CsaV3_1G045880 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATATAAATTAATTATAATTATAAATATAGTTAAGAATAATCCATAAAATTAGAAACCCATAAATGTAGAAATAAGAAAAGTACATAAGCCATAAATTATTATCGTTCTCTCTCTTCCTCTCCGTCTCTAATTTTTCCTTGTTGAAGCACCAAAATCTCCCGCGAAGCATCCCATGGAAACGGTGGAGAAGAAATCTCAACCTCAAATAGATTCACAGAAATCAAAATCAGCTGAATTAGAATCAGAATTGGAAGCACCGGAATTGAGAAAGTTGGAATCATTTCTGAGATGGATTTGCATAATGGATCACTCAAATCTGTATCGCGCTTCGGTTTCCTGTATCATGTTCTTCGTGTTCGGAATCGCGGTTCCCATCGCATCGCACTTCGGTCTTTCATGCTCCGATTGCGATGAAGATCATCAAAGGCCTTTCCATGTGGTCGTTCAGCTCTCGCTTTCCGCCGTTGCTACGCTATCTTTCCTATGTCTCTCTCTGTGGCTCCGTGTCTTCGGACTGAATCGATTTCTGTTCCTGGATAAGCTGTGTGAAGCAAGCCCAAAGATTCGGGCTGAGTATTTCCGGCAATTACAGGTATCCTTCTTTCCTTTTCATTCAGTTTCAATCTTTCCTTTTCTTTCTTTCTTTTTTTTTTTTTTACTATATTTTGTTTTAAAGAGAGAAAAAAGAAAAAAAAAAAAAAAAAAAAGGAATTATTGTTATTGTTTTTCTTTTTCATTTTATGAGTCAATATTTCTTTGCCCGGTCCATAGAAATGCAAGTGGTTGCCAAATTGATATTAAATTAGTGGGTCTATTCATTTTATTTTTGAAAAAGGTTAAATTAATAATTAATGTTGGATGTAAAATAGCATAGATGATGTCTCACTACTCCATCAATTTTGTGTCAAAATCATTTTCAAAATTTAGGGGTTTATAGGTTTTTATTCCTTTGGGTTGGGGGGATTTTTTTCTTTTCATTTCTTCTCTCCACTCCAAATGGGTGGAAACTCCTTGAAATTTAGAGCTTTTATGGATTTTTTTAAAATTATATATTTTTTATTAATTGAGAAAACCACAGTACTAATAACTAAAATTTCATAAAATTCAATCCGTTAAATATATATTAAAATCATTAAACAAACACCATACTAATATGAGTTACTATAGATCTAACTCGAAAGAAAACATGAAAATTTAATAATTTATAATTAAAACTAATTCAATCCAACTTTTAAAATATGGTTGAAATAGTTGGAATTATTTGAATCATTTAAACACCTCGTACAGTAATTGAGCAATAGATAAATGAAAGGGTCGTACGGAGATAAGTGTAGTTTAATTACGCTAAAATTGATAAACTACATTAAATAGTAAGAAAATTAGAAACTCACCCGTAAGGCTATATGGTTTTAAAATTTGAACCAAATATAAATAAATTAGAAATACGGACCAAAAGTCTTCTTTTTCTTTTTTAAGAGTGGAAAATTAATTGTTAATGTTGATGTGAAATAAAACTTGAAATTTTTTAAAGATAATAAATAATTTATAATTTGAAAATTTGTTTCAAATACGTAATAAATCTTTTAAATTTCATATTTTAAAATTTTAAAAAATGAATCAATTTATTTTATGTAAGCAAAGTAGCCTTTCAATCTTATATTCAACGGATTTTTAAATTTTAATATATATATATATATATAGGTTAAATAATACTAAATTTACCATTTAGAAATTTTGACGTTTAAAATTTTATTGAGCATTCTTTTAGGAAAAAAAATAGAAATTAGATTGACATAAATATTAAACTTCAAACATTTTATTTTGAAAATTTTTCATAAATATAACGATCGGGTAAAATATTCACGGTCGTATAATAAAATGAAAAAGTCCATGAAATTGTCTATTTTTTAAATTACAGGCTTGCCCTTCCTTATGATCGTCTGCGATTTTCTTCTCTTTCTCTTTTGCCATGTTTTATTTTATCGTCATTTTCTCTTCTTCTGCCATTTGTGTAAAATATTTTACTTTGTCATTCCTTTTCATATTCTTTCTTGCAACTTTTTTTTTCATCGTCTTTTTTCTCATGTAATTTGTATCAAATATAAAAGATCATAAAAAAATCGTTGGAATGTTGGATTGTCAAATATAAAGTGTACAAAAAAAAAAACTAAATTTAAACCATCGTTTCTCAAATATAACGACCGTCTACCAACCCAAATACATGGTGTCACAAATCATAAAAAAATCATTTAGATTTGGGTATGATCAAATATACACTCAAATCTGTAAATTAATCGTTTGACATTTTTTTATATTTTTTATTGTAGGTATGTGTACTTCTTCCGTTTTCGAAACTATTTAAATACTTTGTGGGTGTGTTATAATTTTAAAAAAACCATTTTATAACTAATAAAATAATATTTAGTATCTTGATTATAAGAAAATTGTATTAAAATATGTAAGGACATAAATCTGTAGCTTTGTTGAATTATGCCTTAAAGAAGAAAAAAGATGGATTAAATTAATGCAGTAAACGCTAAATTTGATATTATAATTGCTATTATTGTTATTTTTAATTTGGTTTAATGAATAATTTATTTTATAAAAATAAAAATAGACAAGTCTGGACTATTTCTGATTTGACTATTTTTTATTTATTTTGTTAATACAATCACTTCCCATTATTCTACAAAATTGCTTTTCTTTTTCTAATGAAATTAGCTGGAATTTAAATAAATGTAGTATTTAATGCAATTTTTTGGAACCCCTTTTTTATGGATAACAAATAATGACAACAACCCCTTTTCAAAATGTACCGTTGCTGATGACTGTATAATTGCAGAAATCGATGAAGCTGATGTCCTTCTTCCTATTGCCATGTTTCATGGCAGAAGCAGGTTACAAAATCTGGTGGTACATTTCAGCAGCTAAAGAAATCCCATATTACACCAATAACATGTATATTAGCTACGTTACCTCTTGCACATTGGAGCTCTGCTCATGGCTTTACAGAACTTCCATCTTCTTCTTTGTCTGCATTTTCTTCCGCCTCATTTGCTGTCTCCAAATGATCAGACTTGAAGATTTCGCTTCTAGTTTTCGTAGCGAAACTGAGGTTGGCACCATCTTGATTCAGCATTTGGGGCTTAGAAGAACCTTCACTGTCATTAGCCATCGCTTTAGAGTCTTCATGTTGCTGTCTCTGATTTTGGTCACTGCTAGTCAGTTTATCTCTTTATTGATGACTACAAGATCTAAAGCTCATGCTAATCTCTCCAAGTCTGGACAACTTGCGGTAATACTATCTACTTTCTTTACCTTCTACTACTATCTACAAATTACTATACGTCTTTCTTGTCTCTAGAAATTTTAGTTTAAACCAAACGGTTATAGAAATGTGAATTTATACGTGTGTGAGTTGGAAACTAAATAGATGCAAACTTGAATGTTTATAAGCAAAGTGTTGTTTGATAAAGATTCTGTTTTAAAAATATATTCTTTTTCTTTCACACATTTCTTATCGATACATTTGGCTTTTTAGTAAACTAACAAAAAAATATAGACAGATTTTCAAAAACTACAATTGTTAGTTTTATAAAACATTGGTAGAAACTGTAAGTGAATAACAAAAGTGATAAACTCATGAACAAGAGTGATCTTTTAGAAGCTTTAATTTCAAATTCAACTTAGAAGGTGTTTTAAGGTGTTTTAATCAAGTATTGTTATGCTCTGAATTCTAATGTATTGAATGTTTATCATATTGAAGTTTTTTTTTGGATATGTGTAAGTCAGTAAAAGCTAAGAGTTTTGAGAACCATGCAGCTATGCTCCATCAGCTTGGTGACAGGTTTGTTCATATGCCTCCGCAGTGCTGCAAAGATCACCCATAAAGCTCAGTCCATCACATGCCTTGCTGCGAAGTGGCACGTCTCCGCCGTCATAAACACATTTGATGAGCTCGACACTGAGATGACCCCGACAGCGTCTTTTGTTCCCAACGTTGTTGAATCCAACTCTGATGATGAGGACGGCGATGAGGATGAGGACGACTTGGATGATGCCAAACTAATGCCAGTTTTTGCTCACACAATCTCATTCCAAAAGAGGCAGGCATTAGGTAAGTAATTTATAAACATGTATATCAAATCTATCAATCATTTACTTTAGTCTTTTAGTCATGAAAGGAAGGTATTTGTACTATTGTCATTTAACTTAATTTGGTAGGGTTTTTTTTTGTGCCAACAAGTGTTAATATTTTACTTTTGTATTGTATTTTGTACTAATTACGTTAAATTTTATATATATTCTAGGATAAAGAACGATATCCATATCTTAGTTGTTAGAAATTGACGTATTGTTGTGTCCTATTAGATTTGTATCATTGTGTAACCAAAGAAATATTTGTTTTGTTTTGTGCAGTGACATACTTGAGAAATAACAAAGCAGGAATAACAGTGTATGGATTCATGGTGGACAGAACATGGCTGAAATCCATTTTTGCCATTGAACTTGCTCTTTTCTTGTGGTTGCTCAACAAAACTGTTGGTGTTTCTTGAAGCTCTTGCCTTTTCATATATTAGATGAATTTTGTAGAGGAAATTAAATTGTTTATATTCTTAACATGTAGTGCTCTGTATGTATATTGAGTATTAAAAATGTATTGGAAACAAAAGGTTTATCTTTACAATAATGTGTGTAATATAAGTCTAACTAATATAGAAAGAGAGAGTAGTTAAGTTGATGATATCATTTATTTGGAAATGATAATGAGTTGGTTTGTTCTGATC