CsaV3_2G002220 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGGGAAGGCTTTCTTAGTTGGTTGATACGACTTGCCGAATGGGACAAACTTTGTTTTGCTTTGTTGTTGATGTTATTTTTGTAATTTTAAAAACAAAAAAAGTGTAAACATTTGTTTGCAAAATGGAATTGTGCAATAACAATAAATATCGATAGTTTCAAAGGAAAAAGAACCCAAAAGGAGAGAAGATTATTGACAGCTCACAAACTACTTATTGACAGCAGAATTCTGTCCTCAAAGATCAAACAACTGACCGAATTACCAATCCAACAATGCCAATTCATACTTTCCTCCATGAGTTTCCACTATTCATTTCAATTTGATTCAATTCTTCAATCCCACTTCCCACTTCCCACTTCAGCTTTTCAATCTTCCACAAAATTCATTACTTCCAGAATTTCAAGTTTGGAATCTCAAAAAGCTACAAGATTAAGCTACAAATATTGTGGAGGAAGATCTCGAATAGTTCTTTCTTCTCTGGAAAATTGCTTTTCTTCAGCTTATTCTCCGATTTTGACACTGTTCTTACCGCTTTTTGGAGGGAATTAGGGTTAGGGTTTTTTTTTTTTTCCTTCTGAAAGAATAGACAAAAGGGTGTTGCTCTGTTAGTGTGGTCGTCATGGGTGATGAGAAATCGGCTATTGCCATGGCGAGCAGAGAACGAGATCGAGAGCTTCTTATTCCCGTTGCGGAGTCCGCTATTGATGAGGCATCTGCTAAACCTTCGTCGTCTTCCTCCTCGTCTCATCATTCTGGCAGAGAGGTATAATTTAGGCTGTCCATGCTTCATTTTTAACTGGTTGTTAGATTCGCCGACAACGTTTTTAGTTTAGCGCTCGGTAAATTTGCTATGGGTTTCTTTGTGTCAGAGCAAAGCATATGGGTACTTTTAACACAACTTGCCTCGTCTTACTAATTCTTGATCAATTCGTTCAGAAAATGGATGAATTATCTTTGCCCTAGAACTTCGTTTGACGAAATTGATTGATGTTGGTTTTGTTTCAATTCCTAGCAGCAATTGAATATTTCAAATCAATATTAAATTTCAGTATGTTCTTCTTGATTAGAATATTCACTGGGGCAATTTGAATTTATTAGGTTTTATGTTTTTTTCGTGGCTATGCATTTTTCTTTCTTATTATCTGCCTGACCAGTCTGTTCAATACTGGTTTTAGACATTTTCCAAGGTTGTTAGAAGCTGGGCCTCTAAGAAGTTCATGACTGGATGGTGAGCTCTTCTTTCTCTTTAGTTTATGTCATGTCATATTAGCTTGTTTGGTATCTTGATATCTATTGAAGTGGATTATCCTTCGTCTTACAGACATTGCAGCAGTCTGTTATATATCATTGGATCAGTTTTATGCACATGTCAATGCATTGTTTTATTCCTCTGTCATAACTCATAACAATAGCACTATGATTGCACGCTACCTGATCTCTATTGGCGAGCATCTTCATATCACATAATTTATCTTAGTTACTTTTCATGTACTTTACCTTGGCTTTCGCTTAACTAAATTTTCTACTATTGCCCATGGGTTGATGCTCCAAACAATTTCATATTATTATTAAATTTAGCTGGTTTATGTGTTTCCTTTGGTGGTCACCAGCTATAGAATAGTGGTTTAGCAGTTGTCCAAGTGTATTGATGCTGTTTGGCAATAATTGAAGGTGTAGGGTATCTAGGCTGAACGTGGGAGAAAATCTTCATGTTTTGGAAAATTGTAACGTCATAGAGTTTAATTTATTGGTCGGTGAAGAGACCATGAACCATTTGTTCAAGTAACGTTCTGAAGCATGTTTCTACATTTCTGGAATTTTCTGATTTCTCTCAATTGGCCGTTCAAGTAACATCTGTCTTTTGAAGTCAGGTTATGCTTGGAAGTGATTATGAAATGGTTAAAATCACTTTTGTCATTTTAAAAAATGAAACATGTTTTTAAGCCTTCAAAGTTAATTTTAATGGTATAAAAATTACATTTAGAAGTGTAAGATTTAATATTATTTAATTTTGAGGGATTACACGTGTGATTTGTATGATTTTCAGAATGAAAAAAGTGACTTTGACAATTGAAAAATTACTGTCAAACATGCACTTAATGTCCTGAGGGTTAAGCTTCCTTCTTTAAGGGATCTTTCCTAAGGCTAACAATAAATGCTTGTGCTTAATGACTAAATTTTGACTATATACATAAAATGAATTTTTTTCTCCATTACTAATCATTAGTCCAAAATTCTTGTTAACTCTTGCTCTCGATAACGGTCACAGTCACGGATATGAATGATCATTTCTAGTCTAGTTCTTTCTCTTTCCCAATTAGAAATTAAACTTGTATAATTGAAGTTATTTTTTGGACAATGGCAAGGTGGCGAACTAGTCATGCCTAGTTCCACCAATTTTTCTGTCTTGTCTAGTGTTGTACTTTCACTGCCTATTTCTGCATTTTTTTTGTTTTGATAAGATGCTTATCTCTGCATTCATGCTTCAATTTTCTAAAATAAAATGCTTCCTGCAGTGTCATCCTTTTTCCTATAGCAATAACATTCTACATAACATGGTGGTTTATTCGTTTTGTGGATGGATTCTTCTCTCCAATCTATGCACATCTTGGAATTAATATCTTTGGTAAGCAATTATTTCGTCTTTTGTTCTCCTGTGTATGGTATTTATTTGACATGTTTAATACACTAACTTGTGGTTGGTGTCACTTCATGTTTGGGATTTCCCCTTGCTAGTTTCCTTCTTTATCCTAACACAGCATACAGATAATCTATGCAGTTAGGGTGCCATGTGCTTGAATAAGACTCTTAGCTTTCTGATTTACAACGATGGCTTGATTACTCTTGCAAATATTCTTATATTTAACAAGCAACTAATATTTTTGAGATGCAATTCCTTTCGTCCACAATTTTTAACAAAATGCTTGGATGTACTTTAAGGATAAGCTAGCCTTGATGGTAAGAGATTGAGATGTTTTGAGACTTCCTTTTCAAGGTCTTAGGTTCCCCTACAGATTACCTAGAAAGCTTAATTTAAAACCTTTTTGCCTGTTGGAGGCTTGGAGCTAGTCTTTTGGTGATTGCAGTTTTCCTGGGGACAAGTTGGGATGGATTAAGAGCACAACTCAAGGAGTATGCCCCCCCCCCCCCCCCCCCAATTATTCTAAACACATGTTTAGATGTTCAGAACCATACTGAAATTTTTGTACCAGATAAATCTCAGGAATTTACTGCTTTTCTTGGTGTTTACCTTCTGAGTCTTTCATTTCTCAAGAATATCAGATCATAATACTCTGATTATCTACTTGCAACTTGCCTCATATGTATTGTATGTCTCTTCTAATTCAAGTTGGCCGTCGTTTTTTGTTCTTGCATCTTGAATAGGTCTTGGATTTGTAACTTCCATTACATTCATCTTCCTGGTCGGTGTGTTTATGTCCTCTTGGTTGGGAGCATCTGTTCTGGGCCTTGGGGAGTGGTTTATCAAGAGGATGCCATTTGTGCGTCATATCTACAATGCTTCTAAGCAAATTAGTTCTGCAATATCATCAGGTGGTTATTGATTATTTGTAGTTACCCTTATTTGGTTGCTTGATTTCTGTCAGTTAATTGTTTTATTTTTATAATCAGACCAAAACTCACAGGCCTTCAAGGAAGTAGCTATCATAAGACATCCTCGTATTGGCGAATATGCATTTGGTTTCATCACTTCGTCCGTAGTTCTCCAGGTAAACTGAAAGCAAACAAAATCTGATATCTTCTTTTGAAAATATCAATTTATTCATTAAATCAATTAGAATTTTAAACTTTAGACCTTTGTTCTGAAAACTATTACACACTTGATTACAACTTTTTCTCTAATTTTGTGTTAATTCTCAGCATTTAAAAATGTCTTTTACATGTTGGAAAATTATGTATTCACAGTTTTAAAGCAGACCCCTAGTGAAGGGTCTAAATTGATTGTGTGAAAATTTTATTGATACAATTATTAGCTTGAGGTTTTAATGGATTAAATCTACAAAAAATTGTGGTGGGGGCGTTCTTGAGCAGTAGTGCTCAGCTCAGACTTTGGAAAATGCATTTGCTTACTCCTCTCACCTAAGTAAACTTGATTATCTGACCCTTCTTTTTTGAGGCAGAGCTATTCTGGGGAGGAGGAGCTATGCTGTGTCTATGTTCCAACAAACCATCTCTATATTGGCGACGTTTTCTTGGTTCATACCAAAGATGTTATTAGACCAAATTTATCAGTTCGAGAAGGAATTGGTGAGGCTTCCATTTCACTTTTTTCTTGCTTGCATAAATTTCCCTATATGCTACTGTCAAGTCCAATATAACCGAACTGAACTGTCATTTCCGGGGCTTCATAGAGTTGGTATTCCTATTCTCGGTTACATTACATTTCAACACTATTGCGTGGTTTGAGCAAGTTCTTGTGACAGAATACAAATAGGTTAGATAAGAATTGTACTCGAGGTTAGAGTTGGGATTAATTCATTGATACATGGAAAATGCTGAAAGTTTCCCTCATATTCTCAAAACTGAAATGTTGATGGGAAATAAAGAACTGAATTTTTGTGTGTGTGTATATGTGTGTGTGTGTGTGATGAACCATATTCTCACTGGAGATCAGTCATAATTCTGTCATTATTTTTGCGATTTTATTGCAGAAATCGTCGTCTCCGGAGGAATGTCAATGCCCCAGATACTTTCAACAATGAATTCCGAGATTATGACCATAGACAGAAGTAGACTTGAGAGAAGTTAAGAATTGGGATATTAGGTTATTAGTAGCAGCAACATCTGCATATCCTCTTCTTCACCTTCGGATTCGAACCGACTACGCGACAAACCATCATCTGGGTAAGTGTAAGTGCAAGGCCGATATTGTTGCATCCCAGTGGTTAATTTCATGGCAGTGTGATTTGTGAACTGAGTTACCTTGTGAGAGTCTATCATTTTGATAGTTCAATATAGTTTAGTTTATTACATGGTCTTGAGAGGACTTCTGAAGAGTTGGATTTCTTTGTCATTGCTTACTCTTCTTTACTAAAATCAGTTCATTTATATTGATTCATGAAATAGTTTTGTACATGTTCGTGTTAAAGATTCATAAAAAAAAATATTCATTTAACATCAATTCTTGTTTATTTTGTGTTGTGACGTTTCATCCCGTAGGTGAGAGGTTCGATCTCCCCCGTTAAAAAAACCATGTCATCATGATATGTTTGGTTGGTGGCAGTGGA ATGGGTGATGAGAAATCGGCTATTGCCATGGCGAGCAGAGAACGAGATCGAGAGCTTCTTATTCCCGTTGCGGAGTCCGCTATTGATGAGGCATCTGCTAAACCTTCGTCGTCTTCCTCCTCGTCTCATCATTCTGGCAGAGAGACATTTTCCAAGGTTGTTAGAAGCTGGGCCTCTAAGAAGTTCATGACTGGATGTGTCATCCTTTTTCCTATAGCAATAACATTCTACATAACATGGTGGTTTATTCGTTTTGTGGATGGATTCTTCTCTCCAATCTATGCACATCTTGGAATTAATATCTTTGGTCTTGGATTTGTAACTTCCATTACATTCATCTTCCTGGTCGGTGTGTTTATGTCCTCTTGGTTGGGAGCATCTGTTCTGGGCCTTGGGGAGTGGTTTATCAAGAGGATGCCATTTGTGCGTCATATCTACAATGCTTCTAAGCAAATTAGTTCTGCAATATCATCAGACCAAAACTCACAGGCCTTCAAGGAAGTAGCTATCATAAGACATCCTCGTATTGGCGAATATGCATTTGGTTTCATCACTTCGTCCGTAGTTCTCCAGAGCTATTCTGGGGAGGAGGAGCTATGCTGTGTCTATGTTCCAACAAACCATCTCTATATTGGCGACGTTTTCTTGGTTCATACCAAAGATGTTATTAGACCAAATTTATCAGTTCGAGAAGGAATTGAAATCGTCGTCTCCGGAGGAATGTCAATGCCCCAGATACTTTCAACAATGAATTCCGAGATTATGACCATAGACAGAAGTAGACTTGAGAGAAGTTAA ATGGGTGATGAGAAATCGGCTATTGCCATGGCGAGCAGAGAACGAGATCGAGAGCTTCTTATTCCCGTTGCGGAGTCCGCTATTGATGAGGCATCTGCTAAACCTTCGTCGTCTTCCTCCTCGTCTCATCATTCTGGCAGAGAGACATTTTCCAAGGTTGTTAGAAGCTGGGCCTCTAAGAAGTTCATGACTGGATGTGTCATCCTTTTTCCTATAGCAATAACATTCTACATAACATGGTGGTTTATTCGTTTTGTGGATGGATTCTTCTCTCCAATCTATGCACATCTTGGAATTAATATCTTTGGTCTTGGATTTGTAACTTCCATTACATTCATCTTCCTGGTCGGTGTGTTTATGTCCTCTTGGTTGGGAGCATCTGTTCTGGGCCTTGGGGAGTGGTTTATCAAGAGGATGCCATTTGTGCGTCATATCTACAATGCTTCTAAGCAAATTAGTTCTGCAATATCATCAGACCAAAACTCACAGGCCTTCAAGGAAGTAGCTATCATAAGACATCCTCGTATTGGCGAATATGCATTTGGTTTCATCACTTCGTCCGTAGTTCTCCAGAGCTATTCTGGGGAGGAGGAGCTATGCTGTGTCTATGTTCCAACAAACCATCTCTATATTGGCGACGTTTTCTTGGTTCATACCAAAGATGTTATTAGACCAAATTTATCAGTTCGAGAAGGAATTGAAATCGTCGTCTCCGGAGGAATGTCAATGCCCCAGATACTTTCAACAATGAATTCCGAGATTATGACCATAGACAGAAGTAGACTTGAGAGAAGTTAA MGDEKSAIAMASRERDRELLIPVAESAIDEASAKPSSSSSSSHHSGRETFSKVVRSWASKKFMTGCVILFPIAITFYITWWFIRFVDGFFSPIYAHLGINIFGLGFVTSITFIFLVGVFMSSWLGASVLGLGEWFIKRMPFVRHIYNASKQISSAISSDQNSQAFKEVAIIRHPRIGEYAFGFITSSVVLQSYSGEEELCCVYVPTNHLYIGDVFLVHTKDVIRPNLSVREGIEIVVSGGMSMPQILSTMNSEIMTIDRSRLERS
BLAST of CsaV3_2G002220 vs. NCBI nr
Match: XP_004139344.1 (PREDICTED: protein CONTINUOUS VASCULAR RING 1-like [Cucumis sativus] >KGN60614.1 hypothetical protein Csa_2G004150 [Cucumis sativus]) HSP 1 Score: 491.1 bits (1263), Expect = 2.4e-135 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. NCBI nr
Match: XP_008458389.1 (PREDICTED: protein CONTINUOUS VASCULAR RING 1-like [Cucumis melo]) HSP 1 Score: 486.5 bits (1251), Expect = 5.8e-134 Identity = 263/265 (99.25%), Postives = 263/265 (99.25%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. NCBI nr
Match: XP_022157585.1 (protein CONTINUOUS VASCULAR RING 1-like [Momordica charantia]) HSP 1 Score: 462.2 bits (1188), Expect = 1.2e-126 Identity = 249/267 (93.26%), Postives = 255/267 (95.51%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. NCBI nr
Match: XP_022999521.1 (protein CONTINUOUS VASCULAR RING 1-like [Cucurbita maxima] >XP_023546482.1 protein CONTINUOUS VASCULAR RING 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 456.4 bits (1173), Expect = 6.4e-125 Identity = 239/262 (91.22%), Postives = 245/262 (93.51%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. NCBI nr
Match: XP_022946565.1 (protein CONTINUOUS VASCULAR RING 1-like [Cucurbita moschata]) HSP 1 Score: 451.8 bits (1161), Expect = 1.6e-123 Identity = 239/263 (90.87%), Postives = 245/263 (93.16%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. TAIR10
Match: AT2G20120.1 (Protein of unknown function (DUF502)) HSP 1 Score: 389.4 bits (999), Expect = 1.7e-108 Identity = 211/265 (79.62%), Postives = 229/265 (86.42%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. TAIR10
Match: AT2G20130.1 (like COV 1) HSP 1 Score: 372.9 bits (956), Expect = 1.7e-103 Identity = 202/252 (80.16%), Postives = 220/252 (87.30%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. TAIR10
Match: AT2G18460.1 (like COV 3) HSP 1 Score: 350.9 bits (899), Expect = 6.9e-97 Identity = 174/248 (70.16%), Postives = 203/248 (81.85%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. TAIR10
Match: AT1G43130.1 (like COV 2) HSP 1 Score: 310.5 bits (794), Expect = 1.0e-84 Identity = 148/196 (75.51%), Postives = 177/196 (90.31%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. Swiss-Prot
