CsaV3_2G019650 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G019650
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Vesicle transport protein
Location	chr2 : 15617598 .. 15628249 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTTTTATTACAATAATTTGTGATGATAATCAAAATACTAACGAGAGACGGACACACAGTAACGGAGGCGCACCTCAAAATCAGCGTACGGCTGCGGTGGACCCTGACGGCGACGGGTGGAACGGGTTGCTGGTGGCAAGTTTTTGCTTCAATCAGCTCAACTATCCATTTTGTATCTTCCTTTGCCTTAGATCTCTCTCAATTTCCCCTCTTCTTCCCAGATTTTGAAGCGACGGCGGCCGAGTCATGGAGAAGATGAATCAGGCGTTTGAGAAAATGAAAATGTTAGTAGGAGTTGAGGTGGACGACGAACGTGAAGCTTCTACTGCTACCATCGACGACGGTAGCTCTTCATGGTTTATGGACGATTTCAATCGCAATTGCACGCTGTCTACGAAACAGGTTATTTTTCTTTCCCCCCCCCCTGCGAATTTTGATTCTCTCGTTGCTAAATATACTGCAGGAAAGTAACATTTTGTTCTCTGTATTTGTCATTCTTTCTATTTTATGTATACCCGGTATTGCAGCTTCGAATTATATTTGGCGTTTCTGATTTTGATTTCTGAAAGATGGGCTAACACAACGAATTAGGATTATACTTTGAGAAGGAAAATGTTTTGAAGGATCGTCATCATTATTATTTATTTATTTTTGAAGAGGAAACTGACACTTTTTATTGAAGGGGTGAAGAGAGGCTAAGGTTCAAAATACAAGATACCAAAATGAAATACAATGATAACAAAGTAGAACATAAATTAACGAAGTTCAACAAGCAAATACAAAAGGCAACATAAACATTAAGTTGGAAAAATTATTGCATTCCAATTTAAGTACAGATCTTGAATGGAAATATCCGCAAAAGACTTAGAAAGAGTGCAACGGGAGGAAGACTAATCTGAACAATGACAAAACGGTCCATCCAAGCAAGAGATTCATCTATCATGAAAGACCCTCTAATTCTTTCAAACCAAATTTCAACAAACAAAGCTTTAACCACAATAGATCAAATCATCTAAGGGACTTCAAAGTTGGACCAACCAAAATCCAAACCACATTTGCTGTAAACACTCACTAAATACCCAACCGAATTTGAAGGAGAATAAATGCCATCAGCATCCAAAGAAAAGGTGCTGCAAGTTTTCACGGTCTGCCATTCGCCCATACACAGGGGACATATAGAGGTAGACAAGCTTTGAGAAGGGAGTTTCCTTTAAATAATTGAAGAGCAATTCAATGGACCAAAAATCATTATCCATATGAGAATATTAACACGTCTGTGGTTCTTTGACATCCATAATGCTTTATAAATCGACTTATCCAAAGGATATGAAGTAGTCTAGTGCTCAGAAAGAGACTTTTAAGCCTTATTTTTCTGTAATATGTTGGTTATCTTCGGCATTGTGCAACGATTCTTACATTTGTTTCTTGTACTTTTAGCATTAGCCTTTTTTTCTTCAATTTTTTATGATTTCATTGAAGAGGTATTGCAGTAGACAACAACTTTTCTTCTTCTACATTCACTCCGCACAAAGCAAAATTTGCCCACTCTACCTTCTGATCCGAGCACCATTCAAATATCTCAATAGTTTTTTTCAAGTTATCCAACATACCATCATCATACTTTCAAAAAATGAGAGTATTGTCAGCAAATTGAAGATTGATTCATGAATTTTCTCTTTGCCCACTACGAAGCCTTCAAATATCCCTTTCTCATGTATGTAGCAGTAAGCATGCTCAACACCTCACTTTTGGTCTTCTATTAATAAAAATTGAATATCTTGGGTTCCTAACACCATCTAGTAAACAGACCTGAATTTTTCTTGTACTTTTCTGTTTGGTTTAGTTTGTGGCGTCACGAGTTAAGTATTTTTCTTTTGTCACACAGTTCTTTGTGGATTTAATAAAGTTGGACTTCTATACACAATTGTCCTTTGGAAAATTCCACATTTGATCAGAAGACCTTTTTTTGTATTAGCTGTTTGTGCGGGGGCTGATGGCTGGATGAAAGGAAAAAAACTTTGGACCAATTGATCCACAATCTGATTTTCTCAGCATATGCCAATTTGTCCCCTTTTCAATTTATCTTTCTGTATTCAAAGTTGAGTTTCTAATATTGTTCACCTATTGGAAACTGTATCCTACTAATCCATCCCTCTCCCTTTCTCAATTTTACAGCGATTTTATGGTTTTGCCATATGCTTTGTTGCTGGTGTAACGTGTACATTGATGGTAAGTATCCTTGAAATGAATGTTGATATCACCTTTCTGTCTATCAAGTCTTTATTAATTTCAAAATTTTCATTTACAAATACTAACCCACAAGTGTAATGTTGACTCATAATAGAAGGTGGTCTTTTCAATTGTAATGCAACTATTAGTGTAAGTCGGAGATGGTATCATCTACCTTTGTTAATATGTTGCTATTTGCTAATTTGTTTTAACATTTCAAAGTGCATGGAGGTTGTCTTTGTCTAAGTTGCATGTAGCACATAATCACAAATAGAGGTTGTGTATTTATAGGACAGCTGACTGATGCATGTCTCCTACCTTCATAAAGGTTTTGAAGATTGGTTATATGAAGAAGTGTGAGCCCAGGAGCTACTAAAGGTTCCTCAGTTGGCTTAATTCAAAAGGGAAGAAATATTAAAAATGATTTTTGATACGGAACTTCATATAGTGGTTAAGAAAAACATTTATGGGTTTCATCCACACTTGGAGTACTCTTCAAAGTCATGACTGCTTCTTTCATACATAGCAACCCATTTTTGTCTCCCCTAAAAGGTCTATGAGAGACATAAGTAAATGATGGTGAACTTTAAGAAAAATGCTCTCTCCTCTTTCCTCTCTCTTCTACACCCCCACTGTTGACAACATTTTTCTATGTATGACCCCCTTACTGTTAATAAGAATTTTCAATTTTTTTGTATAAAATTATTAATATTTAAATGGAAACAACACTTTTCATTGATGAAATAAAAAGTGCACACTGCTCAAATTACAATGAGACAAAAAAGGCCTAAAAACGGATTTTCAAACTCAGTCCACAGTTATAAATTCCTTGTATCTATATGCTCATACAATAGAACTCAATCCCTTTTAGGAGTTTGTTTTCCTTGAACATTTGACGTATCTTTCACTATAAAGTTGTTTCTTGTTTATTTGTGTTTTTTTTAAGTACTCACACAGATGTAGATGCTAGGAGTTCTATTCTTCGTTTAGTTTTCAGGTTCAAGGAAAAGTTTCTTTAAGCTGATATATTCAAAACTTTCTTCTTTGAGTTCTAAAGTTTGATATCCTCAACACTTGCTCAGGACAGAATTGATTGTCTTCTTGTAAGCACTGATTTGCATCTTATTTGTCTGTATGCAACAGTCAATGCTTGTTTTCTTCAATCCAATCAAATTTGGAATAGCTTTCACATTGGGCAACATGCTATCACTTGGAAGGTTTGTGTTTATATGTTTTTCTACATTCTGATTAATGCTTATTGATAGGCTTTTTTTATAAGCTTTACTTAGCATATTGCAGGTATCCTATCTTTGGTTTCAGTGACTAGTTTTTGCTCTTGGTCGGAAGTTGTTTCTAATCTTAAAAATTGTTGTCCAAAATTGCAGTCAGCTAAATATGAGCTAGATCCTATTCGTCTGATTGATATGCTTAACTTTTTAAGAAATAGAAACAATTCATTGATAGAATGAAATAATGGGCAGAGCCCAACACAACCGAAGGTGCTTACATGAAAGAATGCTGATGAGTGACTAGATAAGAAAGACTTAAAAGCTTAAAAGGGTTCTTATATTTGCACCAGAACAAAGCAGTAGAGATAACCACATCCATGAAAAGTTCAAAACTGGAGTAATCATCTCGAAAGAGGCATTTATTGCGTTCCCCCCTAAGAATCCAATCTAAAGCCCGAGTGACGGCCAGCCACAAAGTTTTCTTATGTTCATGGATAACCAACCAGTAGAGAAGACAGGTTGATATGCTTAGTTGGTCTGGTCAGTTTTCACAGTGCCAGTTGTTCGGTAATTGGTTGGTTGGGTGGTAAGTTGTTAGGCTTTGACTGCTGGTTCATGTAATTGGTGAGTATGGTACTCCCAAGAATTCAGGAAAGTCCTAGTGGCTGATGCAGTGATGGTCATAAGAAGACTTCAACCTAGCCACGTACCAAACTTTCTCACCCTATCTCTCAACCTCTCCAAAAATTCTATAATTTGAATCTAAATCTCCCACAAAGTTGCAAATGAGCTAGCCTGACAAGAAACTTTGCGCTTCCCCAAGCTAATTCTAAAACGAACCCTCAGTGATGGATCTGAGTTACGTAGGTCCAGCATAGCTAGCTAACTCTTCTTTACTCGGTCTAGGGCTTAAGAGTTAGGTGTTTTATATGTTCAAGATTGCAAGCTAGCTCAAAAAAGTGGGTGAAGGCCGTTGGAATTCTACCTGTGTGTCATCCAACTCTTTTGGTCCAAACTCAGTTCAACGACATTTCCACGAAGGTAAGGTAGTTAGTGTCTTCACAGGGGTGGTTCAATAAGGTGAGGAACAACTTCAGGATCAAAATAAAGGAAAAAGATTACTTTCTTGGTCTCTGAGTGGTCAATTATAGGTCCATTTGGTCCCAAAGTTTTTTTAGTAAACAATAATAACGAGAATCACATCTTTCGTTGAGAAAGAATGAAAGAATACACGAACATGCAAAAAAAATAAAAAATCAAGCCCACAAAAGGAATGTTCCACTACATCATGTATGCTTAATTCAGTACACCCATTTACACCCAATTCTTGTTTTTTGACTTGGTAAGGGAGTTAAAACCCAAGTTCCTTGTTTTATCAAAGCATTGTGTTCCCTTTGCATCTTGCCAAACTCCAACCTTGGATGCTTTGACAAAGTGGTTTTTTCCTCTCTCTCTAAGTTTGATATTTTTTGTGGCAGCACAGCATTTCTCATAGGCCCCAAAAGGCAAGTGACTATGATGCTTGATCCTGTTCGGATTTATGCGACGGCCATATACCTTGCTAGCATGATTTTTGCTCTTTTTGGTGCTCTCTATGTAAGTATTGTTGTGGTTCCCTTGAAATATTGTAGTAATAACCCATGGCCCATAGAGAATCCTTTTCTTTAATGAGGCAAGTCATTGTTTTGCATTTTTCTGTTTTTCTGTTTTCAACTTTTTAATTTAAAATTTATGAGAACAAGGCAAGTCATTGTTAATGTCTCATTCTCCTTTGATATAATTACAATGCAGGTCCACAACAAGCTGTTGACACTTCTTTCGCTCATTTTGGAATTTGGTGCCCTAATTTGGTTAGTTTTTGTAACTTACTTCTTGATCTCTCATTTTAACACTTCAATTTCTCTGAAAAAATTGGAGCAAATGTTTTTTTCTGAAACGGAGACAACCCTAGGTAATTACCCCGGCCTCCAACAAGGGAAAATGGTCTGATATTGTGTGAGCCTTTCTAACGACTCTAGTGTTGTAAAAAAATTCATCCCACTCTTTGTGATGTATACCAAATGAGAATTTTATTAATGGTTTAAAATTTGTGAATACAAGAAGACAAGTACTCTATTTATTGTGAAAGCAAAACTAATCCAAATCCTAATTAATAAAATAAACTAATCATAATCCTAATAAACCAAATAAATTAATCCTATTCCTAATAAATTAAGGATTTGACCATAATACCCTATTCCTACTGCATCATTCTATCCCTAAAAAAAGGACTTGCACTCGAGTTTTAAAATGAAAATGAAGGTAAAAGTAAAACGGTAAGCCACTTGAACAGAAACAACTTTGCAAATTGAATAAATCGAGTCAAGATTTTTTTTGAAATGAATTTATTTCTAGCAGAATCACCATGAATTAATCCAAGAATTATGTTATTCAAAAGATCCATCGCCATCATAACCAAGTCTCGCATTGCTTCATGATCTTCTCCTTCTTTCTTCGTCGGGCCTGTCAGTTCAACCATTTCAGACTTGTCGGTGATTTTGCCAAAATACCTGCATTTTTCAATTCCAAACATGGCATCTCTCATGTTGCTTTGCAATCAACTTGAATTAGGTTTTCAAGTTTATTCAAATAAGTTTGCCTGTGAGTATTCTCTTCTTCTACCTCTCCAATGACTTCGATTTTGACATTTTATGTTGTGGAGAGATTTGTGGGTCGGGTCACTTTTCCATTTTTGACATCAATTTTCTTTCCGATTTAAGTCTCACAATCTTCAATTTGAAAGTATTTTTTGTCGATTTCGTTCGCGTATGTTACTTGTTCTTTAATCAGCTTATCACATTCTTAACTTGAATCCCATTCTTCTTGTCTTCACCTATGATTTTCGCTTCAGCACCAAAAATTTTGATCGTGTTGTCTTCTTTTTTTTTTTTTAATTTTGTGTGGGATCTCTGATTTTGTCCATTGTTTGCTTCCTCGCAGTGAATTTCTTGAATTACATATTTTTTAAGTTCTTGCAAATGTTCTGAAAACTACCCCACGTTTTGAGCTATCATTCCAACAAACGTTGGATTTTCTTGACTTCCTTCTTCATTTCTTCTATAACATCATGAGTGATGTGCAAATTGGGTGTTCTTGAATAAGCTTCTTTATCATAATTTTTGTAGGACTGATTCTTGAATTTTCTTGCATATTTCTTAGTCTTTCTTGCATATTTCTCGGTCTTTCTGGGTTCTTCTTGATAACAAAAATAATAGTTAGGTCCAAGTTGAAGTAGTTCTTCAATAAAATTCCATTCTAGCAAAATGTTGATAAATCTTTGTTTCTTTTTCTTTTTTCTTTTTGAAATTTTAAGGGTTCCCCCTTTTTAGATATGTGTTGTTCGACAAGAGCACAACTTTACAAAGCTTCCTCTTGTGATCGTCGTCACAAAGAGTTTCTCGGTCTTTCGCCAATGGCAGTCAATGTTGGCCCAGAGCAACTAGATACCAAAGTTGATGTATACCAAATGAAAATTTTATTAATGTTTAAAAATTGTGAATACAAGAAGAGAAGTACCCTATAGTGAAAGCAAACTAATCCTAATCCTAATTAATAAAAGAAACTAATCCTAATCCTAATAAACCATAGAAACTAATCCTAATTAAGGACTTGTCCATAGTACCCTATTTCTACTGCATCATTGCTACTACATCACTTTATTTATGAAGAAGCAATCTAGCAGTGATCTAGAGGTTGTGCTCCCTTATCTAGACCAAGTGTATCTGCCATTTGGAAGAGGAATTTCCGAAATATTGATTGAATTAATGAAACAGTTGAACTATCTCTTGCCTCGTGTATTTCTTCCAAAAGGAAAACGTTCATGTGCCCACCGCCTGATATTAAAATCATCACTAATACACCATGCCTTTGTGCTGTAGTTTGAAAGAGAAAGCAATTCTGGCCACACAATTCTTCTTTCTTTGTGATCATTTGGACCATACACATTAGTAATCCAACAAGATTTCTTGCAAACTGTGATGCAATTGATTGAGAGGGAGTATCCACCTTTTAGAGTTTCAATAACTTTTAACTTGCTCATATCCACCTTTATTGGTGGCTTTATTATGTATTTCTACATTTGTGTTATTACTTTTCAGCTTTGCATCTGTGTATCATTAGGTAGTTTATGTTGTTATTTTCGGTCTTTGCATGACCATAGTATCGTTCTTTTTATTTTGGATATGATGAGGGTGCTAAGGGGTGTCAACCTAGTTGAGATGTCTGAGTGCACCTACTTATCCTCTCTTTTTCTCTCTCCCATTTCTAGGCTTCTCTATTATTCTCACTGTATAACTCTCTTGTACTTTGAGATTATTATTATTAATAAAGAAACTTGTCTTTGTTTAAAAAAAAAAACTTGCTCATATACCACAAAGTCAAGATCCCTCTGGAACGTCCAAAGGATTAAAAAAACTCCCACCCGATGTCCTTGGAGCTCCAAATAGATTTAATAAAAACGATATCGAACTCCTCCATCTTGGATTCCCGAATTTACTATATCCGGACAAATCTTCTTGAGAAATCTTTTGATAACTGACTGTTTAGATAAGTCCTTGAGACCTTTATATTTCACGACACAATCTTCATGAGAAAAGACAACTTCTGAACACCGCAATGCAGAGTGGAAAGGATCAAGCCAAAATTATACCACAATCCTTGACTATGGAATCCAAATGGTCTGGTATTTCTGAGGGCTTTAGAGGAGAGAAACAATGAGCACCCTGGAAATTACAGATTGCATCCGATCTCACTCAAACAAATCTGTAGGTCCATGTCATTAATATCTTCATGCCTCAAAGTTTCATGATCAATTGGCAATCCTTCAGAATCTTCACTACTAGCACTGAATTGGGATTCAGTATCCAAATCCTTCTTTTTATTAAACGGTTTGTTCGACTGGAGCAGGGAGACCCTCTCAAAAAAATTATCTCAGAATTAGAAACAGCGAAATTTGTATGCTTAAAGAGTTGAATTGACTGAGAGGGAGGCACTGACCTGTTGATAAAAGCTGGAAGTTGGGCATGAGTGCAACAAGCTTCCAAAAGGTCTGGATTGCTTTCAGATGTGGAGGAGTTAATTTTATTCAAAGCCCTAGTTTGAAATTTTGAGGAGATGTTATAAGCAAGCCCGAGGTTTTGAATCTTCATATGACTTTCCTTCAATAGGTTAGAGTACACCAAAGCTGTCCAAGCATTACGAAAGGAAGTACATCCTTCTATGTAGAATTTCTTGAATCGTTGGGAGTTTCTTTTAATTGATGGGCAGAGTAACTTGTTGGCTGGGGTGCTTCTCTTCTTAATGCTATCCGAACAGTATTAGGGGCTGGAGAAGTAGGTGAAGGTAGAGTATGAGGAAATCTGGGTGGTAACAAGGCTGGTGTTAAAACCTCTGACTCTTCTTGTTCCCTATTTGCGTACCAAAAGGCAGGAGCTACTGCTTTTGGAGATTTAGTGGGGCCAATCGGCCAATGGCAGTCATTTGAATAGTCTGGAGGTCATCCGATTGGTTAATGGATGCCATACCGTTAGGGAAGAGCCGTTCTTTGAAGAACTAATGTTTTGGCAGCCTTGATTCTCTCTCTTCGAGCTTTTCATTAATTACCAACCGTTGTCGACAAAGACTTGTTTTTCTTCACGTGGCTCGACACTTGAAAATGATTTATTGTTTAATTTTACAATAGACCTAGTCAATATGGCTTCTTCTCCTTCCGCTGCTCTTTTCTGTCTCTTCTTTTAAACCTCCTTTGGCCTCTGCTTCCTTTTGCTTTTTATTTTATTTTTTGATCTTCTTCTTCTGTTCTTTTCAAAAATCAAAACTCCAAGAAGGCAACAGAGGAAATTAGCAAAAAGCTTAGAGATACCATTCTTGGAAAATAAAATAACAGACAAGAAAAAAGAAAAATAAATAAAGGGTTGCGCCTTTACCAAGAACATAGGCATAATTTCTTTTATATTGCCAAGAAGGCAACTGACATAACTATGACGAAGATGCTGAGGGTATGTCTAGTTGAGATATTTGTTGCATCTCCTGATCTCTAGATTTCAAGTTTCTTTTGATTATTATATATCATTGTATTTTGAGTATTGAACTCTTTTCATTTTGTCAATGACAAATTCTTGTTTCCATTTGAAAGCGAAAATTCAAACGAAATGTCTCGAGTTAATTTCTTGTGAACAATCCAATTTGTTGGTTCAAAGAAACAATAAAATGTGGTGGCTTGCCATTGCAATAGTTATGAATTTTCAGTTGATATTCTTGTCAAAAATCAGAACTAAAATGCTGTTGCTACATTTACAAGCCTGCAATTCAAGGTCTGTTCTGTATGTCACGGAGCTCTCCCACTTTCAAATATGATAGATAGAAGAGAAGATTTTTTTTTCATAGCCTTGTATGCCTGATTTTATATCAGAGATAAAAGGATTGCTAGAACAAGAATTGTGCTTTACTGATCCACGTTTTCCTCTCTTTTCTTTGATAGGTATAGCTTGAGCTATATACCTTTTGCAAGGTCGATGGTTTCAAAGGTTATGGTATCTTGTTTGGATACGGAGTTTTAGGGGATGACATTGCGACATGCACGACAAAGAGGCATTATTGGACTACGTTGTATTATGTGTTTTTTTAGGCCTTGTTTATGTCTCCATAGGCATCGTTTATACTCTCTCGCTCAGACTGACATCTTCATAATGTGAGTGAATCCAATGTGGGCTTTAAACAGTATTCTTGTTTGTATCGTTCTTGAAGGGATTGGGTTGAAGTTGGCTGCCTAACATGTGAAATGAGTTCATAAAATAACACTTAATATTGGTGACGTGATCTCTCTTGAATTATTGCAACTTTTATTTTTCTTAGAGTTCGTTTGTACCAAAAAAACAAATTAGAAAAGAAGGATTATTAGTCCATGTTTAGCCGTTTTTCTAATGTACAAATGGTATTGAACTTTTGT

