CsaV3_2G005290 (gene) Cucumber (Chinese Long) v3

NameCsaV3_2G005290
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionTMV resistance protein N-like isoform X1
Locationchr2 : 2898600 .. 2901400 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAATATCGGTGATGATGAGCACAGTCGACGGAGGAAGGACACCGATAAAAAGAATCGAGAACGAAAAGTACAAATGGAGGCAATAGAAATTGCAGAAAAGGTGAGTGATCGAAACAAGTTCAAAATAGAAATTGAAGAGAAAGAGAGCGATCGAAACAAGTTCGAGTCGCAAGTGTTTGGCGTAAGTAGTTCTGTTGGAAGTGCTTTAGATGGTTATCAATCATTGGGGGAAGGCGATTCATTCAAGAATGGGTTGGAATTGAAGCAGAGGTTGTTATCTCGTTTCCGTTTAGCGATAGGAGAAGCTGTCAGCGGATGCTTCTTAGTAATCAAACAATTAGGAAATCATCGTGGAAGGTTAGGCGATAATTATTGGAGGGATCCGAAACAAAGACTCGAGTAAAAAAGAAATTGTTGTTCAAGGAAACAAAAAATGGTTGGTTGTGATGGAGAATGAAGTCGTTGGAAGTTGTTTGGTTTAATTTCAATGGGAAAAGAAGACAGCTACGACAGTCGTTTGGATGTGAAGGAAAAAGAAAACGTCGACAAGTGGTGGTTTACTGTGGTCCGAGGAAGTGATTGGGAATATGAGTGAATCGTGTGAGGAAGAAGAAGTTGCACATGTCAGGATGCCAATTACGTAGTAGAAAGTGATAGGAAAGAAGATTAGGACAAGATAAATAAACCCTAAAATCTTAGACTTTTCCTTTTCAAGTGGGCTTCAACTTATTATAGATAAAATAGTGGAGGTCCATTATTGTATAGATGAAGTGGATGGTGATTTTCGAGAATGGGAGAGACGAAAAACGTGCCTAAAGGTGGGGAAAGGAAGATTGATCAGTGGGTTGGTTTATGGGTTAGTGCAAGAAGATTATTTTGTGCTATGGGCTGAAGTAAATGAGTCTTATCAGAGCCAAGAAGTTTTTTGAAGCTAAAAGAAAAAATTTGTTCTCAAATTTCTCAAACTTGAAGAGCAGATCATTGGGAATGGATGGTAACTAAAAAAAGATAGTCAATTTTGTGATCATATTTGTAAGCACACCTTGAAAACAATGTGTTTTTGAAGACTAGGGGAGTGATATAAGGATATAATTAGATTTGTTGGACAAGTAGTTGGTTATAAATAAGAAGTTGGGGAGGGAAGAAAGGGAGAAGATTTTTGTGAAGGTAATATAGGCTGCAACATTCCTTAAAAGAAAGGCAAAGGCGTGAGGGTTAGGGTTCTATTTAAGTGTTCTCTTGAGTTTCTTTTTACATGTTTGTTCTTTTATATTGTAATTTCTACTGGACACTATCAGAGAGAGAGAGTTGTTTCCATTCCATCACAATATAACATAGACTATATAAAAAATGTCACTGTGAAAGAAGCTTGAAATGAAACTCTTCAATATATCACTGTCAATATTCTCTTCTGGTATTACAAAAAAGCTTGAAATTAAAAGAAGTCAATTTTTATATATATAAAAGACGAAAGTATGTCGATTGTTTGAAGACTATACACAAACCACTCTAAACTCTTTTCCTATAACATTTACCCATTTCTTAGAATCTTCCTTATGCTAATTTTCCAAGAATTAACTAACCTATAAATACACACTTGTTCCCCAGTAACAAAGTAGAAATTAAATAATTGCTATGGTTTTATTTTTCTCTATTGCTATCATTCAAGCCTACATGTAATTGATTAAAGGAAATTATTGTATGAAAAAGTCAAATCAGATCATATGTTGTCTTCAAGTTTATATTTAAGAAAGAAAAAAAAGAAAAAAGAACGACCCTCTCTTCTTTATCCCTAGCTACTTTTGTCTTCTACTTTTGTCCTATTATTTAGAGCCAAAATCCACTTATTGTTATTTGTTTTTGGATGACGAATTTGACAGGCAATGCTAATTCGACATCATGATCAGTAGAATAATATCAAGTATGATGTTATTTAAATTTTAAAAATAAATATTTGTGGCATCAATCTAATTTTAATTTATGAACAATAAAGTTGACAATTGAAGATTTGTTAGGGTGTCACATCAAAAGAAAAAATAGATAAGAAAAAAAGGCTGAATATTGACTTCTAAATTTAACCACTGACTTCAAACTTAGATGGCCTCAAATTAATTATAAATTTAACTTTCTCTTCTTGCATGCAGTATTCTTTTTCTCATTCAGTTTTGGTTTCCATATTTCAAATTCAAACATCTCAAAAGCATTGCTTTGCTACTGCAACAGATTATTATTTTCTTTTTCTTTGCATTTTTTGTTTTTTGTGAGAGGATGGGTTCTTCTGTTGTTGGAGATGAATCATTTTCTTCTTCTCCCAATTTCAATTACGATTATGATGTGTTTTTTAGTTTCAGAGGAGAAGATACTCGCTCCAATTTTATCAGTCATCTTCATATGGCCTTGCGTCTAAAGGAAGTCAACGTTTTCATAGACGACAAACTCAAAAGGGGTGAACAAATTTATGAGTCTCTTCTCAAATTTATAGAGCGATCTAGACTTTCCCTCGTTATTTTCTCTAAAGATTATGCATCTTCAACTTGGTGTTTGGATGAACTGGTGAAAATAATTGAGTGTAAGAAATCCAAAGGACAAGCAGTTTGGCCAGTGTTCTACAAGGTGGATCCATCCGAGGTTCGAAAACAAACCGGTGGGTTTGGGGAAGCATTGGCCAAACATGAAGCTAATAAGTTATTGACCAACAAGATTCAACCATGGAGGGAAGCTTTGACTTTTGCTGCTGGTTTGTCTGGTTGGGATCTAGCAAATAGGTATTTTTTTTTATTTTTTTTTAATCTTTGA

