CsaV3_1G045990 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACCACAACAAAATGAAATGGACGGCTTGTGAGTTCTTCTACAAGACACATGAGAAAATGCTCAACGATGCCGAAGAATGGCTTAAGAAAACCTCCGAGTCTTGTTCTGCTGTCGCAGTTCTGGTCGCGACTGTCGTCTTTGCCGCTGCCTACACTGTCCCTGGCGGACTCAATAGCAAGACTGGCTCCCCTGTTCTCCTTACTGAACCTATATATATTGTGTTCACAATCATGGACATTATCGCACTAGCCACAGCACTAACGTCAGTGGTTCTGTTTCTTTCCATTCTAACATCTTCGTTTAAGATGGAAGATTTTCTACACACATTGCCGATGAAACTCTCGATTGGATTCCAGTTGTTGTTTTTCTCAGTGGCGAGTACAATGATGGCATTCGCATTGACGATTGTGTTGACAATAAAATCGAAGGAGATGAAGTGGACGATGAGTTTGTTATATATTGCGACATTTCTTCCGGTGACCATGTTTATTATAATTCAACTACCTTTGTATGTGGAGTTGGTAAAAAATATATGGAGTTATCGCCAAAATATTTTCAAGTTTCTTCCCATGGGTTTTCTTGCTTTGTTTTGGGAACTTCCTTCCAAACTTTTGAGGTATAG ATGCACCACAACAAAATGAAATGGACGGCTTGTGAGTTCTTCTACAAGACACATGAGAAAATGCTCAACGATGCCGAAGAATGGCTTAAGAAAACCTCCGAGTCTTGTTCTGCTGTCGCAGTTCTGGTCGCGACTGTCGTCTTTGCCGCTGCCTACACTGTCCCTGGCGGACTCAATAGCAAGACTGGCTCCCCTGTTCTCCTTACTGAACCTATATATATTGTGTTCACAATCATGGACATTATCGCACTAGCCACAGCACTAACTGGCGAGTACAATGATGGCATTCGCATTGACGATTGTGTTGACAATAAAATCGAAGGAGATGAAGTGGACGATGAGTTTGTTATATATTGCGACATTTCTTCCGGTGACCATGTTTATTATAATTCAACTACCTTTGTATGTGGAGTTGGTAAAAAATATATGGAGTTATCGCCAAAATATTTTCAAGTTTCTTCCCATGGGTTTTCTTGCTTTGTTTTGGGAACTTCCTTCCAAACTTTTGAGGTATAG ATGCACCACAACAAAATGAAATGGACGGCTTGTGAGTTCTTCTACAAGACACATGAGAAAATGCTCAACGATGCCGAAGAATGGCTTAAGAAAACCTCCGAGTCTTGTTCTGCTGTCGCAGTTCTGGTCGCGACTGTCGTCTTTGCCGCTGCCTACACTGTCCCTGGCGGACTCAATAGCAAGACTGGCTCCCCTGTTCTCCTTACTGAACCTATATATATTGTGTTCACAATCATGGACATTATCGCACTAGCCACAGCACTAACTGGCGAGTACAATGATGGCATTCGCATTGACGATTGTGTTGACAATAAAATCGAAGGAGATGAAGTGGACGATGAGTTTGTTATATATTGCGACATTTCTTCCGGTGACCATGTTTATTATAATTCAACTACCTTTGTATGTGGAGTTGGTAAAAAATATATGGAGTTATCGCCAAAATATTTTCAAGTTTCTTCCCATGGGTTTTCTTGCTTTGTTTTGGGAACTTCCTTCCAAACTTTTGAGGTATAG MHHNKMKWTACEFFYKTHEKMLNDAEEWLKKTSESCSAVAVLVATVVFAAAYTVPGGLNSKTGSPVLLTEPIYIVFTIMDIIALATALTGEYNDGIRIDDCVDNKIEGDEVDDEFVIYCDISSGDHVYYNSTTFVCGVGKKYMELSPKYFQVSSHGFSCFVLGTSFQTFEV
BLAST of CsaV3_1G045990 vs. NCBI nr
Match: XP_011648561.1 (PREDICTED: uncharacterized protein LOC101203890 [Cucumis sativus]) HSP 1 Score: 160.2 bits (404), Expect = 6.1e-36 Identity = 78/89 (87.64%), Postives = 86/89 (96.63%), Query Frame = 0
BLAST of CsaV3_1G045990 vs. NCBI nr
Match: XP_008459132.1 (PREDICTED: protein ACCELERATED CELL DEATH 6-like [Cucumis melo]) HSP 1 Score: 159.5 bits (402), Expect = 1.0e-35 Identity = 80/89 (89.89%), Postives = 86/89 (96.63%), Query Frame = 0
BLAST of CsaV3_1G045990 vs. NCBI nr
Match: XP_022975228.1 (uncharacterized protein LOC111474320 [Cucurbita maxima]) HSP 1 Score: 155.6 bits (392), Expect = 1.5e-34 Identity = 78/89 (87.64%), Postives = 83/89 (93.26%), Query Frame = 0
BLAST of CsaV3_1G045990 vs. NCBI nr
Match: XP_022974704.1 (uncharacterized protein LOC111473443 [Cucurbita maxima]) HSP 1 Score: 154.5 bits (389), Expect = 3.4e-34 Identity = 77/89 (86.52%), Postives = 83/89 (93.26%), Query Frame = 0
