CsaV3_1G045190 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G045190
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	proteinase inhibitor-like
Location	chr1 : 30871870 .. 30872061 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCTATCAACAGCACATCAATTTAGATGGCCAGAAGTAGTTGGAAAAAGTGGAGGAGAAGCGAAAAGAATAATAATAACTGAGGCGCCTTTCGTGACTGCTGTTTTTATTAAAGAGGGACAGGGTCGACTTACTGATTTTTGTTGCAATCGTGTTTATATTGTGCTTGATCCAAAGGATAATGTCGTCGAT

mRNA sequence

AATCTATCAACAGCACATCAATTTAGATGGCCAGAAGTAGTTGGAAAAAGTGGAGGAGAAGCGAAAAGAATAATAATAACTGAGGCGCCTTTCGTGACTGCTGTTTTTATTAAAGAGGGACAGGGTCGACTTACTGATTTTTGTTGCAATCGTGTTTATATTGTGCTTGATCCAAAGGATAATGTCGTCGAT

Coding sequence (CDS)

AATCTATCAACAGCACATCAATTTAGATGGCCAGAAGTAGTTGGAAAAAGTGGAGGAGAAGCGAAAAGAATAATAATAACTGAGGCGCCTTTCGTGACTGCTGTTTTTATTAAAGAGGGACAGGGTCGACTTACTGATTTTTGTTGCAATCGTGTTTATATTGTGCTTGATCCAAAGGATAATGTCGTCGAT

Protein sequence

NLSTAHQFRWPEVVGKSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYIVLDPKDNVVD

Homology

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BLAST of CsaV3_1G045190 vs. NCBI nr
Match: XP_022147245.1 (uncharacterized protein LOC111016241 [Momordica charantia])

HSP 1 Score: 77.0 bits (188), Expect = 2.5e-11
Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 0


Query: 7   QFRWPEVVGKSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYIVLDPKDNVVD 65
           +FRWPEV+G  GG A+ II  EAP+   V++  G  RL+DFCCNRVY+VLD +  V+D
Sbjct: 484 KFRWPEVIGMKGGVARVIIKREAPYAIVVYLVPGMVRLSDFCCNRVYVVLDERGVVID 541

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BLAST of CsaV3_1G045190 vs. NCBI nr
Match: XP_022876728.1 (glu S.griseus protease inhibitor-like [Olea europaea var. sylvestris])

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-08
Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 0


Query: 3  STAHQFRWPEVVGKSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYIVLDPKDNV 62
          S  ++F WP  +G  G +AKRII  + PFVTAV +  G+G   DFCCNRV++ +D    V
Sbjct: 17 SGGYKFMWPNTLGMYGEQAKRIIEKDNPFVTAVIVHRGEGVTDDFCCNRVWVYVDEHGKV 76

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BLAST of CsaV3_1G045190 vs. NCBI nr
Match: XP_006299344.1 (proteinase inhibitor [Capsella rubella] >EOA32242.1 hypothetical protein CARUB_v10015502mg [Capsella rubella])

HSP 1 Score: 67.0 bits (162), Expect = 2.6e-08
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 9  RWPEVVGKSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYIVLD 58
          RWPE+VGKSG  AK  I  E P V A+ +  G GR++DFCCN+V++VLD
Sbjct: 25 RWPELVGKSGEVAKMTIERENPNVLAILLHAGDGRISDFCCNKVFVVLD 73

[Close]

BLAST of CsaV3_1G045190 vs. NCBI nr
Match: KCW85032.1 (hypothetical protein EUGRSUZ_B01872 [Eucalyptus grandis])

HSP 1 Score: 67.0 bits (162), Expect = 2.6e-08
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 0


Query: 9  RWPEVVGKSGGEAKRIIITEAPFVTAVFIKEG-QGRLTDFCCNRVYIVLDPKDNVV 64
          RWPE+VG++G +AK +I  +   VT + +K G +   TDFCCNRVY+ +D KDNVV
Sbjct: 31 RWPELVGQNGEKAKAVIEKDNALVTVILLKVGKEYGFTDFCCNRVYVYIDDKDNVV 86

[Close]

BLAST of CsaV3_1G045190 vs. NCBI nr
Match: KCW80912.1 (hypothetical protein EUGRSUZ_C02276 [Eucalyptus grandis])