mRNA sequence

ATGACAAATATCGGTGATGATGAGCACAGTCGACGGAGGAAGGACACCGATAAAAAGAATCGAGAACGAAAAGTACAAATGGAGGCAATAGAAATTGCAGAAAAGGTGAGTGATCGAAACAAGTTCAAAATAGAAATTGAAGAGAAAGAGAGCGATCGAAACAAGTTCGAGTCGCAAGTGTTTGGCGTAAGTAGTTCTGTTGGAAGTGCTTTAGATGGTTATCAATCATTGGGGGAAGGCGATTCATTCAAGAATGGGTTGGAATTGAAGCAGAGTATTCTTTTTCTCATTCAGTTTTGGTTTCCATATTTCAAATTCAAACATCTCAAAAGCATTGCTTTGCTACTGCAACAGATTATTATTTTCTTTTTCTTTGCATTTTTTGTTTTTTGTGAGAGGATGGGTTCTTCTGTTGTTGGAGATGAATCATTTTCTTCTTCTCCCAATTTCAATTACGATTATGATGTGTTTTTTAGTTTCAGAGGAGAAGATACTCGCTCCAATTTTATCAGTCATCTTCATATGGCCTTGCGTCTAAAGGAAGTCAACGTTTTCATAGACGACAAACTCAAAAGGGGTGAACAAATTTATGAGTCTCTTCTCAAATTTATAGAGCGATCTAGACTTTCCCTCGTTATTTTCTCTAAAGATTATGCATCTTCAACTTGGTGTTTGGATGAACTGGTGAAAATAATTGAGTGTAAGAAATCCAAAGGACAAGCAGTTTGGCCAGTGTTCTACAAGGTGGATCCATCCGAGGTTCGAAAACAAACCGGTGGGTTTGGGGAAGCATTGGCCAAACATGAAGCTAATAAGTTATTGACCAACAAGATTCAACCATGGAGGGAAGCTTTGACTTTTGCTGCTGGTTTGTCTGGTTGGGATCTAGCAAATAGGTATTTTTTTTTATTTTTTTTTAATCTTTGA

Coding sequence (CDS)