BLAST of CsaV3_1G045990 vs. NCBI nr
Match: XP_022940456.1 (uncharacterized protein LOC111446049 [Cucurbita moschata]) HSP 1 Score: 153.7 bits (387), Expect = 5.8e-34 Identity = 77/89 (86.52%), Postives = 82/89 (92.13%), Query Frame = 0
BLAST of CsaV3_1G045990 vs. TAIR10
Match: AT5G04690.1 (Ankyrin repeat family protein) HSP 1 Score: 70.1 bits (170), Expect = 1.5e-12 Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = 0
BLAST of CsaV3_1G045990 vs. TAIR10
Match: AT5G04700.1 (Ankyrin repeat family protein) HSP 1 Score: 67.4 bits (163), Expect = 9.8e-12 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 0
BLAST of CsaV3_1G045990 vs. TAIR10
Match: AT5G04730.1 (Ankyrin-repeat containing protein) HSP 1 Score: 66.2 bits (160), Expect = 2.2e-11 Identity = 33/80 (41.25%), Postives = 49/80 (61.25%), Query Frame = 0
BLAST of CsaV3_1G045990 vs. TAIR10
Match: AT5G35810.1 (Ankyrin repeat family protein) HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10 Identity = 35/91 (38.46%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of CsaV3_1G045990 vs. TAIR10
Match: AT3G18670.1 (Ankyrin repeat family protein) HSP 1 Score: 60.8 bits (146), Expect = 9.2e-10 Identity = 31/83 (37.35%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of CsaV3_1G045990 vs. TrEMBL
Match: tr|A0A1S3C9K3|A0A1S3C9K3_CUCME (protein ACCELERATED CELL DEATH 6-like OS=Cucumis melo OX=3656 GN=LOC103498332 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 6.9e-36 Identity = 80/89 (89.89%), Postives = 86/89 (96.63%), Query Frame = 0
BLAST of CsaV3_1G045990 vs. TrEMBL
Match: tr|A0A0A0M0P8|A0A0A0M0P8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G701200 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 2.2e-26 Identity = 63/87 (72.41%), Postives = 77/87 (88.51%), Query Frame = 0
BLAST of CsaV3_1G045990 vs. TrEMBL
Match: tr|A0A2P5BTM1|A0A2P5BTM1_PARAD (Ankyrin repeat-containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_211490 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.8e-23 Identity = 56/81 (69.14%), Postives = 71/81 (87.65%), Query Frame = 0
BLAST of CsaV3_1G045990 vs. TrEMBL
Match: tr|A0A2K2AN07|A0A2K2AN07_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G003600v3 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 3.0e-23 Identity = 59/90 (65.56%), Postives = 75/90 (83.33%), Query Frame = 0
BLAST of CsaV3_1G045990 vs. TrEMBL
Match: tr|A0A2K1R4Z1|A0A2K1R4Z1_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_T156300v3 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 3.0e-23 Identity = 59/90 (65.56%), Postives = 75/90 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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