CsaV3_2G010650 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_2G010650
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2 : 7810835 .. 7812615 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCCCATATTTAATTGTCCGAGTTTGCAAAACCTCACCCTTGGCACAAAAATGGGTTGATCTCCACATATCAACCCCCCCTTCCCGAGGGGATTTGGCCCTATATGCAGACAGATCCATTTCCATAGCCAATGAGTTCTTTTATTTTAGATTGAACGAACTTGGTCAAAGTGTAGATAGTTGTCATCTTCTGGCGTTGGGGTTTGACAAGGCAAAGAATCAGGGAGAAAGCTTGAAGAAGGTTAGGAGTATGGGGATGAGTGTATATATTGACATGATCGGAAGCTGACTACAAATTATTGTTCATTGATCTCAAACCTGAATTTCATTAAGACTCTATTAGTAAAGTCTCAATATTGGGTTTTTTTTTTTTTTTTTTTGTCATTTGATATAATTATAAGCAATTTCATCCGTTTGTTTATTTATTTTTCTTTAATTTTGTTTGTTCAGGGGACAGACAGATCATTGGTGTATTAAGTGTATTAAGAGATATTGATAGTAAAAGATTTAGAGGTGGGGAGATTATTGGATGAAAAATTTGTAAAAACAAAAACAAATTATTATTTTATTTTCAAATGCATTTCCAAGTTGATTAACTTTGAGTGTGGAAGTCCCTTCTTATACTCATTGATTCATTTAATAAAAAAGGAGATAGAAAAACGGTGATATGTCCATATCTCCACGAAACGTGTTAAAGAGTACTTGATAATATATTTTTTATTATCTCTCTTTTTAAATTGTAAGTTTCTTTTTTTTTGCAACTAATTTAAAACATGAAAGTTGAAAGTGGTAAAAACGATTTTATATCTAGTTTAAACGATCTTGTACCTTTGTACCAAATCTAAACAATCTTGTAACCTTATACTTAGTCTAAACGATCTTGTACCTAGTCTACACAATCTTACTACACGATCTTATACCCTTGTACTAGTCTAAGCGATCTTGTATCTTTGTATCTCGTCTAAACAATCTCGTACCTAGTTTAAATGATCTTGTACCCCTTTTGAACGATTTTATACCAAACCTAAACGATTTATTCATGATAGTGATCTATGTGTGTCTACCTCAAATAGACAAGTGATCGTTTAAATATTGTTACACGATCGTTTAGATCCTGTAGCAATATTGTTTAGATCTTGTATCAAGAAAAAAAAATGAAAGATGAAGAATAAGAAATAAATTTTGGAAGAGAAAATGAAGAAATTGAAAACAATAAGAAATGAGAATATGAGAAGAAGAAGTAATAATATGAAAAGGTGAATAATAAATCGTAAAGAAGAAGAAAAATAAATGAAGTGAAGAATGATCTGGACGACGTTAAAAAAAGATCTAAAATTTATGAAAAAAAGAATGAGTTTTCTTAAACAAATACACAATTGTGTAGGGGAATTAATGAAGTTAAAAATTGGTAACGTCAGGCGTAGATATTGAGTTGACGCGGAAAGAGAAAGGAATTTACGAAAATAGGGTGGAGGTGGTTGGATTGGATTGGATTGGACGCAAAGACGTGGAAGTTTCGAGCGAAGAAAACTCCACTCTGCTCCTCCATTTTCCCCATCTCTTTTTTGTGCATTCTTCTTCTACATTGACCACCACCCCCATCTCTTCCATTTTCCCATTTCCCATCTCTTCTACTCTCAAACGCGCTTTCTCTTTCTCTTCTTCCAGGTTTGTTTTCCCCTCTCTCTCCCCCCCCACCCTTCAATTTCCATCTTCTCAAATCTCTATCATCCTCTAATTCACCCGCTCCCTCTTTCTAGGGTTTCTTTCTTTTCTTGA