ATGACAAATATCGGTGATGATGAGCACAGTCGACGGAGGAAGGACACCGATAAAAAGAATCGAGAACGAAAAGTACAAATGGAGGCAATAGAAATTGCAGAAAAGGTGAGTGATCGAAACAAGTTCAAAATAGAAATTGAAGAGAAAGAGAGCGATCGAAACAAGTTCGAGTCGCAAGTGTTTGGCGTAAGTAGTTCTGTTGGAAGTGCTTTAGATGGTTATCAATCATTGGGGGAAGGCGATTCATTCAAGAATGGGTTGGAATTGAAGCAGAGTATTCTTTTTCTCATTCAGTTTTGGTTTCCATATTTCAAATTCAAACATCTCAAAAGCATTGCTTTGCTACTGCAACAGATTATTATTTTCTTTTTCTTTGCATTTTTTGTTTTTTGTGAGAGGATGGGTTCTTCTGTTGTTGGAGATGAATCATTTTCTTCTTCTCCCAATTTCAATTACGATTATGATGTGTTTTTTAGTTTCAGAGGAGAAGATACTCGCTCCAATTTTATCAGTCATCTTCATATGGCCTTGCGTCTAAAGGAAGTCAACGTTTTCATAGACGACAAACTCAAAAGGGGTGAACAAATTTATGAGTCTCTTCTCAAATTTATAGAGCGATCTAGACTTTCCCTCGTTATTTTCTCTAAAGATTATGCATCTTCAACTTGGTGTTTGGATGAACTGGTGAAAATAATTGAGTGTAAGAAATCCAAAGGACAAGCAGTTTGGCCAGTGTTCTACAAGGTGGATCCATCCGAGGTTCGAAAACAAACCGGTGGGTTTGGGGAAGCATTGGCCAAACATGAAGCTAATAAGTTATTGACCAACAAGATTCAACCATGGAGGGAAGCTTTGACTTTTGCTGCTGGTTTGTCTGGTTGGGATCTAGCAAATAGGTATTTTTTTTTATTTTTTTTTAATCTTTGA

Protein sequence

MTNIGDDEHSRRRKDTDKKNRERKVQMEAIEIAEKVSDRNKFKIEIEEKESDRNKFESQVFGVSSSVGSALDGYQSLGEGDSFKNGLELKQSILFLIQFWFPYFKFKHLKSIALLLQQIIIFFFFAFFVFCERMGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRGEQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSEVRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLANRYFFLFFFNL
BLAST of CsaV3_2G005290 vs. NCBI nr
Match: KGN60910.1 (hypothetical protein Csa_2G022790 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 1.1e-88
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0

Query: 134 MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 193
           MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG
Sbjct: 1   MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 60

Query: 194 EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE 253
           EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE
Sbjct: 61  EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE 120

Query: 254 VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLAN 299
           VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLAN
Sbjct: 121 VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLAN 165

BLAST of CsaV3_2G005290 vs. NCBI nr
Match: ADU33177.1 (putative TIR-NBS class resistance protein [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 1.1e-88
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0

Query: 134 MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 193
           MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG
Sbjct: 1   MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 60

Query: 194 EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE 253
           EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE
Sbjct: 61  EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE 120

Query: 254 VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLAN 299
           VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLAN
Sbjct: 121 VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLAN 165

BLAST of CsaV3_2G005290 vs. NCBI nr
Match: XP_008454579.1 (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo])

HSP 1 Score: 298.5 bits (763), Expect = 2.6e-77
Identity = 152/165 (92.12%), Postives = 153/165 (92.73%), Query Frame = 0

Query: 134 MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 193
           MGSSVV   S  S PN NYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG
Sbjct: 1   MGSSVVRVGSSFSDPNCNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 60

Query: 194 EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE 253
           EQI ESLLK IERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAV PVFYKVDPSE
Sbjct: 61  EQISESLLKSIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVLPVFYKVDPSE 120

Query: 254 VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLAN 299
           VRKQT  FGEALAKHEANKLLTNKIQPW+EALTFAAGLSGWDLAN
Sbjct: 121 VRKQTDWFGEALAKHEANKLLTNKIQPWKEALTFAAGLSGWDLAN 165

BLAST of CsaV3_2G005290 vs. NCBI nr
Match: XP_008455151.1 (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo])

HSP 1 Score: 269.6 bits (688), Expect = 1.3e-68
Identity = 141/173 (81.50%), Postives = 146/173 (84.39%), Query Frame = 0

Query: 130 FCERMGSSVV----GDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVF 189
           FCERMGSS +                    VFFSFRGEDTRS+FISHLHMALRLK VNVF
Sbjct: 27  FCERMGSSALPXXXXXXXXXXXXXXXXXXXVFFSFRGEDTRSSFISHLHMALRLKGVNVF 86

