CsaV3_1G045340 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G045340
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Cell division cycle 5-like protein
Location	chr1 : 31122239 .. 31122792 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAACACCCTCAGCAACTCCTGGTGGTGTTGGTCTCACTCCTCGGAGTGGCATGACACCAGCTAGGGATGCTTACTCGTTTGGCATGACTCCAAAAGGTACACCTATTAGAGATGAGTTACGTATCAATGAAGATATGGATGCACATGATAGTGCAAAACTGGAGTCTCAAAGACAAGCTGATTTGAGAAGGAATCTTAGCCTAGGATTAGGAAATCTTCCACAGCCTAAGAATGAGTACCAGGTAGTTATGCAACCAATTCCTGAAGACAAAGAAGAACCTGAGGAGACGATTGAAGAGGACATGTCTGATAGGATTGCTAGAGAACGAGCTGAGGAAGAAGCAAGGCAGCAGGCTTTGCTTAGGAAGAGATCAAAAGTGCTACAAAGGGAGCTTCCACGGCCTCCTACTGCGTCTTTGGAACTTATTAGAAATTCTTTGATGAGAGCTGATGGAGACAAGAGTTCATTTGTTCCACCTACCCCTATTGAGCAAGCTGATGAAATGATAAGAAAGGAACTTCTAGCTTTGTTAGAGCATGATAACGCAAA

mRNA sequence

ATGTTAACACCCTCAGCAACTCCTGGTGGTGTTGGTCTCACTCCTCGGAGTGGCATGACACCAGCTAGGGATGCTTACTCGTTTGGCATGACTCCAAAAGGTACACCTATTAGAGATGAGTTACGTATCAATGAAGATATGGATGCACATGATAGTGCAAAACTGGAGTCTCAAAGACAAGCTGATTTGAGAAGGAATCTTAGCCTAGGATTAGGAAATCTTCCACAGCCTAAGAATGAGTACCAGGTAGTTATGCAACCAATTCCTGAAGACAAAGAAGAACCTGAGGAGACGATTGAAGAGGACATGTCTGATAGGATTGCTAGAGAACGAGCTGAGGAAGAAGCAAGGCAGCAGGCTTTGCTTAGGAAGAGATCAAAAGTGCTACAAAGGGAGCTTCCACGGCCTCCTACTGCGTCTTTGGAACTTATTAGAAATTCTTTGATGAGAGCTGATGGAGACAAGAGTTCATTTGTTCCACCTACCCCTATTGAGCAAGCTGATGAAATGATAAGAAAGGAACTTCTAGCTTTGTTAGAGCATGATAACGCAAA

Coding sequence (CDS)

ATGTTAACACCCTCAGCAACTCCTGGTGGTGTTGGTCTCACTCCTCGGAGTGGCATGACACCAGCTAGGGATGCTTACTCGTTTGGCATGACTCCAAAAGGTACACCTATTAGAGATGAGTTACGTATCAATGAAGATATGGATGCACATGATAGTGCAAAACTGGAGTCTCAAAGACAAGCTGATTTGAGAAGGAATCTTAGCCTAGGATTAGGAAATCTTCCACAGCCTAAGAATGAGTACCAGGTAGTTATGCAACCAATTCCTGAAGACAAAGAAGAACCTGAGGAGACGATTGAAGAGGACATGTCTGATAGGATTGCTAGAGAACGAGCTGAGGAAGAAGCAAGGCAGCAGGCTTTGCTTAGGAAGAGATCAAAAGTGCTACAAAGGGAGCTTCCACGGCCTCCTACTGCGTCTTTGGAACTTATTAGAAATTCTTTGATGAGAGCTGATGGAGACAAGAGTTCATTTGTTCCACCTACCCCTATTGAGCAAGCTGATGAAATGATAAGAAAGGAACTTCTAGCTTTGTTAGAGCATGATAACGCAAA

Protein sequence

MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEEPEETIEEDMSDRIARERAEEEARQQALLRKRSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLEHDNAX

Homology

[Close]

BLAST of CsaV3_1G045340 vs. NCBI nr
Match: KGN66769.1 (hypothetical protein Csa_1G682630 [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 1.8e-73
Identity = 182/184 (98.91%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQ 60
           MLTPSATPGGVGLTPRSGMTPARDAYSFGM P GTPIRDELRINEDMDAHDSAKLESQRQ
Sbjct: 260 MLTPSATPGGVGLTPRSGMTPARDAYSFGMPPNGTPIRDELRINEDMDAHDSAKLESQRQ 319

Query: 61  ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 320 ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX 379

Query: 121 XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE 180
           XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE
Sbjct: 380 XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE 439

Query: 181 HDNA 185
           HDNA
Sbjct: 440 HDNA 443

[Close]

BLAST of CsaV3_1G045340 vs. NCBI nr
Match: XP_011648556.1 (PREDICTED: LOW QUALITY PROTEIN: cell division cycle 5-like protein [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 1.8e-73
Identity = 182/184 (98.91%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQ 60
           MLTPSATPGGVGLTPRSGMTPARDAYSFGM P GTPIRDELRINEDMDAHDSAKLESQRQ
Sbjct: 298 MLTPSATPGGVGLTPRSGMTPARDAYSFGMPPNGTPIRDELRINEDMDAHDSAKLESQRQ 357

Query: 61  ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 358 ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX 417

Query: 121 XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE 180
           XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE
Sbjct: 418 XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE 477

Query: 181 HDNA 185
           HDNA
Sbjct: 478 HDNA 481

[Close]

BLAST of CsaV3_1G045340 vs. NCBI nr
Match: XP_008453669.1 (PREDICTED: LOW QUALITY PROTEIN: cell division cycle 5-like protein [Cucumis melo])

HSP 1 Score: 284.6 bits (727), Expect = 2.3e-73
Identity = 181/184 (98.37%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQ 60
           MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDA DSAKLESQRQ
Sbjct: 411 MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDADDSAKLESQRQ 470

Query: 61  ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKE XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 471 ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEEXXXXXXXXXXXXXXXXXXXXXXXXXX 530

Query: 121 XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE 180
           XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEM+RKELLALLE
Sbjct: 531 XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMMRKELLALLE 590

Query: 181 HDNA 185
           HDNA
Sbjct: 591 HDNA 594

[Close]

BLAST of CsaV3_1G045340 vs. NCBI nr
Match: XP_008461195.1 (PREDICTED: LOW QUALITY PROTEIN: cell division cycle 5-like protein [Cucumis melo])

HSP 1 Score: 284.6 bits (727), Expect = 2.3e-73
Identity = 180/184 (97.83%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQ 60
           MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQ
Sbjct: 411 MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQ 470

Query: 61  ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKE XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 471 ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEEXXXXXXXXXXXXXXXXXXXXXXXXXX 530

Query: 121 XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE 180
           XXXXX  VLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEM+RKELLALLE
Sbjct: 531 XXXXXXXVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMVRKELLALLE 590

Query: 181 HDNA 185
           HDNA
Sbjct: 591 HDNA 594

[Close]

BLAST of CsaV3_1G045340 vs. NCBI nr
Match: XP_022960955.1 (cell division cycle 5-like protein isoform X2 [Cucurbita moschata])

HSP 1 Score: 279.3 bits (713), Expect = 9.8e-72
Identity = 180/184 (97.83%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQ 60
           MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDEL INEDMDAHDSAKLESQRQ
Sbjct: 335 MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELHINEDMDAHDSAKLESQRQ 394

Query: 61  ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 395 ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX 454

Query: 121 XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE 180
           XXXXXSKVLQRELPRPPTASLELIRNSL+ ADGDKSSFVPPTPIEQADEM+RKELLALLE
Sbjct: 455 XXXXXSKVLQRELPRPPTASLELIRNSLI-ADGDKSSFVPPTPIEQADEMVRKELLALLE 514

Query: 181 HDNA 185
           HDNA
Sbjct: 515 HDNA 517

[Close]

BLAST of CsaV3_1G045340 vs. TAIR10
Match: AT1G09770.1 (cell division cycle 5)

HSP 1 Score: 207.6 bits (527), Expect = 6.6e-54
Identity = 142/184 (77.17%), Postives = 155/184 (84.24%), Query Frame = 0


Query: 1   MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQ 60
           MLTPS TPGG GLTPR G+TP+RD  SF MTPKGTP RDEL INEDMD H+SAKLE QR+
Sbjct: 411 MLTPSMTPGGAGLTPRIGLTPSRDGSSFSMTPKGTPFRDELHINEDMDMHESAKLERQRR 470