mRNA sequence

ATGGAGAAGATGAATCAGGCGTTTGAGAAAATGAAAATGTTAGTAGGAGTTGAGGTGGACGACGAACGTGAAGCTTCTACTGCTACCATCGACGACGGTAGCTCTTCATGGTTTATGGACGATTTCAATCGCAATTGCACGCTGTCTACGAAACAGCGATTTTATGGTTTTGCCATATGCTTTGTTGCTGGTGTAACGTGTACATTGATGTCAATGCTTGTTTTCTTCAATCCAATCAAATTTGGAATAGCTTTCACATTGGGCAACATGCTATCACTTGGAAGCACAGCATTTCTCATAGGCCCCAAAAGGCAAGTGACTATGATGCTTGATCCTGTTCGGATTTATGCGACGGCCATATACCTTGCTAGCATGATTTTTGCTCTTTTTGGTGCTCTCTATGTCCACAACAAGCTGTTGACACTTCTTTCGCTCATTTTGGAATTTGGTGCCCTAATTTGGTATAGCTTGAGCTATATACCTTTTGCAAGGTCGATGGTTTCAAAGGTTATGGTATCTTGTTTGGATACGGAGTTTTAG

Coding sequence (CDS)

ATGGAGAAGATGAATCAGGCGTTTGAGAAAATGAAAATGTTAGTAGGAGTTGAGGTGGACGACGAACGTGAAGCTTCTACTGCTACCATCGACGACGGTAGCTCTTCATGGTTTATGGACGATTTCAATCGCAATTGCACGCTGTCTACGAAACAGCGATTTTATGGTTTTGCCATATGCTTTGTTGCTGGTGTAACGTGTACATTGATGTCAATGCTTGTTTTCTTCAATCCAATCAAATTTGGAATAGCTTTCACATTGGGCAACATGCTATCACTTGGAAGCACAGCATTTCTCATAGGCCCCAAAAGGCAAGTGACTATGATGCTTGATCCTGTTCGGATTTATGCGACGGCCATATACCTTGCTAGCATGATTTTTGCTCTTTTTGGTGCTCTCTATGTCCACAACAAGCTGTTGACACTTCTTTCGCTCATTTTGGAATTTGGTGCCCTAATTTGGTATAGCTTGAGCTATATACCTTTTGCAAGGTCGATGGTTTCAAAGGTTATGGTATCTTGTTTGGATACGGAGTTTTAG

Protein sequence

MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAICFVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAIYLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF

Homology

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BLAST of CsaV3_2G019650 vs. NCBI nr
Match: XP_004147336.1 (PREDICTED: vesicle transport protein SFT2B [Cucumis sativus] >XP_011649441.1 PREDICTED: vesicle transport protein SFT2B [Cucumis sativus] >KGN62229.1 hypothetical protein Csa_2G336760 [Cucumis sativus])