Query: 190 IDDKLKRGEQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPV 249
           IDDKLKRG+QI ESLLK IERSRLSLVIFSK+YASSTWCLDELVKIIE KKSK QAV PV
Sbjct: 87  IDDKLKRGDQISESLLKSIERSRLSLVIFSKNYASSTWCLDELVKIIEYKKSKSQAVLPV 146

Query: 250 FYKVDPSEVRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLAN 299
           FYKVDPSEVRKQTGGFGEALAKHEANKLLTNKIQPW+EALTFAAGLSGWDLAN
Sbjct: 147 FYKVDPSEVRKQTGGFGEALAKHEANKLLTNKIQPWKEALTFAAGLSGWDLAN 199

BLAST of CsaV3_2G005290 vs. NCBI nr
Match: XP_011650108.1 (PREDICTED: TMV resistance protein N-like [Cucumis sativus])

HSP 1 Score: 253.4 bits (646), Expect = 9.6e-64
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0

Query: 175 MALRLKEVNVFIDDKLKRGEQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIEC 234
           MALRLKEVNVFIDDKLKRGEQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIEC
Sbjct: 1   MALRLKEVNVFIDDKLKRGEQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIEC 60

Query: 235 KKSKGQAVWPVFYKVDPSEVRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGW 294
           KKSKGQAVWPVFYKVDPSEVRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGW
Sbjct: 61  KKSKGQAVWPVFYKVDPSEVRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGW 120

Query: 295 DLAN 299
           DLAN
Sbjct: 121 DLAN 124

BLAST of CsaV3_2G005290 vs. TAIR10
Match: AT5G36930.2 (Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 148.3 bits (373), Expect = 7.9e-36
Identity = 74/150 (49.33%), Postives = 104/150 (69.33%), Query Frame = 0

Query: 152 YDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDD-KLKRGEQIYESLLKFIERSRLS 211
           + YDVF SFRG D R NF+SHL+ +LR   ++ F+DD +L+RGE I   LL  IE S++ 
Sbjct: 15  WTYDVFVSFRGADVRKNFLSHLYDSLRRCGISTFMDDVELQRGEYISPELLNAIETSKIL 74

Query: 212 LVIFSKDYASSTWCLDELVKIIEC-KKSKGQAVWPVFYKVDPSEVRKQTGGFGEALAKHE 271
           +V+ +KDYASS WCLDELV I++  K +    V+P+F  VDPS++R Q G + ++ +KH+
Sbjct: 75  IVVLTKDYASSAWCLDELVHIMKSHKNNPSHMVFPIFLYVDPSDIRWQQGSYAKSFSKHK 134

Query: 272 ANKLLTNKIQPWREALTFAAGLSGWDLANR 300
            N    NK++ WREALT  A +SGWD+ NR
Sbjct: 135 -NSHPLNKLKDWREALTKVANISGWDIKNR 163

BLAST of CsaV3_2G005290 vs. TAIR10
Match: AT4G16990.2 (disease resistance protein (TIR-NBS class), putative)

HSP 1 Score: 144.1 bits (362), Expect = 1.5e-34
Identity = 76/145 (52.41%), Postives = 94/145 (64.83%), Query Frame = 0

Query: 154 YDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRGEQIYESLLKFIERSRLSLVI 213
           YDVF +FRGED R + +SHL   L  K +N F D++++R  +I   LL  IE SR+SLV+
Sbjct: 9   YDVFPNFRGEDVRHSLVSHLRKELDRKFINTFNDNRIERSRKITPELLLAIENSRISLVV 68

Query: 214 FSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSEVRKQTGGFGEALAKHEANKL 273
           FSK+YASSTWCLDELVKI EC +   Q V P+FYKVDPS VRKQTG FG    +      
Sbjct: 69  FSKNYASSTWCLDELVKIQECYEKLDQMVIPIFYKVDPSHVRKQTGEFGMVFGE-TCKGR 128

Query: 274 LTNKIQPWREALTFAAGLSGWDLAN 299
             N+ + W  AL   A L+G DL N
Sbjct: 129 TENEKRKWMRALAEVAHLAGEDLRN 152

BLAST of CsaV3_2G005290 vs. TAIR10
Match: AT1G65850.2 (Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 141.0 bits (354), Expect = 1.3e-33
Identity = 72/167 (43.11%), Postives = 108/167 (64.67%), Query Frame = 0

Query: 134 MGSSVVGDESF-SSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKR 193
           + SS +   S  SSS +  + + VF SFRGED R  F+SH+H   + K +  FID+++KR
Sbjct: 27  LDSSTISSSSVPSSSSSHKWTHQVFPSFRGEDVRRGFLSHIHKEFQRKGITPFIDNEIKR 86

Query: 194 GEQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPS 253
           GE I   ++  I  S++++V+ S++YASS+WCLDELV+I++CK+   Q V P+FY+VDPS
Sbjct: 87  GESIGLEIIHAIRESKIAIVLLSRNYASSSWCLDELVEIMKCKEEFSQIVIPIFYRVDPS 146

Query: 254 EVRKQTGGFGEALAKHEANKLLTNK-IQPWREALTFAAGLSGWDLAN 299
           +V+K TG FG     +   K  TN+ I+ WR+AL      +G+D  N
Sbjct: 147 DVKKLTGNFGNVFKNNCVGK--TNEVIRKWRQALAKMGTTTGYDSRN 191

BLAST of CsaV3_2G005290 vs. TAIR10
Match: AT4G11170.1 (Disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 141.0 bits (354), Expect = 1.3e-33
Identity = 74/156 (47.44%), Postives = 101/156 (64.74%), Query Frame = 0

Query: 145 SSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRGEQIYESLLKFI 204
           +SS + ++ YDVF SFRGED R+NF+SHL      K +  F DD +KR   I   L   I
Sbjct: 2   ASSSSNSWRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHELRAAI 61

Query: 205 ERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSEVRKQTGGFGEA 264
             S++S+V+FS++YASS+WCLDEL++I++CK+ +G  V PVFYKVDPS++RKQTG FG +
Sbjct: 62  RESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMS 121

Query: 265 LAKHEANKLLTNKIQPWREALTFAAGLSG-----WD 296
             +    K    +   WR ALT AA + G     WD
Sbjct: 122 FLETCCGK-TEERQHNWRRALTDAANILGDHPQNWD 156

BLAST of CsaV3_2G005290 vs. TAIR10
Match: AT5G46470.1 (disease resistance protein (TIR-NBS-LRR class) family)

HSP 1 Score: 139.8 bits (351), Expect = 2.8e-33
Identity = 72/154 (46.75%), Postives = 102/154 (66.23%), Query Frame = 0

Query: 143 SFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRGEQIYESLLK 202
           S SSS + N+ Y VF SF GED R+ F+SH    L  K +  F D++++R + +   L  
Sbjct: 3   SSSSSSSRNWSYHVFPSFSGEDVRNTFLSHFLKELDRKLIISFKDNEIERSQSLDPELKH 62

Query: 203 FIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSEVRKQTGGFG 262
            I  SR+++V+FSK YASS+WCL+EL++I++CKK  GQ V P+FY +DPS VRKQTG FG
Sbjct: 63  GIRNSRIAVVVFSKTYASSSWCLNELLEIVKCKKEFGQLVIPIFYNLDPSHVRKQTGDFG 122

Query: 263 EALAKHEANKLLTNKIQPWREALTFAAGLSGWDL 297
           +   K   NK +  KI+ W+EALT  A + G+ +
Sbjct: 123 KIFEKTCRNKTVDEKIR-WKEALTDVANILGYHI 155

BLAST of CsaV3_2G005290 vs. Swiss-Prot
Match: sp|Q9FT77|RLM3_ARATH (Disease resistance protein RLM3 OS=Arabidopsis thaliana OX=3702 GN=RLM3 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.7e-33
Identity = 76/145 (52.41%), Postives = 94/145 (64.83%), Query Frame = 0

Query: 154 YDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRGEQIYESLLKFIERSRLSLVI 213
           YDVF +FRGED R + +SHL   L  K +N F D++++R  +I   LL  IE SR+SLV+
Sbjct: 9   YDVFPNFRGEDVRHSLVSHLRKELDRKFINTFNDNRIERSRKITPELLLAIENSRISLVV 68

Query: 214 FSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSEVRKQTGGFGEALAKHEANKL 273
           FSK+YASSTWCLDELVKI EC +   Q V P+FYKVDPS VRKQTG FG    +      
Sbjct: 69  FSKNYASSTWCLDELVKIQECYEKLDQMVIPIFYKVDPSHVRKQTGEFGMVFGE-TCKGR 128

Query: 274 LTNKIQPWREALTFAAGLSGWDLAN 299
             N+ + W  AL   A L+G DL N
Sbjct: 129 TENEKRKWMRALAEVAHLAGEDLRN 152

BLAST of CsaV3_2G005290 vs. Swiss-Prot
Match: sp|O82500|Y4117_ARATH (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN=At4g11170 PE=2 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.3e-32
Identity = 74/156 (47.44%), Postives = 101/156 (64.74%), Query Frame = 0

