CsaV3_2G005290 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAATATCGGTGATGATGAGCACAGTCGACGGAGGAAGGACACCGATAAAAAGAATCGAGAACGAAAAGTACAAATGGAGGCAATAGAAATTGCAGAAAAGGTGAGTGATCGAAACAAGTTCAAAATAGAAATTGAAGAGAAAGAGAGCGATCGAAACAAGTTCGAGTCGCAAGTGTTTGGCGTAAGTAGTTCTGTTGGAAGTGCTTTAGATGGTTATCAATCATTGGGGGAAGGCGATTCATTCAAGAATGGGTTGGAATTGAAGCAGAGGTTGTTATCTCGTTTCCGTTTAGCGATAGGAGAAGCTGTCAGCGGATGCTTCTTAGTAATCAAACAATTAGGAAATCATCGTGGAAGGTTAGGCGATAATTATTGGAGGGATCCGAAACAAAGACTCGAGTAAAAAAGAAATTGTTGTTCAAGGAAACAAAAAATGGTTGGTTGTGATGGAGAATGAAGTCGTTGGAAGTTGTTTGGTTTAATTTCAATGGGAAAAGAAGACAGCTACGACAGTCGTTTGGATGTGAAGGAAAAAGAAAACGTCGACAAGTGGTGGTTTACTGTGGTCCGAGGAAGTGATTGGGAATATGAGTGAATCGTGTGAGGAAGAAGAAGTTGCACATGTCAGGATGCCAATTACGTAGTAGAAAGTGATAGGAAAGAAGATTAGGACAAGATAAATAAACCCTAAAATCTTAGACTTTTCCTTTTCAAGTGGGCTTCAACTTATTATAGATAAAATAGTGGAGGTCCATTATTGTATAGATGAAGTGGATGGTGATTTTCGAGAATGGGAGAGACGAAAAACGTGCCTAAAGGTGGGGAAAGGAAGATTGATCAGTGGGTTGGTTTATGGGTTAGTGCAAGAAGATTATTTTGTGCTATGGGCTGAAGTAAATGAGTCTTATCAGAGCCAAGAAGTTTTTTGAAGCTAAAAGAAAAAATTTGTTCTCAAATTTCTCAAACTTGAAGAGCAGATCATTGGGAATGGATGGTAACTAAAAAAAGATAGTCAATTTTGTGATCATATTTGTAAGCACACCTTGAAAACAATGTGTTTTTGAAGACTAGGGGAGTGATATAAGGATATAATTAGATTTGTTGGACAAGTAGTTGGTTATAAATAAGAAGTTGGGGAGGGAAGAAAGGGAGAAGATTTTTGTGAAGGTAATATAGGCTGCAACATTCCTTAAAAGAAAGGCAAAGGCGTGAGGGTTAGGGTTCTATTTAAGTGTTCTCTTGAGTTTCTTTTTACATGTTTGTTCTTTTATATTGTAATTTCTACTGGACACTATCAGAGAGAGAGAGTTGTTTCCATTCCATCACAATATAACATAGACTATATAAAAAATGTCACTGTGAAAGAAGCTTGAAATGAAACTCTTCAATATATCACTGTCAATATTCTCTTCTGGTATTACAAAAAAGCTTGAAATTAAAAGAAGTCAATTTTTATATATATAAAAGACGAAAGTATGTCGATTGTTTGAAGACTATACACAAACCACTCTAAACTCTTTTCCTATAACATTTACCCATTTCTTAGAATCTTCCTTATGCTAATTTTCCAAGAATTAACTAACCTATAAATACACACTTGTTCCCCAGTAACAAAGTAGAAATTAAATAATTGCTATGGTTTTATTTTTCTCTATTGCTATCATTCAAGCCTACATGTAATTGATTAAAGGAAATTATTGTATGAAAAAGTCAAATCAGATCATATGTTGTCTTCAAGTTTATATTTAAGAAAGAAAAAAAAGAAAAAAGAACGACCCTCTCTTCTTTATCCCTAGCTACTTTTGTCTTCTACTTTTGTCCTATTATTTAGAGCCAAAATCCACTTATTGTTATTTGTTTTTGGATGACGAATTTGACAGGCAATGCTAATTCGACATCATGATCAGTAGAATAATATCAAGTATGATGTTATTTAAATTTTAAAAATAAATATTTGTGGCATCAATCTAATTTTAATTTATGAACAATAAAGTTGACAATTGAAGATTTGTTAGGGTGTCACATCAAAAGAAAAAATAGATAAGAAAAAAAGGCTGAATATTGACTTCTAAATTTAACCACTGACTTCAAACTTAGATGGCCTCAAATTAATTATAAATTTAACTTTCTCTTCTTGCATGCAGTATTCTTTTTCTCATTCAGTTTTGGTTTCCATATTTCAAATTCAAACATCTCAAAAGCATTGCTTTGCTACTGCAACAGATTATTATTTTCTTTTTCTTTGCATTTTTTGTTTTTTGTGAGAGGATGGGTTCTTCTGTTGTTGGAGATGAATCATTTTCTTCTTCTCCCAATTTCAATTACGATTATGATGTGTTTTTTAGTTTCAGAGGAGAAGATACTCGCTCCAATTTTATCAGTCATCTTCATATGGCCTTGCGTCTAAAGGAAGTCAACGTTTTCATAGACGACAAACTCAAAAGGGGTGAACAAATTTATGAGTCTCTTCTCAAATTTATAGAGCGATCTAGACTTTCCCTCGTTATTTTCTCTAAAGATTATGCATCTTCAACTTGGTGTTTGGATGAACTGGTGAAAATAATTGAGTGTAAGAAATCCAAAGGACAAGCAGTTTGGCCAGTGTTCTACAAGGTGGATCCATCCGAGGTTCGAAAACAAACCGGTGGGTTTGGGGAAGCATTGGCCAAACATGAAGCTAATAAGTTATTGACCAACAAGATTCAACCATGGAGGGAAGCTTTGACTTTTGCTGCTGGTTTGTCTGGTTGGGATCTAGCAAATAGGTATTTTTTTTTATTTTTTTTTAATCTTTGA