mRNA sequence

ATGTTCCCATATTTAATTGTCCGAGTTTGCAAAACCTCACCCTTGGCACAAAAATGGGTTGATCTCCACATATCAACCCCCCCTTCCCGAGGGGATTTGGCCCTATATGCAGACAGATCCATTTCCATAGCCAATGAGTTCTTTTATTTTAGATTGAACGAACTTGGTCAAAGTGTAGATAGTTGTCATCTTCTGGCGTTGGGGTTTGACAAGGCAAAGAATCAGGGAGAAAGCTTGAAGAAGGTTAGGAGCGTAGATATTGAGTTGACGCGGAAAGAGAAAGGAATTTACGAAAATAGGGTGGAGGTGGTTGGATTGGATTGGATTGGACGCAAAGACGTGGAAGTTTCGAGCGAAGAAAACTCCACTCTGCTCCTCCATTTTCCCCATCTCTTTTTTGTGCATTCTTCTTCTACATTGACCACCACCCCCATCTCTTCCATTTTCCCATTTCCCATCTCTTCTACTCTCAAACGCGCTTTCTCTTTCTCTTCTTCCAGGGTTTCTTTCTTTTCTTGA

Coding sequence (CDS)

ATGTTCCCATATTTAATTGTCCGAGTTTGCAAAACCTCACCCTTGGCACAAAAATGGGTTGATCTCCACATATCAACCCCCCCTTCCCGAGGGGATTTGGCCCTATATGCAGACAGATCCATTTCCATAGCCAATGAGTTCTTTTATTTTAGATTGAACGAACTTGGTCAAAGTGTAGATAGTTGTCATCTTCTGGCGTTGGGGTTTGACAAGGCAAAGAATCAGGGAGAAAGCTTGAAGAAGGTTAGGAGCGTAGATATTGAGTTGACGCGGAAAGAGAAAGGAATTTACGAAAATAGGGTGGAGGTGGTTGGATTGGATTGGATTGGACGCAAAGACGTGGAAGTTTCGAGCGAAGAAAACTCCACTCTGCTCCTCCATTTTCCCCATCTCTTTTTTGTGCATTCTTCTTCTACATTGACCACCACCCCCATCTCTTCCATTTTCCCATTTCCCATCTCTTCTACTCTCAAACGCGCTTTCTCTTTCTCTTCTTCCAGGGTTTCTTTCTTTTCTTGA

Protein sequence

MFPYLIVRVCKTSPLAQKWVDLHISTPPSRGDLALYADRSISIANEFFYFRLNELGQSVDSCHLLALGFDKAKNQGESLKKVRSVDIELTRKEKGIYENRVEVVGLDWIGRKDVEVSSEENSTLLLHFPHLFFVHSSSTLTTTPISSIFPFPISSTLKRAFSFSSSRVSFFS
Homology
[Close]
BLAST of CsaV3_2G010650 vs. NCBI nr
Match: KGN61377.1 (hypothetical protein Csa_2G100590 [Cucumis sativus])

HSP 1 Score: 338.6 bits (867), Expect = 1.3e-89
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 

Query: 1   MFPYLIVRVCKTSPLAQKWVDLHISTPPSRGDLALYADRSISIANEFFYFRLNELGQSVD 60
           MFPYLIVRVCKTSPLAQKWVDLHISTPPSRGDLALYADRSISIANEFFYFRLNELGQSVD
Sbjct: 1   MFPYLIVRVCKTSPLAQKWVDLHISTPPSRGDLALYADRSISIANEFFYFRLNELGQSVD 60

Query: 61  SCHLLALGFDKAKNQGESLKKVRSVDIELTRKEKGIYENRVEVVGLDWIGRKDVEVSSEE 120
           SCHLLALGFDKAKNQGESLKKVRSVDIELTRKEKGIYENRVEVVGLDWIGRKDVEVSSEE
Sbjct: 61  SCHLLALGFDKAKNQGESLKKVRSVDIELTRKEKGIYENRVEVVGLDWIGRKDVEVSSEE 120

Query: 121 NSTLLLHFPHLFFVHSSSTLTTTPISSIFPFPISSTLKRAFSFSSSRVSFFS 173
           NSTLLLHFPHLFFVHSSSTLTTTPISSIFPFPISSTLKRAFSFSSSRVSFFS
Sbjct: 121 NSTLLLHFPHLFFVHSSSTLTTTPISSIFPFPISSTLKRAFSFSSSRVSFFS 172

[Close]
BLAST of CsaV3_2G010650 vs. TrEMBL
Match: tr|A0A0A0LKU7|A0A0A0LKU7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G100590 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 8.4e-90
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 

Query: 1   MFPYLIVRVCKTSPLAQKWVDLHISTPPSRGDLALYADRSISIANEFFYFRLNELGQSVD 60
           MFPYLIVRVCKTSPLAQKWVDLHISTPPSRGDLALYADRSISIANEFFYFRLNELGQSVD
Sbjct: 1   MFPYLIVRVCKTSPLAQKWVDLHISTPPSRGDLALYADRSISIANEFFYFRLNELGQSVD 60

Query: 61  SCHLLALGFDKAKNQGESLKKVRSVDIELTRKEKGIYENRVEVVGLDWIGRKDVEVSSEE 120
           SCHLLALGFDKAKNQGESLKKVRSVDIELTRKEKGIYENRVEVVGLDWIGRKDVEVSSEE
Sbjct: 61  SCHLLALGFDKAKNQGESLKKVRSVDIELTRKEKGIYENRVEVVGLDWIGRKDVEVSSEE 120

Query: 121 NSTLLLHFPHLFFVHSSSTLTTTPISSIFPFPISSTLKRAFSFSSSRVSFFS 173
           NSTLLLHFPHLFFVHSSSTLTTTPISSIFPFPISSTLKRAFSFSSSRVSFFS
Sbjct: 121 NSTLLLHFPHLFFVHSSSTLTTTPISSIFPFPISSTLKRAFSFSSSRVSFFS 172

The following BLAST results are available for this feature:
BLAST of CsaV3_2G010650 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN61377.11.3e-89100.00hypothetical protein Csa_2G100590 [Cucumis sativus][more]
BLAST of CsaV3_2G010650 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G010650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_2G010650 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LKU7|A0A0A0LKU7_CUCSA8.4e-90100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G100590 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G010650.1CsaV3_2G010650.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_2G010650Silver-seed gourdcarcucB0737
CsaV3_2G010650Silver-seed gourdcarcucB1115
CsaV3_2G010650Cucumber (Gy14) v2cgybcucB064
CsaV3_2G010650Cucumber (Gy14) v1cgycucB304
CsaV3_2G010650Cucurbita maxima (Rimu)cmacucB0532
CsaV3_2G010650Cucurbita maxima (Rimu)cmacucB0936
CsaV3_2G010650Cucurbita moschata (Rifu)cmocucB0518
CsaV3_2G010650Cucurbita moschata (Rifu)cmocucB0920
CsaV3_2G010650Cucurbita pepo (Zucchini)cpecucB0118
CsaV3_2G010650Cucurbita pepo (Zucchini)cpecucB0672
CsaV3_2G010650Wild cucumber (PI 183967)cpicucB080
CsaV3_2G010650Bottle gourd (USVL1VR-Ls)cuclsiB108
CsaV3_2G010650Melon (DHL92) v3.5.1cucmeB144
CsaV3_2G010650Melon (DHL92) v3.6.1cucmedB137
CsaV3_2G010650Watermelon (Charleston Gray)cucwcgB115
CsaV3_2G010650Watermelon (97103) v1cucwmB169
CsaV3_2G010650Watermelon (97103) v1cucwmB177
CsaV3_2G010650Watermelon (97103) v2cucwmbB114
CsaV3_2G010650Watermelon (97103) v2cucwmbB110
CsaV3_2G010650Wax gourdcucwgoB147