ATGGAAACGGTGGAGAAGAAATCTCAACCTCAAATAGATTCACAGAAATCAAAATCAGCTGAATTAGAATCAGAATTGGAAGCACCGGAATTGAGAAAGTTGGAATCATTTCTGAGATGGATTTGCATAATGGATCACTCAAATCTGTATCGCGCTTCGGTTTCCTGTATCATGTTCTTCGTGTTCGGAATCGCGGTTCCCATCGCATCGCACTTCGGTCTTTCATGCTCCGATTGCGATGAAGATCATCAAAGGCCTTTCCATGTGGTCGTTCAGCTCTCGCTTTCCGCCGTTGCTACGCTATCTTTCCTATGTCTCTCTCTGTGGCTCCGTGTCTTCGGACTGAATCGATTTCTGTTCCTGGATAAGCTGTGTGAAGCAAGCCCAAAGATTCGGGCTGAGTATTTCCGGCAATTACAGAAATCGATGAAGCTGATGTCCTTCTTCCTATTGCCATGTTTCATGGCAGAAGCAGGTTACAAAATCTGGTGGTACATTTCAGCAGCTAAAGAAATCCCATATTACACCAATAACATACTTGAAGATTTCGCTTCTAGTTTTCGTAGCGAAACTGAGGTTGGCACCATCTTGATTCAGCATTTGGGGCTTAGAAGAACCTTCACTGTCATTAGCCATCGCTTTAGAGTCTTCATGTTGCTGTCTCTGATTTTGGTCACTGCTAGTCAGTTTATCTCTTTATTGATGACTACAAGATCTAAAGCTCATGCTAATCTCTCCAAGTCTGGACAACTTGCGCTATGCTCCATCAGCTTGGTGACAGGTTTGTTCATATGCCTCCGCAGTGCTGCAAAGATCACCCATAAAGCTCAGTCCATCACATGCCTTGCTGCGAAGTGGCACGTCTCCGCCGTCATAAACACATTTGATGAGCTCGACACTGAGATGACCCCGACAGCGTCTTTTGTTCCCAACGTTGTTGAATCCAACTCTGATGATGAGGACGGCGATGAGGATGAGGACGACTTGGATGATGCCAAACTAATGCCAGTTTTTGCTCACACAATCTCATTCCAAAAGAGGCAGGCATTAGTGACATACTTGAGAAATAACAAAGCAGGAATAACAGTGTATGGATTCATGGTGGACAGAACATGGCTGAAATCCATTTTTGCCATTGAACTTGCTCTTTTCTTGTGGTTGCTCAACAAAACTGTTGGTGTTTCTTGA ATGGAAACGGTGGAGAAGAAATCTCAACCTCAAATAGATTCACAGAAATCAAAATCAGCTGAATTAGAATCAGAATTGGAAGCACCGGAATTGAGAAAGTTGGAATCATTTCTGAGATGGATTTGCATAATGGATCACTCAAATCTGTATCGCGCTTCGGTTTCCTGTATCATGTTCTTCGTGTTCGGAATCGCGGTTCCCATCGCATCGCACTTCGGTCTTTCATGCTCCGATTGCGATGAAGATCATCAAAGGCCTTTCCATGTGGTCGTTCAGCTCTCGCTTTCCGCCGTTGCTACGCTATCTTTCCTATGTCTCTCTCTGTGGCTCCGTGTCTTCGGACTGAATCGATTTCTGTTCCTGGATAAGCTGTGTGAAGCAAGCCCAAAGATTCGGGCTGAGTATTTCCGGCAATTACAGAAATCGATGAAGCTGATGTCCTTCTTCCTATTGCCATGTTTCATGGCAGAAGCAGGTTACAAAATCTGGTGGTACATTTCAGCAGCTAAAGAAATCCCATATTACACCAATAACATACTTGAAGATTTCGCTTCTAGTTTTCGTAGCGAAACTGAGGTTGGCACCATCTTGATTCAGCATTTGGGGCTTAGAAGAACCTTCACTGTCATTAGCCATCGCTTTAGAGTCTTCATGTTGCTGTCTCTGATTTTGGTCACTGCTAGTCAGTTTATCTCTTTATTGATGACTACAAGATCTAAAGCTCATGCTAATCTCTCCAAGTCTGGACAACTTGCGCTATGCTCCATCAGCTTGGTGACAGGTTTGTTCATATGCCTCCGCAGTGCTGCAAAGATCACCCATAAAGCTCAGTCCATCACATGCCTTGCTGCGAAGTGGCACGTCTCCGCCGTCATAAACACATTTGATGAGCTCGACACTGAGATGACCCCGACAGCGTCTTTTGTTCCCAACGTTGTTGAATCCAACTCTGATGATGAGGACGGCGATGAGGATGAGGACGACTTGGATGATGCCAAACTAATGCCAGTTTTTGCTCACACAATCTCATTCCAAAAGAGGCAGGCATTAGTGACATACTTGAGAAATAACAAAGCAGGAATAACAGTGTATGGATTCATGGTGGACAGAACATGGCTGAAATCCATTTTTGCCATTGAACTTGCTCTTTTCTTGTGGTTGCTCAACAAAACTGTTGGTGTTTCTTGA METVEKKSQPQIDSQKSKSAELESELEAPELRKLESFLRWICIMDHSNLYRASVSCIMFFVFGIAVPIASHFGLSCSDCDEDHQRPFHVVVQLSLSAVATLSFLCLSLWLRVFGLNRFLFLDKLCEASPKIRAEYFRQLQKSMKLMSFFLLPCFMAEAGYKIWWYISAAKEIPYYTNNILEDFASSFRSETEVGTILIQHLGLRRTFTVISHRFRVFMLLSLILVTASQFISLLMTTRSKAHANLSKSGQLALCSISLVTGLFICLRSAAKITHKAQSITCLAAKWHVSAVINTFDELDTEMTPTASFVPNVVESNSDDEDGDEDEDDLDDAKLMPVFAHTISFQKRQALVTYLRNNKAGITVYGFMVDRTWLKSIFAIELALFLWLLNKTVGVS
BLAST of CsaV3_1G045880 vs. NCBI nr
Match: XP_011660297.1 (PREDICTED: uncharacterized protein LOC101203162 [Cucumis sativus] >KGN66826.1 hypothetical protein Csa_1G699550 [Cucumis sativus]) HSP 1 Score: 713.0 bits (1839), Expect = 5.7e-202 Identity = 394/434 (90.78%), Postives = 395/434 (91.01%), Query Frame = 0
BLAST of CsaV3_1G045880 vs. NCBI nr
Match: XP_008458982.1 (PREDICTED: uncharacterized protein LOC103498231 [Cucumis melo]) HSP 1 Score: 628.2 bits (1619), Expect = 1.8e-176 Identity = 332/405 (81.98%), Postives = 344/405 (84.94%), Query Frame = 0
BLAST of CsaV3_1G045880 vs. NCBI nr
Match: XP_023519923.1 (uncharacterized protein LOC111783244 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 569.7 bits (1467), Expect = 7.7e-159 Identity = 315/434 (72.58%), Postives = 352/434 (81.11%), Query Frame = 0
BLAST of CsaV3_1G045880 vs. NCBI nr
Match: XP_022927047.1 (uncharacterized protein LOC111433990 [Cucurbita moschata]) HSP 1 Score: 565.5 bits (1456), Expect = 1.5e-157 Identity = 314/434 (72.35%), Postives = 352/434 (81.11%), Query Frame = 0
BLAST of CsaV3_1G045880 vs. NCBI nr
Match: XP_023001582.1 (uncharacterized protein LOC111495669 [Cucurbita maxima]) HSP 1 Score: 551.6 bits (1420), Expect = 2.2e-153 Identity = 290/407 (71.25%), Postives = 326/407 (80.10%), Query Frame = 0
BLAST of CsaV3_1G045880 vs. TAIR10
Match: AT4G22270.1 (Protein of unknown function (DUF3537)) HSP 1 Score: 354.8 bits (909), Expect = 7.1e-98 Identity = 198/401 (49.38%), Postives = 256/401 (63.84%), Query Frame = 0