Query: 61  ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            + RR+L  GL  LPQPKNEYQ+V QP      XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 471 EEARRSLRSGLTGLPQPKNEYQIVAQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 530

Query: 121 XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE 180
           XXXXXSKVLQR+LPRPP ASL +IRNSL+ ADGDKSS VPPTPIE AD+M+R+ELL LLE
Sbjct: 531 XXXXXSKVLQRDLPRPPAASLAVIRNSLLSADGDKSSVVPPTPIEVADKMVREELLQLLE 590

Query: 181 HDNA 185
           HDNA
Sbjct: 591 HDNA 594

[Close]

BLAST of CsaV3_1G045340 vs. Swiss-Prot
Match: sp|P92948|CDC5L_ARATH (Cell division cycle 5-like protein OS=Arabidopsis thaliana OX=3702 GN=CDC5 PE=1 SV=2)

HSP 1 Score: 207.6 bits (527), Expect = 1.2e-52
Identity = 142/184 (77.17%), Postives = 155/184 (84.24%), Query Frame = 0


Query: 1   MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQ 60
           MLTPS TPGG GLTPR G+TP+RD  SF MTPKGTP RDEL INEDMD H+SAKLE QR+
Sbjct: 411 MLTPSMTPGGAGLTPRIGLTPSRDGSSFSMTPKGTPFRDELHINEDMDMHESAKLERQRR 470

Query: 61  ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
            + RR+L  GL  LPQPKNEYQ+V QP      XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 471 EEARRSLRSGLTGLPQPKNEYQIVAQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 530

Query: 121 XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE 180
           XXXXXSKVLQR+LPRPP ASL +IRNSL+ ADGDKSS VPPTPIE AD+M+R+ELL LLE
Sbjct: 531 XXXXXSKVLQRDLPRPPAASLAVIRNSLLSADGDKSSVVPPTPIEVADKMVREELLQLLE 590

Query: 181 HDNA 185
           HDNA
Sbjct: 591 HDNA 594

[Close]

BLAST of CsaV3_1G045340 vs. Swiss-Prot
Match: sp|A7SD85|CDC5L_NEMVE (Cell division cycle 5-related protein OS=Nematostella vectensis OX=45351 GN=cdc5l PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-12
Identity = 54/186 (29.03%), Postives = 89/186 (47.85%), Query Frame = 0


Query: 3   TPSATPG-GVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINED---MDAHDSAKLESQ 62
           TP  TPG G G TPR GMTP R A     TP    +RD+L IN +   M+ ++S     Q
Sbjct: 411 TPYRTPGEGSGSTPRQGMTP-RGAIG---TPSQRSVRDKLNINPEDAVMEEYESECAAKQ 470

Query: 63  RQADLRRNLSLGLGNLPQPKNEYQVVMQPIPED--KEXXXXXXXXXXXXXXXXXXXXXXX 122
           +Q++ +  L  GL +LP P N++++V+   P +  +E                       
Sbjct: 471 QQSEAKEQLLAGLASLPAPSNDFEIVLPETPAEASEEHKPMDFVEDAADIDERALALRAK 530

Query: 123 XXXXXXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELL 182
                    S+ +QRELPRP   +  ++R + +          P + ++ A+E+I+KE++
Sbjct: 531 QEELERRRRSQAVQRELPRPSNVNTSVLRPTNVEP--------PLSALQMAEELIKKEMI 584

[Close]

BLAST of CsaV3_1G045340 vs. Swiss-Prot
Match: sp|Q2KJC1|CDC5L_BOVIN (Cell division cycle 5-like protein OS=Bos taurus OX=9913 GN=CDC5L PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.5e-10
Identity = 53/187 (28.34%), Postives = 85/187 (45.45%), Query Frame = 0


Query: 3   TPSATP--GGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRIN--EDMDAHDSAKLESQ 62
           TP  TP  G  GLTPRSG TP     S   TP  TP+RD+L IN  + M  +       Q
Sbjct: 411 TPFRTPSHGSEGLTPRSGTTPKPVINS---TPGRTPLRDKLNINPEDGMADYSDPSYVKQ 470