HSP 1 Score: 344.4 bits (882), Expect = 2.4e-91
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60
           MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60

Query: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120
           FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI
Sbjct: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120

Query: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF 180
           YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF
Sbjct: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF 179

[Close]

BLAST of CsaV3_2G019650 vs. NCBI nr
Match: XP_008460845.1 (PREDICTED: vesicle transport protein SFT2B [Cucumis melo] >XP_008460846.1 PREDICTED: vesicle transport protein SFT2B [Cucumis melo])

HSP 1 Score: 337.0 bits (863), Expect = 3.8e-89
Identity = 174/179 (97.21%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60
           MEKMNQAFEKMKMLVGVEVDDER+ASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDDERQASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60

Query: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120
           FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFL+GPKRQVTMMLDPVRIYATAI
Sbjct: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAI 120

Query: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF 180
           YLASMIFALF ALYVHNKLLTLL+LILEFGALIWYSLSYIPFARSMVSKVMV+CLDTEF
Sbjct: 121 YLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMVACLDTEF 179

[Close]

BLAST of CsaV3_2G019650 vs. NCBI nr
Match: XP_022158451.1 (vesicle transport protein SFT2B [Momordica charantia])

HSP 1 Score: 319.7 bits (818), Expect = 6.3e-84
Identity = 162/179 (90.50%), Postives = 173/179 (96.65%), Query Frame = 0


Query: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60
           M+KMNQAFEKMKMLVGVE D+E +A+TAT+DDGSSSWFMDDFNRNCTLSTKQRFYGFAIC
Sbjct: 1   MDKMNQAFEKMKMLVGVEADEEHQATTATMDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60

Query: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120
           F AG+TCTLMSMLVFF PIKFGIAFTLGN+LSLGSTAFL+GPKRQVTMMLDPVRIYATAI
Sbjct: 61  FTAGLTCTLMSMLVFFKPIKFGIAFTLGNLLSLGSTAFLVGPKRQVTMMLDPVRIYATAI 120

Query: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF 180
           YLASMIFALF ALYVHNKLLTLL+LILEFG LIWYSLSYIPFAR+MVSKVMV+CLDTEF
Sbjct: 121 YLASMIFALFCALYVHNKLLTLLALILEFGGLIWYSLSYIPFARTMVSKVMVACLDTEF 179

[Close]

BLAST of CsaV3_2G019650 vs. NCBI nr
Match: XP_022973823.1 (vesicle transport protein SFT2B isoform X1 [Cucurbita maxima])

HSP 1 Score: 317.0 bits (811), Expect = 4.1e-83
Identity = 165/179 (92.18%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60
           MEKMNQAFEKMKMLVGVEVDD  EASTATI+D +SSWFMDDFNRNCTLSTKQR YGFAIC
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDD--EASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAIC 60

Query: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120
           FV+G+TCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFL+GPKRQVTMMLDPVRIYATAI
Sbjct: 61  FVSGLTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAI 120

Query: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF 180
           YLASMIFALF ALYVHNKLLTLL+LILEFGALIWYSLSYIPFAR+MVS+VMV+CLDTEF
Sbjct: 121 YLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARTMVSRVMVACLDTEF 177

[Close]

BLAST of CsaV3_2G019650 vs. NCBI nr
Match: XP_022932026.1 (vesicle transport protein SFT2B isoform X1 [Cucurbita moschata])

HSP 1 Score: 316.6 bits (810), Expect = 5.4e-83
Identity = 164/179 (91.62%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60
           MEKMNQAFEKMKMLVGVEVDD  EASTATI+D +SSWFMDDFNRNCTLSTKQR YGFAIC
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDD--EASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAIC 60

Query: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120
           FV+G+TCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFL+GPKRQVTMMLDPVRIYATAI
Sbjct: 61  FVSGLTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAI 120

Query: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF 180
           YLASMIFALF ALYVHNKLLTLL+L+LEFGALIWYSLSYIPFAR+MVS+VMV+CLDTEF
Sbjct: 121 YLASMIFALFCALYVHNKLLTLLALVLEFGALIWYSLSYIPFARTMVSRVMVACLDTEF 177

[Close]

BLAST of CsaV3_2G019650 vs. TAIR10
Match: AT5G23550.1 (Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 262.3 bits (669), Expect = 2.2e-70
Identity = 134/179 (74.86%), Postives = 158/179 (88.27%), Query Frame = 0


Query: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60
           M+KMNQA EKMKMLVG+EV+DE++A+    D+ SS  FM+D NRNC L+TKQRFYGFAIC
Sbjct: 1   MDKMNQAIEKMKMLVGMEVEDEQQAA----DEESSLSFMEDLNRNCALTTKQRFYGFAIC 60

Query: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120
             AG+TCTL+SMLVFFNP+KFGI FTLGN+++LGSTAFLIGP+RQVTMMLDP RIYATA+
Sbjct: 61  LSAGLTCTLLSMLVFFNPVKFGITFTLGNLMALGSTAFLIGPQRQVTMMLDPARIYATAL 120

Query: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF 180
           YLAS+I ALF ALYV NKLLTLL++ILEF  LIWYSLSYIPFAR+MVSK+ ++C DTEF
Sbjct: 121 YLASIIIALFCALYVRNKLLTLLAIILEFTGLIWYSLSYIPFARTMVSKIFMTCFDTEF 175

[Close]

BLAST of CsaV3_2G019650 vs. TAIR10
Match: AT5G24170.1 (Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-37
Identity = 78/148 (52.70%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 32  DGSSSWFMDDFNRN-CTLSTKQRFYGFAICFVAGVTCTLMSMLVFFNPIKFGIAFTLGNM 91
           DG++  F++D +   C LST QR YGFA     G+    +SM+VF  PIKF + FT GN+
Sbjct: 15  DGTTDSFLEDGSEGLCALSTTQRMYGFAASLATGLLLMFLSMIVFGIPIKFALLFTFGNV 74

Query: 92  LSLGSTAFLIGPKRQVTMMLDPVRIYATAIYLASMIFALFGALYVHNKLLTLLSLILEFG 151
           L++GSTAFL+GP++Q++MM DPVR  AT+IY+  ++ AL  AL +H+K+LT+L+++ E  
Sbjct: 75  LAIGSTAFLMGPEQQMSMMFDPVRFLATSIYIGCVVVALICALLIHSKILTVLAILCEIC 134

Query: 152 ALIWYSLSYIPFARSMVSKVMVSCLDTE 179
           ALIWYSLSYIPFAR MVS++M+   DTE
Sbjct: 135 ALIWYSLSYIPFARRMVSEIMIRLCDTE 162

[Close]

BLAST of CsaV3_2G019650 vs. TAIR10
Match: AT4G26550.1 (Got1/Sft2-like vescicle transport protein family)

HSP 1 Score: 52.0 bits (123), Expect = 4.5e-07
Identity = 32/101 (31.68%), Postives = 58/101 (57.43%), Query Frame = 0


Query: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120
           F   +  T+   ++   P KF I FTLG    +GS   L GPK Q+  M    R+ +T  
Sbjct: 102 FFIFIAFTMFLPVMVLMPQKFAICFTLGCGFIIGSFFALRGPKNQLAHMSSMERLPSTLG 161

Query: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIP 162
           ++A+M+  ++ ++ +H+ +L++L  +L+  AL++Y +SY P
Sbjct: 162 FIATMVGTIYVSMVLHSYILSVLFSVLQVLALVYYCISYFP 202

[Close]

BLAST of CsaV3_2G019650 vs. Swiss-Prot
Match: sp|O95562|SFT2B_HUMAN (Vesicle transport protein SFT2B OS=Homo sapiens OX=9606 GN=SFT2D2 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.4e-20
Identity = 60/171 (35.09%), Postives = 90/171 (52.63%), Query Frame = 0


Query: 9   EKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAICFVAGVTCT 68
           +K+K ++  +  ++R   +  ++  S SW               R  GF  CF  G+ C+
Sbjct: 2   DKLKKVLSGQDTEDRSGLSEVVEASSLSW-------------STRIKGFIACFAIGILCS 61

Query: 69  LMSMLVFFNPIK----FGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAIYLAS 128
           L+  ++ + P K    F + +T GN+ S+GST FL+GP +Q+  M +P R+ AT + L  
Sbjct: 62  LLGTVLLWVPRKGLHLFAVFYTFGNIASIGSTIFLMGPVKQLKRMFEPTRLIATIMVLLC 121

Query: 129 MIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCL 176
               L  A + HNK L L+  IL+  AL WYSLS+IPFAR  V K    CL
Sbjct: 122 FALTLCSAFWWHNKGLALIFCILQSLALTWYSLSFIPFARDAVKKCFAVCL 159

[Close]

BLAST of CsaV3_2G019650 vs. Swiss-Prot
Match: sp|Q8WV19|SFT2A_HUMAN (Vesicle transport protein SFT2A OS=Homo sapiens OX=9606 GN=SFT2D1 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.7e-19
Identity = 68/170 (40.00%), Postives = 96/170 (56.47%), Query Frame = 0


Query: 9   EKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAICFVAGVTCT 68
           EK++ ++  + DDE +  TA + D SS            LS   R   FAICFV GV  +
Sbjct: 2   EKLRRVLSGQ-DDEEQGLTAQVLDASS------------LSFNTRLKWFAICFVCGVFFS 61

Query: 69  LMSMLVFFNP--IK-FGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAIYLASM 128
           ++   + + P  IK F + +TLGN+ +L ST FL+GP +Q+  M +  R+ AT + L   
Sbjct: 62  ILGTGLLWLPGGIKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFEATRLLATIVMLLCF 121

Query: 129 IFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCL 176
           IF L  AL+ H K L +L  IL+F ++ WYSLSYIP+AR  V K   S L
Sbjct: 122 IFTLCAALWWHKKGLAVLFCILQFLSMTWYSLSYIPYARDAVIKCCSSLL 158

[Close]

BLAST of CsaV3_2G019650 vs. Swiss-Prot
Match: sp|Q8VD57|SFT2B_MOUSE (Vesicle transport protein SFT2B OS=Mus musculus OX=10090 GN=Sft2d2 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.7e-19
Identity = 60/171 (35.09%), Postives = 92/171 (53.80%), Query Frame = 0


Query: 9   EKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAICFVAGVTCT 68
           +K+K ++  +  ++R   +  ++  S SW               R  GF  CF  G+ C+
Sbjct: 2   DKLKKVLSGQDTEDRSGLSEVVEASSLSW-------------GTRIKGFIACFALGILCS 61

Query: 69  LMSMLVFFNPIK----FGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAIYLAS 128
           ++  L+ + P K    F + +TLGN++S+GST FL+GP +Q+  M +P R+ AT + L  
Sbjct: 62  VLGTLLLWVPRKGLGLFAVFYTLGNIMSIGSTVFLMGPLKQLKRMFEPTRLIATILVLLC 121

Query: 129 MIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCL 176
               L  A ++ NK L L+  IL+  AL WYSLSYIP+AR  V K    CL
Sbjct: 122 FALTLCSA-FLWNKGLALIFCILQSLALTWYSLSYIPYARDAVKKCFAVCL 158

[Close]

BLAST of CsaV3_2G019650 vs. Swiss-Prot
Match: sp|Q5U3Y5|SFT2A_RAT (Vesicle transport protein SFT2A OS=Rattus norvegicus OX=10116 GN=Sft2d1 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.3e-19
Identity = 67/170 (39.41%), Postives = 96/170 (56.47%), Query Frame = 0


Query: 9   EKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAICFVAGVTCT 68
           EK++ ++  + DDE +  TA + D SS            LS   R   F ICFVAG+  +
Sbjct: 2   EKLRRVLSGQ-DDEEQGLTAQVLDASS------------LSFNTRLKWFVICFVAGIFFS 61

Query: 69  LM--SMLVFFNPIK-FGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAIYLASM 128
           ++   +L   N +K F + +TLGN+ +L ST FL+GP +Q+  M +  R+ AT I L  +
Sbjct: 62  ILGTGLLWLPNGVKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFETTRLLATIIMLLCL 121

Query: 129 IFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCL 176
           +F L  AL+   K L LL  IL+F ++ WYSLSYIP+AR  V K   S L
Sbjct: 122 VFTLCAALWWRKKGLALLFCILQFLSMTWYSLSYIPYARDAVLKCCSSIL 158

[Close]

BLAST of CsaV3_2G019650 vs. Swiss-Prot
Match: sp|Q5SSN7|SFT2A_MOUSE (Vesicle transport protein SFT2A OS=Mus musculus OX=10090 GN=Sft2d1 PE=1 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.4e-18
Identity = 67/170 (39.41%), Postives = 95/170 (55.88%), Query Frame = 0


