CsaV3_2G017200 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_2G017200
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	B3 domain-containing transcription factor VRN1-like
Location	chr2 : 14350432 .. 14357131 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGAAGTTGACATCTTGCACATGAAAGAAGGATTGAGAGTCATAGATTGGAAAGCGCTTGCGCTTGCCATTGCCCTTTCTCGTTGGTTAGTTGTCGTCGGCCACAGCTTCTTCTTGTTGTCCATCAGTTCTACAGCGCCAAAGTTAACTTCGCCAGTTTTGGAATCTAAGGTTTCTTTTTCGTTATTGATTAGTACAAATGTGATTTACTACCCCAGTATGTTAACTACATGTCCACTATAGAGATTTTTTTTATTAGGAGTGTAGTTCAATCGTTCAACGTAGAGACGTGGTCTCTTTGGGTACACTCCTCTAAATATATATTCTAAAAGAGTTACTAGTTTTAGATATGTGTAGAAGATTAAAAGTACTTTTGAATGATTGTTTATTTGGAGTGTATTAGTTAAATTATTAAAATTTCAAACGCGTTTAACTTTAATCTAACCAAAACCAAAAATAATCTTATAAGTCAATATTAAAAGAGCCTAGATTTGATGTTCTTCATCAAGATCAAACCTCAAACAAGAAACATACCTTGAGATATATGTGTCTCCTTTTTTACCTTTTCTTCAGCATCATCGAGACAAATTATCTTTATTGGATATTCGATTTCTGTAGCTGTACGATCAAAGATAACCACGTAAAAGCTCGAAGATTGACATTCGTATTTAAAGACGAGAAAATACTCCAATCCAACAGAGTAAAACTCTACAAACGTTTGCCAACCATGATCGTGAAACCACACTCTTGTTCCATCATTAGATTTTGTCAAACCCACATTCCACTTTCTACCATCTGCTGCCACCTTGAGACATATTTGGTTAGTTGCAAAAGCTTTTACACCATATTCTCTCACAAACTTTGTTGGGATTTCCTATTAAAAAAACAGTATACAGTTAAAATGAAAAGACAAAGAACCAAACAACATCGTAACAATTAAGAGACTTTGGATAATTGGAGTAATATAATTTTGCTTACAAGCTTTTGATCTTTGAGAGCACTAGCCATAACAACCTTGAAGAAATGGGGACTGTCCAATGCTTTACGAGGTCGTTTAACAACATTGTTCGTCCAATAATTGAAGGAATCCATTGAAAGGAAGCTCTTGTTTAAGAAATTCAAGTATTCTTGTTTTGAGCGAGGGTTTGAGGAAGAATAATCTTGAAGAAATGGGGCATTGAGGAAGACGAGGAAGCCATGGCAATAGGAAGCTTTAATTAATTTGATGTTCCTTTTTGTATTTTTTGTATTTCAAGTCATCTATGGAAATTAATTAAGGAAAATCAAATCTGTAAGAACATGATTAAACCTTATTTTTCAAAAAATCTTCAATTGTTGCCTATTTTGGTACAGAGATCGATAATTATCTTCTTTCATAAACGTTCAACACACTAACTTTCCATATACTTAACATGAACAAGGTATTATCAAATTGTATCAAGAGTTGACCCTTCATATTCTAGTAGTTAACATCAATTAATTATTAGATATATCAACTTCTCATTTTCCCCTTAGATCTTAATCATTACACAAATCCTTATATATAATACTTCAAGTAAACAATAATGTTTAGTAGAAGAGACTATTGTGATCAATTTAAATGAGCTAAAGATGTTGATAGACAATAATATATAACTAATAAACTATGAAGCTTTCTTAATTACATTTATAAATATTTTTTAGTTTTGTCATTTACATTGATTTTTTTTGTTATTATATTAATTTAAATCTTGGACATTTATGTATCTTAATTTATTACTCCCTAGTCCCTCCTTTTGGATTTAGTATGAAAAATATTCTATGAGATGTTTAATGGGGAATTGACAAAAATAGGCCAAAAATGTGATAGATAAAGACTTTTAGGATTGATTGTAAAAAAGTTGACATTTAGGACAAATTGGAGGTGAAATGACGAAAATACCCTCATTTCAGATTAAACATTTCAATTTAAGAACCCGCGAGATGTCTACCAGATGTTTGCGAGATAAAATAATAATAATAATAAATTGTTTTAATTGTTTTATTTTTTTTAAATCCGAATACGAATTGTGTTATACGTATATATATTTGCATCTTAAATGTATAAATTAAATATTATTTTTTATTGTTTCAAGTTGATTTATGGTTGATTTAAGATTGTTTTAGAGATGTTTCAAATGATGTTAGCAATTTATTATTATTATTATTTTATCTCGCAAACATCTGGTAGACATCTCGCAAACATCTCGTAGTCATCTCGCAGACATCTCGCGGGTTCTTAAATTGAAATGTTTAATATGAAATAAGGGTATTTTCGTCATTTCACCTTCAATTTGTCCTAAATGTCAACTTTTTCACAATCAATCCTAAAAGTCTTTATCTACTCCATTTTTGGCCTATTTTTGTCAATTCCCCATGTTTAATTTTACAAGTATACTTCTCTATCAATTATGACTTTTATTAGGATTATACTTGAAATTTATTATTAATGCATATATATTTCTTCAATCAAGAAATGTATGGGGTAGTGAATTGATGTGGATACACATGGATTTCATGAACCCAACACATTCAAAACTTCATGATTTTTAATGTATTTTCATTTTGTTTTAACTTGACAAGTTAGGGTAGCTATCATTAATAGGTTAGTATAAAGATGGTCGTTGCAAAACTTCATGATTTTTAATGTATTTTCATTTTGTTTTAACTTGACAAGTTAGGGTAACTATTATTAATAAGTTAGTATAAAGATGGTCGTTGGAAGATATAGTTGTTGAAAGATAGAAAACTTAGTTGTTAATGTGTTTATTTTGACTTTTTAGTATTTTCACTTCATTTGTAGAAAGAAAAGTTTTGATTAATGCAATTTGAAATATCATTTGAGACTTTTTCTTTAATTGTTTTGATTAATGCAATTTGAAATATCATTTGAGACTTTTTCTTTAACTTGCAATTATTCTTACGACAGAAGGTATGTAAGCCATCAATCTAACCTTCATCAAGTTTGATTGTGAGGTGACTCAATTTAGTTAAAACACTTACCATTTTCAAATCTTGCCTCTAGATCTTTGATGTAGGAAGTAATCTAATTTTAACTTTTTTTTTTTGTTGATCTAAATTAGTATAAGGAGATTGTTAATTTCTTATTCCACAAGTTCTTGCTACGTTAATAGCTTGGATCTCTGGATTGAGGATTTGGATTGCCTTATCACTACCCAAGATATACACTTTATTAAATAGCTAACACAAATGTATATTAGTTTAATTTTTAGTCCTAGATGAAGATCAATACTTGAATTTCTTAAACAAGAGCTCCCCACCATAGCTTCTTTCGGTCACTGGAAGAACGACGCTGTGAAACGACCTTGTAAAGCGTCAGAAGGTTCTTTATTGCTAGTGGTCTCAAGGAACAAAAAGGTTGTAAGCAAAATTATATATTACTGTAGTATTCCAAGTATGTTGTTAAGTTAATATGGCTTCTTTGTCTTTCCATTTTAACCTTATATATAATGTTTTTCTTAAAAGGAAATCCCAAATTTGTGAGAGAATATGGTGTAAAAGCTTATGCAACTAACCAAATATATGTTTCAAGGTGGCAGCTGATTGGTAGAAATTGGAATGTGGGTTTGACAAAATCTAATGATGGAACAAGAGGAAAAATATATAGCAAGCCCTCACTTTGTTTCCCTAAAAAATGCACTAATTAATAACCAAGTTCGTCCAAAAGAAACCCTACATTTCAAAAATGGAAAAGTTAACTGATGCCATATTATATAGAACAGACGAACAACAAGAGAAAGCCGTTGTTGATGACAATGAGCTAGCGAGCAAACACGAGCAAACACTCAATCATGACAATAATTTTTGTTTTAAAAATTATTCCACATGTGTTTTAAAAAAAGCAAGGCAAAATATGTACGTATTTCATGATTAATCAAAAAACTTACAAGCTTTTTTTCAGTGAGGGTTTGAGGAAGAATAATCTTGAAGAAATGGGGCATTGAGGACGACGAGGAAGCCATGGCAATAGGAAGCTTTAGTAGTTTGTTGTTTCTTTTTGTTTCGGTTTTGAAGTTGGGATTGTGAAGTACAAAAGAAGAACAATATTTATGCTATTAGATTAATAATTACCAAAGAGGTTTGGAGTTGTGTGGGGAAGGTATAATTATTATGAATAGGGGTTTCATTAATTATATGACTTCAATTCAAATCAGTTAATTATTAGATATCAACTTCTCACTTTTCCCTAAGATCTTAATCATTACAAATCCTTATATATAATACTTCAAATAAACAATAATGTTTACTAGAAGAGACTATTATCAATTTAAATGAATTAAAGATGTTGATATTATAGACAATCATATATCACTTATAAACTATCAAACTTTGTTACATTTTTAAATATGTTTTGAAGTTTTCTCATTTGCCATGATTTCTTTTTGTTATTATATTAATTTAAATGTTAGACATTTATGTATATCAATTTATTACTCCCTCCTTTTTTATTTAGTATGAAAAGTATTGTATGAGATGTTTAATTTTCCAAGTATACCTCTAAATTGTTATAGGAATCAATTAGGACCTTTATTAGGATTATATTTGAAATTTCTATATTAATGCAGTCGTGAATGCATACATTTCTTCAAATGTCAATTAACAAATTGGAATTATAAAATTTATATTTGATTGAATTTAAAGGATTTCTAGTAAGTTGAATAATTAATCATAGATTTTTCAGTATGATCTAAATGTAGCCTAACTCAAATTGAAGGTTTAAATTGATACAACTACTAATAAAAACACATAAGTTTAATTGATAAAATCTTCATTTTAGGATAGATTATTGATATAATACAAAATTTAGCGGTATAAAATTGAAAATTTTCTAGATTAAAAAACATGGGTGTATGCATGAGTTGGTGGTAATGTTGGTTTGGGTATTTTGGTTTGAATGAAGAGAGAGAGAAAGGGGATTTTGAGAAGTAATGAAGAGATGGGAAAAATTGGTAAGAAATAAAAGCAAACAAACCAACAGAAAAAATGAATTCAGTGGAGAAGGTATGAAGTAGAAACAAAAAAAAAAAAAAAACTAAGGAAAAATAATGATTAACGTGAAGATATAAAAAAAATAGAAAAAAGTAGTAATTATTTGTTTATAGAAGAAGACTCGTTGATTAAAAAGATGTGTTGAGAGTGAAGAAAAGGTTTACACCAACATCATTAATAACTCCTTCAATATCCTTTCTAATCAGCATTTAATAAACAAGATTTTGTCAGCCTTTTTTGCCTTCACCGAATCTCTTGATATTCGCATGGCATAAATTCACAGCAAACAAATAAAGATATTCCATTAAACAAACTAATTAAACACTAAGAGATAGATTAGTTTATTTAATTAATTTGCATGCACCCACACTTTTTTTTAAGTTCATTTCTTAGTCAATATATAGAACAGGATTATTCAACACCTTTTCTTCAGCAAGCTGAGTTTGAACTCATGGCTTCTTCCTCTCATTACCGATCAAACAGCATCGTTAAACAATCTAGTGGAGCGTTACACAATCCTCATTTCTTTAAAGTTGTTCTTGATGATGCTCTCAAGGAACAAAAACTTGTAAGCAAAAAGCTATACTATATATGTATCTATGTCTTTTGTAATTATCTCTTTCCATGCATGTTAAACTCTACAAATGTTTTTCTTTCATTTTTATGTTTAGGAAATCCCAAGAAAGTTTGTGAGGGAATATGGCCTAAAAGCTTTGTTAAAGGATCAAATATGTCTAAAAGTGAGGGATGGCAAAGAATGGAACGTTGGGTTGACAAAGAGTAATAATGGAACAAGAGTTTGGTTACATTATGGTTGGGAAAAGCTTGTAGGGTTTTATTCTGTTAAAAGTGGCTACTTTCTTGTGTTCAAATATGAAAACCCATCTCCGAGTTTCTATGTAGTCATCTTTGATCATACTGCCACGGAAATTGAGTATCCCGTAAAGAAAACTCGTCTGGATAAAGCTAAGGAAAAGGTAAAAATGGAGACATATTTTGATGATGATTGTCTTGACCTAGGTATGTTTCTTTGCCTAAGACCACCTTTTTTTTAATTGTTTACCTAAGGTATATATGTTTTTCCATGCATGCTTTGCACTATTTATTTATTACCTAGCTTTTATTTCATAGATTTCAAGGATGGTGATCTTAGCTCTGGGGTGAAGAAACCGACGAACAGCAGGTGGAGGCCGCCGTCGACGGGGAGCCAGCAAGCAAGGGCGATGGCGGAAGCTAACAGATTTCAATCCATGACTTTGAATCCTTCTTTCATCTGCAAGATTTGGCCATCACACATTCATCGCACAAAATCTCTTGTAAGCTGCAAATTTAACTTCATTTTTTCTGCTATGAAAAGCATGGTATATATATATTTTAACCTCTCTTTTTTTCGTTTTATGGAAAGAGTATACCAAAAAATTTTGCTGACATGAATCTAGAAGATTCTATCACAAAAATAATACTCAAAGCATCAGATGGAAGAATGTGGAGTGGTGAATGTGGCTTTTATTGGACTCCTAAAATGCAAAGGATGACTTTCTATAAGTATGGTTGGAAGAGTTTTATTCGAGACAATAACTTAGCAGTTGGAGATTTTTGTGTTTTTGAAATGACTGGAAAAAACAGTACAACAGTCGCTTTCAAAGTTGAAAGTTTTAGGGCTTCTTGA

mRNA sequence

ATGTGTGAAGTTGACATCTTGCACATGAAAGAAGGATTGAGAGTCATAGATTGGAAAGCGCTTGCGCTTGCCATTGCCCTTTCTCGTTGGTTAGTTGTCGTCGGCCACAGCTTCTTCTTGTTGTCCATCAGTTCTACAGCGCCAAAGTTAACTTCGCCAGTTTTGGAATCTAAGGAAATCCCAAGAAAGTTTGTGAGGGAATATGGCCTAAAAGCTTTGTTAAAGGATCAAATATGTCTAAAAGTGAGGGATGGCAAAGAATGGAACGTTGGGTTGACAAAGAGTAATAATGGAACAAGAGTTTGGTTACATTATGGTTGGGAAAAGCTTGTAGGGTTTTATTCTGTTAAAAGTGGCTACTTTCTTGTGTTCAAATATGAAAACCCATCTCCGAGTTTCTATGTAGTCATCTTTGATCATACTGCCACGGAAATTGAGTATCCCGTAAAGAAAACTCGTCTGGATAAAGCTAAGGAAAAGGTAAAAATGGAGACATATTTTGATGATGATTGTCTTGACCTAGATTTCAAGGATGGTGATCTTAGCTCTGGGGTGAAGAAACCGACGAACAGCAGGTGGAGGCCGCCGTCGACGGGGAGCCAGCAAGCAAGGGCGATGGCGGAAGCTAACAGATTTCAATCCATGACTTTGAATCCTTCTTTCATCTGCAAGATTTGGCCATCACACATTCATCGCACAAAATCTCTTAGTATACCAAAAAATTTTGCTGACATGAATCTAGAAGATTCTATCACAAAAATAATACTCAAAGCATCAGATGGAAGAATGTGGAGTGGTGAATGTGGCTTTTATTGGACTCCTAAAATGCAAAGGATGACTTTCTATAAGTATGGTTGGAAGAGTTTTATTCGAGACAATAACTTAGCAGTTGGAGATTTTTGTGTTTTTGAAATGACTGGAAAAAACAGTACAACAGTCGCTTTCAAAGTTGAAAGTTTTAGGGCTTCTTGA

Coding sequence (CDS)

ATGTGTGAAGTTGACATCTTGCACATGAAAGAAGGATTGAGAGTCATAGATTGGAAAGCGCTTGCGCTTGCCATTGCCCTTTCTCGTTGGTTAGTTGTCGTCGGCCACAGCTTCTTCTTGTTGTCCATCAGTTCTACAGCGCCAAAGTTAACTTCGCCAGTTTTGGAATCTAAGGAAATCCCAAGAAAGTTTGTGAGGGAATATGGCCTAAAAGCTTTGTTAAAGGATCAAATATGTCTAAAAGTGAGGGATGGCAAAGAATGGAACGTTGGGTTGACAAAGAGTAATAATGGAACAAGAGTTTGGTTACATTATGGTTGGGAAAAGCTTGTAGGGTTTTATTCTGTTAAAAGTGGCTACTTTCTTGTGTTCAAATATGAAAACCCATCTCCGAGTTTCTATGTAGTCATCTTTGATCATACTGCCACGGAAATTGAGTATCCCGTAAAGAAAACTCGTCTGGATAAAGCTAAGGAAAAGGTAAAAATGGAGACATATTTTGATGATGATTGTCTTGACCTAGATTTCAAGGATGGTGATCTTAGCTCTGGGGTGAAGAAACCGACGAACAGCAGGTGGAGGCCGCCGTCGACGGGGAGCCAGCAAGCAAGGGCGATGGCGGAAGCTAACAGATTTCAATCCATGACTTTGAATCCTTCTTTCATCTGCAAGATTTGGCCATCACACATTCATCGCACAAAATCTCTTAGTATACCAAAAAATTTTGCTGACATGAATCTAGAAGATTCTATCACAAAAATAATACTCAAAGCATCAGATGGAAGAATGTGGAGTGGTGAATGTGGCTTTTATTGGACTCCTAAAATGCAAAGGATGACTTTCTATAAGTATGGTTGGAAGAGTTTTATTCGAGACAATAACTTAGCAGTTGGAGATTTTTGTGTTTTTGAAATGACTGGAAAAAACAGTACAACAGTCGCTTTCAAAGTTGAAAGTTTTAGGGCTTCTTGA

Protein sequence

MCEVDILHMKEGLRVIDWKALALAIALSRWLVVVGHSFFLLSISSTAPKLTSPVLESKEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDFKDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLAVGDFCVFEMTGKNSTTVAFKVESFRAS

Homology

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BLAST of CsaV3_2G017200 vs. NCBI nr
Match: KGN62043.1 (hypothetical protein Csa_2G292240 [Cucumis sativus])

HSP 1 Score: 555.1 bits (1429), Expect = 1.6e-154
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 59  EIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKS 118
           EIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKS
Sbjct: 3   EIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKS 62

Query: 119 GYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDFKD 178
           GYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDFKD
Sbjct: 63  GYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDFKD 122

Query: 179 GDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSI 238
           GDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSI
Sbjct: 123 GDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSI 182

Query: 239 PKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLAVG 298
           PKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLAVG
Sbjct: 183 PKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLAVG 242

Query: 299 DFCVFEMTGKNSTTVAFKVESFRAS 324
           DFCVFEMTGKNSTTVAFKVESFRAS
Sbjct: 243 DFCVFEMTGKNSTTVAFKVESFRAS 267

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BLAST of CsaV3_2G017200 vs. NCBI nr
Match: XP_008457959.1 (PREDICTED: putative B3 domain-containing protein Os03g0621600 isoform X2 [Cucumis melo])

HSP 1 Score: 486.5 bits (1251), Expect = 7.1e-134
Identity = 234/266 (87.97%), Postives = 248/266 (93.23%), Query Frame = 0


Query: 59  EIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKS 118
           EIPRKFVREYGL+ALLKDQ+CLKVRDGKEWNVGLTKSNNGTRVW HYGWEKLV FYSVKS
Sbjct: 41  EIPRKFVREYGLQALLKDQVCLKVRDGKEWNVGLTKSNNGTRVWFHYGWEKLVEFYSVKS 100

Query: 119 GYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDFKD 178
           GYFLVFKYEN S S YVVIFD TATEIEYPVKK  LDK+KE+VKMETYFDDD LDLDFKD
Sbjct: 101 GYFLVFKYENQSSSLYVVIFDRTATEIEYPVKKISLDKSKERVKMETYFDDD-LDLDFKD 160

Query: 179 GDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSI 238
           GDLS GVKKPTNSRW+PPSTGSQQARAMA+ANRFQSMTLNPSFICK+WPSHIHRTKSLSI
Sbjct: 161 GDLSFGVKKPTNSRWKPPSTGSQQARAMAKANRFQSMTLNPSFICKVWPSHIHRTKSLSI 220

Query: 239 PKNFADMNLEDSITKIILKASDGRMWSGECGFYWTP-KMQRMTFYKYGWKSFIRDNNLAV 298
           PK+FADM++EDS TKIILKASDGRMWSG CGFYWTP KMQRMT++KYGWKSFIRDN L V
Sbjct: 221 PKSFADMHVEDSTTKIILKASDGRMWSGGCGFYWTPYKMQRMTYFKYGWKSFIRDNYLTV 280

Query: 299 GDFCVFEMTGKNSTTVAFKVESFRAS 324
           GDFCVFEMTGKN TT++FKVE F AS
Sbjct: 281 GDFCVFEMTGKNCTTISFKVEIFTAS 305

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BLAST of CsaV3_2G017200 vs. NCBI nr
Match: XP_016902156.1 (PREDICTED: uncharacterized protein LOC103497524 isoform X1 [Cucumis melo])

HSP 1 Score: 468.4 bits (1204), Expect = 2.0e-128
Identity = 233/303 (76.90%), Postives = 248/303 (81.85%), Query Frame = 0


