CsaV3_2G004780 (gene) Cucumber (Chinese Long) v3

NameCsaV3_2G004780
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionIsomultiflorenol synthase
Locationchr2 : 2596089 .. 2596918 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAAGGAGGTGTTTACCTAGTGGAGATGTTCTGGTGCACTTACTGACCCATGATATATTTTTCAAAAAACTTCTTCTACCCTTAATCACCTTGTTTCCTAAAAAAAGAAAAAAGGTATTGCATTTTTATTTTTTGTATATTATATCAAATATTGATATGATTAATTATTATTATTGAATGTACCATGCAAATTGAGATATATACCTTTGATCAAAATTATTCGATAAAATTACTACTACTAAGATAAAATTACTTTTTCTTGTTCAAAATCACTTTGATCAAAATTATTCGAAATCAGTTGAATTAACTTTTTACTTTTTCCATGTTATTTTTGTTCATTTTGTTATGCTAAAATTCACTTCATCAGAAATATTCAAAATCTGACCTTTGGTTATATTTTGAAAACAATTCCATATTGTCAAATATTTAGATTATAGGTACTTATTTCTACTAGAAGATTAAAGTAATTTTTATTTAAATTCAAATTGTCTTAAAATAATTAACCATTTAAATGAATTTTTTTTATCAAAAAAAATAACTATATTGTTGAGTACTTCCACTCTATCAAATGAACAGTGATTTTAAGCTTTAAAAAAAACACCCTCAAATATATCATTCAAAACGTTTTAACTAATTTAAATATTTTTTCTATCTTTTATAAATAGTTTGAATATTTTGGTATTGATGTCAAATATTTTTCATTCATTTAATTTACTTCAATAACAAGAATTAATTCTACTTAACAGGAAAATATAGACCCCAGTCCAATTCATCATGCTGCCAAGGTGTTGATCAATTCTCAAACTGAAGATGGTGATTTTCCTCAAGAG

mRNA sequence

CTAAGGAGGTGTTTACCTAGTGGAGATGTTCTGGTGCACTTACTGACCCATGATATATTTTTCAAAAAACTTCTTCTACCCTTAATCACCTTGTTTCCTAAAAAAAGAAAAAAGGAAAATATAGACCCCAGTCCAATTCATCATGCTGCCAAGGTGTTGATCAATTCTCAAACTGAAGATGGTGATTTTCCTCAAGAG

Coding sequence (CDS)

CTAAGGAGGTGTTTACCTAGTGGAGATGTTCTGGTGCACTTACTGACCCATGATATATTTTTCAAAAAACTTCTTCTACCCTTAATCACCTTGTTTCCTAAAAAAAGAAAAAAGGAAAATATAGACCCCAGTCCAATTCATCATGCTGCCAAGGTGTTGATCAATTCTCAAACTGAAGATGGTGATTTTCCTCAAGAG

Protein sequence

LRRCLPSGDVLVHLLTHDIFFKKLLLPLITLFPKKRKKENIDPSPIHHAAKVLINSQTEDGDFPQE
BLAST of CsaV3_2G004780 vs. NCBI nr
Match: XP_011650103.1 (PREDICTED: isomultiflorenol synthase-like [Cucumis sativus])

HSP 1 Score: 138.3 bits (347), Expect = 9.6e-30
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0

Query: 1   LRRCLPSGDVLVHLLTHDIFFKKLLLPLITLFPKKRKKENIDPSPIHHAAKVLINSQTED 60
           LRRCLPSGDVLVHLLTHDIFFKKLLLPLITLFPKKRKKENIDPSPIHHAAKVLINSQTED
Sbjct: 118 LRRCLPSGDVLVHLLTHDIFFKKLLLPLITLFPKKRKKENIDPSPIHHAAKVLINSQTED 177

Query: 61  GDFPQE 67
           GDFPQE
Sbjct: 178 GDFPQE 183

BLAST of CsaV3_2G004780 vs. NCBI nr
Match: XP_011648793.1 (PREDICTED: LOW QUALITY PROTEIN: isomultiflorenol synthase [Cucumis sativus])

HSP 1 Score: 56.6 bits (135), Expect = 3.7e-05
Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0

Query: 38  KENIDPSPIHHAAKVLINSQTEDGDFPQE 67
           +ENIDP+PIH AAKVLIN QTEDGDFPQE
Sbjct: 701 QENIDPNPIHRAAKVLINYQTEDGDFPQE 729

BLAST of CsaV3_2G004780 vs. NCBI nr
Match: XP_004139371.2 (PREDICTED: isomultiflorenol synthase-like, partial [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 4.8e-05
Identity = 24/27 (88.89%), Postives = 27/27 (100.00%), Query Frame = 0