HSP 1 Score: 65.1 bits (157), Expect = 1.0e-07
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0


Query: 9  RWPEVVGKSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYI 55
          RWPE++G+SG  AK  I  + P+VTAV I  GQGR  +FCCNRVY+
Sbjct: 26 RWPELIGQSGDNAKAAIERDNPYVTAVLIPMGQGREGNFCCNRVYV 71

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BLAST of CsaV3_1G045190 vs. TAIR10
Match: AT3G46860.1 (Serine protease inhibitor, potato inhibitor I-type family protein)

HSP 1 Score: 62.8 bits (151), Expect = 9.0e-11
Identity = 26/58 (44.83%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 7  QFRWPEVVGKSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYIVLDPKDNVVD 65
          ++RWPE+VGK+G  AK  I  E P V A+ ++ G+ R+ +FCCNRV++ L     V D
Sbjct: 23 KYRWPELVGKNGQLAKMTIERENPNVLAIVLRYGEKRIENFCCNRVFVYLGSNGQVAD 80

[Close]

BLAST of CsaV3_1G045190 vs. TAIR10
Match: AT3G50020.1 (Serine protease inhibitor, potato inhibitor I-type family protein)

HSP 1 Score: 43.5 bits (101), Expect = 5.7e-05
Identity = 25/52 (48.08%), Postives = 29/52 (55.77%), Query Frame = 0


Query: 10 WPEVVGKSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYIVLDPKDN 62
          WPE+ G  G EAKRII  + P V  V I +    L   CCNRV IV  P +N
Sbjct: 33 WPELNGVKGLEAKRIIEHDNPKVVVVIIPDDVAVLAVNCCNRV-IVRVPVNN 83

[Close]

BLAST of CsaV3_1G045190 vs. TAIR10
Match: AT5G43580.1 (Serine protease inhibitor, potato inhibitor I-type family protein)

HSP 1 Score: 42.7 bits (99), Expect = 9.7e-05
Identity = 19/45 (42.22%), Postives = 27/45 (60.00%), Query Frame = 0


Query: 10 WPEVVGKSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYI 55
          WPE++G  G +AK +I  E P + AV I +G      F C+RVY+
Sbjct: 40 WPELLGAKGEDAKEVIERENPKMKAVIILDGTVVPEIFICSRVYV 84

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BLAST of CsaV3_1G045190 vs. Swiss-Prot
Match: sp|P82381|ICI_LINUS (Proteinase inhibitor OS=Linum usitatissimum OX=4006 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 5.4e-05
Identity = 20/48 (41.67%), Postives = 30/48 (62.50%), Query Frame = 0


Query: 10 WPEVVGKSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYIVLD 58
          WPE+VGKSG  A   +  E   V A+ +KEG     DF C+RV+++++
Sbjct: 10 WPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVN 57

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BLAST of CsaV3_1G045190 vs. Swiss-Prot
Match: sp|P19873|ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima OX=3661 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 9.2e-05
Identity = 24/54 (44.44%), Postives = 31/54 (57.41%), Query Frame = 0


Query: 10 WPEVVGKSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYIVLDPKDNVV 64
          WP +VG  G  AK II  + P V AV ++EG     DF CNRV I ++ +  VV
Sbjct: 9  WPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVV 62

[Close]

BLAST of CsaV3_1G045190 vs. Swiss-Prot
Match: sp|P80211|ATSI_AMACA (Trypsin/subtilisin inhibitor OS=Amaranthus caudatus OX=3567 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.2e-04
Identity = 23/54 (42.59%), Postives = 32/54 (59.26%), Query Frame = 0


Query: 10 WPEVVGKSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYIVLDPKDNVV 64
          WPE+VG+ G +A  II  E P V ++   E  G   DF C+RV++V+D    VV
Sbjct: 10 WPELVGEYGYKAAAIIERENPNVRSIVKHERSGFTKDFRCDRVWVVVDSTGVVV 63

[Close]

BLAST of CsaV3_1G045190 vs. Swiss-Prot
Match: sp|P24076|BGIA_MOMCH (Glu S.griseus protease inhibitor OS=Momordica charantia OX=3673 PE=1 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 4.6e-04
Identity = 19/45 (42.22%), Postives = 27/45 (60.00%), Query Frame = 0


Query: 10 WPEVVGKSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYI 55
          WP++VG +G  AK +I  E P V AV ++ G     DF C+RV +
Sbjct: 9  WPQLVGSTGAAAKAVIERENPRVRAVIVRVGSPVTADFRCDRVRV 53

[Close]

BLAST of CsaV3_1G045190 vs. TrEMBL
Match: tr|A0A059D382|A0A059D382_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B01872 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-08
Identity = 29/56 (51.79%), Postives = 40/56 (71.43%), Query Frame = 0


Query: 9  RWPEVVGKSGGEAKRIIITEAPFVTAVFIKEG-QGRLTDFCCNRVYIVLDPKDNVV 64
          RWPE+VG++G +AK +I  +   VT + +K G +   TDFCCNRVY+ +D KDNVV
Sbjct: 31 RWPELVGQNGEKAKAVIEKDNALVTVILLKVGKEYGFTDFCCNRVYVYIDDKDNVV 86

[Close]

BLAST of CsaV3_1G045190 vs. TrEMBL
Match: tr|R0G9B1|R0G9B1_9BRAS (Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10015502mg PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-08
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 0


Query: 9  RWPEVVGKSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYIVLD 58
          RWPE+VGKSG  AK  I  E P V A+ +  G GR++DFCCN+V++VLD
Sbjct: 25 RWPELVGKSGEVAKMTIERENPNVLAILLHAGDGRISDFCCNKVFVVLD 73

[Close]

BLAST of CsaV3_1G045190 vs. TrEMBL
Match: tr|A0A059CRB3|A0A059CRB3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C02276 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.6e-08
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0


Query: 9  RWPEVVGKSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYI 55
          RWPE++G+SG  AK  I  + P+VTAV I  GQGR  +FCCNRVY+
Sbjct: 26 RWPELIGQSGDNAKAAIERDNPYVTAVLIPMGQGREGNFCCNRVYV 71

[Close]

BLAST of CsaV3_1G045190 vs. TrEMBL
Match: tr|A0A2G9GLT0|A0A2G9GLT0_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21237 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.6e-08
Identity = 28/57 (49.12%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 6  HQFRWPEVVGKSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYIVLDPKDNV 63
          H+F WP +VG    +AK II  + P+VT VFIK+G+   T+FCCNRV + LD    V
Sbjct: 24 HKFEWPNLVGTDPQQAKVIIEHDNPYVTVVFIKKGELPYTNFCCNRVVVFLDENGKV 80

[Close]

BLAST of CsaV3_1G045190 vs. TrEMBL
Match: tr|A0A1R3GC50|A0A1R3GC50_9ROSI (Proteinase inhibitor I13, potato inhibitor I OS=Corchorus olitorius OX=93759 GN=COLO4_35913 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-07
Identity = 28/59 (47.46%), Postives = 38/59 (64.41%), Query Frame = 0


Query: 6  HQFRWPEVVGKSGGEAKRIIITEAPFVTAVFIKEGQGRLTDFCCNRVYIVLDPKDNVVD 65
          H+ RWPE++GKS  EA   I  E P VT   +  G+  L DFCCNRVY+ +D  +NV++
Sbjct: 26 HKVRWPELLGKSEQEATSTIQRENPEVTVEVLTPGRVGLNDFCCNRVYLPVDANNNVIN 84

The following BLAST results are available for this feature:

BLAST of CsaV3_1G045190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022147245.1	2.5e-11	55.17	uncharacterized protein LOC111016241 [Momordica charantia]	[more]
XP_022876728.1	2.0e-08	46.67	glu S.griseus protease inhibitor-like [Olea europaea var. sylvestris]	[more]
XP_006299344.1	2.6e-08	57.14	proteinase inhibitor [Capsella rubella] >EOA32242.1 hypothetical protein CARUB_v...	[more]
KCW85032.1	2.6e-08	51.79	hypothetical protein EUGRSUZ_B01872 [Eucalyptus grandis]	[more]
KCW80912.1	1.0e-07	58.70	hypothetical protein EUGRSUZ_C02276 [Eucalyptus grandis]	[more]

BLAST of CsaV3_1G045190 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G46860.1	9.0e-11	44.83	Serine protease inhibitor, potato inhibitor I-type family protein	[more]
AT3G50020.1	5.7e-05	48.08	Serine protease inhibitor, potato inhibitor I-type family protein	[more]
AT5G43580.1	9.7e-05	42.22	Serine protease inhibitor, potato inhibitor I-type family protein	[more]

BLAST of CsaV3_1G045190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P82381\|ICI_LINUS	5.4e-05	41.67	Proteinase inhibitor OS=Linum usitatissimum OX=4006 PE=1 SV=1	[more]
sp\|P19873\|ITH5_CUCMA	9.2e-05	44.44	Inhibitor of trypsin and hageman factor OS=Cucurbita maxima OX=3661 PE=1 SV=1	[more]
sp\|P80211\|ATSI_AMACA	1.2e-04	42.59	Trypsin/subtilisin inhibitor OS=Amaranthus caudatus OX=3567 PE=1 SV=1	[more]
sp\|P24076\|BGIA_MOMCH	4.6e-04	42.22	Glu S.griseus protease inhibitor OS=Momordica charantia OX=3673 PE=1 SV=1	[more]

BLAST of CsaV3_1G045190 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A059D382\|A0A059D382_EUCGR	1.7e-08	51.79	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B01872 PE=4 SV...	[more]
tr\|R0G9B1\|R0G9B1_9BRAS	1.7e-08	57.14	Uncharacterized protein OS=Capsella rubella OX=81985 GN=CARUB_v10015502mg PE=4 S...	[more]
tr\|A0A059CRB3\|A0A059CRB3_EUCGR	6.6e-08	58.70	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C02276 PE=4 SV...	[more]
tr\|A0A2G9GLT0\|A0A2G9GLT0_9LAMI	6.6e-08	49.12	Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_21237 P...	[more]
tr\|A0A1R3GC50\|A0A1R3GC50_9ROSI	1.1e-07	47.46	Proteinase inhibitor I13, potato inhibitor I OS=Corchorus olitorius OX=93759 GN=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009611	response to wounding

Vocabulary: **Molecular Function**
Term	Definition
GO:0004867	serine-type endopeptidase inhibitor activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036354	Prot_inh_pot1_sf
IPR000864	Prot_inh_pot1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009611	response to wounding
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004867	serine-type endopeptidase inhibitor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G045190.1	CsaV3_1G045190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PFAM	PF00280	potato_inhibit	coord: 9..63 e-value: 3.8E-16 score: 59.4
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PANTHER	PTHR33091	FAMILY NOT NAMED	coord: 9..62
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PROSITE	PS00285	POTATO_INHIBITOR	coord: 10..21
IPR000864	Proteinase inhibitor I13, potato inhibitor I	PRODOM	PD002604		coord: 10..51 e-value: 3.0E-6 score: 116.0
None	No IPR available	GENE3D	G3DSA:3.30.10.10		coord: 3..64 e-value: 9.4E-19 score: 69.4
None	No IPR available	PANTHER	PTHR33091:SF13	PR-6 PROTEINASE INHIBITOR FAMILY PROTEIN-RELATED	coord: 9..62
IPR036354	Proteinase inhibitor I13, potato inhibitor I superfamily	SUPERFAMILY	SSF54654	CI-2 family of serine protease inhibitors	coord: 6..63

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G045190	Cucsa.027370	Cucumber (Gy14) v1	cgycucB603

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G045190	Silver-seed gourd	carcucB0949
CsaV3_1G045190	Cucumber (Gy14) v2	cgybcucB001
CsaV3_1G045190	Cucurbita maxima (Rimu)	cmacucB0072
CsaV3_1G045190	Cucurbita maxima (Rimu)	cmacucB0099
CsaV3_1G045190	Cucurbita moschata (Rifu)	cmocucB0059
CsaV3_1G045190	Cucurbita moschata (Rifu)	cmocucB0090
CsaV3_1G045190	Cucurbita pepo (Zucchini)	cpecucB0799
CsaV3_1G045190	Cucurbita pepo (Zucchini)	cpecucB0874
CsaV3_1G045190	Wild cucumber (PI 183967)	cpicucB000
CsaV3_1G045190	Bottle gourd (USVL1VR-Ls)	cuclsiB068
CsaV3_1G045190	Melon (DHL92) v3.5.1	cucmeB044
CsaV3_1G045190	Melon (DHL92) v3.6.1	cucmedB041