CsaV3_2G001480 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CAGAGACAAAAGTAAAGATGATAAGCTTTTCATGCGTCGACACCTAAGTGGGTCTCAGAAATTTAGAAAAATAAAAGTCCAATGGGCTTTCCTAAGAACAAATGATGACTTAGTTCTGGGCTGGAAAGCAATGTTTACTTGTTTTATCTTTCTGGGCCGTAGGCCCATCCCATGGTGCTTTCCAATTGTTGTTCATAGTTTATTGGTGAACGTTGGTTTGGAGGCATAATAGAGAGTGAGAGAAAACCAAAACTTTGGCGCCGCGGCATTATTTGGGGTAGTTATTGATCAACAAAACTCCGAAGCTGACCCACTCTTCACTTCTTCCTTCTCTCACCGCCAACCATTTTCCATCCTCAATTTCTCCAACTCCAATTCTCTGCTTTCATGTCAATTAACCATAACAATTCTTCCATTTCCCTCCTTCCCCTTCTTCTTCTTTTTTTCCTTCAATCATGCCCGGAACTATCAGACTTTCAGGTTATTTTCTCCCATTTCTTATCTTTATGCCATTACTTTTCCTTCTTCTTCTTCATCCTTCATTTCCATTTCTTTCAGTTCTGGAGTTCATCGACCTTCCCGAGCTACTGCCTTCTCAAATTTCGATTAAGGGTACGTAAATCGGCTGCTTGTTTGTTTGTTTGTTTTTTGTTGTTGTATTGATTCTGAAATGGGTTTCGTTTTACTTCAGTTTCCATGGGGAAAAGACATTACGAAACTTCGGATAAAGGAGATTTCTCATTGTAATGAAATATGTCCTCTGTTATTTGTGATCTTTGTCTTCTTCCTGTTCTCAATTCTCATTATTGTATTCTTGTTGGTTTATTTATACAGTCCATTGACAACTCTGCGAGATGATGTGATTCTTATAGTTCAGGATGCTGGGGGGAACGAGATATCACGTGCAGGTTTGTTCTAGGAATTTGGTGGTGTTGTCTGATTTAGTTAATTTATGAGGCTGATTGAAAATGGTTTTGTTTTGGGGAAGGTGTTCAGGCGAAATCAATAGTTGAGAAGGGTTATTGGGATGATCTTTTTCCTCTTGAAGGAGGTGGCCATGTGCATTTGCAGTTCCAGTTTGCTCTTAGTGAAGATGACCGCAGTCGAATTCGAATGATGGTACTCTTTTCGAACCTTATTTTTCTCTTCAACAATGTCGCTTTTTTTTTTTTTTTACTGAATTCAAGTTGGTTTGTTGATAGTCATCCCTATCGTTTGAGTTGTTTTATTGTAATTACTAATTTTCGTTTCACTCACTTTGGATCTTTTTGTTTGGCATTTTGAGTTCTTGCGATAATAACTTCAATCTCATTTCTACTTTTTTTTATTATTATTGTAGAGAGAGACCGCTTTGAGAAGAAAACAAGTTGAGCGTCAAGATAGAAATCTCAGAAGCTCAGGAAGCAACATTGGATCATCTTTTTACCGCAACCCTGAGCTCTCAGGTCAGACCATGTTCTTTTTTCCTTATTTTTTTTTCCACCTTTTGAAATACTGAACAAGTCGAGAACCTGAATATTTCATGGTTAAGTATAGTAGGATTTTCTAGCTGTCGGGTTTTTTACATTGGTGTTTTCTGAAAGGTTATTTCTTGATTTTCTGAGTGCTCCGTCTTCTCAAGATTCACAAAAATGTCTTCTTCAAATTGGGGATCTAAGTGCTAAAGGACCAACTCAACAATCTACATCAACATCAACTGAAAATATCTCTGATGGGAAACCAATTACTGAAAGAACAAACAACGTTCAACTTGATCAGGTTCGACCACTTTCAGTTAGAATTAATGAATTTGTGGTTCAATTTCTTGCTGAAGTTTTAGTACCTGTTTTGATTTTGATGGGCGTTTTTGTTTGTTTTAGAATGATGCAAATAGAACTAAGCGTAATCCATCGACAACTCCTCAGTTGCAAGAAGTTGATGCTAATAAGCCAAAGGTAAATAACACTGTATTAGTTGAGAGGATAGAGAAACAATCACCTCATGCAAACAAACGTTCACCGACCATTCGTTCCGAAGAAAACTTGTTCAATTCTCAAGGCACAGAGTTATCAAATTCTTCATCAAAAGGTGAAGAGAAGACCGATGCTACGGGGACACCATCACGTAGGAGAGCTCCTGGGAATGTTAAAAAATTATTAAGTGCATTTGAAAGTAGCCTGACTCAGGTATATCCTGAATGATGCTTTATTGTATTTATATGATTCCATATGCTAATTGTTTGAATAAAATTTTGCTTCTTACATTAGGACACAAAACCTCGCATTAAACCTACCTTAAGAAATGCTCAACACAGTGTGGTAGAAAAGCAAACATCTTTGAGAGTTAATCAATCGAAGAAACCCTCCGAGGATAATACCAAGGCTATACTGTCACAAACACCAATCGGCCCTCCTCTTGCAGGTGAGTTGACCCATGACTTGGCAGATATCAAGCAAAAGGAACAGAAACGTAAATTCATTGAGGCTCGAGATGGGACTAAAATATTTGAAGACCCTGGGCAATCACTGAAGTTAAAGGGGAAAAAGAATCAAGTTGGCGGAGAAAATTTGATTGAGAAGGACAAAATGCACAAGGAGCGCGATGATATAGATGTAAAGAATGATGAATCTTATCAATCACGTGTTCAAGACAAGCAATTTCTTTCCAAAAGGTCTGGTGGCTGGATATTTCCAGATGAAAGAAGACGGTTATGTGTCACGACAAGTGATAATCAGATACAAGATCTGGCGGGGGGAGGGCGCATTAGCTATACATTCGTCCGTAAAGGGGAAATGAAGATTTCAACGGAAGAGGTAATCTTGGTTTAAACTTTTTTTTTTTTTCCTTTCTATCTAGTTTCTTAAAACTACGTAAAGGTGACCAAAAGTTAGATTCATTTGATCTTTATGAAGCAAATTAAACTTCCTTGACAATCTCGTAATTAACTCTCTCCATTTTAAATTCTTCTTGACAATCATGAAGATTGGGAACTTGCTGCAAAACTACAATCGTACTCTTTTAAGTTAGTTCATGCATCCATTATATGATGTGTACAAGCACACGATTGACATCTTTGCTCTTTAAATGGTCAAGGCCACGTGTGCAATAATGGAAGTCATATGATTGTGGTTTATTTTGAGACGATGGTTTATTAGTTTTATCTTGTTAATGACGTGTAATGGATGTGCATGCACTTACATCTACAGAGCAGAGGTACCTCAGAAACGAAGGCAAATGGGGGCAAGAGTGAACATCAAGAAATGATCAAACCAGATAGTTCAGATGATGTAAAACCGTTTGAAGGAGCACTTGCCAAGGTAATTTCAATCTTCTCTGAGGCACATTTAGATTTTTATCATCTAAATGGAGATTAATGACTGATTAAAAGTGACTAAGAGTTCAATTATTGTGTTTCACTAAGGGTTACAATATTATTGATGTTTTGCTCTCCCAAATTTTCTTGTTTAGGCCCTAAAAATTGCAATAATGGTTGGGTTCGGGACTCTTGTTCTCTTTACTAGACAAAGGAAAAAGAAGGTATGAAATAATTTTTGTTGCATTCCATGCTTCTTGAGCTTTTACTTTCCAACGCCTTGCAAGAAACATATGGTATAATCCCATCTTCGAAGAGAAGGAAAAGTAAAAACTGTTTGTGATCTGTCCCTTGTAAACCTGTTATTTGTGGCGTGAACATCCCCCCTATAAGGATGAAGTTATGCTTACAGAGCATCATAAAATTCACACAAAAGGCGTCCGTATACACATATCTGCTGGTTGGCTTCTAAAACTGTGATCTTTTTTCCTTCTGTTAGTAAAACTCTAGTTAAGGAGATGGTAGGATTATTAGTAAATATTAGTACGGTTATTTTACTTCAGCGTTCTTGAGTGTGTTTTTGCCGTGAGGTATCCTAATAATTACCAAGTCTGATTCACATGGCTTTACTTATGACCTTGCAGAAATAACCAGTTTAGTGAATGATCCATACAAATCCTAATCAAGGGGATGGAAGCTGTTACTTCCATAAACTGCAAACCAGTTTTTCTTCTCCCATTCTTTTTTCTTAACCATGTACGCAATATTAACAAATTTTGATCGTTCGTACAGAACATGTCATTGATGTATTTGCAATTTCTTTCTTCACTCTCATTGTATAAATTTTTTTCTTATCTTAAATAAATCAACTTTATATTCTGATGTTCAGTAACTTAGTTAAGAGAAGAAGACTGTGACCACCCATTTCATGAGAA ATGCCCGGAACTATCAGACTTTCAGTTCTGGAGTTCATCGACCTTCCCGAGCTACTGCCTTCTCAAATTTCGATTAAGGTTTCCATGGGGAAAAGACATTACGAAACTTCGGATAAAGGAGATTTCTCATTTCCATTGACAACTCTGCGAGATGATGTGATTCTTATAGTTCAGGATGCTGGGGGGAACGAGATATCACGTGCAGGTGTTCAGGCGAAATCAATAGTTGAGAAGGGTTATTGGGATGATCTTTTTCCTCTTGAAGGAGGTGGCCATGTGCATTTGCAGTTCCAGTTTGCTCTTAGTGAAGATGACCGCAGTCGAATTCGAATGATGAGAGAGACCGCTTTGAGAAGAAAACAAGTTGAGCGTCAAGATAGAAATCTCAGAAGCTCAGGAAGCAACATTGGATCATCTTTTTACCGCAACCCTGAGCTCTCAGATTCACAAAAATGTCTTCTTCAAATTGGGGATCTAAGTGCTAAAGGACCAACTCAACAATCTACATCAACATCAACTGAAAATATCTCTGATGGGAAACCAATTACTGAAAGAACAAACAACGTTCAACTTGATCAGAATGATGCAAATAGAACTAAGCGTAATCCATCGACAACTCCTCAGTTGCAAGAAGTTGATGCTAATAAGCCAAAGGTAAATAACACTGTATTAGTTGAGAGGATAGAGAAACAATCACCTCATGCAAACAAACGTTCACCGACCATTCGTTCCGAAGAAAACTTGTTCAATTCTCAAGGCACAGAGTTATCAAATTCTTCATCAAAAGGTGAAGAGAAGACCGATGCTACGGGGACACCATCACGTAGGAGAGCTCCTGGGAATGTTAAAAAATTATTAAGTGCATTTGAAAGTAGCCTGACTCAGGACACAAAACCTCGCATTAAACCTACCTTAAGAAATGCTCAACACAGTGTGGTAGAAAAGCAAACATCTTTGAGAGTTAATCAATCGAAGAAACCCTCCGAGGATAATACCAAGGCTATACTGTCACAAACACCAATCGGCCCTCCTCTTGCAGGTGAGTTGACCCATGACTTGGCAGATATCAAGCAAAAGGAACAGAAACGTAAATTCATTGAGGCTCGAGATGGGACTAAAATATTTGAAGACCCTGGGCAATCACTGAAGTTAAAGGGGAAAAAGAATCAAGTTGGCGGAGAAAATTTGATTGAGAAGGACAAAATGCACAAGGAGCGCGATGATATAGATGTAAAGAATGATGAATCTTATCAATCACGTGTTCAAGACAAGCAATTTCTTTCCAAAAGGTCTGGTGGCTGGATATTTCCAGATGAAAGAAGACGGTTATGTGTCACGACAAGTGATAATCAGATACAAGATCTGGCGGGGGGAGGGCGCATTAGCTATACATTCGTCCGTAAAGGGGAAATGAAGATTTCAACGGAAGAGAGCAGAGGTACCTCAGAAACGAAGGCAAATGGGGGCAAGAGTGAACATCAAGAAATGATCAAACCAGATAGTTCAGATGATGTAAAACCGTTTGAAGGAGCACTTGCCAAGGCCCTAAAAATTGCAATAATGGTTGGGTTCGGGACTCTTGTTCTCTTTACTAGACAAAGGAAAAAGAAGAAATAA ATGCCCGGAACTATCAGACTTTCAGTTCTGGAGTTCATCGACCTTCCCGAGCTACTGCCTTCTCAAATTTCGATTAAGGTTTCCATGGGGAAAAGACATTACGAAACTTCGGATAAAGGAGATTTCTCATTTCCATTGACAACTCTGCGAGATGATGTGATTCTTATAGTTCAGGATGCTGGGGGGAACGAGATATCACGTGCAGGTGTTCAGGCGAAATCAATAGTTGAGAAGGGTTATTGGGATGATCTTTTTCCTCTTGAAGGAGGTGGCCATGTGCATTTGCAGTTCCAGTTTGCTCTTAGTGAAGATGACCGCAGTCGAATTCGAATGATGAGAGAGACCGCTTTGAGAAGAAAACAAGTTGAGCGTCAAGATAGAAATCTCAGAAGCTCAGGAAGCAACATTGGATCATCTTTTTACCGCAACCCTGAGCTCTCAGATTCACAAAAATGTCTTCTTCAAATTGGGGATCTAAGTGCTAAAGGACCAACTCAACAATCTACATCAACATCAACTGAAAATATCTCTGATGGGAAACCAATTACTGAAAGAACAAACAACGTTCAACTTGATCAGAATGATGCAAATAGAACTAAGCGTAATCCATCGACAACTCCTCAGTTGCAAGAAGTTGATGCTAATAAGCCAAAGGTAAATAACACTGTATTAGTTGAGAGGATAGAGAAACAATCACCTCATGCAAACAAACGTTCACCGACCATTCGTTCCGAAGAAAACTTGTTCAATTCTCAAGGCACAGAGTTATCAAATTCTTCATCAAAAGGTGAAGAGAAGACCGATGCTACGGGGACACCATCACGTAGGAGAGCTCCTGGGAATGTTAAAAAATTATTAAGTGCATTTGAAAGTAGCCTGACTCAGGACACAAAACCTCGCATTAAACCTACCTTAAGAAATGCTCAACACAGTGTGGTAGAAAAGCAAACATCTTTGAGAGTTAATCAATCGAAGAAACCCTCCGAGGATAATACCAAGGCTATACTGTCACAAACACCAATCGGCCCTCCTCTTGCAGGTGAGTTGACCCATGACTTGGCAGATATCAAGCAAAAGGAACAGAAACGTAAATTCATTGAGGCTCGAGATGGGACTAAAATATTTGAAGACCCTGGGCAATCACTGAAGTTAAAGGGGAAAAAGAATCAAGTTGGCGGAGAAAATTTGATTGAGAAGGACAAAATGCACAAGGAGCGCGATGATATAGATGTAAAGAATGATGAATCTTATCAATCACGTGTTCAAGACAAGCAATTTCTTTCCAAAAGGTCTGGTGGCTGGATATTTCCAGATGAAAGAAGACGGTTATGTGTCACGACAAGTGATAATCAGATACAAGATCTGGCGGGGGGAGGGCGCATTAGCTATACATTCGTCCGTAAAGGGGAAATGAAGATTTCAACGGAAGAGAGCAGAGGTACCTCAGAAACGAAGGCAAATGGGGGCAAGAGTGAACATCAAGAAATGATCAAACCAGATAGTTCAGATGATGTAAAACCGTTTGAAGGAGCACTTGCCAAGGCCCTAAAAATTGCAATAATGGTTGGGTTCGGGACTCTTGTTCTCTTTACTAGACAAAGGAAAAAGAAGAAATAA MPGTIRLSVLEFIDLPELLPSQISIKVSMGKRHYETSDKGDFSFPLTTLRDDVILIVQDAGGNEISRAGVQAKSIVEKGYWDDLFPLEGGGHVHLQFQFALSEDDRSRIRMMRETALRRKQVERQDRNLRSSGSNIGSSFYRNPELSDSQKCLLQIGDLSAKGPTQQSTSTSTENISDGKPITERTNNVQLDQNDANRTKRNPSTTPQLQEVDANKPKVNNTVLVERIEKQSPHANKRSPTIRSEENLFNSQGTELSNSSSKGEEKTDATGTPSRRRAPGNVKKLLSAFESSLTQDTKPRIKPTLRNAQHSVVEKQTSLRVNQSKKPSEDNTKAILSQTPIGPPLAGELTHDLADIKQKEQKRKFIEARDGTKIFEDPGQSLKLKGKKNQVGGENLIEKDKMHKERDDIDVKNDESYQSRVQDKQFLSKRSGGWIFPDERRRLCVTTSDNQIQDLAGGGRISYTFVRKGEMKISTEESRGTSETKANGGKSEHQEMIKPDSSDDVKPFEGALAKALKIAIMVGFGTLVLFTRQRKKKK
BLAST of CsaV3_2G001480 vs. NCBI nr
Match: XP_011648608.1 (PREDICTED: uncharacterized protein LOC101205190 isoform X2 [Cucumis sativus] >KGN60539.1 hypothetical protein Csa_2G000470 [Cucumis sativus]) HSP 1 Score: 1029.2 bits (2660), Expect = 4.9e-297 Identity = 538/538 (100.00%), Postives = 538/538 (100.00%), Query Frame = 0
BLAST of CsaV3_2G001480 vs. NCBI nr
Match: XP_011648607.1 (PREDICTED: uncharacterized protein LOC101205190 isoform X1 [Cucumis sativus]) HSP 1 Score: 1016.5 bits (2627), Expect = 3.3e-293 Identity = 532/532 (100.00%), Postives = 532/532 (100.00%), Query Frame = 0
BLAST of CsaV3_2G001480 vs. NCBI nr
Match: XP_008459318.1 (PREDICTED: uncharacterized protein LOC103498484 isoform X2 [Cucumis melo]) HSP 1 Score: 924.1 bits (2387), Expect = 2.2e-265 Identity = 490/557 (87.97%), Postives = 507/557 (91.02%), Query Frame = 0
BLAST of CsaV3_2G001480 vs. NCBI nr
Match: XP_016901125.1 (PREDICTED: uncharacterized protein LOC103498484 isoform X1 [Cucumis melo]) HSP 1 Score: 912.5 bits (2357), Expect = 6.6e-262 Identity = 485/551 (88.02%), Postives = 501/551 (90.93%), Query Frame = 0
BLAST of CsaV3_2G001480 vs. NCBI nr
Match: XP_011648609.1 (PREDICTED: uncharacterized protein LOC101205190 isoform X3 [Cucumis sativus] >XP_011648611.1 PREDICTED: uncharacterized protein LOC101205190 isoform X3 [Cucumis sativus]) HSP 1 Score: 895.2 bits (2312), Expect = 1.1e-256 Identity = 470/473 (99.37%), Postives = 471/473 (99.58%), Query Frame = 0
BLAST of CsaV3_2G001480 vs. TAIR10
Match: AT5G56850.1 (unknown protein) HSP 1 Score: 113.2 bits (282), Expect = 4.9e-25 Identity = 152/594 (25.59%), Postives = 244/594 (41.08%), Query Frame = 0
BLAST of CsaV3_2G001480 vs. TrEMBL
Match: tr|A0A0A0LHS4|A0A0A0LHS4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000470 PE=4 SV=1) HSP 1 Score: 1029.2 bits (2660), Expect = 3.2e-297 Identity = 538/538 (100.00%), Postives = 538/538 (100.00%), Query Frame = 0
BLAST of CsaV3_2G001480 vs. TrEMBL
Match: tr|A0A1S3C9Z4|A0A1S3C9Z4_CUCME (uncharacterized protein LOC103498484 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498484 PE=4 SV=1) HSP 1 Score: 924.1 bits (2387), Expect = 1.5e-265 Identity = 490/557 (87.97%), Postives = 507/557 (91.02%), Query Frame = 0
BLAST of CsaV3_2G001480 vs. TrEMBL
Match: tr|A0A1S4DZH1|A0A1S4DZH1_CUCME (uncharacterized protein LOC103498484 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498484 PE=4 SV=1) HSP 1 Score: 912.5 bits (2357), Expect = 4.4e-262 Identity = 485/551 (88.02%), Postives = 501/551 (90.93%), Query Frame = 0
BLAST of CsaV3_2G001480 vs. TrEMBL
Match: tr|A0A1S4DYS5|A0A1S4DYS5_CUCME (uncharacterized protein LOC103498484 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498484 PE=4 SV=1) HSP 1 Score: 792.0 bits (2044), Expect = 8.6e-226 Identity = 424/491 (86.35%), Postives = 440/491 (89.61%), Query Frame = 0
BLAST of CsaV3_2G001480 vs. TrEMBL
Match: tr|A0A2N9EPK2|A0A2N9EPK2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4503 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 4.6e-62 Identity = 209/606 (34.49%), Postives = 296/606 (48.84%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |