CsaV3_1G044840 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCCCAAGCTATCAGATTTTGGGTTGGCAAGAATGTTGGGAATGGATGAAACAAAAGTATTCACAGATGTTAGAGGAACCATTGGGTATATGGATCCTGAATACATGAGCAATGCTAAGCTCACATGTGCAAGTGATATTTATAGTTTTGGCATTGTGGCTCTTCAGCTCTTATCTGGTCAAAAGGTCATTGATTTGGATCTTGATGCACGAGATCAATTAACAAGAAAGGTTTGCAATCTCATTTTTATGTCCTTTTGTATTTATTATCATCTAATGTAGTTCACAATTAAATTAAGAAATTGGTTTAGATATATTTTATATTTTATGATATGAGATATATATGGATTGCAGGCAAAGGATGTAAACATGGGGTTAAGAGCGTTGAGTGATTTTGAAGACCCAAAATTAAAAGGGAACGTAAATAAAGCAGACTTTGAATCCATTTTACAAGTTGCTGTTCTTTGTGTGGCAAAATCAAGTAAAGGAAGACCCACAATTGACATTGTCTTTGAGGAATTGGACAAAGCTTGGCAAAATACTATCGTCAACGAGGTTACTAATCATCAACATCATCTAGAAACTAATTAA ATGGAGCCCAAGCTATCAGATTTTGGGTTGGCAAGAATGTTGGGAATGGATGAAACAAAAGTATTCACAGATGTTAGAGGAACCATTGGGTATATGGATCCTGAATACATGAGCAATGCTAAGCTCACATGTGCAAGTGATATTTATAGTTTTGGCATTGTGGCTCTTCAGCTCTTATCTGGTCAAAAGGTCATTGATTTGGATCTTGATGCACGAGATCAATTAACAAGAAAGGCAAAGGATGTAAACATGGGGTTAAGAGCGTTGAGTGATTTTGAAGACCCAAAATTAAAAGGGAACGTAAATAAAGCAGACTTTGAATCCATTTTACAAGTTGCTGTTCTTTGTGTGGCAAAATCAAGTAAAGGAAGACCCACAATTGACATTGTCTTTGAGGAATTGGACAAAGCTTGGCAAAATACTATCGTCAACGAGGTTACTAATCATCAACATCATCTAGAAACTAATTAA ATGGAGCCCAAGCTATCAGATTTTGGGTTGGCAAGAATGTTGGGAATGGATGAAACAAAAGTATTCACAGATGTTAGAGGAACCATTGGGTATATGGATCCTGAATACATGAGCAATGCTAAGCTCACATGTGCAAGTGATATTTATAGTTTTGGCATTGTGGCTCTTCAGCTCTTATCTGGTCAAAAGGTCATTGATTTGGATCTTGATGCACGAGATCAATTAACAAGAAAGGCAAAGGATGTAAACATGGGGTTAAGAGCGTTGAGTGATTTTGAAGACCCAAAATTAAAAGGGAACGTAAATAAAGCAGACTTTGAATCCATTTTACAAGTTGCTGTTCTTTGTGTGGCAAAATCAAGTAAAGGAAGACCCACAATTGACATTGTCTTTGAGGAATTGGACAAAGCTTGGCAAAATACTATCGTCAACGAGGTTACTAATCATCAACATCATCTAGAAACTAATTAA MEPKLSDFGLARMLGMDETKVFTDVRGTIGYMDPEYMSNAKLTCASDIYSFGIVALQLLSGQKVIDLDLDARDQLTRKAKDVNMGLRALSDFEDPKLKGNVNKADFESILQVAVLCVAKSSKGRPTIDIVFEELDKAWQNTIVNEVTNHQHHLETN
BLAST of CsaV3_1G044840 vs. NCBI nr
Match: KGN66709.1 (hypothetical protein Csa_1G662250 [Cucumis sativus]) HSP 1 Score: 313.2 bits (801), Expect = 5.2e-82 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. NCBI nr
Match: XP_004142602.1 (PREDICTED: cysteine-rich receptor-like protein kinase 1 [Cucumis sativus]) HSP 1 Score: 289.7 bits (740), Expect = 6.1e-75 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. NCBI nr
Match: XP_008444026.1 (PREDICTED: cysteine-rich receptor-like protein kinase 1 [Cucumis melo]) HSP 1 Score: 288.1 bits (736), Expect = 1.8e-74 Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. NCBI nr
Match: XP_022152108.1 (probable leucine-rich repeat receptor-like protein kinase At5g49770 [Momordica charantia]) HSP 1 Score: 271.6 bits (693), Expect = 1.7e-69 Identity = 136/150 (90.67%), Postives = 140/150 (93.33%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. NCBI nr
Match: XP_022927539.1 (probable leucine-rich repeat receptor-like protein kinase At5g49770 [Cucurbita moschata]) HSP 1 Score: 268.9 bits (686), Expect = 1.1e-68 Identity = 134/150 (89.33%), Postives = 140/150 (93.33%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. TAIR10
Match: AT5G02070.1 (Protein kinase family protein) HSP 1 Score: 97.1 bits (240), Expect = 1.1e-20 Identity = 59/163 (36.20%), Postives = 93/163 (57.06%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. TAIR10
Match: AT1G34210.1 (somatic embryogenesis receptor-like kinase 2) HSP 1 Score: 91.3 bits (225), Expect = 5.8e-19 Identity = 50/136 (36.76%), Postives = 77/136 (56.62%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. TAIR10
Match: AT2G19210.1 (Leucine-rich repeat transmembrane protein kinase protein) HSP 1 Score: 90.9 bits (224), Expect = 7.6e-19 Identity = 52/139 (37.41%), Postives = 78/139 (56.12%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. TAIR10
Match: AT5G47070.1 (Protein kinase superfamily protein) HSP 1 Score: 90.9 bits (224), Expect = 7.6e-19 Identity = 54/136 (39.71%), Postives = 77/136 (56.62%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. TAIR10
Match: AT1G16260.1 (Wall-associated kinase family protein) HSP 1 Score: 90.5 bits (223), Expect = 9.9e-19 Identity = 46/133 (34.59%), Postives = 83/133 (62.41%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. Swiss-Prot
Match: sp|Q9LZM4|WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana OX=3702 GN=WAKL20 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.9e-19 Identity = 59/163 (36.20%), Postives = 93/163 (57.06%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. Swiss-Prot
Match: sp|Q9XIC7|SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=SERK2 PE=1 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.0e-17 Identity = 50/136 (36.76%), Postives = 77/136 (56.62%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. Swiss-Prot
Match: sp|Q9LTC0|PBL19_ARATH (Probable serine/threonine-protein kinase PBL19 OS=Arabidopsis thaliana OX=3702 GN=PBL19 PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.4e-17 Identity = 54/136 (39.71%), Postives = 77/136 (56.62%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. Swiss-Prot
Match: sp|O65924|Y2921_ARATH (Putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Arabidopsis thaliana OX=3702 GN=At2g19210 PE=3 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.4e-17 Identity = 52/139 (37.41%), Postives = 78/139 (56.12%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. Swiss-Prot
Match: sp|Q9SA25|WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana OX=3702 GN=WAKL8 PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17 Identity = 46/133 (34.59%), Postives = 83/133 (62.41%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. TrEMBL
Match: tr|A0A0A0M080|A0A0A0M080_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G662250 PE=4 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 3.4e-82 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. TrEMBL
Match: tr|A0A1S3BA67|A0A1S3BA67_CUCME (cysteine-rich receptor-like protein kinase 1 OS=Cucumis melo OX=3656 GN=LOC103487474 PE=4 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 1.2e-74 Identity = 144/145 (99.31%), Postives = 144/145 (99.31%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. TrEMBL
Match: tr|A0A067DRB9|A0A067DRB9_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g040826mg PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 1.1e-64 Identity = 119/146 (81.51%), Postives = 139/146 (95.21%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. TrEMBL
Match: tr|A0A2H5QN50|A0A2H5QN50_CITUN (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_245510 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.4e-64 Identity = 121/150 (80.67%), Postives = 141/150 (94.00%), Query Frame = 0
BLAST of CsaV3_1G044840 vs. TrEMBL
Match: tr|B9SHK5|B9SHK5_RICCO (Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis OX=3988 GN=RCOM_1122520 PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.4e-64 Identity = 121/142 (85.21%), Postives = 137/142 (96.48%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|