Query: 9   EKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAICFVAGVTCT 68
           EK++ ++  + DDE +  TA + D SS            LS   R   F ICFVAG+  +
Sbjct: 2   EKLRRVLSGQ-DDEEQGLTAQVLDASS------------LSFNTRLKWFVICFVAGIFFS 61

Query: 69  LM--SMLVFFNPIK-FGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAIYLASM 128
            +   +L   N +K F + +TLGN+ +L ST FL+GP +Q+  M +  R+ AT I L  +
Sbjct: 62  FLGTGLLWLPNGMKLFAVFYTLGNLAALASTCFLMGPVKQLKKMFETTRLLATIIMLLCL 121

Query: 129 IFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCL 176
           +F L  AL+   K L LL  IL+F ++ WYSLSYIP+AR  V K   S L
Sbjct: 122 VFTLCAALWWRKKGLALLFCILQFLSMTWYSLSYIPYARDAVLKCCSSLL 158

[Close]

BLAST of CsaV3_2G019650 vs. TrEMBL
Match: tr|A0A0A0LMG7|A0A0A0LMG7_CUCSA (Vesicle transport protein OS=Cucumis sativus OX=3659 GN=Csa_2G336760 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.6e-91
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60
           MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60

Query: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120
           FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI
Sbjct: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120

Query: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF 180
           YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF
Sbjct: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF 179

[Close]

BLAST of CsaV3_2G019650 vs. TrEMBL
Match: tr|A0A1S3CDD0|A0A1S3CDD0_CUCME (Vesicle transport protein OS=Cucumis melo OX=3656 GN=LOC103499598 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.5e-89
Identity = 174/179 (97.21%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60
           MEKMNQAFEKMKMLVGVEVDDER+ASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC
Sbjct: 1   MEKMNQAFEKMKMLVGVEVDDERQASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60

Query: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120
           FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFL+GPKRQVTMMLDPVRIYATAI
Sbjct: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLVGPKRQVTMMLDPVRIYATAI 120

Query: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF 180
           YLASMIFALF ALYVHNKLLTLL+LILEFGALIWYSLSYIPFARSMVSKVMV+CLDTEF
Sbjct: 121 YLASMIFALFCALYVHNKLLTLLALILEFGALIWYSLSYIPFARSMVSKVMVACLDTEF 179

[Close]

BLAST of CsaV3_2G019650 vs. TrEMBL
Match: tr|A0A2I4DPX1|A0A2I4DPX1_9ROSI (Vesicle transport protein OS=Juglans regia OX=51240 GN=LOC108982318 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 4.7e-75
Identity = 150/179 (83.80%), Postives = 167/179 (93.30%), Query Frame = 0


Query: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60
           MEKMNQAFEKMKMLVG+EV+DE +A  A +++ SS  FM+DFNR+CTLSTKQRF GFAIC
Sbjct: 1   MEKMNQAFEKMKMLVGMEVEDEHQA--AALEENSSLSFMEDFNRSCTLSTKQRFNGFAIC 60

Query: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120
           FVAG+TCTL+SMLVFFNPIKFG+ FTLGN+LS+GST FLIGPKRQVTMMLDPVRIYATAI
Sbjct: 61  FVAGLTCTLLSMLVFFNPIKFGLTFTLGNLLSIGSTGFLIGPKRQVTMMLDPVRIYATAI 120

Query: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF 180
           YLASMI ALF ALYVHN+LLTLL++ILEFGALIWYSLSYIPFARSMVSKVMVSCLDT+F
Sbjct: 121 YLASMIIALFCALYVHNRLLTLLAIILEFGALIWYSLSYIPFARSMVSKVMVSCLDTDF 177

[Close]

BLAST of CsaV3_2G019650 vs. TrEMBL
Match: tr|A0A2C9USA3|A0A2C9USA3_MANES (Vesicle transport protein OS=Manihot esculenta OX=3983 GN=MANES_13G154000 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.0e-73
Identity = 147/179 (82.12%), Postives = 163/179 (91.06%), Query Frame = 0


Query: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60
           MEKMNQAFEKMKMLVG+EV+DE +A     +D +S  FMDDFNR+CTLSTKQR YGFAIC
Sbjct: 1   MEKMNQAFEKMKMLVGMEVEDEEQAPEP--EDANSFSFMDDFNRHCTLSTKQRLYGFAIC 60

Query: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120
           FV+G+ CTL+SMLVFFNPIKFGI FT GN+LSLGSTAFLIGPKRQVTMMLDPVRIYATA+
Sbjct: 61  FVSGLACTLLSMLVFFNPIKFGITFTFGNLLSLGSTAFLIGPKRQVTMMLDPVRIYATAL 120

Query: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF 180
           YLAS+I ALF ALYVHNKLLTLL++ILEFGAL+WYSLSYIPFARSMVSKVMV+C DTEF
Sbjct: 121 YLASIIIALFCALYVHNKLLTLLAIILEFGALVWYSLSYIPFARSMVSKVMVACFDTEF 177

[Close]

BLAST of CsaV3_2G019650 vs. TrEMBL
Match: tr|I1L3N4|I1L3N4_SOYBN (Vesicle transport protein OS=Glycine max OX=3847 GN=100809781 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.1e-71
Identity = 142/179 (79.33%), Postives = 162/179 (90.50%), Query Frame = 0


Query: 1   MEKMNQAFEKMKMLVGVEVDDEREASTATIDDGSSSWFMDDFNRNCTLSTKQRFYGFAIC 60
           MEKMN+AFEK+K++VG++V+DE E   A +D+ +S  FMDDFNRNCTLST QR YGFAIC
Sbjct: 1   MEKMNKAFEKVKIMVGMDVEDE-EQQAAALDNSNSFAFMDDFNRNCTLSTTQRLYGFAIC 60

Query: 61  FVAGVTCTLMSMLVFFNPIKFGIAFTLGNMLSLGSTAFLIGPKRQVTMMLDPVRIYATAI 120
           F +G+TCTL+SMLVFF PIKF IAFTLGN+LSLGSTAFLIGPKRQVTMMLDP RIYATAI
Sbjct: 61  FASGLTCTLLSMLVFFKPIKFAIAFTLGNLLSLGSTAFLIGPKRQVTMMLDPARIYATAI 120