Query: 59  EIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKS 118
           EIPRKFVREYGL+ALLKDQ+CLKVRDGKEWNVGLTKSNNGTRVW HYGWEKLV FYSVKS
Sbjct: 41  EIPRKFVREYGLQALLKDQVCLKVRDGKEWNVGLTKSNNGTRVWFHYGWEKLVEFYSVKS 100

Query: 119 GYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDD-------C 178
           GYFLVFKYEN S S YVVIFD TATEIEYPVKK  LDK+KE+VKMETYFDDD       C
Sbjct: 101 GYFLVFKYENQSSSLYVVIFDRTATEIEYPVKKISLDKSKERVKMETYFDDDLDLGMFLC 160

Query: 179 LD------------------------------LDFKDGDLSSGVKKPTNSRWRPPSTGSQ 238
           L                               +DFKDGDLS GVKKPTNSRW+PPSTGSQ
Sbjct: 161 LRTPFFLIVYLRYICFSMHALHYLFILSNFYFIDFKDGDLSFGVKKPTNSRWKPPSTGSQ 220

Query: 239 QARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSIPKNFADMNLEDSITKIILKASDG 298
           QARAMA+ANRFQSMTLNPSFICK+WPSHIHRTKSLSIPK+FADM++EDS TKIILKASDG
Sbjct: 221 QARAMAKANRFQSMTLNPSFICKVWPSHIHRTKSLSIPKSFADMHVEDSTTKIILKASDG 280

Query: 299 RMWSGECGFYWTP-KMQRMTFYKYGWKSFIRDNNLAVGDFCVFEMTGKNSTTVAFKVESF 324
           RMWSG CGFYWTP KMQRMT++KYGWKSFIRDN L VGDFCVFEMTGKN TT++FKVE F
Sbjct: 281 RMWSGGCGFYWTPYKMQRMTYFKYGWKSFIRDNYLTVGDFCVFEMTGKNCTTISFKVEIF 340

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BLAST of CsaV3_2G017200 vs. NCBI nr
Match: XP_016902162.1 (PREDICTED: B3 domain-containing protein At3g18960-like [Cucumis melo])

HSP 1 Score: 275.4 bits (703), Expect = 2.5e-70
Identity = 148/268 (55.22%), Postives = 183/268 (68.28%), Query Frame = 0


Query: 59  EIPRKFVREYGLKALLKDQICLKV-RDGKEWNVGLTKSNNGTRVWLH-YGWEKLVGFYSV 118
           EIPRKFVREYG+KA   +QICLKV  DG++WNV LTK+N+GTRVW H  GW+  V FYSV
Sbjct: 39  EIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSV 98

Query: 119 KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVK-KTRLDKAKEKVKMETYFDDDCLDLD 178
              YFLVFKYE  S SFYVVIFD TATEIEYP+K    +D A+EKVK ET    + +D  
Sbjct: 99  GLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEKVKKETNISQELMD-- 158

Query: 179 FKDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKS 238
                         N +    +T SQ+ +AMA A  FQSMT+NPSF+CK+ PSHIHR  S
Sbjct: 159 --------------NKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHIHR--S 218

Query: 239 LSIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNL 298
           L++PK F +M++E S+ + IL+ SDGR W G C FY   +M++       W+ F +DNNL
Sbjct: 219 LNVPKRFVEMHIEKSM-ESILQVSDGRTWEGSCCFYMNKRMKKRAELASSWRKFKKDNNL 278

Query: 299 AVGDFCVFEMTGKNSTTVAFKVESFRAS 324
            VGDFCVFEM GK+ST ++FKVE FRAS
Sbjct: 279 KVGDFCVFEMIGKSSTRISFKVEIFRAS 287

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BLAST of CsaV3_2G017200 vs. NCBI nr
Match: XP_022158239.1 (B3 domain-containing transcription factor VRN1-like [Momordica charantia])

HSP 1 Score: 261.9 bits (668), Expect = 2.8e-66
Identity = 144/278 (51.80%), Postives = 191/278 (68.71%), Query Frame = 0


Query: 59  EIPRKFVREYG---LKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYS 118
           EIP+KFVREY    ++ALL  ++CLKV DG+EWN+GL KSN   RVW   GW+K   FYS
Sbjct: 276 EIPKKFVREYNGVLVQALLSSKMCLKVADGREWNLGLAKSNG--RVWFSDGWQKFAEFYS 335

Query: 119 VKSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDD-DCLDL 178
           +  G+FLVF+YE+ S SF+VV+FD +ATEIEYP K  RLDK +E VK+E+  D+ D + +
Sbjct: 336 LGFGHFLVFRYESQSSSFHVVVFDISATEIEYPAKSIRLDKVEEMVKIESGGDNIDHMVI 395

Query: 179 ---DFKDGDLSSGVKKPTNS---RW-RPPSTGSQQARAMAEANRFQSMTLNPSFICKIWP 238
              DFK G  S  ++KP N    RW + PST SQ+ RAMA+A  FQS TLNP F+CKI  
Sbjct: 396 WLDDFKVGQDSFAIEKPMNGEDRRWMKLPSTASQRERAMAKATDFQSTTLNPCFMCKISH 455

Query: 239 SHIHRTKSLSIPKNFADMNLE-DSITKIILKASDGRMWSGECGFYW-TPKMQRMTFYKYG 298
           SH++  KSL +PK+FA+M+L+ +   ++ L+  DGR+W+  C FY  T +++R T    G
Sbjct: 456 SHVYPGKSLHVPKSFAEMHLKLEGPVELNLEVPDGRIWNARCSFYGATHRIRRRTMLGSG 515

Query: 299 WKSFIRDNNLAVGDFCVFEMTGKNSTTVAFKVESFRAS 324
           WK F RDN+L VGD CVFEM  KNS  ++ KV  F+AS
Sbjct: 516 WKRFARDNSLQVGDVCVFEMMRKNSRRISLKVYIFQAS 551

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BLAST of CsaV3_2G017200 vs. TAIR10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 81.3 bits (199), Expect = 1.2e-15
Identity = 86/332 (25.90%), Postives = 130/332 (39.16%), Query Frame = 0


Query: 60  IPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKSG 119
           +P KFV ++  K  L   + L V DG  W VGL K++N  ++W   GW++ V  YS++ G
Sbjct: 22  VPDKFVSKF--KDELSVAVALTVPDGHVWRVGLRKADN--KIWFQDGWQEFVDRYSIRIG 81

Query: 120 YFLVFKYENPSPSFYVVIFDHTATEIEY-----------PVKKTRLDKAKEKVKMETYFD 179
           Y L+F+YE  S +F V IF+ + +EI Y             K+ RL +  E    E  F 
Sbjct: 82  YLLIFRYEGNS-AFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFEDLEDEDAEVIFP 141

Query: 180 DDCLDLDFKD-------GDLSSGV----------KKPTNSRWRPPS-------------- 239
                    +       G  SS +          ++PT +   P                
Sbjct: 142 SSVYPSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKKRGRKKKNADPEEIN 201

Query: 240 --------------------------TGSQQARAMAEANRFQSMTLNPSFICKIWPSHIH 299
                                     T  ++ RA+  A  F+    NP F   + PS+++
Sbjct: 202 SSAPRDDDPENRSKFYESASARKRTVTAEERERAINAAKTFE--PTNPFFRVVLRPSYLY 261

Query: 300 RTKSLSIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIR 324
           R   + +P  FA+  L   I+  I      + W   C +    K  R  F   GW  F  
Sbjct: 262 RGCIMYLPSGFAEKYL-SGISGFIKVQLAEKQWPVRCLY----KAGRAKF-SQGWYEFTL 321

