CsaV3_2G011750 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G011750
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2 : 9080397 .. 9081052 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAGTGAAGAAGTAGCAATTGGCGAAAAACTAGATTTGGAACATGAGGTCACCAAAATGTGACGTCGAACGCATTGAAGAGGTTGAGTGTGTACTATGCGAGCTGTGAGGTCTTTGTGTTGGGTGGGGCAAAAAGATAAACACAAAAAGAAAAAACTAAAAATGGTGTTATTTAAGATTATATATATACATGTATATATATACATACATACATATATATATATATATATATGTATGTATGTATGTATGTATGTATGTATGTATGTATATATATATATATGTATGTATGTATGTATGTATGTATATATATATATATATATATATATATATATATATATATATATATATATATATGTATGTATGTATCCCTAAATTGGGTAACCTGACCCATTTTTTTCAATTCTTTAACCTGACCCAACCCAAAACATAATTTAACCCAACCAATCCTTGCGACTAGGGTTGGGTAGTTCGAGTTGGTCGAGTTACCGAGTTTTTTAACACCTCTACGTACCAGTGGTAACAAGTATGAGCAGAAGAAGCATGTGGTGGAGCTTCAGGGGGTAGAAGGTGGGCAACAAATTGCATTGTTGAGGTGCTTGGGGAAAAATCATGTTGTGGTGAAGCTAATAGCATTATGGTGGAGCTTGGGGTGA

mRNA sequence

ATGACGAGTGAAGAAGTAGCAATTGGCGAAAAACTAGATTTGGAACATGAGGTCACCAAAATTGGTAACAAGTATGAGCAGAAGAAGCATGTGGTGGAGCTTCAGGGGGTAGAAGGTGGGCAACAAATTGCATTGTTGAGGTGCTTGGGGAAAAATCATGTTGTGGTGAAGCTAATAGCATTATGGTGGAGCTTGGGGTGA

Coding sequence (CDS)

ATGACGAGTGAAGAAGTAGCAATTGGCGAAAAACTAGATTTGGAACATGAGGTCACCAAAATTGGTAACAAGTATGAGCAGAAGAAGCATGTGGTGGAGCTTCAGGGGGTAGAAGGTGGGCAACAAATTGCATTGTTGAGGTGCTTGGGGAAAAATCATGTTGTGGTGAAGCTAATAGCATTATGGTGGAGCTTGGGGTGA

Protein sequence

MTSEEVAIGEKLDLEHEVTKIGNKYEQKKHVVELQGVEGGQQIALLRCLGKNHVVVKLIALWWSLG
Homology
[Close]
BLAST of CsaV3_2G011750 vs. NCBI nr
Match: KGN61494.1 (hypothetical protein Csa_2G147410 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 8.3e-29
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MTSEEVAIGEKLDLEHEVTKIGNKYEQKKHVVELQGVEGGQQIALLRCLGKNHVVVKLIA 60
          MTSEEVAIGEKLDLEHEVTKIGNKYEQKKHVVELQGVEGGQQIALLRCLGKNHVVVKLIA
Sbjct: 1  MTSEEVAIGEKLDLEHEVTKIGNKYEQKKHVVELQGVEGGQQIALLRCLGKNHVVVKLIA 60

Query: 61 LWWSLG 67
          LWWSLG
Sbjct: 61 LWWSLG 66

[Close]
BLAST of CsaV3_2G011750 vs. TrEMBL
Match: tr|A0A0A0LKE7|A0A0A0LKE7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G147410 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.5e-29
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MTSEEVAIGEKLDLEHEVTKIGNKYEQKKHVVELQGVEGGQQIALLRCLGKNHVVVKLIA 60
          MTSEEVAIGEKLDLEHEVTKIGNKYEQKKHVVELQGVEGGQQIALLRCLGKNHVVVKLIA
Sbjct: 1  MTSEEVAIGEKLDLEHEVTKIGNKYEQKKHVVELQGVEGGQQIALLRCLGKNHVVVKLIA 60

Query: 61 LWWSLG 67
          LWWSLG
Sbjct: 61 LWWSLG 66

The following BLAST results are available for this feature:
BLAST of CsaV3_2G011750 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61494.18.3e-29100.00hypothetical protein Csa_2G147410 [Cucumis sativus][more]
BLAST of CsaV3_2G011750 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G011750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G011750 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LKE7|A0A0A0LKE7_CUCSA5.5e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G147410 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G011750.1CsaV3_2G011750.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G011750Wax gourdcucwgoB133
CsaV3_2G011750Silver-seed gourdcarcucB0257
CsaV3_2G011750Silver-seed gourdcarcucB1122
CsaV3_2G011750Cucumber (Gy14) v2cgybcucB064
CsaV3_2G011750Cucumber (Gy14) v1cgycucB309
CsaV3_2G011750Cucurbita moschata (Rifu)cmocucB1028
CsaV3_2G011750Cucurbita maxima (Rimu)cmacucB0424
CsaV3_2G011750Cucurbita maxima (Rimu)cmacucB1047
CsaV3_2G011750Cucurbita moschata (Rifu)cmocucB0417
CsaV3_2G011750Cucurbita moschata (Rifu)cmocucB1031
CsaV3_2G011750Cucurbita pepo (Zucchini)cpecucB0151
CsaV3_2G011750Cucurbita pepo (Zucchini)cpecucB0375
CsaV3_2G011750Wild cucumber (PI 183967)cpicucB080
CsaV3_2G011750Bottle gourd (USVL1VR-Ls)cuclsiB101
CsaV3_2G011750Melon (DHL92) v3.5.1cucmeB136
CsaV3_2G011750Melon (DHL92) v3.6.1cucmedB129
CsaV3_2G011750Watermelon (Charleston Gray)cucwcgB155
CsaV3_2G011750Watermelon (97103) v1cucwmB179
CsaV3_2G011750Watermelon (97103) v2cucwmbB142