Query: 121 YLASMIFALFGALYVHNKLLTLLSLILEFGALIWYSLSYIPFARSMVSKVMVSCLDTEF 180
           Y+ASMI ALF ALYVHNKLLTLL++ILEFGAL+WYSLSYIPFAR+MVSK+MVSC DTEF
Sbjct: 121 YIASMIIALFCALYVHNKLLTLLAIILEFGALVWYSLSYIPFARAMVSKIMVSCFDTEF 178

The following BLAST results are available for this feature:

BLAST of CsaV3_2G019650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147336.1	2.4e-91	100.00	PREDICTED: vesicle transport protein SFT2B [Cucumis sativus] >XP_011649441.1 PRE...	[more]
XP_008460845.1	3.8e-89	97.21	PREDICTED: vesicle transport protein SFT2B [Cucumis melo] >XP_008460846.1 PREDIC...	[more]
XP_022158451.1	6.3e-84	90.50	vesicle transport protein SFT2B [Momordica charantia]	[more]
XP_022973823.1	4.1e-83	92.18	vesicle transport protein SFT2B isoform X1 [Cucurbita maxima]	[more]
XP_022932026.1	5.4e-83	91.62	vesicle transport protein SFT2B isoform X1 [Cucurbita moschata]	[more]

BLAST of CsaV3_2G019650 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23550.1	2.2e-70	74.86	Got1/Sft2-like vescicle transport protein family	[more]
AT5G24170.1	1.4e-37	52.70	Got1/Sft2-like vescicle transport protein family	[more]
AT4G26550.1	4.5e-07	31.68	Got1/Sft2-like vescicle transport protein family	[more]

BLAST of CsaV3_2G019650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O95562\|SFT2B_HUMAN	4.4e-20	35.09	Vesicle transport protein SFT2B OS=Homo sapiens OX=9606 GN=SFT2D2 PE=1 SV=1	[more]
sp\|Q8WV19\|SFT2A_HUMAN	3.7e-19	40.00	Vesicle transport protein SFT2A OS=Homo sapiens OX=9606 GN=SFT2D1 PE=1 SV=1	[more]
sp\|Q8VD57\|SFT2B_MOUSE	3.7e-19	35.09	Vesicle transport protein SFT2B OS=Mus musculus OX=10090 GN=Sft2d2 PE=1 SV=1	[more]
sp\|Q5U3Y5\|SFT2A_RAT	8.3e-19	39.41	Vesicle transport protein SFT2A OS=Rattus norvegicus OX=10116 GN=Sft2d1 PE=2 SV=...	[more]
sp\|Q5SSN7\|SFT2A_MOUSE	2.4e-18	39.41	Vesicle transport protein SFT2A OS=Mus musculus OX=10090 GN=Sft2d1 PE=1 SV=1	[more]

BLAST of CsaV3_2G019650 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LMG7\|A0A0A0LMG7_CUCSA	1.6e-91	100.00	Vesicle transport protein OS=Cucumis sativus OX=3659 GN=Csa_2G336760 PE=3 SV=1	[more]
tr\|A0A1S3CDD0\|A0A1S3CDD0_CUCME	2.5e-89	97.21	Vesicle transport protein OS=Cucumis melo OX=3656 GN=LOC103499598 PE=3 SV=1	[more]
tr\|A0A2I4DPX1\|A0A2I4DPX1_9ROSI	4.7e-75	83.80	Vesicle transport protein OS=Juglans regia OX=51240 GN=LOC108982318 PE=3 SV=1	[more]
tr\|A0A2C9USA3\|A0A2C9USA3_MANES	2.0e-73	82.12	Vesicle transport protein OS=Manihot esculenta OX=3983 GN=MANES_13G154000 PE=3 S...	[more]
tr\|I1L3N4\|I1L3N4_SOYBN	1.1e-71	79.33	Vesicle transport protein OS=Glycine max OX=3847 GN=100809781 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0016192	vesicle-mediated transport

Vocabulary: **INTERPRO**
Term	Definition
IPR011691	Vesicle_transpt_SFT2
IPR007305	Vesicle_transpt_Got1/SFT2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0015031	protein transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G019650.1	CsaV3_2G019650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007305	Vesicle transport protein, Got1/SFT2-like	PFAM	PF04178	Got1	coord: 61..171 e-value: 2.0E-32 score: 111.8
None	No IPR available	PANTHER	PTHR23137:SF14	SUBFAMILY NOT NAMED	coord: 33..178
IPR011691	Vesicle transport protein SFT2	PANTHER	PTHR23137	UNCHARACTERIZED	coord: 33..178

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G019650	CSPI02G16370	Wild cucumber (PI 183967)	cpicucB082
CsaV3_2G019650	Cucsa.228240	Cucumber (Gy14) v1	cgycucB344
CsaV3_2G019650	CsGy2G016020	Cucumber (Gy14) v2	cgybcucB064
CsaV3_2G019650	Carg24294	Silver-seed gourd	carcucB0756
CsaV3_2G019650	Cla007843	Watermelon (97103) v1	cucwmB154
CsaV3_2G019650	MELO3C023206	Melon (DHL92) v3.5.1	cucmeB104
CsaV3_2G019650	ClCG02G000170	Watermelon (Charleston Gray)	cucwcgB139
CsaV3_2G019650	Lsi10G007720	Bottle gourd (USVL1VR-Ls)	cuclsiB106
CsaV3_2G019650	MELO3C023206.2	Melon (DHL92) v3.6.1	cucmedB097
CsaV3_2G019650	Cla97C02G026400	Watermelon (97103) v2	cucwmbB124
CsaV3_2G019650	Bhi10G001378	Wax gourd	cucwgoB182

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G019650	Cucurbita maxima (Rimu)	cmacucB0652
CsaV3_2G019650	Cucurbita maxima (Rimu)	cmacucB0708
CsaV3_2G019650	Cucurbita moschata (Rifu)	cmocucB0638
CsaV3_2G019650	Cucurbita moschata (Rifu)	cmocucB0642
CsaV3_2G019650	Cucurbita moschata (Rifu)	cmocucB0694
CsaV3_2G019650	Cucurbita pepo (Zucchini)	cpecucB0335
CsaV3_2G019650	Cucurbita pepo (Zucchini)	cpecucB0886
CsaV3_2G019650	Bottle gourd (USVL1VR-Ls)	cuclsiB107