[Close]

BLAST of CsaV3_2G017200 vs. TAIR10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 64.7 bits (156), Expect = 1.2e-10
Identity = 72/290 (24.83%), Postives = 120/290 (41.38%), Query Frame = 0


Query: 60  IPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKSG 119
           IPRKF      K  L   + LK   G  +NVG+ + +  T  +  +GW+K V  +S++  
Sbjct: 39  IPRKFSTH--CKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAF-RFGWDKFVKDHSLEEN 98

Query: 120 YFLVFKYENPSPSFYVVIFD-HTATE--IEYPVKKTRLDKAKEKVKMETYFDDDCLDLDF 179
             LVFK+   S  F V++FD  T  E    Y V+K      K K     Y  ++ ++ D 
Sbjct: 99  DLLVFKFHGVS-EFEVLVFDGQTLCEKPTSYFVRKCG-HAEKTKASHTGYEQEEHINSDI 158

Query: 180 KDGDLSSGVKKPTN----SRWRPPSTGSQQAR--------------------AMAEANRF 239
                   V  PT+    S  + P +G ++ R                    +  +A   
Sbjct: 159 DTASAQLPVISPTSTVRVSEGKYPLSGFKKMRRELSNDNLDQKADVEMISAGSNKKALSL 218

Query: 240 QSMTLNP-SFICKIWPSHIHRTKSLSIPKNFADMNLEDSITKIILKASDGRMWSGECGFY 299
               ++P  F+  +  SH+     L+IP  +   N+  +  +++++  D   W  +   +
Sbjct: 219 AKRAISPDGFLVFMKRSHVVSKCFLTIPYKWCVKNMLITRQEVVMQV-DQTKWEMKFNIF 278

Query: 300 WTPKMQRMTFYKYGWKSFIRDNNLAVGDFCVFEMTGKNSTTVAFKVESFR 322
                  ++    GWK F++DNNL  GD CVFE     +  +   V  FR
Sbjct: 279 GARGSGGIS---TGWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFR 319

[Close]

BLAST of CsaV3_2G017200 vs. TAIR10
Match: AT1G49475.1 (AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 58.5 bits (140), Expect = 8.6e-09
Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 0


Query: 50  LTSPVLES-KEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWE 109
           L S ++E   ++P +FVR +G K  L D + L+   G + ++ + +   G  VW   GW 
Sbjct: 39  LLSRIIEKMMKVPARFVR-FGPK--LTDNVTLQTPVGFKRSIRIKRI--GDEVWFEKGWS 98

Query: 110 KLVGFYSVKSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKT 153
           +    +S+  G+FL F YE  S  F VVIFD +A+EIEYP+  T
Sbjct: 99  EFAEAHSLSDGHFLFFHYEGDS-CFRVVIFDVSASEIEYPLDDT 136

[Close]

BLAST of CsaV3_2G017200 vs. TAIR10
Match: AT4G01580.1 (AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 57.0 bits (136), Expect = 2.5e-08
Identity = 43/150 (28.67%), Postives = 72/150 (48.00%), Query Frame = 0


Query: 38  FFLLSISSTAPKLTSPVLESKEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNN 97
           FF L + ST         +   IP +FV+  G K  L + + L    G + ++ L +   
Sbjct: 30  FFKLVLPSTMKD------KMMRIPPRFVKLQGSK--LSEVVTLVTPAGYKRSIKLKRI-- 89

Query: 98  GTRVWLHYGWEKLVGFYSVKSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKA 157
           G  +W H GW +    +S++ G+FL+F+Y+  S SF V+IF+ +A E  YP+    +  +
Sbjct: 90  GEEIWFHEGWSEFAEAHSIEEGHFLLFEYKKNS-SFRVIIFNASACETNYPLDAVHIIDS 149

Query: 158 KEKVKMETYFDDDCLDLDFKDGDLSSGVKK 188
                     DDD +++  K+ D     KK
Sbjct: 150 ----------DDDVIEITGKEFDTEHKSKK 158

[Close]

BLAST of CsaV3_2G017200 vs. TAIR10
Match: AT1G49480.1 (related to vernalization1 1)

HSP 1 Score: 49.3 bits (116), Expect = 5.2e-06
Identity = 36/126 (28.57%), Postives = 57/126 (45.24%), Query Frame = 0


Query: 198 TGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSIPKNFADMNLEDSITKIILK 257
           T  ++ RA+  A  F+    NP F   + PS+++R   + +P  FA+  L   I+  I  
Sbjct: 108 TAEERERAVNAAKTFE--PTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYL-SGISGFIKL 167

Query: 258 ASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLAVGDFCVFEMTGKNSTTVAFKV 317
               + W   C +    K  R  F   GW  F  +NN+  GD CVFE+    +     +V
Sbjct: 168 QLGEKQWPVRCLY----KAGRAKF-SQGWYEFTLENNIGEGDVCVFELL--RTRDFVLEV 223

Query: 318 ESFRAS 324
            +FR +
Sbjct: 228 TAFRVN 223

[Close]

BLAST of CsaV3_2G017200 vs. Swiss-Prot
Match: sp|Q8L3W1|VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.2e-14
Identity = 86/332 (25.90%), Postives = 130/332 (39.16%), Query Frame = 0


Query: 60  IPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKSG 119
           +P KFV ++  K  L   + L V DG  W VGL K++N  ++W   GW++ V  YS++ G
Sbjct: 22  VPDKFVSKF--KDELSVAVALTVPDGHVWRVGLRKADN--KIWFQDGWQEFVDRYSIRIG 81

Query: 120 YFLVFKYENPSPSFYVVIFDHTATEIEY-----------PVKKTRLDKAKEKVKMETYFD 179
           Y L+F+YE  S +F V IF+ + +EI Y             K+ RL +  E    E  F 
Sbjct: 82  YLLIFRYEGNS-AFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFEDLEDEDAEVIFP 141

Query: 180 DDCLDLDFKD-------GDLSSGV----------KKPTNSRWRPPS-------------- 239
                    +       G  SS +          ++PT +   P                
Sbjct: 142 SSVYPSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKKRGRKKKNADPEEIN 201

Query: 240 --------------------------TGSQQARAMAEANRFQSMTLNPSFICKIWPSHIH 299
                                     T  ++ RA+  A  F+    NP F   + PS+++
Sbjct: 202 SSAPRDDDPENRSKFYESASARKRTVTAEERERAINAAKTFE--PTNPFFRVVLRPSYLY 261

Query: 300 RTKSLSIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIR 324
           R   + +P  FA+  L   I+  I      + W   C +    K  R  F   GW  F  
Sbjct: 262 RGCIMYLPSGFAEKYL-SGISGFIKVQLAEKQWPVRCLY----KAGRAKF-SQGWYEFTL 321

[Close]

BLAST of CsaV3_2G017200 vs. Swiss-Prot
Match: sp|Q8RYD1|REM16_ARATH (B3 domain-containing protein REM16 OS=Arabidopsis thaliana OX=3702 GN=REM16 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.2e-09
Identity = 72/290 (24.83%), Postives = 120/290 (41.38%), Query Frame = 0


Query: 60  IPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKSG 119
           IPRKF      K  L   + LK   G  +NVG+ + +  T  +  +GW+K V  +S++  
Sbjct: 39  IPRKFSTH--CKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAF-RFGWDKFVKDHSLEEN 98

