CsaV3_1G044700 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TATCATTTAAACACCTATTTTTTTTTAATCAATGATCTTAGACTGTTATTTAGAATCAACTCTGTAATATGTATATATATATATATATGAAAGAAAAAGATGGTTGTAAATGGATATTGATTTTTTAGTTTTATATATATAAAATAAAAGTTAGGGAGAAGGAAGAGAGGATTTAAGCATATGAGAATGGTATAAAAGAAAAGAGAAGAACCAAAAAACCGGTCAACTGTCCCTTCTTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGGACCAGTCTCCCACTTTTAGCTTCGTTGAAATTTGTTGGGAAAAGCGCCAAATGCCCACAACAATTCACAAACCCAACGCCGCTGCTGCTATTCAAACCAATCCCAAATTCCCTCACCTCCCTTCCCTCCTTTTCTCTTCCAAGCTAGCTCATGACGCCACCTCCGCCGCCATGACCAAGCTTTGCCGGAAACTCGTCCGTTGGAGGCTCCTTGAACGGGTCTCCCTTGTCCGTCACTTCTTCCGCCTCGTCTGGGATAGGCTTTTTGCCTGTTCTTCTGGAACAACTCCTAAAAAATACCGCCGCCTCCCCTCCCGTTCTCCACCTCCCCCCACCGACGGTGGCTCCTCGCCGGACCAGCCTACCACTAGCGGTGGCTTCGACTCCGATTTCGATTTCGACTCTGCTGATTTGGTTTCTCTTAAGATTAGTCTCTTGGGAGATTGCCAGATTGGAAAAACAAGCTTTGTGGTAAATTTTCGCCTCTTGTATAAAGTTCATTCTAGTCTTTAATCTCTTCTCTCTCTCTACTTTGGTAACCCTTTTGTTTGTTTGTTTGTTTGTTTGTTCTTTTGATTTTCATTAGATCAAGTATGTGGGCGATGAGCAGGAGAGAAATAGCTTACAGATGAGTGGAATAAACCTAATGAACAAAACATTAAATATTCAAAATGCTCTGATTTCGTTCTGTATCTGGGATGTTAAAGGTAAAATTAAACTTCCCCTGTTTCTTGATTCCTTTTTCCTTTATGGGTTCTGAAGATATTTGAAGAAAAAAAAAATTCTAATACGAGTAGTTCGATGAAGGTGACAGCAGTTCACAAGATCAGCTTCCATTAGCCTGCAAAGATGCAGTGGCAATCTTGTTCATGTTCGATCTCACAAGTCGAAGAACTCTGAACAGGTCCGTTTCTACGAAAATCTTGTCATTCTTGTTTGAAATTTGAAATTTGAGTTAATTTTTTATTTGGTTTTTGCAGTGTTGTTGATTGGTATACGGAAGCGAGGAAATGGAACCAGGTAAAGCTTTTGATTCTATATTTGGCTATTGATGGCAATGGCATTTTGTGAAGTTAATGTTGATTGGGTTTGATTTTGATTCCAAACTTTGAACTGTTTCTTTTATTTTCTTTCCTTTTACTGAAACCATGTCATTAAGAGGCTTTTATTGCTAATAATGAGTGACCCATTTGGCCGTTGTGGTTGAAACATTTTTTTTTTAGCACCAAGTGAATGATAGAAAGTCCTGTGAGAATTGATGAGAAAGAGATGTGAGACTCTCTTTATCTTTTGAATCTGTGAACCGGTTAAAGAATACTTCTCCTCCACCTAACTTCTTTTTGAAGAAAATGGTTTGTTATTATGAGATGTTTTGGGTGTCGGTTTCCATAAGCCTAATCTTTCTTTTTCCATTTCTATATATGGATTGTGTTGAAAAAAGAGTTAATAAATTCTGTGTTTGTGTAAATTTTGTTTGGTTTGCACGTCCGATAAAACTTCAAAGGTAGGTTTCCCAAATCAAGTTTATATTGCCTAACCAAAAGGAATAGATGCCAACATGACCACAGTAGTTTGAATCTCCTTAACCCCACATGTTGAACAAAATGAAGAGGAATAGACTATCCACAAAATATATATTAAACCACGTTTTTGGATAACTTGGATTTGTATTGGTCGTACAACCTTGAAATAGCGACCTGATCATAGTTTATGTGGTTTTTGCTTCATGGGCTGTGCTCATGTAACTTAGAGTTTAAGAAGGTAGTACGTTTTTGCCTGAGAAATTTGTATGTAGTACTCCATAAACTCAAACTTATTAAAATCTTGTTATTCAAAACAACCTCAGAGTAATTATTGGGTCATTTCTTGTTTGTTGCAGACAGCCATTCCCATTTTGATAGGAACCAAATTTGACGACTTTGTTCGACTCCCACCCAATTTGCAGTGGACAATTGTTAGTCAGGTAAATCAATCATCAGCTTGAAAATTCCATTTTAACACTTTTCTCACATGGTACTGTTGCATCTTTTTTCTGGGGGGGTTTAATGGCAAGACTTTTAGCCATCAAAACCGCGTGGAATAATATATATGCTTTGAGGGGGACCCCTTCCATTTTTTCTTCATCAAACTTGTCCTTGAATTCTTGTTTTTGTGTTCACAGGCAAGAGCTTATGCCAGAGTTATGAAGGCTACTCTATTCTTCTCGAGCTCCATTCACAACATCAATGTCAACAAGATTTTTAAGTTCATAGCAGCCAAGCTGTTTGACATCCCGTGGTCCATTGAGCGGAACCTCACTATTGGAGAGCCGATCATTGACTTCTAACTTTCGTTACACTCAACCTGATTCTGATGTACATACAATACACGTAAGAAAGAAAGAAAAAGAAGAAAGTAGGAGAAAAAAATTTCCTTTTTTCCGAACAGGTTGATTGATGATCTGTTTGGGATTTGTTATCTGATATCTTATTTGTAACTTTTTGTTTTGATCAAAGTGAAAGTATTCTTATTTAAAGGAATAAAAAGAAAAGAAAAATAGAGAATGGATGAGATTCCTCTTTACTCAAGGACAGATTTCATTTGATTGCGTTAGAGGGAGGGTATGGAAAGAGATTCTGGTGGGGATTATTATTTTCCATGGCTGATAGGAAACTGTCCTATGAAGCTTTCATGTTCATTACTTCTAGGTGACACAATCCAAGGACGAAGCAAACTCTTGTCCAACTCCAACTCCAACTCCCATGTGATTTAATGTCTTGGAAATTAATATGTAAATAGAGTTTGTATGAGTTGAAATCAAGCAATGGACGTCAAGACGTTTACGGAGGTTGTTCCATGGCAGGAGGGGATGGGGATGATTTTCGCATCCCATTTTCAATTTAATTTTGTGAGTTCAAGGCTTCGAGCATGGATTCATAGCCGAGTTTTTATTTTTATTTTTCTAAACAAAAAAACAGCAGAAATTATAAAAAAAAATACAACATTTGACAAAATATTTACACTTTCATTTTAATTTTGATTCTATGGACGTTGGATATCATCTTCCATAATATTTCATTCATTGGACCACAAGGTACAAGATGATCAAAATAAAGGGCTAGAGATAAGCTCAAAGATACAAAGAGAACAACTCAAGTAAAAACGCTACAATTTAGAGCCATAACATTTATTATTTCCTTGCCTTGACTATGCTATTTAAGCTCAAGAAAATCTTTGTGCTAGGGTTGTTGCATATGTTTGTTTTATTATTCATCTTTGAGATAAAGAAATGTTGGTGATCAAGCATTCTTTCTCATATATCTATGTGCGTGTTTGTTGGTCATGTGAATAGTGTGTTGAAGATTTATGTGAAACAAATCTATTTGCATTGCTTTAGGGGGATATAAAGCCTAGGGAGTTCTCATCAACTTAGG ATGCCCACAACAATTCACAAACCCAACGCCGCTGCTGCTATTCAAACCAATCCCAAATTCCCTCACCTCCCTTCCCTCCTTTTCTCTTCCAAGCTAGCTCATGACGCCACCTCCGCCGCCATGACCAAGCTTTGCCGGAAACTCGTCCGTTGGAGGCTCCTTGAACGGGTCTCCCTTGTCCGTCACTTCTTCCGCCTCGTCTGGGATAGGCTTTTTGCCTGTTCTTCTGGAACAACTCCTAAAAAATACCGCCGCCTCCCCTCCCGTTCTCCACCTCCCCCCACCGACGGTGGCTCCTCGCCGGACCAGCCTACCACTAGCGGTGGCTTCGACTCCGATTTCGATTTCGACTCTGCTGATTTGGTTTCTCTTAAGATTAGTCTCTTGGGAGATTGCCAGATTGGAAAAACAAGCTTTGTGATCAAGTATGTGGGCGATGAGCAGGAGAGAAATAGCTTACAGATGAGTGGAATAAACCTAATGAACAAAACATTAAATATTCAAAATGCTCTGATTTCGTTCTGTATCTGGGATGTTAAAGGTGACAGCAGTTCACAAGATCAGCTTCCATTAGCCTGCAAAGATGCAGTGGCAATCTTGTTCATGTTCGATCTCACAAGTCGAAGAACTCTGAACAGTGTTGTTGATTGGTATACGGAAGCGAGGAAATGGAACCAGACAGCCATTCCCATTTTGATAGGAACCAAATTTGACGACTTTGTTCGACTCCCACCCAATTTGCAGTGGACAATTGTTAGTCAGGCAAGAGCTTATGCCAGAGTTATGAAGGCTACTCTATTCTTCTCGAGCTCCATTCACAACATCAATGTCAACAAGATTTTTAAGTTCATAGCAGCCAAGCTGTTTGACATCCCGTGGTCCATTGAGCGGAACCTCACTATTGGAGAGCCGATCATTGACTTCTAA ATGCCCACAACAATTCACAAACCCAACGCCGCTGCTGCTATTCAAACCAATCCCAAATTCCCTCACCTCCCTTCCCTCCTTTTCTCTTCCAAGCTAGCTCATGACGCCACCTCCGCCGCCATGACCAAGCTTTGCCGGAAACTCGTCCGTTGGAGGCTCCTTGAACGGGTCTCCCTTGTCCGTCACTTCTTCCGCCTCGTCTGGGATAGGCTTTTTGCCTGTTCTTCTGGAACAACTCCTAAAAAATACCGCCGCCTCCCCTCCCGTTCTCCACCTCCCCCCACCGACGGTGGCTCCTCGCCGGACCAGCCTACCACTAGCGGTGGCTTCGACTCCGATTTCGATTTCGACTCTGCTGATTTGGTTTCTCTTAAGATTAGTCTCTTGGGAGATTGCCAGATTGGAAAAACAAGCTTTGTGATCAAGTATGTGGGCGATGAGCAGGAGAGAAATAGCTTACAGATGAGTGGAATAAACCTAATGAACAAAACATTAAATATTCAAAATGCTCTGATTTCGTTCTGTATCTGGGATGTTAAAGGTGACAGCAGTTCACAAGATCAGCTTCCATTAGCCTGCAAAGATGCAGTGGCAATCTTGTTCATGTTCGATCTCACAAGTCGAAGAACTCTGAACAGTGTTGTTGATTGGTATACGGAAGCGAGGAAATGGAACCAGACAGCCATTCCCATTTTGATAGGAACCAAATTTGACGACTTTGTTCGACTCCCACCCAATTTGCAGTGGACAATTGTTAGTCAGGCAAGAGCTTATGCCAGAGTTATGAAGGCTACTCTATTCTTCTCGAGCTCCATTCACAACATCAATGTCAACAAGATTTTTAAGTTCATAGCAGCCAAGCTGTTTGACATCCCGTGGTCCATTGAGCGGAACCTCACTATTGGAGAGCCGATCATTGACTTCTAA MPTTIHKPNAAAAIQTNPKFPHLPSLLFSSKLAHDATSAAMTKLCRKLVRWRLLERVSLVRHFFRLVWDRLFACSSGTTPKKYRRLPSRSPPPPTDGGSSPDQPTTSGGFDSDFDFDSADLVSLKISLLGDCQIGKTSFVIKYVGDEQERNSLQMSGINLMNKTLNIQNALISFCIWDVKGDSSSQDQLPLACKDAVAILFMFDLTSRRTLNSVVDWYTEARKWNQTAIPILIGTKFDDFVRLPPNLQWTIVSQARAYARVMKATLFFSSSIHNINVNKIFKFIAAKLFDIPWSIERNLTIGEPIIDF