Query: 145 SSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRGEQIYESLLKFI 204
           +SS + ++ YDVF SFRGED R+NF+SHL      K +  F DD +KR   I   L   I
Sbjct: 2   ASSSSNSWRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHELRAAI 61

Query: 205 ERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSEVRKQTGGFGEA 264
             S++S+V+FS++YASS+WCLDEL++I++CK+ +G  V PVFYKVDPS++RKQTG FG +
Sbjct: 62  RESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMS 121

Query: 265 LAKHEANKLLTNKIQPWREALTFAAGLSG-----WD 296
             +    K    +   WR ALT AA + G     WD
Sbjct: 122 FLETCCGK-TEERQHNWRRALTDAANILGDHPQNWD 156

BLAST of CsaV3_2G005290 vs. Swiss-Prot
Match: sp|F4KHH8|RPS6C_ARATH (Disease resistance protein RPS6 OS=Arabidopsis thaliana OX=3702 GN=RPS6 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.1e-32
Identity = 72/154 (46.75%), Postives = 102/154 (66.23%), Query Frame = 0

Query: 143 SFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRGEQIYESLLK 202
           S SSS + N+ Y VF SF GED R+ F+SH    L  K +  F D++++R + +   L  
Sbjct: 3   SSSSSSSRNWSYHVFPSFSGEDVRNTFLSHFLKELDRKLIISFKDNEIERSQSLDPELKH 62

Query: 203 FIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSEVRKQTGGFG 262
            I  SR+++V+FSK YASS+WCL+EL++I++CKK  GQ V P+FY +DPS VRKQTG FG
Sbjct: 63  GIRNSRIAVVVFSKTYASSSWCLNELLEIVKCKKEFGQLVIPIFYNLDPSHVRKQTGDFG 122

Query: 263 EALAKHEANKLLTNKIQPWREALTFAAGLSGWDL 297
           +   K   NK +  KI+ W+EALT  A + G+ +
Sbjct: 123 KIFEKTCRNKTVDEKIR-WKEALTDVANILGYHI 155

BLAST of CsaV3_2G005290 vs. Swiss-Prot
Match: sp|P0DKH6|RPS6R_ARATH (Disease resistance protein RPS6 OS=Arabidopsis thaliana OX=3702 GN=RPS6 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 5.1e-32
Identity = 72/154 (46.75%), Postives = 102/154 (66.23%), Query Frame = 0

Query: 143 SFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRGEQIYESLLK 202
           S SSS + N+ Y VF SF GED R+ F+SH    L  K +  F D++++R + +   L  
Sbjct: 3   SSSSSSSRNWSYHVFPSFSGEDVRNTFLSHFLKELDRKLIISFKDNEIERSQSLDPELKH 62

Query: 203 FIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSEVRKQTGGFG 262
            I  SR+++V+FSK YASS+WCL+EL++I++CKK  GQ V P+FY +DPS VRKQTG FG
Sbjct: 63  GIRNSRIAVVVFSKTYASSSWCLNELLEIVKCKKEFGQLVIPIFYNLDPSHVRKQTGDFG 122

Query: 263 EALAKHEANKLLTNKIQPWREALTFAAGLSGWDL 297
           +   K   NK +  KI+ W+EALT  A + G+ +
Sbjct: 123 KIFEKTCRNKTVDEKIR-WKEALTDVANILGYHI 155

BLAST of CsaV3_2G005290 vs. Swiss-Prot
Match: sp|F4JNB7|RPP5_ARATH (Disease resistance protein RPP5 OS=Arabidopsis thaliana OX=3702 GN=RPP5 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 6.6e-32
Identity = 78/157 (49.68%), Postives = 99/157 (63.06%), Query Frame = 0

Query: 145 SSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRGEQIYESLLKFI 204
           +SS +    YDVF SF G D R  F+SHL  AL  K +N FID  ++R   I   L+  I
Sbjct: 3   ASSSSGRRRYDVFPSFSGVDVRKTFLSHLIEALDGKSINTFIDHGIERSRTIAPELISAI 62

Query: 205 ERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSEVRKQTGGFGEA 264
             +R+S+VIFSK+YASSTWCL+ELV+I +C    GQ V PVFY VDPSEVRKQTG FG+ 
Sbjct: 63  REARISIVIFSKNYASSTWCLNELVEIHKCFNDLGQMVIPVFYDVDPSEVRKQTGEFGKV 122

Query: 265 LAKH---EANKLLTNKIQPWREALTFAAGLSGWDLAN 299
             K      +K   ++ Q W +ALT  A ++G DL N
Sbjct: 123 FEKTCEVSKDKQPGDQKQRWVQALTDIANIAGEDLLN 159

BLAST of CsaV3_2G005290 vs. TrEMBL
Match: tr|A0A0A0LFS4|A0A0A0LFS4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G022790 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 7.4e-89
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0

Query: 134 MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 193
           MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG
Sbjct: 1   MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 60

Query: 194 EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE 253
           EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE
Sbjct: 61  EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE 120

Query: 254 VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLAN 299
           VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLAN
Sbjct: 121 VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLAN 165

BLAST of CsaV3_2G005290 vs. TrEMBL
Match: tr|E7CHD2|E7CHD2_CUCSA (Putative TIR-NBS class resistance protein OS=Cucumis sativus OX=3659 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 7.4e-89
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0

Query: 134 MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 193
           MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG
Sbjct: 1   MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 60

Query: 194 EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE 253
           EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE
Sbjct: 61  EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE 120

Query: 254 VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLAN 299
           VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLAN
Sbjct: 121 VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLAN 165

BLAST of CsaV3_2G005290 vs. TrEMBL
Match: tr|A0A1S3BZQ4|A0A1S3BZQ4_CUCME (TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494963 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.7e-77
Identity = 152/165 (92.12%), Postives = 153/165 (92.73%), Query Frame = 0

Query: 134 MGSSVVGDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 193
           MGSSVV   S  S PN NYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG
Sbjct: 1   MGSSVVRVGSSFSDPNCNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLKRG 60

Query: 194 EQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDPSE 253
           EQI ESLLK IERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAV PVFYKVDPSE
Sbjct: 61  EQISESLLKSIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVLPVFYKVDPSE 120

Query: 254 VRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLAN 299
           VRKQT  FGEALAKHEANKLLTNKIQPW+EALTFAAGLSGWDLAN
Sbjct: 121 VRKQTDWFGEALAKHEANKLLTNKIQPWKEALTFAAGLSGWDLAN 165

BLAST of CsaV3_2G005290 vs. TrEMBL
Match: tr|A0A1S3C088|A0A1S3C088_CUCME (TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495388 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 8.6e-69
Identity = 141/173 (81.50%), Postives = 146/173 (84.39%), Query Frame = 0

Query: 130 FCERMGSSVV----GDESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVF 189
           FCERMGSS +                    VFFSFRGEDTRS+FISHLHMALRLK VNVF
Sbjct: 27  FCERMGSSALPXXXXXXXXXXXXXXXXXXXVFFSFRGEDTRSSFISHLHMALRLKGVNVF 86

Query: 190 IDDKLKRGEQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPV 249
           IDDKLKRG+QI ESLLK IERSRLSLVIFSK+YASSTWCLDELVKIIE KKSK QAV PV
Sbjct: 87  IDDKLKRGDQISESLLKSIERSRLSLVIFSKNYASSTWCLDELVKIIEYKKSKSQAVLPV 146

Query: 250 FYKVDPSEVRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLAN 299
           FYKVDPSEVRKQTGGFGEALAKHEANKLLTNKIQPW+EALTFAAGLSGWDLAN
Sbjct: 147 FYKVDPSEVRKQTGGFGEALAKHEANKLLTNKIQPWKEALTFAAGLSGWDLAN 199

BLAST of CsaV3_2G005290 vs. TrEMBL
Match: tr|A0A0A0KNK0|A0A0A0KNK0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G494390 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.5e-62
Identity = 123/168 (73.21%), Postives = 140/168 (83.33%), Query Frame = 0

Query: 134 MGSSVVG--DESFSSSPNFNYDYDVFFSFRGEDTRSNFISHLHMALRLKEVNVFIDDKLK 193
           MGSS+VG    S S S N  + YDVF SFRGEDTR+NF SHL  ALR K VN FIDDKL+
Sbjct: 1   MGSSLVGLAQSSSSCSSNLKWSYDVFLSFRGEDTRNNFTSHLDRALREKGVNFFIDDKLE 60

