CsaV3_2G021140 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G021140
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Zinc finger protein
Location	chr2 : 16112961 .. 16119532 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATGGGCGCTTGGATGTTTATTGGGCCAAATGTATATCGTTTTGTCGAGAATCTGCTGGTGGGTCTTCTTACTGGATTTTTATTTGTTCCCGAAGAATCTGTCCTTTTTTTGTACTCTTCATTTTCTTTCGAGTTTAATACGTTTTTTCTTTTGGAAAATGGGTGAATTTTGCAGTTAGGTTAGGGTAGGTTGAGGAATTGCGAACTGTTGTCTCTCGTTTTCCATTATGATCTGGATCCACTAAACTGATTGGAAGTGTTTAATTGACGATTGAAGGCGAAGGAATTTGAGGTCGGGTGAGTACTTTTTTAATAAGAATTGAGCATTTCCTTGAGATACATACAATTCCTTATGCTTTGAACTATGAAGATCTATCTTGTGTTTGATTTCTTTATGGGAGGAGTGGTGTTAAATTTCTGTTAATTTACCTGTCTGGCTCATTAGTCGAGAGTCTGGGTTCTCAAATCTGGATCAATGGTCTGAATTTTCATAGACCACGACGATAAATTGTGGTGATGTTTGATTTTTACAAGGAAAATTGTGGAAGCTCTTTGTGTTTCTTGACAAAAAAGGGACAATGATGATTCAGTTGTATGCATTTTATATCATCGAAATGGATAAGGGAAAAATTGTCTCGTCTGCACTATGATGCAAGAAACAGGTTTAAATCTTTCAGTTCAAGAGACAAGGGTTATAAATAATTAAATATGTATTGGCTTAGTTCATACTTTAGACTAGGGAAGCAAGGAAAATCTGAGGATCCTGAAACTTTCACGGTTCATGATTTGAAAATTTCTCTTAGAGGTCACAGGGTTACTTAAGAAATTTGTTTATAAACTCGGCATCTCTGCCTATGTTTGGAAAGTGGCGCTTCATGTGGCTCACTGGAGTATGCTCTCTGTTATGAGACATTTGAGAGGAGAAATACCAGAGTGTTTGGGGGGGGTGGTGGTCAATAAGGATCCAACTTCTAAGTAATCTTTCGTTTTCCGTGAAGTTTCATGTTTATCTTTAGATTTCATTTTTGAAGGCTTTTTGTAACTAAATGCTTGGTAACATTATTGTCAGTTGGAACTCATTTCTTTAGAGGGATCGTCTGTGGAGTGGTTTCTTTTGTATGCCTTTGTTCTTTCTCAATAAAAGAAATCATTTCTGTTAAAAAACTTATTTGCAATATGTTCTCCTTCTCCTATTGAAAATTAGGTCCTGATTTAAACTCAATTGTTAACTGGATTCATAATGGATATAACCGCTTTACAACTTCAGACAAATTTCACATGTATTATGTTATGTATGTGTCTTCACAAATTTTTTTCACTACAGCTGACCACCAGGCACCAACTAGTTTCTTTGCCAGTTTTATTCTGTGAAGCAGTTCAAATAAGAAGTTCACCGATTTTTGTTTTGGGACAAGTTCTGATGGCTCAACTAGATTGTGGGTTTCATTTGTGAAACTAGGCCGATTGTTTTAATTGCAGCATATATGAAACTTGTGGTGAGAATATTTGTTGAAATTTTGTGAATATTGATTTCTATTGTCAGTTGAAATGGTTTTCAGCATGTCTTTTTGTTTCTGATTCCAGGCTCCAGAGGATAAAAAAAGTGTATATGAATGTATGTATTGCACACACATGCTAAGTACTGGTTGTTCTCTGAAGATAGGGATAATTATTATGTCAGAACTTTCTGTTCTTTTTAGTAAGAGTACTGCTTGTTGGGCTTCTAAAAGAAATACTTGCTTCATCGTTGCAGGAAGGATTGAATCTACTGCTTCAGAGAAGATGGAGATGAATAAAAAAAGTTCTCATTCAAAAGAGAAACCGACTATGGGCCGTTCTTCATCTTCTAGTGAAGTGAAAAAGCCTGCTGAAAAAGACTTGAGCTCCCCACGTTTGTTAATCAGGGTAAGCAAGCATCTATTGAATTTGATAGGGATAAGCCACCTGTTTGTTAGTTTTTGGGGATTAGTATTTCTTTTGTGCTTGTATCATGTTTCCTATAACTGATGACCCCGTGGAGCTTGGAAGTTTGGAATAAATGCTCGAAGAGAAAAAGAAGACGCACAACTCGTTGTTTGGTTCTGTTCATGTGAATTGTTTTGAGGTTCTCTATTGCAATTTGTGTTTTCAGTTAATTTAGATGCTCCAATTTTACTCCCTCACTTGGGTAGCTCTGTGGTGGACTTGTATTTTCGCCATTTTGTTTGTGGGGGTATTTAGCTGGAGAGGAACAATATAAGATCTAAGAGAGATTGAGGGATTTAGAGGTGAGCATTGGGAGTTCCGTTAATACTTATTATTATTGTTTCTAATTTCCAGCTTGATCATTCTTTTAGATTGGAGTCCTTTCTTATAATTAGGGTTGGGGATTCTTTTGATGGGCTTGTTTGTTATATGCCCTTATATGTTTCCACATTTCTCCATGGAATCTCTGTTTCTTTAAAAATAATAAAAAATCCCAGTTTAATCTTAGAAGGTGTTGATATTGTTACACTTGCTTTCTTAACTGCGAAATGAAATGGTGACGGAATCATTGAATTGATCTGAGTTTTCTGAATTTGGTAAATGCGCGTGAATGCTAAAGGTGGAAGTCAGGCAAAACTGAAAGAAAGACTGAGGAAAATGGACCAGTAGTTATGGTTGGAGAAAGGAAGAGGTTTTGTGAGGGAATATGGAAATCTCAACACTGTATACTTTTATGTTTAATGGATTGAATTATTCAGACGACAAACCATGTTGCAAATATTGGTCTATCACTAATATACTATAAGAGTCTATTAACAATAGAAGTCTCACCGATAGAAATTGCTATATTTACAAATTTTTAAAATTGTTGCTATATACTAAGTATTATTCCTAAAATGGCTACTTATTATAGTCATCCAACTAAAGTAGAACATCTGGATGGGCTAGTAGGATATATCGGCCAAGTCCCAGCCCAAATAGATATTAGGAAGTTGGTTGATTCATGCGACAGCTGTACTTCTGACATCTAAATGTTCGTGTCCTTTTAAGGAATTTTTGTTTCTTCAAGCTTAGATTTCTTAAAATAGTGACGGTAACTTTTTCATCATTATGTTTGGTTTAAATATATATTCCCTGATCATAATAACCCACGTCTTTTTTTGTAGCTGCAATTTGTTGGCACGAGAGTAGAAAGAAGTGGGTCGATAAAAATTCTCAACAACAACAAAGAATGGAAAGGGAATCAATGATAAGGTGATATCTCAGTTGCAGAATAGTTTATCGTTCCATGTCATGCTTTTGCTTGCGAGTAGTTTAGTTGATAGAATCTGAAAGGAAGCTCATAATCATAATAAAATGGAGATTTCTGCACGTACAGTGAAAGTTGAACAAGAAATCTTACTGTGGTTATGAAGTTCAACGAAACACTAAAATAGTATTAAAGTGAACCCAGAAAAATAACAGCAAATTACTAACTTGAGCGTATAGAATTTAGGATCAAACCATGTCTGAATATATTACTAACTTGAGCGTATAGAATTTAAGCAAACCTTTTTAAAATGTCAAGGTACAAATTACTATGGGCACCCCAATGAAATTAGATAAATGGTTGAAATAAAAAAAATGTCCAGTAGTTCTTGAGTCATTAACTCTTTGGTGGGAGTAACTCTATTAGATAACATGGGGTTCTGTTAGGATCCCTCCTAACAAGAGCACTCAAGAACACAAAGAACAAACAAAAACACTAAATATAGAAATATATATTACCATATCAATGAAAAACTACAATATACCTCAGCACACTGTAAAGGTTGAGAATCGTCTCCCAAATTTTCCAAAGAAAATCCCGTAAAATTCTTCACACCCTTTGCCCTCAACCCACTCCCCCTGTTTATTACTAAAAGTCCTAAAAAACTCACTGTCTGATATGCTCATTCTAATAAGTAATAATCATACTAATATTCTCATAATAATCCTATTATTTTCCAAACTAGGGGCCTCACCAATTCCATCTCAAAAACTAATTGGTGATGGGAAGAGTAGCTCATCTATTTTTATAAAAATTGTAAGGCTTATTTTTTAATGTGGGATTATTCATGTGCTGCCTCAAGATGATGCCTCTTTGGGTACACCACTCTTGAATCATGTCCCAATTTTTGCTTTTTAGACTGGACTCAAACACTATAATAAATAATTTGAGGTTTCATCCATCTTGAGCTCTCTTGATTTTTTTAATGTGGTATCTTCCACAAACTTGTCCATAACCATATACCATAAATGATAAGAAACCCTTGGACATTGGATCTAAGAACCATGTTAAACAACAAGACTAGAAAGAACACAACCCCAGCAGCCACAAAATCATTTTGATTTCAACCCCTAAGAAATGCTAGATTCAAGTTACTTAGATGATCTAAGAAACCAAGGATCGGACAAAGTTTTGAAACTTCCATCAACCCTTGATCTTTGAAGCACTCCACAAACAAGACGGATCAATCCTCACTTGAATGCTCCAAATATTCATGCATTCTATCACAAGAACACACAAGAACAAAATTTTACATTTTAGAGTTTTTAGATTTCATCCCAAATTCTTCTTTAAATGTGGAAACTACAACTCTGTTTATACTAATTAAAATATGAAATGAAAGGTCACAACATTTAATTTTATATCCTTTCAACTACCAAAATAAATGAAAAAACATAAATACATAATTCCTTAAACATTTAATTTTATGACTTTTGAGTTGCTCAAATAACTCTTCAACTTCCAAGCATGACACCTCTTCAACTTCTTCATTTGATTCAATTCTGATTTCTTGATTCATATCACCGTAAGTCCCCATGACTAACAAATTAAGATGATTTGTAATTCTGAGTAGCTGGGACTCATCATTGTAAGTGAGGCAACAGGTTTTGCATTGTAAATGAAAGCGGTTGTTTATTAAAAACAAAAAGTTCATGCTGATCTCATCTTTTCCATTCTTGAAGGAAGACACCTTTTCCATTCTTTAATGAACAAATATTTGATCTCATCTGTTGCTTTTCTTTACTTTCTCCCTTTCCAATAAAGAAATATTCAATATGAACATAATCTAAGTGATGAACTGTTCACTTTAAATTTGCAGCTGGTCAACAGCATATGAAGATCTGCTCTCCACTAACGATCCCTTCAGTGAGCCAATACCTCTTCCGGTAAGCTTCTGAAAAGTTCATGCTGTTTTGTTATTGGTGATATATAATTTTTCCTTCAACCACAAGCTTAAACTTTTGGGTGAATTGGTAGTTTAATATGGTATCAGAGTAGGTGTTCATGCCTCTGCATTGTCGTTTCCTCCCAATTTAAATCGATTTTCACTTGTTGGCCTTTCAAATATTTCAAGTCCACAAGTGAGAGGGAGTGTTGGTGATATATAATTAAAATTGCCTTCAACCACAAGCTTTAAGCTTTTTGGTAAATTGGTAGTTTAATAGTTATATATACACACTATATTAGTCCATATGCTTGCTCAATAAATTGCTCGTTGATTCTTCTGTTGCTGTTGCACGTGTTCCTGGTTCTGATATGATAGGTACATCATTAGGAGAAAGTTCTTGAGGTATTATGGATATCTTAGGCCCTATTTAGTAACCTTTTTTTTTTAAAAAAAAAGGTGTGCATGTTTTCTCCTAATTTGTTACTCATGGTTTTCATATTTCCCATATAAACATTTGAACAATGCTGCTAGCGAGAAAGATATTAAGTCAAATTCATGCCTGAAGAAGGGAAATTCATCCCTCGTTGAGAAAACTCTCTCCAAAGATCACAAGTTATATATTTTCAAATTGATGACAAAAAAATTCTTATTACAACCTTAAATTAGGTATTTGTAGTTTTAAGCCTTTACAAGAAAATAAGACAATTAACTAATTAATTCTAAAATACAGTATAAGCAATTAAACACTAATTATTTCTAAAATATTGTATAAACAATTAAAGACAATTAATTAATTCTAAAATATAGTATAAACAATTAAAAACTAATTAATTCTAAAATATTGTATAAACAATTAAACACCAGTTAATGTAAATTAACATACGAACTAAAATACATGTCCTATAGTACTCAATCCAATTTTTAAAAACAAAAACAAGTATTTGAAACCTATTTTTTTAGTTGTCGAATTTTGGTTTTGATTTGAAAACACTCCTAAAATGTAGACAACAAAACATTGAAACCAATGGATAAAAGTGTTATTTATAGACTTAATGTTCAAAAACAAAAAAATACATCATCAAATGGTTACCAATAAAGCCCTGATAAGCAAGCTAATGAGTTTGTTGAGAGAGTGTTTGGGAGATTTTGTCTGGTAAATAGAGTGGGTTAGAATGGACTAAGTTAGACATTTTGATTAGACAGACTTCAGTGGCATCCACACGAAAACACGAAAACACGAAAACTCGAAAAGGGAGGTTCCAGAGTTCTTGGGAGACTTATATAGCAGCACATATCTCTTATATAACTATATATTTTAGGTTCTATCGGTTGATTTTCGAACTATGTTTAACGTTTTTTGATGCTTGTGACGTGGCTGGCAGGAGATGGTAGATTTCTTGGTTGA