ATGACAAATATCGGTGATGATGAGCACAGTCGACGGAGGAAGGACACCGATAAAAAGAATCGAGAACGAAAAGTACAAATGGAGGCAATAGAAATTGCAGAAAAGGTGAGTGATCGAAACAAGTTCAAAATAGAAATTGAAGAGAAAGAGAGCGATCGAAACAAGTTCGAGTCGCAAGTGTTTGGCGTAAGTAGTTCTGTTGGAAGTGCTTTAGATGGTTATCAATCATTGGGGGAAGGCGATTCATTCAAGAATGGGTTGGAATTGAAGCAGAGTATTCTTTTTCTCATTCAGTTTTGGTTTCCATATTTCAAATTCAAACATCTCAAAAGCATTGCTTTGCTACTGCAACAGATTATTATTTTCTTTTTCTTTGCATTTTTTGTTTTTTGTGAGAGGATGGGTTCTTCTGTTGTTGGAGATGAATCATTTTCTTCTTCTCCCAATTTCAATTACGATTATGATGTGTTTTTTAGTTTCAGAGGAGAAGATACTCGCTCCAATTTTATCAGTCATCTTCATATGGCCTTGCGTCTAAAGGAAGTCAACGTTTTCATAGACGACAAACTCAAAAGGGGTGAACAAATTTATGAGTCTCTTCTCAAATTTATAGAGCGATCTAGACTTTCCCTCGTTATTTTCTCTAAAGATTATGCATCTTCAACTTGGTGTTTGGATGAACTGGTGAAAATAATTGAGTGTAAGAAATCCAAAGGACAAGCAGTTTGGCCAGTGTTCTACAAGGTGGATCCATCCGAGGTTCGAAAACAAACCGGTGGGTTTGGGGAAGCATTGGCCAAACATGAAGCTAATAAGTTATTGACCAACAAGATTCAACCATGGAGGGAAGCTTTGACTTTTGCTGCTGGTTTGTCTGGTTGGGATCTAGCAAATAGGTATTTTTTTTTATTTTTTTTTAATCTTTGA ATGACAAATATCGGTGATGATGAGCACAGTCGACGGAGGAAGGACACCGATAAAAAGAATCGAGAACGAAAAGTACAAATGGAGGCAATAGAAATTGCAGAAAAGGTGAGTGATCGAAACAAGTTCAAAATAGAAATTGAAGAGAAAGAGAGCGATCGAAACAAGTTCGAGTCGCAAGTGTTTGGCGTAAGTAGTTCTGTTGGAAGTGCTTTAGATGGTTATCAATCATTGGGGGAAGGCGATTCATTCAAGAATGGGTTGGAATTGAAGCAGAGTATTCTTTTTCTCATTCAGTTTTGGTTTCCATATTTCAAATTCAAACATCTCAAAAGCATTGCTTTGCTACTGCAACAGATTATTATTTTCTTTTTCTTTGCATTTTTTGTTTTTTGTGAGAGGATGGGTTCTTCTGTTGTTGGAGATGAATCATTTTCTTCTTCTCCCAATTTCAATTACGATTATGATGTGTTTTTTAGTTTCAGAGGAGAAGATACTCGCTCCAATTTTATCAGTCATCTTCATATGGCCTTGCGTCTAAAGGAAGTCAACGTTTTCATAGACGACAAACTCAAAAGGGGTGAACAAATTTATGAGTCTCTTCTCAAATTTATAGAGCGATCTAGACTTTCCCTCGTTATTTTCTCTAAAGATTATGCATCTTCAACTTGGTGTTTGGATGAACTGGTGAAAATAATTGAGTGTAAGAAATCCAAAGGACAAGCAGTTTGGCCAGTGTTCTACAAGGTGGATCCATCCGAGGTTCGAAAACAAACCGGTGGGTTTGGGGAAGCATTGGCCAAACATGAAGCTAATAAGTTATTGACCAACAAGATTCAACCATGGAGGGAAGCTTTGACTTTTGCTGCTGGTTTGTCTGGTTGGGATCTAGCAAATAGGTATTTTTTTTTATTTTTTTTTAATCTTTGA MTNIGDDEHSRRRKDTDKKNRERKVQMEAIEIAEKVSDRNKFKIEIEEKESDRNKFESQVFGVSSSVGSALDGYQSLGEGDSFKNGLELKQSILFLIQFWFPYFKFKHLKSIALLLQQIIIFFFFAFFVFCERMGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRGEQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSEVRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLANRYFFLFFFNL
BLAST of CsaV3_2G005290 vs. NCBI nr
Match: KGN60910.1 (hypothetical protein Csa_2G022790 [Cucumis sativus]) HSP 1 Score: 336.3 bits (861), Expect = 1.1e-88 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. NCBI nr
Match: ADU33177.1 (putative TIR-NBS class resistance protein [Cucumis sativus]) HSP 1 Score: 336.3 bits (861), Expect = 1.1e-88 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. NCBI nr
Match: XP_008454579.1 (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo]) HSP 1 Score: 298.5 bits (763), Expect = 2.6e-77 Identity = 152/165 (92.12%), Postives = 153/165 (92.73%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. NCBI nr
Match: XP_008455151.1 (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo]) HSP 1 Score: 269.6 bits (688), Expect = 1.3e-68 Identity = 141/173 (81.50%), Postives = 146/173 (84.39%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. NCBI nr
Match: XP_011650108.1 (PREDICTED: TMV resistance protein N-like [Cucumis sativus]) HSP 1 Score: 253.4 bits (646), Expect = 9.6e-64 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. TAIR10
Match: AT5G36930.2 (Disease resistance protein (TIR-NBS-LRR class) family) HSP 1 Score: 148.3 bits (373), Expect = 7.9e-36 Identity = 74/150 (49.33%), Postives = 104/150 (69.33%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. TAIR10
Match: AT4G16990.2 (disease resistance protein (TIR-NBS class), putative) HSP 1 Score: 144.1 bits (362), Expect = 1.5e-34 Identity = 76/145 (52.41%), Postives = 94/145 (64.83%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. TAIR10
Match: AT1G65850.2 (Disease resistance protein (TIR-NBS-LRR class) family) HSP 1 Score: 141.0 bits (354), Expect = 1.3e-33 Identity = 72/167 (43.11%), Postives = 108/167 (64.67%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. TAIR10
Match: AT4G11170.1 (Disease resistance protein (TIR-NBS-LRR class) family) HSP 1 Score: 141.0 bits (354), Expect = 1.3e-33 Identity = 74/156 (47.44%), Postives = 101/156 (64.74%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. TAIR10
Match: AT5G46470.1 (disease resistance protein (TIR-NBS-LRR class) family) HSP 1 Score: 139.8 bits (351), Expect = 2.8e-33 Identity = 72/154 (46.75%), Postives = 102/154 (66.23%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. Swiss-Prot
Match: sp|Q9FT77|RLM3_ARATH (Disease resistance protein RLM3 OS=Arabidopsis thaliana OX=3702 GN=RLM3 PE=2 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.7e-33 Identity = 76/145 (52.41%), Postives = 94/145 (64.83%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. Swiss-Prot