Query: 63  RQADLRRNLSLGLGNLPQPKNEYQVVMQPIPE---DKEXXXXXXXXXXXXXXXXXXXXXX 122
            + + R +L LGL  LP PKN++++V+    E   ++                       
Sbjct: 471 MERESREHLRLGLLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRD 530

Query: 123 XXXXXXXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKEL 182
                      K +Q++LPRP   +  ++R   +          P T +++++E+I+KE+
Sbjct: 531 AERVKEMKRMHKAVQKDLPRPSEVNETILRPLNVEP--------PLTDLQKSEELIKKEM 586

[Close]

BLAST of CsaV3_1G045340 vs. Swiss-Prot
Match: sp|Q99459|CDC5L_HUMAN (Cell division cycle 5-like protein OS=Homo sapiens OX=9606 GN=CDC5L PE=1 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 2.5e-10
Identity = 53/187 (28.34%), Postives = 85/187 (45.45%), Query Frame = 0


Query: 3   TPSATP--GGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRIN--EDMDAHDSAKLESQ 62
           TP  TP  G  GLTPRSG TP     S   TP  TP+RD+L IN  + M  +       Q
Sbjct: 411 TPFRTPSNGAEGLTPRSGTTPKPVINS---TPGRTPLRDKLNINPEDGMADYSDPSYVKQ 470

Query: 63  RQADLRRNLSLGLGNLPQPKNEYQVVMQPIPE---DKEXXXXXXXXXXXXXXXXXXXXXX 122
            + + R +L LGL  LP PKN++++V+    E   ++                       
Sbjct: 471 MERESREHLRLGLLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRD 530

Query: 123 XXXXXXXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKEL 182
                      K +Q++LPRP   +  ++R   +          P T +++++E+I+KE+
Sbjct: 531 AERVKEMKRMHKAVQKDLPRPSEVNETILRPLNVEP--------PLTDLQKSEELIKKEM 586

[Close]

BLAST of CsaV3_1G045340 vs. Swiss-Prot
Match: sp|Q6A068|CDC5L_MOUSE (Cell division cycle 5-like protein OS=Mus musculus OX=10090 GN=Cdc5l PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 5.6e-10
Identity = 52/187 (27.81%), Postives = 84/187 (44.92%), Query Frame = 0


Query: 3   TPSATP--GGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRIN--EDMDAHDSAKLESQ 62
           TP  TP  G  GLTPRSG TP         TP  TP+RD+L IN  + M  +       Q
Sbjct: 411 TPFRTPSNGAEGLTPRSGTTPKPVT---NATPGRTPLRDKLNINPEDGMADYSDPSYVKQ 470

Query: 63  RQADLRRNLSLGLGNLPQPKNEYQVVMQPIPE---DKEXXXXXXXXXXXXXXXXXXXXXX 122
            + + R +L LGL  LP PKN++++V+    E   ++                       
Sbjct: 471 MERESREHLRLGLLGLPAPKNDFEIVLPENAEKELEEREIDDTYIEDAADVDARKQAIRD 530

Query: 123 XXXXXXXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKEL 182
                      K +Q++LPRP   +  ++R   +          P T +++++E+I+KE+
Sbjct: 531 AERVKEMKRMHKAVQKDLPRPSEVNETILRPLNVEP--------PLTDLQKSEELIKKEM 586

[Close]

BLAST of CsaV3_1G045340 vs. TrEMBL
Match: tr|A0A0A0M0E8|A0A0A0M0E8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G682630 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 1.2e-73
Identity = 182/184 (98.91%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQ 60
           MLTPSATPGGVGLTPRSGMTPARDAYSFGM P GTPIRDELRINEDMDAHDSAKLESQRQ
Sbjct: 260 MLTPSATPGGVGLTPRSGMTPARDAYSFGMPPNGTPIRDELRINEDMDAHDSAKLESQRQ 319

Query: 61  ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 320 ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX 379

Query: 121 XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE 180
           XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE
Sbjct: 380 XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE 439

Query: 181 HDNA 185
           HDNA
Sbjct: 440 HDNA 443

[Close]

BLAST of CsaV3_1G045340 vs. TrEMBL
Match: tr|A0A1S3CDP0|A0A1S3CDP0_CUCME (LOW QUALITY PROTEIN: cell division cycle 5-like protein OS=Cucumis melo OX=3656 GN=LOC103499852 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.5e-73
Identity = 180/184 (97.83%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQ 60
           MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQ
Sbjct: 411 MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQ 470

