CsaV3_2G012020 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGTGTTTAATCTTGAGAACTCAGATACTTTTTTGGATGCATTATACCTTCTATCTAGATTTCGTGAAGATGCCAACATTGAATGGTCTCCATCAATGTTTTCCATAACAATTCCTCATCATTACATTGAATTGAATGTAGCCTTTCAAATGATGCCTCAATTCTTCAATTACTACTTCTCCAACACCACTCACATTTCAAAGGTCCACCTTCAACCATTATTCTATACCATCAAATCCATGAAAGAATACCAATACTCTTCAATGTCTCTCTTTCTTTTCAAGAATCTTGAACGCTTACTCATCAAATTTTACTCTCCAAGTTAGTACTTTTGTCGTCATTATTCTTTTTAATTGCCTCATTCTTGCACTCTTTTGTAATTAATTTCTCTCAAGGATTTCAAGCATTAATCTTGCTTTCTTTTTCTTTTTCTTTTCTTTTTTCTGTTTGATTATTAGGGGAAGAGTTACCCTTGATTCGCAAATTTGGAGTTAGGTATGCGGTATTTGAGGATTTCGGAAACGTTGATTTTGAAATCTTTGTTTCAATTGATTCACTACAATTTAGACACATTATACAAGAGTGTCGTGATTATATGGGTACTATATACATATAATTCTATCTTTTTTTTTTCTTTTTCTTACTATATCCCAAATTACTTATTTGTAAGAATATGATTTATGAGGTTTTTTTCCTAATAATCTGTTCTTGTATTCTGCAGTTCGTGTTACTCCAACACATTCACATGTTAGGTTCTGTAATGAAGTTAAGGAGATCATTTTTAAGAAAGAGGTATTGTCTTTTTGTTTTTCCTTCTTTTTGGGTTTCAAAACTCAAGTCAAATTTTTTAATATGACCAAAGGAAAAAAGGTTTCTAAAAACAAAGTGATGTTTGAAAAACTAAAAAAAAAAAATTAAAAAACTTCCTCACTAATAACAATTTTGTTTTATTTTTCTATTTTTGAAAGTTATAGTTGTTTCTTTAGCATGGATTTCACTTTTTTTTCAAGAAACATTTGTATTATAATATACAAAGACAAGATTTTGAAAATGAGAAAAACTAGTTTCAAAACACTTGTTCTTTTTTTCCGGAAAATTAGCTTTAATTAAATTAACAAAGATTGATATCTTTTTATTTATTTATTTTATAATTTGATTAAGAATAAGATGATAGCAATGACATTGTTAAGAAGTGCTTTTTTTTAATAGCATGTTAAAGAAAATTTCTAGAAGTAAATTACACAGTTGTAAAAAACCAAGGGTTAGCATATAAGGCCAGAGATTTTAAAAAATTTCTTTTTTATCAAAAACTGACTAAGAAATCAAATGTTTAGTTAAGAAAGAGGAAAAACTCATGCTATATAAGGTAAGAAGTAAACCAACAAAAGTTTAAAAAACTAAAAGCCAAATTATTGACGAGGAAGAGCATAAAGATTTGAATATAAAATTACATTGTATAAAACACAGGACAAATTTAATATGATTTATGATTAGTTGATGTGATTTTGTATAGGAAGGAGAATGCATAATTGAAGGTGTTGGGAAAGGGCCAGCAGTTGAATTTCTAATACCTGTTTATCCAACTCATGTTTATTATAACATCACTTTTCAAGCACAGAGAGTATGGTTGTTCAAGTCAGCTGATAAATGTGGTACTTTCATTATTGCTCCTGTTGGACTCTTTGCTCAATTTGCCATCTATTTTCCTCTAGGCTGACTTGTCAAATGTGTAATACTTTTGAATTACATCAATATATATGCACATAATAATCCTACCTCCTTGTGCTTATAATGTAATGTGACTGTCTTTTCTTTGCCAAACC ATGTTGGTGTTTAATCTTGAGAACTCAGATACTTTTTTGGATGCATTATACCTTCTATCTAGATTTCGTGAAGATGCCAACATTGAATGGTCTCCATCAATGTTTTCCATAACAATTCCTCATCATTACATTGAATTGAATGTAGCCTTTCAAATGATGCCTCAATTCTTCAATTACTACTTCTCCAACACCACTCACATTTCAAAGGTCCACCTTCAACCATTATTCTATACCATCAAATCCATGAAAGAATACCAATACTCTTCAATGTCTCTCTTTCTTTTCAAGAATCTTGAACGCTTACTCATCAAATTTTACTCTCCAAGGGAAGAGTTACCCTTGATTCGCAAATTTGGAGTTAGGTATGCGGTATTTGAGGATTTCGGAAACGTTGATTTTGAAATCTTTGTTTCAATTGATTCACTACAATTTAGACACATTATACAAGAGTGTCGTGATTATATGGTTCGTGTTACTCCAACACATTCACATGTTAGGTTCTGTAATGAAGTTAAGGAGATCATTTTTAAGAAAGAGGAAGGAGAATGCATAATTGAAGGTGTTGGGAAAGGGCCAGCAGTTGAATTTCTAATACCTGTTTATCCAACTCATGTTTATTATAACATCACTTTTCAAGCACAGAGAGTATGGTTGTTCAAGTCAGCTGATAAATGTGGTACTTTCATTATTGCTCCTGTTGGACTCTTTGCTCAATTTGCCATCTATTTTCCTCTAGGCTGA ATGTTGGTGTTTAATCTTGAGAACTCAGATACTTTTTTGGATGCATTATACCTTCTATCTAGATTTCGTGAAGATGCCAACATTGAATGGTCTCCATCAATGTTTTCCATAACAATTCCTCATCATTACATTGAATTGAATGTAGCCTTTCAAATGATGCCTCAATTCTTCAATTACTACTTCTCCAACACCACTCACATTTCAAAGGTCCACCTTCAACCATTATTCTATACCATCAAATCCATGAAAGAATACCAATACTCTTCAATGTCTCTCTTTCTTTTCAAGAATCTTGAACGCTTACTCATCAAATTTTACTCTCCAAGGGAAGAGTTACCCTTGATTCGCAAATTTGGAGTTAGGTATGCGGTATTTGAGGATTTCGGAAACGTTGATTTTGAAATCTTTGTTTCAATTGATTCACTACAATTTAGACACATTATACAAGAGTGTCGTGATTATATGGTTCGTGTTACTCCAACACATTCACATGTTAGGTTCTGTAATGAAGTTAAGGAGATCATTTTTAAGAAAGAGGAAGGAGAATGCATAATTGAAGGTGTTGGGAAAGGGCCAGCAGTTGAATTTCTAATACCTGTTTATCCAACTCATGTTTATTATAACATCACTTTTCAAGCACAGAGAGTATGGTTGTTCAAGTCAGCTGATAAATGTGGTACTTTCATTATTGCTCCTGTTGGACTCTTTGCTCAATTTGCCATCTATTTTCCTCTAGGCTGA