CsaV3_2G001900 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGCCATGCATCACGACACGTCGTCCGACCTCAAAGTTGTTGCAAGCAAACTGAAGGATGTCTTGGAGGTTAAACAAAAACTGCTCACCCTATGCCTTTTGCTTGACTTTCAGATATCCAATACCTCCTTGAAAGCAAGAAAAAATCATAGTGGAGCTCTGTGACGTAGTCACAACACGGGGCGCCCGTCTCTCTGCTGCTGGTATCTTCGGCATCCTGAAAAAACTGGGAAGAGACACCGTCCGGATTGGGGAGAAGCAGAAGTCTGTTGTAGCATTGGATGGAGGGTTGTATGAGCACTACACAAAATTCAGAACTACCATGGAAAACACACTGAAGGAGCTACTTGGAGATGAGGTAGCTGCAAACGTCTTCGTCGAGCATTCAAACAATGGTTCTGGCATAGGAGCTGCACTATTTGCAGCCTCTCACTCTCAATATCTCGAGGTAGATGAGCCCCAAGGAAGAAAAAGGATCAAATTACAGATAGTATATTGTGGAGTAGCAGAAGCTTTGATTTTGTATTGA ATGTCTGCCATGCATCACGACACGTCGTCCGACCTCAAAGTTGTTGCAAGCAAACTGAAGGATGTCTTGGAGCAAGAAAAAATCATAGTGGAGCTCTGTGACGTAGTCACAACACGGGGCGCCCGTCTCTCTGCTGCTGGTATCTTCGGCATCCTGAAAAAACTGGGAAGAGACACCGTCCGGATTGGGGAGAAGCAGAAGTCTGTTGTAGCATTGGATGGAGGGTTGTATGAGCACTACACAAAATTCAGAACTACCATGGAAAACACACTGAAGGAGCTACTTGGAGATGAGGTAGCTGCAAACGTCTTCGTCGAGCATTCAAACAATGGTTCTGGCATAGGAGCTGCACTATTTGCAGCCTCTCACTCTCAATATCTCGAGGTAGATGAGCCCCAAGGAAGAAAAAGGATCAAATTACAGATAGTATATTGTGGAGTAGCAGAAGCTTTGATTTTGTATTGA ATGTCTGCCATGCATCACGACACGTCGTCCGACCTCAAAGTTGTTGCAAGCAAACTGAAGGATGTCTTGGAGCAAGAAAAAATCATAGTGGAGCTCTGTGACGTAGTCACAACACGGGGCGCCCGTCTCTCTGCTGCTGGTATCTTCGGCATCCTGAAAAAACTGGGAAGAGACACCGTCCGGATTGGGGAGAAGCAGAAGTCTGTTGTAGCATTGGATGGAGGGTTGTATGAGCACTACACAAAATTCAGAACTACCATGGAAAACACACTGAAGGAGCTACTTGGAGATGAGGTAGCTGCAAACGTCTTCGTCGAGCATTCAAACAATGGTTCTGGCATAGGAGCTGCACTATTTGCAGCCTCTCACTCTCAATATCTCGAGGTAGATGAGCCCCAAGGAAGAAAAAGGATCAAATTACAGATAGTATATTGTGGAGTAGCAGAAGCTTTGATTTTGTATTGA MSAMHHDTSSDLKVVASKLKDVLEQEKIIVELCDVVTTRGARLSAAGIFGILKKLGRDTVRIGEKQKSVVALDGGLYEHYTKFRTTMENTLKELLGDEVAANVFVEHSNNGSGIGAALFAASHSQYLEVDEPQGRKRIKLQIVYCGVAEALILY
BLAST of CsaV3_2G001900 vs. NCBI nr
Match: KGN60580.1 (hypothetical protein Csa_2G000870 [Cucumis sativus]) HSP 1 Score: 299.3 bits (765), Expect = 7.6e-78 Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. NCBI nr
Match: XP_008458849.1 (PREDICTED: hexokinase-1 isoform X1 [Cucumis melo]) HSP 1 Score: 234.6 bits (597), Expect = 2.3e-58 Identity = 122/139 (87.77%), Postives = 126/139 (90.65%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. NCBI nr
Match: XP_008458864.1 (PREDICTED: hexokinase-1 isoform X2 [Cucumis melo]) HSP 1 Score: 234.6 bits (597), Expect = 2.3e-58 Identity = 122/139 (87.77%), Postives = 126/139 (90.65%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. NCBI nr
Match: XP_008458873.1 (PREDICTED: hexokinase-1 isoform X3 [Cucumis melo] >XP_008458879.1 PREDICTED: hexokinase-1 isoform X3 [Cucumis melo] >XP_008458886.1 PREDICTED: hexokinase-1 isoform X3 [Cucumis melo] >XP_008458893.1 PREDICTED: hexokinase-1 isoform X3 [Cucumis melo] >XP_008458902.1 PREDICTED: hexokinase-1 isoform X3 [Cucumis melo] >XP_008458909.1 PREDICTED: hexokinase-1 isoform X3 [Cucumis melo] >XP_008458916.1 PREDICTED: hexokinase-1 isoform X3 [Cucumis melo] >XP_008458936.1 PREDICTED: hexokinase-1 isoform X3 [Cucumis melo]) HSP 1 Score: 234.6 bits (597), Expect = 2.3e-58 Identity = 122/139 (87.77%), Postives = 126/139 (90.65%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. NCBI nr
Match: ACJ04704.1 (hexokinase 1 [Cucumis melo]) HSP 1 Score: 233.0 bits (593), Expect = 6.7e-58 Identity = 121/139 (87.05%), Postives = 126/139 (90.65%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. TAIR10
Match: AT4G29130.1 (hexokinase 1) HSP 1 Score: 177.2 bits (448), Expect = 7.9e-45 Identity = 88/135 (65.19%), Postives = 109/135 (80.74%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. TAIR10
Match: AT2G19860.1 (hexokinase 2) HSP 1 Score: 176.8 bits (447), Expect = 1.0e-44 Identity = 87/138 (63.04%), Postives = 113/138 (81.88%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. TAIR10
Match: AT1G47840.1 (hexokinase 3) HSP 1 Score: 110.9 bits (276), Expect = 7.0e-25 Identity = 58/129 (44.96%), Postives = 88/129 (68.22%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. TAIR10
Match: AT3G20040.1 (Hexokinase) HSP 1 Score: 110.2 bits (274), Expect = 1.2e-24 Identity = 62/134 (46.27%), Postives = 92/134 (68.66%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. TAIR10
Match: AT4G37840.1 (hexokinase-like 3) HSP 1 Score: 108.6 bits (270), Expect = 3.5e-24 Identity = 58/128 (45.31%), Postives = 84/128 (65.62%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. Swiss-Prot
Match: sp|Q9SEK3|HXK1_SPIOL (Hexokinase-1 OS=Spinacia oleracea OX=3562 GN=HXK1 PE=2 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 1.1e-48 Identity = 99/138 (71.74%), Postives = 115/138 (83.33%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. Swiss-Prot
Match: sp|Q9SEK2|HXK1_TOBAC (Hexokinase-1 OS=Nicotiana tabacum OX=4097 GN=HXK1 PE=2 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 2.9e-44 Identity = 88/135 (65.19%), Postives = 110/135 (81.48%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. Swiss-Prot
Match: sp|Q42525|HXK1_ARATH (Hexokinase-1 OS=Arabidopsis thaliana OX=3702 GN=HXK1 PE=1 SV=2) HSP 1 Score: 177.2 bits (448), Expect = 1.4e-43 Identity = 88/135 (65.19%), Postives = 109/135 (80.74%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. Swiss-Prot
Match: sp|P93834|HXK2_ARATH (Hexokinase-2 OS=Arabidopsis thaliana OX=3702 GN=HXK2 PE=1 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 1.9e-43 Identity = 87/138 (63.04%), Postives = 113/138 (81.88%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. Swiss-Prot
Match: sp|O64390|HXK1_SOLTU (Hexokinase-1 OS=Solanum tuberosum OX=4113 GN=HXK1 PE=1 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 1.3e-41 Identity = 82/135 (60.74%), Postives = 106/135 (78.52%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. TrEMBL
Match: tr|A0A0A0LEY7|A0A0A0LEY7_CUCSA (Phosphotransferase OS=Cucumis sativus OX=3659 GN=Csa_2G000870 PE=3 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 5.1e-78 Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. TrEMBL
Match: tr|A0A1S3C8Z7|A0A1S3C8Z7_CUCME (Phosphotransferase OS=Cucumis melo OX=3656 GN=LOC103498127 PE=3 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.5e-58 Identity = 122/139 (87.77%), Postives = 126/139 (90.65%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. TrEMBL
Match: tr|A0A1S3C8E1|A0A1S3C8E1_CUCME (Phosphotransferase OS=Cucumis melo OX=3656 GN=LOC103498127 PE=3 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.5e-58 Identity = 122/139 (87.77%), Postives = 126/139 (90.65%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. TrEMBL
Match: tr|A0A1S3C8X8|A0A1S3C8X8_CUCME (Phosphotransferase OS=Cucumis melo OX=3656 GN=LOC103498127 PE=3 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.5e-58 Identity = 122/139 (87.77%), Postives = 126/139 (90.65%), Query Frame = 0
BLAST of CsaV3_2G001900 vs. TrEMBL
Match: tr|B6V3C0|B6V3C0_CUCME (Phosphotransferase OS=Cucumis melo OX=3656 PE=2 SV=1) HSP 1 Score: 233.0 bits (593), Expect = 4.5e-58 Identity = 121/139 (87.05%), Postives = 126/139 (90.65%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |