CsaV3_2G006400 (gene) Cucumber (Chinese Long) v3

NameCsaV3_2G006400
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr2 : 3014909 .. 3015225 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGATGATGAGAAAATGTTCGGGAATGAAAATAGCATTAAAGAAAGCAAAAAATAGAGAGAAAAAAAAGTGTAGAATAACGATTGATATTTTGTGCTAAATATATTTAAAATAGCGTCCAGACGCCACGACACTCAAGCTTATGCACACGCATCACATCTGCCTCAAATGTTCAGAACGTCGCAGCGCTTGGCCAATTATGCAAGTTAGGACCCTTCTGCCTTACAGCACCGCTCGAGTCGTCGTGGGGCAAATACAAGGTGGAAGCCTTTTTTACTTCTTTAGCTCATACAAACACCTCCGTTTGCTCTTGA

mRNA sequence

ATGTCGGATGATGAGAAAATCGTCCAGACGCCACGACACTCAAGCTTATGCACACGCATCACATCTGCCTCAAATGTTCAGAACGTCGCAGCGCTTGGCCAATTATGCAAGTTAGGACCCTTCTGCCTTACAGCACCGCTCGAGTCGTCGTGGGGCAAATACAAGGTGGAAGCCTTTTTTACTTCTTTAGCTCATACAAACACCTCCGTTTGCTCTTGA

Coding sequence (CDS)

ATGTCGGATGATGAGAAAATCGTCCAGACGCCACGACACTCAAGCTTATGCACACGCATCACATCTGCCTCAAATGTTCAGAACGTCGCAGCGCTTGGCCAATTATGCAAGTTAGGACCCTTCTGCCTTACAGCACCGCTCGAGTCGTCGTGGGGCAAATACAAGGTGGAAGCCTTTTTTACTTCTTTAGCTCATACAAACACCTCCGTTTGCTCTTGA

Protein sequence

MSDDEKIVQTPRHSSLCTRITSASNVQNVAALGQLCKLGPFCLTAPLESSWGKYKVEAFFTSLAHTNTSVCS
BLAST of CsaV3_2G006400 vs. NCBI nr
Match: KGN60926.1 (hypothetical protein Csa_2G023930 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 3.5e-33
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0

Query: 1  MSDDEKIVQTPRHSSLCTRITSASNVQNVAALGQLCKLGPFCLTAPLESSWGKYKVEAFF 60
          MSDDEKIVQTPRHSSLCTRITSASNVQNVAALGQLCKLGPFCLTAPLESSWGKYKVEAFF
Sbjct: 1  MSDDEKIVQTPRHSSLCTRITSASNVQNVAALGQLCKLGPFCLTAPLESSWGKYKVEAFF 60

Query: 61 TSLAHTNTSVCS 73
          TSLAHTNTSVCS
Sbjct: 61 TSLAHTNTSVCS 72

BLAST of CsaV3_2G006400 vs. TrEMBL
Match: tr|A0A0A0LLT0|A0A0A0LLT0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G023930 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.3e-33
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0

Query: 1  MSDDEKIVQTPRHSSLCTRITSASNVQNVAALGQLCKLGPFCLTAPLESSWGKYKVEAFF 60
          MSDDEKIVQTPRHSSLCTRITSASNVQNVAALGQLCKLGPFCLTAPLESSWGKYKVEAFF
Sbjct: 1  MSDDEKIVQTPRHSSLCTRITSASNVQNVAALGQLCKLGPFCLTAPLESSWGKYKVEAFF 60

Query: 61 TSLAHTNTSVCS 73
          TSLAHTNTSVCS
Sbjct: 61 TSLAHTNTSVCS 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN60926.13.5e-33100.00hypothetical protein Csa_2G023930 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LLT0|A0A0A0LLT0_CUCSA2.3e-33100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G023930 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G006400.1CsaV3_2G006400.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None