Query: 194 RGEQIYESLLKFIERSRLSLVIFSKDYASSTWCLDELVKIIECKKSKGQAVWPVFYKVDP 253
           RG QI ESLLK I+ S++S++IFSK+YASSTWCLDELVKI++C KS G  V+PVFYKVDP
Sbjct: 61  RGGQISESLLKSIDGSKISIIIFSKNYASSTWCLDELVKIVQCMKSMGHIVFPVFYKVDP 120

Query: 254 SEVRKQTGGFGEALAKHEANKLLTNKIQPWREALTFAAGLSGWDLANR 300
           SEVRKQTGGFGEALAKHEAN+L+TNK+QPW+EALT AA LSGWDLA R
Sbjct: 121 SEVRKQTGGFGEALAKHEANELMTNKVQPWKEALTTAASLSGWDLATR 168

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN60910.11.1e-88100.00hypothetical protein Csa_2G022790 [Cucumis sativus][more]
ADU33177.11.1e-88100.00putative TIR-NBS class resistance protein [Cucumis sativus][more]
XP_008454579.12.6e-7792.12PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo][more]
XP_008455151.11.3e-6881.50PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis melo][more]
XP_011650108.19.6e-64100.00PREDICTED: TMV resistance protein N-like [Cucumis sativus][more]
Match NameE-valueIdentityDescription
AT5G36930.27.9e-3649.33Disease resistance protein (TIR-NBS-LRR class) family[more]
AT4G16990.21.5e-3452.41disease resistance protein (TIR-NBS class), putative[more]
AT1G65850.21.3e-3343.11Disease resistance protein (TIR-NBS-LRR class) family[more]
AT4G11170.11.3e-3347.44Disease resistance protein (TIR-NBS-LRR class) family[more]
AT5G46470.12.8e-3346.75disease resistance protein (TIR-NBS-LRR class) family[more]
Match NameE-valueIdentityDescription
sp|Q9FT77|RLM3_ARATH2.7e-3352.41Disease resistance protein RLM3 OS=Arabidopsis thaliana OX=3702 GN=RLM3 PE=2 SV=... [more]
sp|O82500|Y4117_ARATH2.3e-3247.44Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana OX=3702 GN... [more]
sp|F4KHH8|RPS6C_ARATH5.1e-3246.75Disease resistance protein RPS6 OS=Arabidopsis thaliana OX=3702 GN=RPS6 PE=1 SV=... [more]
sp|P0DKH6|RPS6R_ARATH5.1e-3246.75Disease resistance protein RPS6 OS=Arabidopsis thaliana OX=3702 GN=RPS6 PE=1 SV=... [more]
sp|F4JNB7|RPP5_ARATH6.6e-3249.68Disease resistance protein RPP5 OS=Arabidopsis thaliana OX=3702 GN=RPP5 PE=1 SV=... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LFS4|A0A0A0LFS4_CUCSA7.4e-89100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G022790 PE=4 SV=1[more]
tr|E7CHD2|E7CHD2_CUCSA7.4e-89100.00Putative TIR-NBS class resistance protein OS=Cucumis sativus OX=3659 PE=4 SV=1[more]
tr|A0A1S3BZQ4|A0A1S3BZQ4_CUCME1.7e-7792.12TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494963... [more]
tr|A0A1S3C088|A0A1S3C088_CUCME8.6e-6981.50TMV resistance protein N-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495388... [more]
tr|A0A0A0KNK0|A0A0A0KNK0_CUCSA3.5e-6273.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G494390 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR035897Toll_tir_struct_dom_sf
IPR000157TIR_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G005290.1CsaV3_2G005290.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 39..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availablePANTHERPTHR11017:SF200SUBFAMILY NOT NAMEDcoord: 142..298
NoneNo IPR availablePANTHERPTHR11017LEUCINE-RICH REPEAT-CONTAINING PROTEINcoord: 142..298
IPR000157Toll/interleukin-1 receptor homology (TIR) domainSMARTSM00255till_3coord: 153..291
e-value: 3.0E-41
score: 153.1
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPFAMPF01582TIRcoord: 154..286
e-value: 3.0E-44
score: 150.8
IPR000157Toll/interleukin-1 receptor homology (TIR) domainPROSITEPS50104TIRcoord: 152..291
score: 24.757
IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilyGENE3DG3DSA:3.40.50.10140coord: 149..301
e-value: 2.9E-62
score: 211.4
IPR035897Toll/interleukin-1 receptor homology (TIR) domain superfamilySUPERFAMILYSSF52200Toll/Interleukin receptor TIR domaincoord: 144..294

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None