Query: 120 YFLVFKYENPSPSFYVVIFD-HTATE--IEYPVKKTRLDKAKEKVKMETYFDDDCLDLDF 179
             LVFK+   S  F V++FD  T  E    Y V+K      K K     Y  ++ ++ D 
Sbjct: 99  DLLVFKFHGVS-EFEVLVFDGQTLCEKPTSYFVRKCG-HAEKTKASHTGYEQEEHINSDI 158

Query: 180 KDGDLSSGVKKPTN----SRWRPPSTGSQQAR--------------------AMAEANRF 239
                   V  PT+    S  + P +G ++ R                    +  +A   
Sbjct: 159 DTASAQLPVISPTSTVRVSEGKYPLSGFKKMRRELSNDNLDQKADVEMISAGSNKKALSL 218

Query: 240 QSMTLNP-SFICKIWPSHIHRTKSLSIPKNFADMNLEDSITKIILKASDGRMWSGECGFY 299
               ++P  F+  +  SH+     L+IP  +   N+  +  +++++  D   W  +   +
Sbjct: 219 AKRAISPDGFLVFMKRSHVVSKCFLTIPYKWCVKNMLITRQEVVMQV-DQTKWEMKFNIF 278

Query: 300 WTPKMQRMTFYKYGWKSFIRDNNLAVGDFCVFEMTGKNSTTVAFKVESFR 322
                  ++    GWK F++DNNL  GD CVFE     +  +   V  FR
Sbjct: 279 GARGSGGIS---TGWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFR 319

[Close]

BLAST of CsaV3_2G017200 vs. Swiss-Prot
Match: sp|Q851V1|Y3160_ORYSJ (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0621600 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 3.7e-09
Identity = 80/300 (26.67%), Postives = 123/300 (41.00%), Query Frame = 0


Query: 19  KALALAIALSRWLVVVGHSFFL-LSISSTAPKLTSPVLESKEIPRKFVREYGLKALLKDQ 78
           K    A  + + LV +  S FL  S+    P +   +   K IP +F+  +G K  +   
Sbjct: 6   KTTLRATTMLKVLVKIRLSLFLTFSVLCLMPIMY--MASHKTIPNEFLHNFGGK--IPKS 65

Query: 79  ICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKSGYFLVFKYENPSPSFYVVI 138
           I L+ R G  ++V +TK  N  RV L  GW   V  + +K G FLVFKY   S     +I
Sbjct: 66  IKLETRSGLTFDVQVTK--NSGRVVLQSGWASYVSAHDLKIGDFLVFKYSGDS-QLKTLI 125

Query: 139 FDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDFKDGDLS-SGVKKPTNSRWRPP 198
           FD +  E +   K   +      + M    D+       K  D+S  G  KP+    +  
Sbjct: 126 FDSSGCE-KVCEKPVDMSGRSYDIAMRNSQDE---KKKRKQRDISRQGTVKPSEEGLKAE 185

Query: 199 STGSQQARAMAEANRFQSMTL----------NPSFICKIWPSHIHRTK-SLSIPKNFADM 258
                   +  +  R Q   L           P +   +  S IH    ++ I K +AD+
Sbjct: 186 LVPGCILPSRTDLTRLQKNILIEKVKAINSETPIYGYVMNNSSIHGIPCTVEISKKYADV 245

Query: 259 NLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLAVGDFCVFEM 306
            L      ++L+   G+ W+  C      K     F K GW+ F  DN L +GD C+F++
Sbjct: 246 YLPFEDGTVVLQ-HHGKSWNVRC---CLTKQNSKRFLK-GWRQFAGDNKLHLGDICLFDL 289

[Close]

BLAST of CsaV3_2G017200 vs. Swiss-Prot
Match: sp|Q10GM3|Y3222_ORYSJ (B3 domain-containing protein Os03g0622200 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0622200 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.3e-08
Identity = 65/306 (21.24%), Postives = 116/306 (37.91%), Query Frame = 0


Query: 56  ESKEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYS 115
           ES  +P +F   +     + +++ L+   G+ W++G+  S+ G  V L  GW++ V    
Sbjct: 42  ESMTVPARFANNF--NGHISEEVNLRSPSGETWSIGVANSDAGELV-LQPGWKEFVDGNG 101

Query: 116 VKSGYFLVFKYENPSPSFYVVIFDHTATE------------------------------- 175
           ++ G  L+F+Y   S SF V+IFD +  E                               
Sbjct: 102 IEEGDCLLFRYSGVSSSFDVLIFDPSGCEKASPHFVGSHGFGRAENSAGAEQGGRNGRRT 161

Query: 176 -------------IEYPVKKTRLDKAKEKVKMETYFDD-DCLDLDFKDGDLSSGVKKPTN 235
                        +E  + +          K   + D+ +  + D +D D+ +  +    
Sbjct: 162 PPIVDGDNGHRHHLEMTLHRNSCRSIPRACKRSLFSDETEAKENDGEDEDVVAAAEGGRY 221

Query: 236 SRWRPPSTGSQQARAMAEANRFQSMTL-------NPSFICKIWPSHIHRTK--SLSIPKN 295
             +     G      + E +R +   +       NP F+  I  SH+  +K   + +   
Sbjct: 222 GEYYFSRHGRVAEYNLREEDREEISRVPVPVQPGNPVFVQVIHSSHVRSSKYCIVGVSPE 281

Query: 296 FADMNLEDSITKIIL-KASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLAVGDF 307
           FA   L     +++L +AS G    GE    +  +     FY  GW+ F  DN L   D 
Sbjct: 282 FAGKYLGAVEREVVLERASRG----GEWHVPFVHRQNTRGFYGAGWRQFAGDNRLVAHDV 340

[Close]

BLAST of CsaV3_2G017200 vs. Swiss-Prot
Match: sp|Q9XIB4|Y1475_ARATH (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 1.6e-07
Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 0


Query: 50  LTSPVLES-KEIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWE 109
           L S ++E   ++P +FVR +G K  L D + L+   G + ++ + +   G  VW   GW 
Sbjct: 39  LLSRIIEKMMKVPARFVR-FGPK--LTDNVTLQTPVGFKRSIRIKRI--GDEVWFEKGWS 98

Query: 110 KLVGFYSVKSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKT 153
           +    +S+  G+FL F YE  S  F VVIFD +A+EIEYP+  T
Sbjct: 99  EFAEAHSLSDGHFLFFHYEGDS-CFRVVIFDVSASEIEYPLDDT 136

[Close]

BLAST of CsaV3_2G017200 vs. TrEMBL
Match: tr|A0A0A0LJV0|A0A0A0LJV0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292240 PE=4 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 1.1e-154
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 59  EIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKS 118
           EIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKS
Sbjct: 3   EIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKS 62

Query: 119 GYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDFKD 178
           GYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDFKD
Sbjct: 63  GYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDFKD 122

Query: 179 GDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSI 238
           GDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSI
Sbjct: 123 GDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSI 182

Query: 239 PKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLAVG 298
           PKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLAVG
Sbjct: 183 PKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNLAVG 242

Query: 299 DFCVFEMTGKNSTTVAFKVESFRAS 324
           DFCVFEMTGKNSTTVAFKVESFRAS
Sbjct: 243 DFCVFEMTGKNSTTVAFKVESFRAS 267

[Close]

BLAST of CsaV3_2G017200 vs. TrEMBL
Match: tr|A0A1S3C7C6|A0A1S3C7C6_CUCME (putative B3 domain-containing protein Os03g0621600 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497524 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 4.7e-134
Identity = 234/266 (87.97%), Postives = 248/266 (93.23%), Query Frame = 0