MLVFNLENSDTFLDALYLLSRFREDANIEWSPSMFSITIPHHYIELNVAFQMMPQFFNYYFSNTTHISKVHLQPLFYTIKSMKEYQYSSMSLFLFKNLERLLIKFYSPREELPLIRKFGVRYAVFEDFGNVDFEIFVSIDSLQFRHIIQECRDYMVRVTPTHSHVRFCNEVKEIIFKKEEGECIIEGVGKGPAVEFLIPVYPTHVYYNITFQAQRVWLFKSADKCGTFIIAPVGLFAQFAIYFPLG
BLAST of CsaV3_2G012020 vs. NCBI nr
Match: XP_011650141.1 (PREDICTED: uncharacterized protein LOC101209763 [Cucumis sativus]) HSP 1 Score: 466.1 bits (1198), Expect = 7.5e-128 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
BLAST of CsaV3_2G012020 vs. NCBI nr
Match: KGN45635.1 (hypothetical protein Csa_6G002300 [Cucumis sativus]) HSP 1 Score: 366.7 bits (940), Expect = 6.2e-98 Identity = 175/244 (71.72%), Postives = 205/244 (84.02%), Query Frame = 0
BLAST of CsaV3_2G012020 vs. NCBI nr
Match: XP_008457262.2 (PREDICTED: uncharacterized protein LOC103496987 [Cucumis melo]) HSP 1 Score: 325.5 bits (833), Expect = 1.6e-85 Identity = 156/165 (94.55%), Postives = 160/165 (96.97%), Query Frame = 0
BLAST of CsaV3_2G012020 vs. NCBI nr
Match: KGN61522.1 (hypothetical protein Csa_2G154090 [Cucumis sativus]) HSP 1 Score: 325.1 bits (832), Expect = 2.1e-85 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of CsaV3_2G012020 vs. NCBI nr
Match: XP_008458681.1 (PREDICTED: uncharacterized protein LOC103498009 [Cucumis melo]) HSP 1 Score: 297.4 bits (760), Expect = 4.6e-77 Identity = 154/246 (62.60%), Postives = 185/246 (75.20%), Query Frame = 0
BLAST of CsaV3_2G012020 vs. TrEMBL
Match: tr|A0A0A0K7E0|A0A0A0K7E0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002300 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 4.1e-98 Identity = 175/244 (71.72%), Postives = 205/244 (84.02%), Query Frame = 0
BLAST of CsaV3_2G012020 vs. TrEMBL
Match: tr|A0A1S3C5S9|A0A1S3C5S9_CUCME (uncharacterized protein LOC103496987 OS=Cucumis melo OX=3656 GN=LOC103496987 PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 1.0e-85 Identity = 156/165 (94.55%), Postives = 160/165 (96.97%), Query Frame = 0
BLAST of CsaV3_2G012020 vs. TrEMBL
Match: tr|A0A0A0LLD1|A0A0A0LLD1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G154090 PE=4 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 1.4e-85 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of CsaV3_2G012020 vs. TrEMBL
Match: tr|A0A1S3C7Y9|A0A1S3C7Y9_CUCME (uncharacterized protein LOC103498009 OS=Cucumis melo OX=3656 GN=LOC103498009 PE=4 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 3.1e-77 Identity = 154/246 (62.60%), Postives = 185/246 (75.20%), Query Frame = 0
BLAST of CsaV3_2G012020 vs. TrEMBL
Match: tr|A0A1S3C8E9|A0A1S3C8E9_CUCME (uncharacterized protein LOC103498005 OS=Cucumis melo OX=3656 GN=LOC103498005 PE=4 SV=1) HSP 1 Score: 141.4 bits (355), Expect = 2.8e-30 Identity = 88/245 (35.92%), Postives = 139/245 (56.73%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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