Match: sp|F4IUE7|COV1_ARATH (Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana OX=3702 GN=COV1 PE=1 SV=2) HSP 1 Score: 390.2 bits (1001), Expect = 1.8e-107 Identity = 211/265 (79.62%), Postives = 229/265 (86.42%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. Swiss-Prot
Match: sp|Q8VY49|LCV1_ARATH (Protein LIKE COV 1 OS=Arabidopsis thaliana OX=3702 GN=LCV1 PE=2 SV=1) HSP 1 Score: 372.9 bits (956), Expect = 3.1e-102 Identity = 202/252 (80.16%), Postives = 220/252 (87.30%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. Swiss-Prot
Match: sp|F4IQJ6|LCV3_ARATH (Protein LIKE COV 3 OS=Arabidopsis thaliana OX=3702 GN=LCV3 PE=2 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 1.2e-95 Identity = 174/248 (70.16%), Postives = 203/248 (81.85%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. Swiss-Prot
Match: sp|Q9C8C1|LCV2_ARATH (Protein LIKE COV 2 OS=Arabidopsis thaliana OX=3702 GN=LCV2 PE=2 SV=1) HSP 1 Score: 310.5 bits (794), Expect = 1.9e-83 Identity = 148/196 (75.51%), Postives = 177/196 (90.31%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. TrEMBL
Match: tr|A0A0A0LHX6|A0A0A0LHX6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004150 PE=4 SV=1) HSP 1 Score: 491.1 bits (1263), Expect = 1.6e-135 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. TrEMBL
Match: tr|A0A1S3C7R2|A0A1S3C7R2_CUCME (protein CONTINUOUS VASCULAR RING 1-like OS=Cucumis melo OX=3656 GN=LOC103497810 PE=4 SV=1) HSP 1 Score: 486.5 bits (1251), Expect = 3.8e-134 Identity = 263/265 (99.25%), Postives = 263/265 (99.25%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. TrEMBL
Match: tr|D7TBM3|D7TBM3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g03780 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 1.8e-120 Identity = 226/265 (85.28%), Postives = 242/265 (91.32%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. TrEMBL
Match: tr|A0A2C9UB23|A0A2C9UB23_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G114500 PE=4 SV=1) HSP 1 Score: 429.1 bits (1102), Expect = 7.3e-117 Identity = 228/267 (85.39%), Postives = 248/267 (92.88%), Query Frame = 0
BLAST of CsaV3_2G002220 vs. TrEMBL
Match: tr|M5VRM0|M5VRM0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G232900 PE=4 SV=1) HSP 1 Score: 427.9 bits (1099), Expect = 1.6e-116 Identity = 223/263 (84.79%), Postives = 237/263 (90.11%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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