Query: 59  EIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKS 118
           EIPRKFVREYGL+ALLKDQ+CLKVRDGKEWNVGLTKSNNGTRVW HYGWEKLV FYSVKS
Sbjct: 41  EIPRKFVREYGLQALLKDQVCLKVRDGKEWNVGLTKSNNGTRVWFHYGWEKLVEFYSVKS 100

Query: 119 GYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDDCLDLDFKD 178
           GYFLVFKYEN S S YVVIFD TATEIEYPVKK  LDK+KE+VKMETYFDDD LDLDFKD
Sbjct: 101 GYFLVFKYENQSSSLYVVIFDRTATEIEYPVKKISLDKSKERVKMETYFDDD-LDLDFKD 160

Query: 179 GDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSI 238
           GDLS GVKKPTNSRW+PPSTGSQQARAMA+ANRFQSMTLNPSFICK+WPSHIHRTKSLSI
Sbjct: 161 GDLSFGVKKPTNSRWKPPSTGSQQARAMAKANRFQSMTLNPSFICKVWPSHIHRTKSLSI 220

Query: 239 PKNFADMNLEDSITKIILKASDGRMWSGECGFYWTP-KMQRMTFYKYGWKSFIRDNNLAV 298
           PK+FADM++EDS TKIILKASDGRMWSG CGFYWTP KMQRMT++KYGWKSFIRDN L V
Sbjct: 221 PKSFADMHVEDSTTKIILKASDGRMWSGGCGFYWTPYKMQRMTYFKYGWKSFIRDNYLTV 280

Query: 299 GDFCVFEMTGKNSTTVAFKVESFRAS 324
           GDFCVFEMTGKN TT++FKVE F AS
Sbjct: 281 GDFCVFEMTGKNCTTISFKVEIFTAS 305

[Close]

BLAST of CsaV3_2G017200 vs. TrEMBL
Match: tr|A0A1S4E1Q2|A0A1S4E1Q2_CUCME (uncharacterized protein LOC103497524 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497524 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 1.3e-128
Identity = 233/303 (76.90%), Postives = 248/303 (81.85%), Query Frame = 0


Query: 59  EIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKS 118
           EIPRKFVREYGL+ALLKDQ+CLKVRDGKEWNVGLTKSNNGTRVW HYGWEKLV FYSVKS
Sbjct: 41  EIPRKFVREYGLQALLKDQVCLKVRDGKEWNVGLTKSNNGTRVWFHYGWEKLVEFYSVKS 100

Query: 119 GYFLVFKYENPSPSFYVVIFDHTATEIEYPVKKTRLDKAKEKVKMETYFDDD-------C 178
           GYFLVFKYEN S S YVVIFD TATEIEYPVKK  LDK+KE+VKMETYFDDD       C
Sbjct: 101 GYFLVFKYENQSSSLYVVIFDRTATEIEYPVKKISLDKSKERVKMETYFDDDLDLGMFLC 160

Query: 179 LD------------------------------LDFKDGDLSSGVKKPTNSRWRPPSTGSQ 238
           L                               +DFKDGDLS GVKKPTNSRW+PPSTGSQ
Sbjct: 161 LRTPFFLIVYLRYICFSMHALHYLFILSNFYFIDFKDGDLSFGVKKPTNSRWKPPSTGSQ 220

Query: 239 QARAMAEANRFQSMTLNPSFICKIWPSHIHRTKSLSIPKNFADMNLEDSITKIILKASDG 298
           QARAMA+ANRFQSMTLNPSFICK+WPSHIHRTKSLSIPK+FADM++EDS TKIILKASDG
Sbjct: 221 QARAMAKANRFQSMTLNPSFICKVWPSHIHRTKSLSIPKSFADMHVEDSTTKIILKASDG 280

Query: 299 RMWSGECGFYWTP-KMQRMTFYKYGWKSFIRDNNLAVGDFCVFEMTGKNSTTVAFKVESF 324
           RMWSG CGFYWTP KMQRMT++KYGWKSFIRDN L VGDFCVFEMTGKN TT++FKVE F
Sbjct: 281 RMWSGGCGFYWTPYKMQRMTYFKYGWKSFIRDNYLTVGDFCVFEMTGKNCTTISFKVEIF 340

[Close]

BLAST of CsaV3_2G017200 vs. TrEMBL
Match: tr|A0A1S4E1R1|A0A1S4E1R1_CUCME (B3 domain-containing protein At3g18960-like OS=Cucumis melo OX=3656 GN=LOC103497525 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.6e-70
Identity = 148/268 (55.22%), Postives = 183/268 (68.28%), Query Frame = 0


Query: 59  EIPRKFVREYGLKALLKDQICLKV-RDGKEWNVGLTKSNNGTRVWLH-YGWEKLVGFYSV 118
           EIPRKFVREYG+KA   +QICLKV  DG++WNV LTK+N+GTRVW H  GW+  V FYSV
Sbjct: 39  EIPRKFVREYGVKAFATNQICLKVAADGRKWNVRLTKTNDGTRVWFHDDGWQMFVEFYSV 98

Query: 119 KSGYFLVFKYENPSPSFYVVIFDHTATEIEYPVK-KTRLDKAKEKVKMETYFDDDCLDLD 178
              YFLVFKYE  S SFYVVIFD TATEIEYP+K    +D A+EKVK ET    + +D  
Sbjct: 99  GLEYFLVFKYERQSSSFYVVIFDRTATEIEYPMKIIICIDDAEEKVKKETNISQELMD-- 158

Query: 179 FKDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHRTKS 238
                         N +    +T SQ+ +AMA A  FQSMT+NPSF+CK+ PSHIHR  S
Sbjct: 159 --------------NKKKLRSTTTSQREKAMANATAFQSMTINPSFLCKMSPSHIHR--S 218

Query: 239 LSIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRDNNL 298
           L++PK F +M++E S+ + IL+ SDGR W G C FY   +M++       W+ F +DNNL
Sbjct: 219 LNVPKRFVEMHIEKSM-ESILQVSDGRTWEGSCCFYMNKRMKKRAELASSWRKFKKDNNL 278

Query: 299 AVGDFCVFEMTGKNSTTVAFKVESFRAS 324
            VGDFCVFEM GK+ST ++FKVE FRAS
Sbjct: 279 KVGDFCVFEMIGKSSTRISFKVEIFRAS 287

[Close]

BLAST of CsaV3_2G017200 vs. TrEMBL
Match: tr|A0A1S3C6V0|A0A1S3C6V0_CUCME (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=LOC103497522 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.8e-30
Identity = 107/329 (32.52%), Postives = 153/329 (46.50%), Query Frame = 0


Query: 59  EIPRKFVREYGLKALLKDQICLKVRDGKEWNVGLTKSNNGTRVWLHYGWEKLVGFYSVKS 118
           E+P KFV+  G  ++L +++ L + DG  W + L KS+   +++   GW + V FYSV+ 
Sbjct: 66  ELPNKFVKNNG-GSMLFNKVTLFLPDGANWKIQLKKSDG--KIFFRRGWPEFVQFYSVQP 125

Query: 119 GYFLVFKYENPSPSFYVVIFDHTATEIEYPV---------------------------KK 178
           GYFLVF+ +     F V+IFD +ATEI+YP+                           KK
Sbjct: 126 GYFLVFQLKGIC-CFNVLIFDTSATEIDYPIRGLLDIIPKSRNEDEEESIQILNEMVLKK 185