Query: 61  ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKE XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 471 ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEEXXXXXXXXXXXXXXXXXXXXXXXXXX 530

Query: 121 XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE 180
           XXXXX  VLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEM+RKELLALLE
Sbjct: 531 XXXXXXXVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMVRKELLALLE 590

Query: 181 HDNA 185
           HDNA
Sbjct: 591 HDNA 594

[Close]

BLAST of CsaV3_1G045340 vs. TrEMBL
Match: tr|A0A1S3BWU1|A0A1S3BWU1_CUCME (LOW QUALITY PROTEIN: cell division cycle 5-like protein OS=Cucumis melo OX=3656 GN=LOC103494318 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.5e-73
Identity = 181/184 (98.37%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQ 60
           MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDA DSAKLESQRQ
Sbjct: 411 MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDADDSAKLESQRQ 470

Query: 61  ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKE XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 471 ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEEXXXXXXXXXXXXXXXXXXXXXXXXXX 530

Query: 121 XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE 180
           XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEM+RKELLALLE
Sbjct: 531 XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMMRKELLALLE 590

Query: 181 HDNA 185
           HDNA
Sbjct: 591 HDNA 594

[Close]

BLAST of CsaV3_1G045340 vs. TrEMBL
Match: tr|A0A0A0K6R7|A0A0A0K6R7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G431360 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 7.1e-71
Identity = 175/180 (97.22%), Postives = 176/180 (97.78%), Query Frame = 0


Query: 5   SATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQADLR 64
           SATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQADLR
Sbjct: 330 SATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQADLR 389

Query: 65  RNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 124
           RNLSLGLGNLPQPKNEYQVVMQPIPEDKE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 390 RNLSLGLGNLPQPKNEYQVVMQPIPEDKEEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 449

Query: 125 XSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLEHDNA 184
           X KVLQRELPRPP+ASLELIRNSLMRADGDKSSFVPPTPIEQADEMIR ELLALLEHDNA
Sbjct: 450 XXKVLQRELPRPPSASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRTELLALLEHDNA 509

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BLAST of CsaV3_1G045340 vs. TrEMBL
Match: tr|A0A067JUS2|A0A067JUS2_JATCU (MYB family protein OS=Jatropha curcas OX=180498 GN=JCGZ_23543 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.7e-62
Identity = 161/184 (87.50%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MLTPSATPGGVGLTPRSGMTPARDAYSFGMTPKGTPIRDELRINEDMDAHDSAKLESQRQ 60
           MLTPSATPGGVG TPR GMTP+RD YSFG+TPKGTPIRDELRINEDMD HDSAKLE +RQ
Sbjct: 411 MLTPSATPGGVGSTPRIGMTPSRDGYSFGVTPKGTPIRDELRINEDMDMHDSAKLEQRRQ 470

Query: 61  ADLRRNLSLGLGNLPQPKNEYQVVMQPIPEDKEXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           ADLR+NL  GL NLPQPKNEYQ+V+QP PED EXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 471 ADLRKNLRSGLSNLPQPKNEYQIVIQPPPEDNEXXXXXXXXXXXXXXXXXXXXXXXXXXX 530

Query: 121 XXXXXSKVLQRELPRPPTASLELIRNSLMRADGDKSSFVPPTPIEQADEMIRKELLALLE 180
           XXXX SKVLQRELPR P ASLELIRNSL+RADGDKSSFVPPT IEQA EMIRKELL+LLE
Sbjct: 531 XXXXRSKVLQRELPRLPAASLELIRNSLLRADGDKSSFVPPTSIEQAGEMIRKELLSLLE 590

Query: 181 HDNA 185
           HDNA
Sbjct: 591 HDNA 594

The following BLAST results are available for this feature:

BLAST of CsaV3_1G045340 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN66769.1	1.8e-73	98.91	hypothetical protein Csa_1G682630 [Cucumis sativus]	[more]
XP_011648556.1	1.8e-73	98.91	PREDICTED: LOW QUALITY PROTEIN: cell division cycle 5-like protein [Cucumis sati...	[more]
XP_008453669.1	2.3e-73	98.37	PREDICTED: LOW QUALITY PROTEIN: cell division cycle 5-like protein [Cucumis melo...	[more]
XP_008461195.1	2.3e-73	97.83	PREDICTED: LOW QUALITY PROTEIN: cell division cycle 5-like protein [Cucumis melo...	[more]
XP_022960955.1	9.8e-72	97.83	cell division cycle 5-like protein isoform X2 [Cucurbita moschata]	[more]