BLAST of CsaV3_1G044700 vs. NCBI nr
Match: XP_004142559.1 (PREDICTED: septum-promoting GTP-binding protein 1 [Cucumis sativus] >KGN66693.1 hypothetical protein Csa_1G660130 [Cucumis sativus]) HSP 1 Score: 570.1 bits (1468), Expect = 4.6e-159 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. NCBI nr
Match: XP_008454520.1 (PREDICTED: septum-promoting GTP-binding protein 1 isoform X2 [Cucumis melo]) HSP 1 Score: 553.9 bits (1426), Expect = 3.4e-154 Identity = 274/308 (88.96%), Postives = 284/308 (92.21%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. NCBI nr
Match: XP_008454521.1 (PREDICTED: septum-promoting GTP-binding protein 1 isoform X1 [Cucumis melo]) HSP 1 Score: 547.7 bits (1410), Expect = 2.5e-152 Identity = 273/308 (88.64%), Postives = 283/308 (91.88%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. NCBI nr
Match: XP_022976545.1 (septum-promoting GTP-binding protein 1 [Cucurbita maxima]) HSP 1 Score: 488.8 bits (1257), Expect = 1.4e-134 Identity = 253/312 (81.09%), Postives = 269/312 (86.22%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. NCBI nr
Match: XP_023536057.1 (septum-promoting GTP-binding protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 487.3 bits (1253), Expect = 3.9e-134 Identity = 252/311 (81.03%), Postives = 268/311 (86.17%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. TAIR10
Match: AT5G54840.1 (Ras-related small GTP-binding family protein) HSP 1 Score: 323.6 bits (828), Expect = 1.4e-88 Identity = 169/288 (58.68%), Postives = 206/288 (71.53%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. TAIR10
Match: AT3G21700.3 (Ras-related small GTP-binding family protein) HSP 1 Score: 279.6 bits (714), Expect = 2.3e-75 Identity = 166/293 (56.66%), Postives = 214/293 (73.04%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. TAIR10
Match: AT2G44610.1 (Ras-related small GTP-binding family protein) HSP 1 Score: 75.1 bits (183), Expect = 8.5e-14 Identity = 44/169 (26.04%), Postives = 83/169 (49.11%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. TAIR10
Match: AT4G39890.1 (RAB GTPase homolog H1C) HSP 1 Score: 68.6 bits (166), Expect = 7.9e-12 Identity = 37/170 (21.76%), Postives = 80/170 (47.06%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. TAIR10
Match: AT5G65270.1 (RAB GTPase homolog A4A) HSP 1 Score: 68.6 bits (166), Expect = 7.9e-12 Identity = 47/172 (27.33%), Postives = 80/172 (46.51%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. Swiss-Prot