Query: 179 TRLDKAKE------------------KVKME----TYFDDDCLDLDF------------- 238
            R++K +E                  KVK+        D+D  DL+              
Sbjct: 186 RRMEKEEETPAYRSLRGLKKMMRKNAKVKIAKNRGITSDEDEEDLETDNSRRQSNHRGTA 245

Query: 239 ----KDGDLSSGVKKPTNSRWRPPSTGSQQARAMAEANRFQSMTLNPSFICKIWPSHIHR 298
                DG +S    +P N R  PP+    Q      A+RF+S   NPSF+  + PS+I  
Sbjct: 246 YNEGDDGRVSPESMRPMNPRKTPPALTENQLAVKKRASRFKSRRNNPSFMVTMRPSYIQT 305

Query: 299 TKSLSIPKNFADMNLEDSITKIILKASDGRMWSGECGFYWTPKMQRMTFYKYGWKSFIRD 322
              LS+P+ F +  +++S+  + L+  DGR W   CG  W    +R T  K GWK F  D
Sbjct: 306 GNYLSLPRRFGERYIKESV-DVKLEVGDGRSWRVWCGVRWA-FTRRRTELKGGWKRFAVD 365

The following BLAST results are available for this feature:

BLAST of CsaV3_2G017200 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN62043.1	1.6e-154	100.00	hypothetical protein Csa_2G292240 [Cucumis sativus]	[more]
XP_008457959.1	7.1e-134	87.97	PREDICTED: putative B3 domain-containing protein Os03g0621600 isoform X2 [Cucumi...	[more]
XP_016902156.1	2.0e-128	76.90	PREDICTED: uncharacterized protein LOC103497524 isoform X1 [Cucumis melo]	[more]
XP_016902162.1	2.5e-70	55.22	PREDICTED: B3 domain-containing protein At3g18960-like [Cucumis melo]	[more]
XP_022158239.1	2.8e-66	51.80	B3 domain-containing transcription factor VRN1-like [Momordica charantia]	[more]

BLAST of CsaV3_2G017200 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18990.1	1.2e-15	25.90	AP2/B3-like transcriptional factor family protein	[more]
AT4G33280.1	1.2e-10	24.83	AP2/B3-like transcriptional factor family protein	[more]
AT1G49475.1	8.6e-09	37.50	AP2/B3-like transcriptional factor family protein	[more]
AT4G01580.1	2.5e-08	28.67	AP2/B3-like transcriptional factor family protein	[more]
AT1G49480.1	5.2e-06	28.57	related to vernalization1 1	[more]

BLAST of CsaV3_2G017200 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8L3W1\|VRN1_ARATH	2.2e-14	25.90	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q8RYD1\|REM16_ARATH	2.2e-09	24.83	B3 domain-containing protein REM16 OS=Arabidopsis thaliana OX=3702 GN=REM16 PE=2...	[more]
sp\|Q851V1\|Y3160_ORYSJ	3.7e-09	26.67	Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japoni...	[more]
sp\|Q10GM3\|Y3222_ORYSJ	5.3e-08	21.24	B3 domain-containing protein Os03g0622200 OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|Q9XIB4\|Y1475_ARATH	1.6e-07	37.50	B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49...	[more]

BLAST of CsaV3_2G017200 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LJV0\|A0A0A0LJV0_CUCSA	1.1e-154	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292240 PE=4 SV=1	[more]
tr\|A0A1S3C7C6\|A0A1S3C7C6_CUCME	4.7e-134	87.97	putative B3 domain-containing protein Os03g0621600 isoform X2 OS=Cucumis melo OX...	[more]
tr\|A0A1S4E1Q2\|A0A1S4E1Q2_CUCME	1.3e-128	76.90	uncharacterized protein LOC103497524 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S4E1R1\|A0A1S4E1R1_CUCME	1.6e-70	55.22	B3 domain-containing protein At3g18960-like OS=Cucumis melo OX=3656 GN=LOC103497...	[more]
tr\|A0A1S3C6V0\|A0A1S3C6V0_CUCME	2.8e-30	32.52	B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=L...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR015300	DNA-bd_pseudobarrel_sf
IPR003340	B3_DNA-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_2G017200.1	CsaV3_2G017200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 222..319 e-value: 1.5E-7 score: 41.1 coord: 45..141 e-value: 3.1E-7 score: 40.0
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 225..316 e-value: 2.5E-16 score: 59.3 coord: 51..140 e-value: 2.3E-13 score: 49.7
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 60..141 score: 11.025
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 221..319 score: 13.338
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 227..321 e-value: 2.0045E-17 score: 75.0569
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 60..139 e-value: 6.20262E-16 score: 70.8197
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	G3DSA:2.40.330.10		coord: 197..323 e-value: 3.2E-25 score: 90.2
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	G3DSA:2.40.330.10		coord: 44..143 e-value: 1.2E-18 score: 68.9
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	SSF101936	DNA-binding pseudobarrel domain	coord: 57..140
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	SSF101936	DNA-binding pseudobarrel domain	coord: 218..313
None	No IPR available	PANTHER	PTHR31920	FAMILY NOT NAMED	coord: 192..322
None	No IPR available	PANTHER	PTHR31920	FAMILY NOT NAMED	coord: 50..169
None	No IPR available	PANTHER	PTHR31920:SF22	B3 DOMAIN-CONTAINING PROTEIN REM19-RELATED	coord: 50..169
None	No IPR available	PANTHER	PTHR31920:SF22	B3 DOMAIN-CONTAINING PROTEIN REM19-RELATED	coord: 192..322

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_2G017200	CsGy2G014650	Cucumber (Gy14) v2	cgybcucB064
CsaV3_2G017200	MELO3C007523	Melon (DHL92) v3.5.1	cucmeB156

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_2G017200	CsaV3_6G042830	Cucumber (Chinese Long) v3	cuccucB093

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_2G017200	Silver-seed gourd	carcucB1036
CsaV3_2G017200	Silver-seed gourd	carcucB1103
CsaV3_2G017200	Cucumber (Gy14) v2	cgybcucB068
CsaV3_2G017200	Cucumber (Gy14) v1	cgycucB557
CsaV3_2G017200	Cucurbita maxima (Rimu)	cmacucB0652
CsaV3_2G017200	Cucurbita maxima (Rimu)	cmacucB0697
CsaV3_2G017200	Cucurbita maxima (Rimu)	cmacucB0777
CsaV3_2G017200	Cucurbita moschata (Rifu)	cmocucB0638
CsaV3_2G017200	Cucurbita moschata (Rifu)	cmocucB0682
CsaV3_2G017200	Cucurbita moschata (Rifu)	cmocucB0685
CsaV3_2G017200	Cucurbita pepo (Zucchini)	cpecucB0335
CsaV3_2G017200	Cucurbita pepo (Zucchini)	cpecucB0890
CsaV3_2G017200	Wild cucumber (PI 183967)	cpicucB080
CsaV3_2G017200	Melon (DHL92) v3.5.1	cucmeB102
CsaV3_2G017200	Melon (DHL92) v3.6.1	cucmedB095
CsaV3_2G017200	Watermelon (Charleston Gray)	cucwcgB134
CsaV3_2G017200	Watermelon (97103) v1	cucwmB153
CsaV3_2G017200	Watermelon (97103) v2	cucwmbB120
CsaV3_2G017200	Wax gourd	cucwgoB181