Match: sp|O82500|Y4117_ARATH (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN=At4g11170 PE=2 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.3e-32 Identity = 74/156 (47.44%), Postives = 101/156 (64.74%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. Swiss-Prot
Match: sp|F4KHH8|RPS6C_ARATH (Disease resistance protein RPS6 OS=Arabidopsis thaliana OX=3702 GN=RPS6 PE=1 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.1e-32 Identity = 72/154 (46.75%), Postives = 102/154 (66.23%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. Swiss-Prot
Match: sp|P0DKH6|RPS6R_ARATH (Disease resistance protein RPS6 OS=Arabidopsis thaliana OX=3702 GN=RPS6 PE=1 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 5.1e-32 Identity = 72/154 (46.75%), Postives = 102/154 (66.23%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. Swiss-Prot
Match: sp|F4JNB7|RPP5_ARATH (Disease resistance protein RPP5 OS=Arabidopsis thaliana OX=3702 GN=RPP5 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 6.6e-32 Identity = 78/157 (49.68%), Postives = 99/157 (63.06%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. TrEMBL
Match: tr|A0A0A0LFS4|A0A0A0LFS4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G022790 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 7.4e-89 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. TrEMBL
Match: tr|E7CHD2|E7CHD2_CUCSA (Putative TIR-NBS class resistance protein OS=Cucumis sativus OX=3659 PE=4 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 7.4e-89 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. TrEMBL
Match: tr|A0A1S3BZQ4|A0A1S3BZQ4_CUCME (TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494963 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.7e-77 Identity = 152/165 (92.12%), Postives = 153/165 (92.73%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. TrEMBL
Match: tr|A0A1S3C088|A0A1S3C088_CUCME (TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495388 PE=4 SV=1) HSP 1 Score: 269.6 bits (688), Expect = 8.6e-69 Identity = 141/173 (81.50%), Postives = 146/173 (84.39%), Query Frame = 0
BLAST of CsaV3_2G005290 vs. TrEMBL
Match: tr|A0A0A0KNK0|A0A0A0KNK0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G494390 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 3.5e-62 Identity = 123/168 (73.21%), Postives = 140/168 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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