Match: sp|P87027|SPG1_SCHPO (Septum-promoting GTP-binding protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spg1 PE=1 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 4.5e-49 Identity = 90/187 (48.13%), Postives = 129/187 (68.98%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. Swiss-Prot
Match: sp|P38987|TEM1_YEAST (Protein TEM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TEM1 PE=1 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 5.4e-34 Identity = 71/185 (38.38%), Postives = 114/185 (61.62%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. Swiss-Prot
Match: sp|P51154|RB22A_CANLF (Ras-related protein Rab-22A OS=Canis lupus familiaris OX=9615 GN=RAB22A PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 7.3e-15 Identity = 47/168 (27.98%), Postives = 86/168 (51.19%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. Swiss-Prot
Match: sp|Q9UL26|RB22A_HUMAN (Ras-related protein Rab-22A OS=Homo sapiens OX=9606 GN=RAB22A PE=1 SV=2) HSP 1 Score: 82.0 bits (201), Expect = 1.3e-14 Identity = 47/168 (27.98%), Postives = 85/168 (50.60%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. Swiss-Prot
Match: sp|P35285|RB22A_MOUSE (Ras-related protein Rab-22A OS=Mus musculus OX=10090 GN=Rab22a PE=1 SV=2) HSP 1 Score: 82.0 bits (201), Expect = 1.3e-14 Identity = 49/169 (28.99%), Postives = 87/169 (51.48%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. TrEMBL
Match: tr|A0A0A0LY45|A0A0A0LY45_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G660130 PE=4 SV=1) HSP 1 Score: 570.1 bits (1468), Expect = 3.1e-159 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. TrEMBL
Match: tr|A0A1S3BZK2|A0A1S3BZK2_CUCME (septum-promoting GTP-binding protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494916 PE=4 SV=1) HSP 1 Score: 553.9 bits (1426), Expect = 2.3e-154 Identity = 274/308 (88.96%), Postives = 284/308 (92.21%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. TrEMBL
Match: tr|A0A1S3C011|A0A1S3C011_CUCME (septum-promoting GTP-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494916 PE=4 SV=1) HSP 1 Score: 547.7 bits (1410), Expect = 1.6e-152 Identity = 273/308 (88.64%), Postives = 283/308 (91.88%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. TrEMBL
Match: tr|A0A059BVZ2|A0A059BVZ2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F03444 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 1.9e-100 Identity = 189/283 (66.78%), Postives = 225/283 (79.51%), Query Frame = 0
BLAST of CsaV3_1G044700 vs. TrEMBL
Match: tr|A0A2I4DVF1|A0A2I4DVF1_9ROSI (septum-promoting GTP-binding protein 1-like OS=Juglans regia OX=51240 GN=LOC108983812 PE=4 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 8.8e-98 Identity = 185/283 (65.37%), Postives = 220/283 (77.74%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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