Query: 40  NIDPSPIHHAAKVLINSQTEDGDFPQE 67
           +IDP+PIHHAAKVLINSQTEDGDFPQ+
Sbjct: 695 DIDPNPIHHAAKVLINSQTEDGDFPQK 721

BLAST of CsaV3_2G004780 vs. NCBI nr
Match: KGN60853.1 (hypothetical protein Csa_2G013830 [Cucumis sativus])

HSP 1 Score: 55.5 bits (132), Expect = 8.2e-05
Identity = 24/27 (88.89%), Postives = 26/27 (96.30%), Query Frame = 0

Query: 40  NIDPSPIHHAAKVLINSQTEDGDFPQE 67
           NIDP+PIH AAK+LINSQTEDGDFPQE
Sbjct: 615 NIDPNPIHRAAKLLINSQTEDGDFPQE 641

BLAST of CsaV3_2G004780 vs. NCBI nr
Match: XP_011648794.1 (PREDICTED: isomultiflorenol synthase-like [Cucumis sativus])

HSP 1 Score: 55.5 bits (132), Expect = 8.2e-05
Identity = 24/27 (88.89%), Postives = 26/27 (96.30%), Query Frame = 0

Query: 40  NIDPSPIHHAAKVLINSQTEDGDFPQE 67
           NIDP+PIH AAK+LINSQTEDGDFPQE
Sbjct: 693 NIDPNPIHRAAKLLINSQTEDGDFPQE 719

BLAST of CsaV3_2G004780 vs. TAIR10
Match: AT1G78955.1 (camelliol C synthase 1)

HSP 1 Score: 46.2 bits (108), Expect = 9.0e-06
Identity = 19/25 (76.00%), Postives = 23/25 (92.00%), Query Frame = 0

Query: 42  DPSPIHHAAKVLINSQTEDGDFPQE 67
           DPSP+H AAK+LINSQ E+GDFPQ+
Sbjct: 699 DPSPLHRAAKLLINSQLENGDFPQQ 723

BLAST of CsaV3_2G004780 vs. TAIR10
Match: AT1G78500.1 (Terpenoid cyclases family protein)

HSP 1 Score: 45.4 bits (106), Expect = 1.5e-05
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 0

Query: 42  DPSPIHHAAKVLINSQTEDGDFPQE 67
           DP P+H AAKVLINSQ ++GDFPQE
Sbjct: 705 DPLPVHRAAKVLINSQLDNGDFPQE 729

BLAST of CsaV3_2G004780 vs. TAIR10
Match: AT3G29255.1 (catalytics;intramolecular transferases)

HSP 1 Score: 45.4 bits (106), Expect = 1.5e-05
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 0

Query: 42  DPSPIHHAAKVLINSQTEDGDFPQE 67
           DP P+H AAKVLINSQ E+GDFPQ+
Sbjct: 645 DPLPVHRAAKVLINSQMENGDFPQQ 669

BLAST of CsaV3_2G004780 vs. TAIR10
Match: AT5G42600.1 (marneral synthase)

HSP 1 Score: 45.1 bits (105), Expect = 2.0e-05
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 0

Query: 42  DPSPIHHAAKVLINSQTEDGDFPQE 67
           DPSP+H AAKVLINSQ + GDFPQ+
Sbjct: 700 DPSPVHRAAKVLINSQLDIGDFPQQ 724

BLAST of CsaV3_2G004780 vs. TAIR10
Match: AT4G15370.1 (baruol synthase 1)

HSP 1 Score: 44.3 bits (103), Expect = 3.4e-05
Identity = 18/25 (72.00%), Postives = 22/25 (88.00%), Query Frame = 0

Query: 42  DPSPIHHAAKVLINSQTEDGDFPQE 67
           DP P+H AAKVLINSQ ++GDFPQ+
Sbjct: 699 DPLPVHRAAKVLINSQMDNGDFPQQ 723

BLAST of CsaV3_2G004780 vs. Swiss-Prot
Match: sp|Q948R6|IMFS_LUFAE (Isomultiflorenol synthase OS=Luffa aegyptiaca OX=3670 GN=IMS1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.3e-06
Identity = 22/27 (81.48%), Postives = 26/27 (96.30%), Query Frame = 0

Query: 40  NIDPSPIHHAAKVLINSQTEDGDFPQE 67
           ++DP+PIH AAK+LINSQTEDGDFPQE
Sbjct: 693 DVDPTPIHRAAKLLINSQTEDGDFPQE 719

BLAST of CsaV3_2G004780 vs. Swiss-Prot
Match: sp|B9X0J1|STBOS_STERE (Baccharis oxide synthase OS=Stevia rebaudiana OX=55670 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.5e-05
Identity = 21/32 (65.62%), Postives = 27/32 (84.38%), Query Frame = 0