BLAST of CsaV3_1G045880 vs. TAIR10
Match: AT3G20300.1 (Protein of unknown function (DUF3537)) HSP 1 Score: 345.1 bits (884), Expect = 5.6e-95 Identity = 193/413 (46.73%), Postives = 260/413 (62.95%), Query Frame = 0
BLAST of CsaV3_1G045880 vs. TAIR10
Match: AT1G50630.1 (Protein of unknown function (DUF3537)) HSP 1 Score: 330.9 bits (847), Expect = 1.1e-90 Identity = 187/421 (44.42%), Postives = 253/421 (60.10%), Query Frame = 0
BLAST of CsaV3_1G045880 vs. TAIR10
Match: AT4G03820.2 (Protein of unknown function (DUF3537)) HSP 1 Score: 308.9 bits (790), Expect = 4.5e-84 Identity = 196/435 (45.06%), Postives = 269/435 (61.84%), Query Frame = 0
BLAST of CsaV3_1G045880 vs. TAIR10
Match: AT2G21080.1 (unknown protein) HSP 1 Score: 174.9 bits (442), Expect = 1.0e-43 Identity = 120/419 (28.64%), Postives = 203/419 (48.45%), Query Frame = 0
BLAST of CsaV3_1G045880 vs. TrEMBL
Match: tr|A0A0A0M3M6|A0A0A0M3M6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699550 PE=4 SV=1) HSP 1 Score: 713.0 bits (1839), Expect = 3.7e-202 Identity = 394/434 (90.78%), Postives = 395/434 (91.01%), Query Frame = 0
BLAST of CsaV3_1G045880 vs. TrEMBL
Match: tr|A0A1S3C949|A0A1S3C949_CUCME (uncharacterized protein LOC103498231 OS=Cucumis melo OX=3656 GN=LOC103498231 PE=4 SV=1) HSP 1 Score: 628.2 bits (1619), Expect = 1.2e-176 Identity = 332/405 (81.98%), Postives = 344/405 (84.94%), Query Frame = 0
BLAST of CsaV3_1G045880 vs. TrEMBL
Match: tr|A0A2I4DNH6|A0A2I4DNH6_9ROSI (uncharacterized protein LOC108981906 isoform X1 OS=Juglans regia OX=51240 GN=LOC108981906 PE=4 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 1.1e-113 Identity = 225/408 (55.15%), Postives = 274/408 (67.16%), Query Frame = 0
BLAST of CsaV3_1G045880 vs. TrEMBL
Match: tr|A0A2I4DNI2|A0A2I4DNI2_9ROSI (uncharacterized protein LOC108981906 isoform X2 OS=Juglans regia OX=51240 GN=LOC108981906 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 6.1e-112 Identity = 223/405 (55.06%), Postives = 271/405 (66.91%), Query Frame = 0
BLAST of CsaV3_1G045880 vs. TrEMBL
Match: tr|A0A2P5F0L5|A0A2P5F0L5_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_128820 PE=4 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 8.0e-112 Identity = 235/412 (57.04%), Postives = 285/412 (69.17%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |