (Zucchini)cpecucB0591
CsaV3_2G026120Cucurbita pepo (Zucchini)cpecucB0675
CsaV3_2G026120Cucurbita pepo (Zucchini)cpecucB0957
CsaV3_2G026120Cucurbita pepo (Zucchini)cpecucB1013
CsaV3_2G026120Wild cucumber (PI 183967)cpicucB206
CsaV3_2G026120Wild cucumber (PI 183967)cpicucB327
CsaV3_2G026120Wild cucumber (PI 183967)cpicucB386
CsaV3_2G026120Bottle gourd (USVL1VR-Ls)cuclsiB113
CsaV3_2G026120Bottle gourd (USVL1VR-Ls)cuclsiB128
CsaV3_2G026120Bottle gourd (USVL1VR-Ls)cuclsiB129
CsaV3_2G026120Bottle gourd (USVL1VR-Ls)cuclsiB155
CsaV3_2G026120Melon (DHL92) v3.5.1cucmeB124
CsaV3_2G026120Melon (DHL92) v3.5.1cucmeB150
CsaV3_2G026120Melon (DHL92) v3.5.1cucmeB157
CsaV3_2G026120Melon (DHL92) v3.6.1cucmedB101
CsaV3_2G026120Melon (DHL92) v3.6.1cucmedB118
CsaV3_2G026120Melon (DHL92) v3.6.1cucmedB143
CsaV3_2G026120Melon (DHL92) v3.6.1cucmedB148
CsaV3_2G026120Watermelon (Charleston Gray)cucwcgB128
CsaV3_2G026120Watermelon (Charleston Gray)cucwcgB145
CsaV3_2G026120Watermelon (Charleston Gray)cucwcgB150
CsaV3_2G026120Watermelon (97103) v1cucwmB124
CsaV3_2G026120Watermelon (97103) v1cucwmB138
CsaV3_2G026120Watermelon (97103) v1cucwmB150
CsaV3_2G026120Watermelon (97103) v2cucwmbB102
CsaV3_2G026120Watermelon (97103) v2cucwmbB137
CsaV3_2G026120Watermelon (97103) v2cucwmbB164
CsaV3_2G026120Wax gourdcucwgoB169
CsaV3_2G026120Wax gourdcucwgoB194
CsaV3_2G026120Wax gourdcucwgoB204