BLAST of CsaV3_1G045340 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G09770.1	6.6e-54	77.17	cell division cycle 5	[more]

BLAST of CsaV3_1G045340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P92948\|CDC5L_ARATH	1.2e-52	77.17	Cell division cycle 5-like protein OS=Arabidopsis thaliana OX=3702 GN=CDC5 PE=1 ...	[more]
sp\|A7SD85\|CDC5L_NEMVE	2.0e-12	29.03	Cell division cycle 5-related protein OS=Nematostella vectensis OX=45351 GN=cdc5...	[more]
sp\|Q2KJC1\|CDC5L_BOVIN	2.5e-10	28.34	Cell division cycle 5-like protein OS=Bos taurus OX=9913 GN=CDC5L PE=2 SV=1	[more]
sp\|Q99459\|CDC5L_HUMAN	2.5e-10	28.34	Cell division cycle 5-like protein OS=Homo sapiens OX=9606 GN=CDC5L PE=1 SV=2	[more]
sp\|Q6A068\|CDC5L_MOUSE	5.6e-10	27.81	Cell division cycle 5-like protein OS=Mus musculus OX=10090 GN=Cdc5l PE=1 SV=2	[more]

BLAST of CsaV3_1G045340 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0M0E8\|A0A0A0M0E8_CUCSA	1.2e-73	98.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G682630 PE=4 SV=1	[more]
tr\|A0A1S3CDP0\|A0A1S3CDP0_CUCME	1.5e-73	97.83	LOW QUALITY PROTEIN: cell division cycle 5-like protein OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A1S3BWU1\|A0A1S3BWU1_CUCME	1.5e-73	98.37	LOW QUALITY PROTEIN: cell division cycle 5-like protein OS=Cucumis melo OX=3656 ...	[more]
tr\|A0A0A0K6R7\|A0A0A0K6R7_CUCSA	7.1e-71	97.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G431360 PE=4 SV=1	[more]
tr\|A0A067JUS2\|A0A067JUS2_JATCU	2.7e-62	87.50	MYB family protein OS=Jatropha curcas OX=180498 GN=JCGZ_23543 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021786	Cdc5p/Cef1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0051301	cell division
biological_process	GO:0009870	defense response signaling pathway, resistance gene-dependent
biological_process	GO:0010204	defense response signaling pathway, resistance gene-independent
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0050832	defense response to fungus
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G045340.1	CsaV3_1G045340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021786	Pre-mRNA splicing factor component Cdc5p/Cef1	PFAM	PF11831	Myb_Cef	coord: 7..184 e-value: 3.8E-46 score: 157.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..114
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 95..184
None	No IPR available	PANTHER	PTHR10641:SF559	CELL DIVISION CYCLE 5-LIKE PROTEIN	coord: 95..184

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G045340	CSPI01G33400	Wild cucumber (PI 183967)	cpicucB000
CsaV3_1G045340	ClCG06G009620	Watermelon (Charleston Gray)	cucwcgB086

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G045340	Silver-seed gourd	carcucB0949
CsaV3_1G045340	Cucumber (Gy14) v2	cgybcucB001
CsaV3_1G045340	Cucurbita maxima (Rimu)	cmacucB0072
CsaV3_1G045340	Cucumber (Gy14) v1	cgycucB451
CsaV3_1G045340	Cucurbita maxima (Rimu)	cmacucB0099
CsaV3_1G045340	Cucurbita moschata (Rifu)	cmocucB0059
CsaV3_1G045340	Cucurbita moschata (Rifu)	cmocucB0090
CsaV3_1G045340	Cucurbita pepo (Zucchini)	cpecucB0799
CsaV3_1G045340	Cucurbita pepo (Zucchini)	cpecucB0874
CsaV3_1G045340	Bottle gourd (USVL1VR-Ls)	cuclsiB068
CsaV3_1G045340	Watermelon (Charleston Gray)	cucwcgB091
CsaV3_1G045340	Watermelon (97103) v2	cucwmbB079