mRNA sequence

ATGGAAATGGGCGCTTGGATGTTTATTGGGCCAAATGTATATCGTTTTGTCGAGAATCTGCTGGCGAAGGAATTTGAGGTCGGACTAGGGAAGCAAGGAAAATCTGAGGATCCTGAAACTTTCACGGTTCATGATTTGAAAATTTCTCTTAGAGGTCACAGGGCTCCAGAGGATAAAAAAAGTGTATATGAATGTATGTATTGCACACACATGCTAAGTACTGGTTGTTCTCTGAAGATAGGGATAATTATTATGTCAGAACTTTCTGTTCTTTTTAGTAAGAGTACTGCTTGTTGGGCTTCTAAAAGAAATACTTGCTTCATCGTTGCAGGAAGGATTGAATCTACTGCTTCAGAGAAGATGGAGATGAATAAAAAAAGTTCTCATTCAAAAGAGAAACCGACTATGGGCCGTTCTTCATCTTCTAGTGAAGTGAAAAAGCCTGCTGAAAAAGACTTGAGCTCCCCACCTGCAATTTGTTGGCACGAGAGTAGAAAGAAGTGGGTCGATAAAAATTCTCAACAACAACAAAGAATGGAAAGGGAATCAATGATAAGCTGGTCAACAGCATATGAAGATCTGCTCTCCACTAACGATCCCTTCAGTGAGCCAATACCTCTTCCGTCCATATGCTTGCTCAATAAATTGCTCGTTGATTCTTCTGTTGCTGTTGCACGTGTTCCTGGTTCTGATATGATAGGAGATGGTAGATTTCTTGGTTGA

Coding sequence (CDS)

ATGGAAATGGGCGCTTGGATGTTTATTGGGCCAAATGTATATCGTTTTGTCGAGAATCTGCTGGCGAAGGAATTTGAGGTCGGACTAGGGAAGCAAGGAAAATCTGAGGATCCTGAAACTTTCACGGTTCATGATTTGAAAATTTCTCTTAGAGGTCACAGGGCTCCAGAGGATAAAAAAAGTGTATATGAATGTATGTATTGCACACACATGCTAAGTACTGGTTGTTCTCTGAAGATAGGGATAATTATTATGTCAGAACTTTCTGTTCTTTTTAGTAAGAGTACTGCTTGTTGGGCTTCTAAAAGAAATACTTGCTTCATCGTTGCAGGAAGGATTGAATCTACTGCTTCAGAGAAGATGGAGATGAATAAAAAAAGTTCTCATTCAAAAGAGAAACCGACTATGGGCCGTTCTTCATCTTCTAGTGAAGTGAAAAAGCCTGCTGAAAAAGACTTGAGCTCCCCACCTGCAATTTGTTGGCACGAGAGTAGAAAGAAGTGGGTCGATAAAAATTCTCAACAACAACAAAGAATGGAAAGGGAATCAATGATAAGCTGGTCAACAGCATATGAAGATCTGCTCTCCACTAACGATCCCTTCAGTGAGCCAATACCTCTTCCGTCCATATGCTTGCTCAATAAATTGCTCGTTGATTCTTCTGTTGCTGTTGCACGTGTTCCTGGTTCTGATATGATAGGAGATGGTAGATTTCTTGGTTGA

Protein sequence

MEMGAWMFIGPNVYRFVENLLAKEFEVGLGKQGKSEDPETFTVHDLKISLRGHRAPEDKKSVYECMYCTHMLSTGCSLKIGIIIMSELSVLFSKSTACWASKRNTCFIVAGRIESTASEKMEMNKKSSHSKEKPTMGRSSSSSEVKKPAEKDLSSPPAICWHESRKKWVDKNSQQQQRMERESMISWSTAYEDLLSTNDPFSEPIPLPSICLLNKLLVDSSVAVARVPGSDMIGDGRFLG

Homology

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BLAST of CsaV3_2G021140 vs. NCBI nr
Match: XP_011649416.1 (PREDICTED: uncharacterized protein LOC101206806 [Cucumis sativus] >XP_011649417.1 PREDICTED: uncharacterized protein LOC101206806 [Cucumis sativus] >XP_011649418.1 PREDICTED: uncharacterized protein LOC101206806 [Cucumis sativus] >XP_011649419.1 PREDICTED: uncharacterized protein LOC101206806 [Cucumis sativus] >XP_011649420.1 PREDICTED: uncharacterized protein LOC101206806 [Cucumis sativus] >XP_011649421.1 PREDICTED: uncharacterized protein LOC101206806 [Cucumis sativus] >XP_011649422.1 PREDICTED: uncharacterized protein LOC101206806 [Cucumis sativus] >XP_011649423.1 PREDICTED: uncharacterized protein LOC101206806 [Cucumis sativus] >KGN62188.1 hypothetical protein Csa_2G324430 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 4.6e-29
Identity = 72/95 (75.79%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 121 MEMNKKSSHSKXXXXXXXXXXXXXXXKPAEKDLSSP-----PAICWHESRKKWVDKNSQQ 180
           MEMNKKSSHSK               KPAEKDLSSP      AICWHESRKKWVDKNSQQ
Sbjct: 1   MEMNKKSSHSKEKPTMGRSSSSSEVKKPAEKDLSSPTFVNQAAICWHESRKKWVDKNSQQ 60

Query: 181 QQRMERESMISWSTAYEDLLSTNDPFSEPIPLPSI 211
           QQRMERESMISWSTAYEDLLSTNDPFSEPIPLP +
Sbjct: 61  QQRMERESMISWSTAYEDLLSTNDPFSEPIPLPEM 95

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BLAST of CsaV3_2G021140 vs. NCBI nr
Match: XP_022134091.1 (uncharacterized protein LOC111006447 [Momordica charantia])

HSP 1 Score: 124.0 bits (310), Expect = 6.8e-25
Identity = 67/105 (63.81%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 111 GRIESTASEKMEMNKKSSHSKXXXXXXXXXXXXXXXKPAEKDLSS-----PPAICWHESR 170
           GR ES +S+K+EM+K SS+SK               KPAEKDLSS       AI WHESR
Sbjct: 9   GRNESISSDKIEMSKVSSYSKEKPNTGHFSSSSEVKKPAEKDLSSSTFVNQAAIRWHESR 68

Query: 171 KKWVDKNSQQQQRMERESMISWSTAYEDLLSTNDPFSEPIPLPSI 211
           KKW++K SQQQQRMERES+ISWSTAYEDLLSTN+PFSEPIPLP +
Sbjct: 69  KKWINKQSQQQQRMERESIISWSTAYEDLLSTNEPFSEPIPLPEM 113

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BLAST of CsaV3_2G021140 vs. NCBI nr
Match: XP_022938468.1 (uncharacterized protein LOC111444696 isoform X2 [Cucurbita moschata])

HSP 1 Score: 117.1 bits (292), Expect = 8.4e-23
Identity = 68/104 (65.38%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 111 GRIESTASEKMEMNKKSSHSKXXXXXXXXXXXXXXXKPAEKDLSS-----PPAICWHESR 170
           GR ES +SEK+EM+K+SSH+K               KPAEKDLSS       AI WHESR
Sbjct: 6   GRNESISSEKLEMSKESSHTK-EKTTIGRSSSSEVRKPAEKDLSSSTFVNQAAIRWHESR 65

Query: 171 KKWVD-KNSQQQQRMERESMISWSTAYEDLLSTNDPFSEPIPLP 209
           KKWVD K SQQQQRMER+S+ISWSTAYEDLLST +PFSEPIPLP
Sbjct: 66  KKWVDTKQSQQQQRMERDSIISWSTAYEDLLSTYEPFSEPIPLP 108

[Close]

BLAST of CsaV3_2G021140 vs. NCBI nr
Match: XP_022938467.1 (uncharacterized protein LOC111444696 isoform X1 [Cucurbita moschata])

HSP 1 Score: 117.1 bits (292), Expect = 8.4e-23
Identity = 68/106 (64.15%), Postives = 77/106 (72.64%), Query Frame = 0


Query: 111 GRIESTASEKMEMNKKSSHSKXXXXXXXXXXXXXXXKPAEKDLSS-----PPAICWHESR 170
           GR ES +SEK+EM+K+SSH+K               KPAEKDLSS       AI WHESR
Sbjct: 6   GRNESISSEKLEMSKESSHTK-EKTTIGRSSSSEVRKPAEKDLSSSTFVNQAAIRWHESR 65

Query: 171 KKWVD-KNSQQQQRMERESMISWSTAYEDLLSTNDPFSEPIPLPSI 211
           KKWVD K SQQQQRMER+S+ISWSTAYEDLLST +PFSEPIPLP +
Sbjct: 66  KKWVDTKQSQQQQRMERDSIISWSTAYEDLLSTYEPFSEPIPLPEM 110

[Close]

BLAST of CsaV3_2G021140 vs. NCBI nr
Match: XP_022993761.1 (uncharacterized protein LOC111489671 [Cucurbita maxima])

HSP 1 Score: 117.1 bits (292), Expect = 8.4e-23
Identity = 68/110 (61.82%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 107 FIVAGRIESTASEKMEMNKKSSHSKXXXXXXXXXXXXXXXKPAEKDLSS-----PPAICW 166
           F + GR ES +SEK+EM+K+SSH+K               KPAEK+LSS       AI W
Sbjct: 2   FPLRGRNESISSEKLEMSKESSHTK-EKTTIGRSSSSEVKKPAEKELSSSTFVNQAAIRW 61

Query: 167 HESRKKWVD-KNSQQQQRMERESMISWSTAYEDLLSTNDPFSEPIPLPSI 211
           HESRKKWVD K SQQQQRMER+S+ISWSTAYEDLLST +PFSEPIPLP +
Sbjct: 62  HESRKKWVDTKQSQQQQRMERDSIISWSTAYEDLLSTYEPFSEPIPLPEM 110

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BLAST of CsaV3_2G021140 vs. TAIR10
Match: AT3G54880.1 (unknown protein)

HSP 1 Score: 65.1 bits (157), Expect = 6.8e-11
Identity = 28/50 (56.00%), Postives = 39/50 (78.00%), Query Frame = 0


Query: 161 WHESRKKWVDKNSQQQQRMERESMISWSTAYEDLLSTNDPFSEPIPLPSI 211
           W E+R+KWV   S+Q++   ++ +ISWST YEDLLST++PFSE IPLP +
Sbjct: 48  WQENREKWVGDQSRQRKNTAKDQIISWSTTYEDLLSTHEPFSESIPLPEM 97

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BLAST of CsaV3_2G021140 vs. TAIR10
Match: AT5G03440.1 (unknown protein)

HSP 1 Score: 53.5 bits (127), Expect = 2.1e-07
Identity = 26/61 (42.62%), Postives = 37/61 (60.66%), Query Frame = 0


Query: 147 KPAEKDLSSPPAICWHESRKKWVDKNSQQQQRMERESMISWSTAYEDLLSTNDPFSEPIP 206
           K +E+   +   I W E RKKWV   S +   M  E +I ++  YEDLL++N PF++PIP
Sbjct: 20  KSSEEIFVNHAEIAWQEMRKKWVGDPSNRTSEMPDEPVIGFNATYEDLLTSNTPFNKPIP 79

Query: 207 L 208
           L
Sbjct: 80  L 80

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BLAST of CsaV3_2G021140 vs. TAIR10
Match: AT4G32342.1 (unknown protein)

HSP 1 Score: 42.0 bits (97), Expect = 6.2e-04
Identity = 21/49 (42.86%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 159 ICWHESRKKWVDKNSQQQQRMERESMISWSTAYEDLLSTNDPFSEPIPL 208
           I W+ +R++W +  + +QQ +  E  ISW++ Y+ LLSTN  F +PIPL
Sbjct: 96  ILWNHTRQQWRECLT-RQQCLVPEPAISWNSTYDSLLSTNKLFPQPIPL 143

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BLAST of CsaV3_2G021140 vs. TrEMBL
Match: tr|A0A0A0LK63|A0A0A0LK63_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G324430 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 3.0e-29
Identity = 72/95 (75.79%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 121 MEMNKKSSHSKXXXXXXXXXXXXXXXKPAEKDLSSP-----PAICWHESRKKWVDKNSQQ 180
           MEMNKKSSHSK               KPAEKDLSSP      AICWHESRKKWVDKNSQQ
Sbjct: 1   MEMNKKSSHSKEKPTMGRSSSSSEVKKPAEKDLSSPTFVNQAAICWHESRKKWVDKNSQQ 60

Query: 181 QQRMERESMISWSTAYEDLLSTNDPFSEPIPLPSI 211
           QQRMERESMISWSTAYEDLLSTNDPFSEPIPLP +
Sbjct: 61  QQRMERESMISWSTAYEDLLSTNDPFSEPIPLPEM 95

[Close]

BLAST of CsaV3_2G021140 vs. TrEMBL
Match: tr|A0A1Q3AYV9|A0A1Q3AYV9_CEPFO (DUF4050 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_04271 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 4.7e-14
Identity = 52/117 (44.44%), Postives = 69/117 (58.97%), Query Frame = 0


Query: 102 KRNTCFIV---AGRIESTASEKMEMNKKSSHSKXXXXXXXXXXXXXXXKPAEKDLSSP-- 161
           KRNTC  +    G+  S+ SE ME++   SHS                +P EKD ++   
Sbjct: 46  KRNTCQQLPCQCGKEWSSNSESMEID-TGSHSNEQRPLECSTSANEGKEPTEKDKNTSLF 105

Query: 162 ---PAICWHESRKKWVDKNSQQQQRMERESMISWSTAYEDLLSTNDPFSEPIPLPSI 211
               AI WHE+R+ WV   SQ+ QRM ++ +ISWST YE+LLSTN+PFSEPIPLP +
Sbjct: 106 VNHAAISWHENRRSWVGDVSQRPQRMAKDPIISWSTTYEELLSTNEPFSEPIPLPEM 161

[Close]

BLAST of CsaV3_2G021140 vs. TrEMBL
Match: tr|A0A1U8KDC7|A0A1U8KDC7_GOSHI (uncharacterized protein LOC107915799 OS=Gossypium hirsutum OX=3635 GN=LOC107915799 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.2e-12
Identity = 43/95 (45.26%), Postives = 57/95 (60.00%), Query Frame = 0


Query: 121 MEMNKKSSHSKXXXXXXXXXXXXXXXKPAEKDLSSP-----PAICWHESRKKWVDKNSQQ 180
           ME+N   S S                KPAEKD S+       AI WHE+R+KW    SQ+
Sbjct: 2   MEVNAGYSRSNEKQLPECRKSADKGKKPAEKDASASAFVNHAAISWHENRRKWTGDKSQK 61

Query: 181 QQRMERESMISWSTAYEDLLSTNDPFSEPIPLPSI 211
            +++ ++ +ISWST YE+LLSTN+PFSEPIPLP +
Sbjct: 62  ARKISKDQVISWSTTYEELLSTNEPFSEPIPLPEM 96

[Close]

BLAST of CsaV3_2G021140 vs. TrEMBL
Match: tr|A0A1U8MA57|A0A1U8MA57_GOSHI (uncharacterized protein LOC107934552 OS=Gossypium hirsutum OX=3635 GN=LOC107934552 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.2e-12
Identity = 43/95 (45.26%), Postives = 56/95 (58.95%), Query Frame = 0


Query: 121 MEMNKKSSHSKXXXXXXXXXXXXXXXKPAEKDLSSP-----PAICWHESRKKWVDKNSQQ 180
           ME+N   S S                KP EKD S+       AI WHE+R+KW    SQ+
Sbjct: 2   MEVNAGYSRSNEKQLPECRKSVDKEKKPVEKDASASAFVNHAAISWHENRRKWTGDKSQK 61

Query: 181 QQRMERESMISWSTAYEDLLSTNDPFSEPIPLPSI 211
            +++ ++ +ISWST YE+LLSTNDPFSEPIPLP +
Sbjct: 62  ARKISKDQVISWSTTYEELLSTNDPFSEPIPLPEM 96

[Close]

BLAST of CsaV3_2G021140 vs. TrEMBL
Match: tr|A0A0D2UWI4|A0A0D2UWI4_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G235700 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.2e-12
Identity = 43/95 (45.26%), Postives = 57/95 (60.00%), Query Frame = 0


Query: 121 MEMNKKSSHSKXXXXXXXXXXXXXXXKPAEKDLSSP-----PAICWHESRKKWVDKNSQQ 180
           ME+N   S S                KPAEKD S+       AI WHE+R+KW    SQ+
Sbjct: 2   MEVNAGYSRSNEKQLPECRKSADKGKKPAEKDASASAFVNHAAISWHENRRKWTGDKSQK 61

Query: 181 QQRMERESMISWSTAYEDLLSTNDPFSEPIPLPSI 211
            +++ ++ +ISWST YE+LLSTN+PFSEPIPLP +
Sbjct: 62  ARKISKDQVISWSTTYEELLSTNEPFSEPIPLPEM 96

The following BLAST results are available for this feature:

BLAST of CsaV3_2G021140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649416.1	4.6e-29	75.79	PREDICTED: uncharacterized protein LOC101206806 [Cucumis sativus] >XP_011649417....	[more]
XP_022134091.1	6.8e-25	63.81	uncharacterized protein LOC111006447 [Momordica charantia]	[more]
XP_022938468.1	8.4e-23	65.38	uncharacterized protein LOC111444696 isoform X2 [Cucurbita moschata]	[more]
XP_022938467.1	8.4e-23	64.15	uncharacterized protein LOC111444696 isoform X1 [Cucurbita moschata]	[more]
XP_022993761.1	8.4e-23	61.82	uncharacterized protein LOC111489671 [Cucurbita maxima]	[more]

BLAST of CsaV3_2G021140 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54880.1	6.8e-11	56.00	unknown protein	[more]
AT5G03440.1	2.1e-07	42.62	unknown protein	[more]
AT4G32342.1	6.2e-04	42.86	unknown protein	[more]

BLAST of CsaV3_2G021140 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_2G021140 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LK63\|A0A0A0LK63_CUCSA	3.0e-29	75.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G324430 PE=4 SV=1	[more]
tr\|A0A1Q3AYV9\|A0A1Q3AYV9_CEPFO	4.7e-14	44.44	DUF4050 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_...	[more]
tr\|A0A1U8KDC7\|A0A1U8KDC7_GOSHI	1.2e-12	45.26	uncharacterized protein LOC107915799 OS=Gossypium hirsutum OX=3635 GN=LOC1079157...	[more]
tr\|A0A1U8MA57\|A0A1U8MA57_GOSHI	1.2e-12	45.26	uncharacterized protein LOC107934552 OS=Gossypium hirsutum OX=3635 GN=LOC1079345...	[more]
tr\|A0A0D2UWI4\|A0A0D2UWI4_GOSRA	1.2e-12	45.26	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_011G235700 PE=4 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G021140.1	CsaV3_2G021140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..155
None	No IPR available	PANTHER	PTHR33373:SF2	SUBFAMILY NOT NAMED	coord: 121..210
None	No IPR available	PANTHER	PTHR33373	FAMILY NOT NAMED	coord: 121..210

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G021140	Cucsa.317350	Cucumber (Gy14) v1	cgycucB493
CsaV3_2G021140	CmaCh15G005020	Cucurbita maxima (Rimu)	cmacucB0327
CsaV3_2G021140	CmoCh15G005110	Cucurbita moschata (Rifu)	cmocucB0322
CsaV3_2G021140	CmoCh04G026710	Cucurbita moschata (Rifu)	cmocucB0809
CsaV3_2G021140	Cp4.1LG01g24710	Cucurbita pepo (Zucchini)	cpecucB0479
CsaV3_2G021140	Cp4.1LG13g10230	Cucurbita pepo (Zucchini)	cpecucB0196
CsaV3_2G021140	CsGy2G016340	Cucumber (Gy14) v2	cgybcucB064
CsaV3_2G021140	Carg04582	Silver-seed gourd	carcucB0721
CsaV3_2G021140	Carg01694	Silver-seed gourd	carcucB0864
CsaV3_2G021140	MELO3C019831	Melon (DHL92) v3.5.1	cucmeB123
CsaV3_2G021140	ClCG08G007770	Watermelon (Charleston Gray)	cucwcgB178
CsaV3_2G021140	Lsi08G006940	Bottle gourd (USVL1VR-Ls)	cuclsiB153
CsaV3_2G021140	MELO3C019831.2	Melon (DHL92) v3.6.1	cucmedB117
CsaV3_2G021140	Cla97C08G150550	Watermelon (97103) v2	cucwmbB166
CsaV3_2G021140	Bhi04G001060	Wax gourd	cucwgoB166

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_2G021140	CsaV3_2G020880	Cucumber (Chinese Long) v3	cuccucB066

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G021140	Watermelon (97103) v1	cucwmB126
CsaV3_2G021140	Cucurbita maxima (Rimu)	cmacucB0825