CsaV3_2G010890 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGACGCGAACACACTAGCAGCCGACTGCATTGTCATATGCTGCTGCTGTCAATGCCTGGCGTTGCAGATCATTCTCCTTTTGTTCCTCAAGCTTCCATGGAAACTCGTTCGAAAGACAAGAGAGTTTGCAAAGAAAAGGCTGAGACTGAGAGAAAAAGAGGAGAAGATGGTAGGGAAAGAAAAGGGTTGTGGGAATGAGGTTAGAGGAATTAGTAATGGAAGTTGTATGAGAAATGAAGAAAAGGGATTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAAGGTTATGCAGGATTTGCATGAGAAAGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAATGGTAATACAAGTTCAGGTTCCTGCAGAGATGATCTGTTTAGTCCTACAAATGTACAGTATCAATTAATTCAAGTAATTCCTTCCACATGA ATGGAAGACGCGAACACACTAGCAGCCGACTGCATTGTCATATGCTGCTGCTGTCAATGCCTGGCGTTGCAGATCATTCTCCTTTTGTTCCTCAAGCTTCCATGGAAACTCGTTCGAAAGACAAGAGAGTTTGCAAAGAAAAGGCTGAGACTGAGAGAAAAAGAGGAGAAGATGGTAGGGAAAGAAAAGGGTTGTGGGAATGAGGTTAGAGGAATTAGTAATGGAAGTTGTATGAGAAATGAAGAAAAGGGATTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAAGGTTATGCAGGATTTGCATGAGAAAGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAATGGTAATACAAGTTCAGGTTCCTGCAGAGATGATCTGTTTAGTCCTACAAATGTACAGTATCAATTAATTCAAGTAATTCCTTCCACATGA ATGGAAGACGCGAACACACTAGCAGCCGACTGCATTGTCATATGCTGCTGCTGTCAATGCCTGGCGTTGCAGATCATTCTCCTTTTGTTCCTCAAGCTTCCATGGAAACTCGTTCGAAAGACAAGAGAGTTTGCAAAGAAAAGGCTGAGACTGAGAGAAAAAGAGGAGAAGATGGTAGGGAAAGAAAAGGGTTGTGGGAATGAGGTTAGAGGAATTAGTAATGGAAGTTGTATGAGAAATGAAGAAAAGGGATTGGGTTTGAGTTGTTGTATGGAAGAGATTGAGAAGGTTATGCAGGATTTGCATGAGAAAGGAGAGTTTGGTTTTGGAAGCTTTTGGGGAAATGGTAATACAAGTTCAGGTTCCTGCAGAGATGATCTGTTTAGTCCTACAAATGTACAGTATCAATTAATTCAAGTAATTCCTTCCACATGA MEDANTLAADCIVICCCCQCLALQIILLLFLKLPWKLVRKTREFAKKRLRLREKEEKMVGKEKGCGNEVRGISNGSCMRNEEKGLGLSCCMEEIEKVMQDLHEKGEFGFGSFWGNGNTSSGSCRDDLFSPTNVQYQLIQVIPST
BLAST of CsaV3_2G010890 vs. NCBI nr
Match: XP_011649060.1 (PREDICTED: uncharacterized protein LOC105434576 [Cucumis sativus] >KGN61402.1 hypothetical protein Csa_2G116260 [Cucumis sativus]) HSP 1 Score: 250.8 bits (639), Expect = 2.9e-63 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of CsaV3_2G010890 vs. NCBI nr
Match: XP_022928895.1 (uncharacterized protein LOC111435666 [Cucurbita moschata]) HSP 1 Score: 183.3 bits (464), Expect = 5.7e-43 Identity = 119/146 (81.51%), Postives = 129/146 (88.36%), Query Frame = 0
BLAST of CsaV3_2G010890 vs. NCBI nr
Match: XP_023551308.1 (uncharacterized protein LOC111809163 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 177.6 bits (449), Expect = 3.1e-41 Identity = 118/146 (80.82%), Postives = 129/146 (88.36%), Query Frame = 0
BLAST of CsaV3_2G010890 vs. NCBI nr
Match: XP_008457185.1 (PREDICTED: uncharacterized protein LOC103496924 [Cucumis melo]) HSP 1 Score: 177.2 bits (448), Expect = 4.1e-41 Identity = 115/145 (79.31%), Postives = 118/145 (81.38%), Query Frame = 0
BLAST of CsaV3_2G010890 vs. NCBI nr
Match: XP_022969822.1 (uncharacterized protein LOC111468906 [Cucurbita maxima]) HSP 1 Score: 173.7 bits (439), Expect = 4.5e-40 Identity = 116/146 (79.45%), Postives = 127/146 (86.99%), Query Frame = 0
BLAST of CsaV3_2G010890 vs. TAIR10
Match: AT3G25597.1 (unknown protein) HSP 1 Score: 55.1 bits (131), Expect = 4.3e-08 Identity = 44/146 (30.14%), Postives = 69/146 (47.26%), Query Frame = 0
BLAST of CsaV3_2G010890 vs. TAIR10
Match: AT1G68700.1 (unknown protein) HSP 1 Score: 46.6 bits (109), Expect = 1.5e-05 Identity = 24/57 (42.11%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of CsaV3_2G010890 vs. TrEMBL
Match: tr|A0A0A0LKX5|A0A0A0LKX5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G116260 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 1.9e-63 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of CsaV3_2G010890 vs. TrEMBL
Match: tr|A0A1S3C4I0|A0A1S3C4I0_CUCME (uncharacterized protein LOC103496924 OS=Cucumis melo OX=3656 GN=LOC103496924 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 2.7e-41 Identity = 115/145 (79.31%), Postives = 118/145 (81.38%), Query Frame = 0
BLAST of CsaV3_2G010890 vs. TrEMBL
Match: tr|A0A2P6R221|A0A2P6R221_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0436431 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.1e-17 Identity = 57/149 (38.26%), Postives = 82/149 (55.03%), Query Frame = 0
BLAST of CsaV3_2G010890 vs. TrEMBL
Match: tr|A0A2I4G194|A0A2I4G194_9ROSI (uncharacterized protein LOC109003818 OS=Juglans regia OX=51240 GN=LOC109003818 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 3.6e-17 Identity = 62/156 (39.74%), Postives = 86/156 (55.13%), Query Frame = 0
BLAST of CsaV3_2G010890 vs. TrEMBL
Match: tr|A0A1S3UNW8|A0A1S3UNW8_VIGRR (uncharacterized protein LOC106767343 OS=Vigna radiata var. radiata OX=3916 GN=LOC106767343 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 3.6e-17 Identity = 55/143 (38.46%), Postives = 76/143 (53.15%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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