Query: 35  KRKKENIDPSPIHHAAKVLINSQTEDGDFPQE 67
           + K+E  DP+P+H AAK+LINSQ E+GDFPQE
Sbjct: 690 RSKQEERDPTPLHRAAKLLINSQMENGDFPQE 721

BLAST of CsaV3_2G004780 vs. Swiss-Prot
Match: sp|Q6BE25|CAS1_CUCPE (Cycloartenol synthase OS=Cucurbita pepo OX=3663 GN=CPX PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 4.3e-05
Identity = 20/25 (80.00%), Postives = 23/25 (92.00%), Query Frame = 0

Query: 42  DPSPIHHAAKVLINSQTEDGDFPQE 67
           DP+P+H AA+VLINSQ EDGDFPQE
Sbjct: 704 DPTPLHRAARVLINSQMEDGDFPQE 728

BLAST of CsaV3_2G004780 vs. Swiss-Prot
Match: sp|O82140|BAMS1_PANGI (Beta-Amyrin Synthase 1 OS=Panax ginseng OX=4054 GN=OSCPNY1 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 9.5e-05
Identity = 19/25 (76.00%), Postives = 23/25 (92.00%), Query Frame = 0

Query: 42  DPSPIHHAAKVLINSQTEDGDFPQE 67
           DP+P+H AAK+LINSQ EDGDFPQ+
Sbjct: 699 DPTPLHRAAKLLINSQMEDGDFPQQ 723

BLAST of CsaV3_2G004780 vs. Swiss-Prot
Match: sp|E2IUA8|FRIES_KALDA (Friedelin synthase OS=Kalanchoe daigremontiana OX=23013 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 9.5e-05
Identity = 19/25 (76.00%), Postives = 23/25 (92.00%), Query Frame = 0

Query: 42  DPSPIHHAAKVLINSQTEDGDFPQE 67
           DP+P+H AAK+LINSQ EDGDFPQ+
Sbjct: 698 DPTPLHRAAKLLINSQLEDGDFPQQ 722

BLAST of CsaV3_2G004780 vs. TrEMBL
Match: tr|A0A0A0LG93|A0A0A0LG93_CUCSA (Terpene cyclase/mutase family member OS=Cucumis sativus OX=3659 GN=Csa_2G013830 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.4e-05
Identity = 24/27 (88.89%), Postives = 26/27 (96.30%), Query Frame = 0

Query: 40  NIDPSPIHHAAKVLINSQTEDGDFPQE 67
           NIDP+PIH AAK+LINSQTEDGDFPQE
Sbjct: 615 NIDPNPIHRAAKLLINSQTEDGDFPQE 641

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011650103.19.6e-30100.00PREDICTED: isomultiflorenol synthase-like [Cucumis sativus][more]
XP_011648793.13.7e-0586.21PREDICTED: LOW QUALITY PROTEIN: isomultiflorenol synthase [Cucumis sativus][more]
XP_004139371.24.8e-0588.89PREDICTED: isomultiflorenol synthase-like, partial [Cucumis sativus][more]
KGN60853.18.2e-0588.89hypothetical protein Csa_2G013830 [Cucumis sativus][more]
XP_011648794.18.2e-0588.89PREDICTED: isomultiflorenol synthase-like [Cucumis sativus][more]
Match NameE-valueIdentityDescription
AT1G78955.19.0e-0676.00camelliol C synthase 1[more]
AT1G78500.11.5e-0576.00Terpenoid cyclases family protein[more]
AT3G29255.11.5e-0576.00catalytics;intramolecular transferases[more]
AT5G42600.12.0e-0576.00marneral synthase[more]
AT4G15370.13.4e-0572.00baruol synthase 1[more]
Match NameE-valueIdentityDescription
sp|Q948R6|IMFS_LUFAE1.3e-0681.48Isomultiflorenol synthase OS=Luffa aegyptiaca OX=3670 GN=IMS1 PE=1 SV=1[more]
sp|B9X0J1|STBOS_STERE1.5e-0565.63Baccharis oxide synthase OS=Stevia rebaudiana OX=55670 PE=1 SV=1[more]
sp|Q6BE25|CAS1_CUCPE4.3e-0580.00Cycloartenol synthase OS=Cucurbita pepo OX=3663 GN=CPX PE=1 SV=1[more]
sp|O82140|BAMS1_PANGI9.5e-0576.00Beta-Amyrin Synthase 1 OS=Panax ginseng OX=4054 GN=OSCPNY1 PE=1 SV=1[more]
sp|E2IUA8|FRIES_KALDA9.5e-0576.00Friedelin synthase OS=Kalanchoe daigremontiana OX=23013 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0LG93|A0A0A0LG93_CUCSA5.4e-0588.89Terpene cyclase/mutase family member OS=Cucumis sativus OX=3659 GN=Csa_2G013830 ... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_2G004780.1CsaV3_2G004780.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None