CsaV3_1G044660 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G044660
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Pentatricopeptide repeat-containing protein
Location	chr1 : 30081745 .. 30089223 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGGTAATTTCCCAAACTTAGTTCACCACTTCATACTTCGTACGTTCGCCCTGCACTTCCCGTTGGCGACCGCCGCCCTCGCCTTTTCTCGAGCTTCACGGCTACTCAACCCTCTCCCTTTCCATCTCTTTACTGCCCAACCTCCTCCTTTTCTCACCATTTTAAAAATCGGCGGTACCTTCCCCGGTCGCGTCCACGTTTCCGGTATCGAGCTTTCCTTTTTGTTTTTTTGTTTACCATCTGTTTTCATTTAGGCTCTCTTATGATTTCATTCTAGCTCTTAGGATCCTAATTGGATGCTTAAGTTTTTTTTTATCCGAACAAAAACTTTGTCCAAGGATTACTAGCTCCATTGGGAGTGAATTAACAAACTAACGACCTTGAAAGTGGAAACTGATGTCCTCAATTCTTACAAATATCATTGTATTGGGTAACTTGTATTGTTTCTGGACTTTCTGGTTTCAAAGGTTTGAGATATTGTTCTTAATTTTGTAATTCTCAGTTGTTGAAGTGTTATTCTTGTTATCCGAGGGGGTTTATTTTTTCTTCTTTGGATATCTATTTGTTTAATTTTTTTGTTCTGTTAGTTGAAAGTTAGAGTTATGTTGCCGTTCCTGTTTTAATGTTTATGCAATGTTTTATGGATTTTCCTTCTTCATTTTTAACATTCAGGTTGTCTTTGGCTTTTCCTCTGTTGGCATAACGGTCGATCAAGCTATCTTTTTGGATTTTCTCTTCCACAGTTTCTCATACACTATTCTTGGTTCTCTTCAACAACAGAACAATTAATGTGTAAGAAGAGAGCTGCAATTCTTGCTAGACGCTCCTTAATAGCACTATATACTCCACGATCTTCATGTAGCTCTTCAGTCTCAAACAAAGCCCTCAATCTAGTAAGAAATTTAAGTATTGCTTCTGAAAGAGAGGAATGTCAGAATGATAATGGATATCATGCAGATAATTCTTTGCCGAGTTACCAAACCCATGGTGGATCTGTTAGCAGTTACAACCAAAGCCCTGGCTACTATCAGCATCATGCCCAAAGTACTAGTTCGCAATCTAGGCCCCATCAAGACATTTTAGATGGGTTTTATACAGAAAACTCCTTGCAGGGCCTGCACAGGCCATCCACTAGTTCGGTTTATGGGCAAAAACCTGGGGGCAGTTTTGCAAATACTTCTCCTATGCATGAAAGTGCTAGTAGGTCTTATGGACAACACTATAGTGGAGTGCCTCCTAATTCTTGTGGCTTTAATCAGAACCATCATGAGGCTTATAGAGAAACCTTTCAAAATACTCACCATGCCAGCCCAGTGGCTCCAAACGGTAATTTTATTGAAAATGGCTATAAGGGAGGGGTGGCTCAAGATCATAATAGTTACAATGGAAGTACTCCAAGAAATTTTGTTGACATGAATAATAATGTGGTTTGTGGAGTTGATAGGTCTATGTCTCAGAATAATCAACTTGGGCATAGAGAAATTTTTTCTGCATACAATGGATATGGATATAACAATGAAGCAACGCAGCAAAACAATTATGGGGTATCTGGACAAAATTTACATGACAATCCTATGTCAGGACCAAACAATCACATACCCCTCTCAAGACAGTATGAGCAAAATTCTATTCCTCTGCAACATCCACAGGGACAATATCATCAAGGTTCTAGTGTTGAACAATATCAGCCAAACACAGATACTAATCAGAATAGCATGATTGGTACTCAGTTATTAAACAACGTTAATGCTAACGAGGAAATTGGAGAGCCTAAGGATTGCCAGGATGGTGGCCCCCTTGAGAAGCTTGATGAATTTTGCAAGGAAGGTAAATTGAAGGAGGCTGTGCAAATTTTGGAAGTGTTAGAGAAACAACATATTCCTGTTGATCTATCTCGGTATTTAGATTTGATGAATGCATGTGGGGAAGCAAGGTCCCTAGAAGAAGCCAAAGTTGTTTGTAATTACGTAATTAAATCTCAAACCCATGTAAAAGTTAGCACCTATAACAAAATTTTGGAGATGTACTCTAAATGTGGTTCCATGGATGATGCATATACGATATTCAATAAAATGCCTAGCCGCAACATAACATCTTGGGATACTATGATTACGTGGCTTGCGAAGAATGGCCTAGGAGAAGATGCTATTGATCTTTTTTATGAGTTCAAAAAAGCTGGGTTGAGGCCTGATGGAAAAATGTTTATTGGAGTTTTCTCTGCATGTAGTGTCTTGGGAGATGCTGATGAGGGGATGCTGCACTTCGAATCAATGACAAAGAATTATGGCATTACTCCTTCCATGCATCATTATGTTAGTATAGTAGACATGCTTGGAAGTATAGGATTCGTAGATGAAGCTGTGGAGTTCATTGAAAAGATGCCATTGGAGCCCGGGGTAGATATTTGGGAAACAATGATGAATATCTCTAGAGCTCATGGGTTGATGGAGCTTGGTGATCGTTGTTTTGAGCTTGTTGAGCATCTTGATTCTTCTCGCTTAAATGAGCAGTCAAAAGCTGGCCTTCTACCTGTAAAAGCTTCTGACCTTGAAAAAGAGAGAGAGAAGAAAAAATTAGCTAATCGAAATCTTTTAGAAGTGAGGAGCCGAGTACATGAATATCGTGCTGGAGATACTTCTCATCCTGAGAATGACAGGATCTATACCTTGCTTAGGGGTTTGAGGGAACAAATGAAGGAGGCTGGTTACATACCAGAGACTCGTTTTGTACTCCATGATATAGATCAGGAAGCCAAAAATGATGCTCTACTCGGTCATAGTGAGAGGCTTGCTGTTGCATATGGTCTAATCAGTAGCTCAGCCCGCTCACCCATAAGAGTAATTAAGAACCTTCGTGTTTGTGGTGATTGCCATAGTGCACTAAAGATAATTTCAAAAATTGTGGGTCGAGAACTCATCATCCGCGATGCTAAGAGATTTCACCATTTTAAAGATGGATTATGCTCCTGCCGTGATTATTGGTGAAGAAAATGGAAGTTGAGGTATGCCCATATCTTTTTTCTCTCCACTTGCTTTCTTTTTAATACTTAAGTTTTTGTCTGGTATGGACATGTTCACAAATTGCTTTAGTTTCTTACTCCAAGTTCAAACACTCCACAAGGAGAACTAGTTTCTTACTCCAAGTTCAAACACTCCACAAGCAAGGAGATCAAACTTACCTGAAATTTCTTGGCATGCAACCCTGAGTAAAAAATTGTAAAATAATGGTGATGGGCTTTGTCATCTACCAGAGAATTTTCATTGATAGAAAACCCCAATTCTTCAAATATCAAAAACTAATGTGTTGTATCTTGTTTCTCTACTTTAAACTCAATGTACTGCACTAAAAGGACGTAAAAGTCCATTCTACCCCTAAATTAAAGGAATTAAAACTCAAACAAACATATATGGGTCCAATAATAGAATCCAAAAAATAAGGTACGTTTTTCCAAAAGAAAATAAATTACAAAGCTTAGTTGATTCCATCATGTAGCTTCAATTGACTCAAATTATAAATCTTCTGATCAATTGTTGCTTTTGAATCTGCGCAATTGACTTCACTTCCTCTTGAATGTGAGAATTCGATGGTAAAGGTAGTTTTGTTTGGCTCTTGAACGTGTAATTGATCCCAAAGGTAACACAAGGGCGTTCTGGATAATATCATCTTCTCCCCTTTTGAAGGATTCGTCCTCGAATCAAGCTTGTTATCTGCATCAAAAGGAGTTAAAGTCATAATCATTAAAAGTAGCACTCACACCATATTTACCTTTAATGATCAATCTTGTAGGCGTTATCATTGATTTTTTTTCTTCACTTGAAAAGGTCTATCTCCTTTTTGGTTTAACTTCGAATCTCGTTGATGTGGAAATCTTTTCATTCGATGGTGTAAACCAAACCTCCCTCCATAAATATCATGGACTTTTGATGTTGGTTAATCTTCTCGATCTTTGCATTTTGTTTCTCAATCCTTTTTTTAACCTCTTCATGGAGCTCTAGAATTGTGTTCACCTTCTCATTGGTTTGAAAATTTACCACCTCGTTGGAAGGAAAAGACAACAAGTCAATAGGTGTTAAAGGGTTAAAACCATACACAATCTCAAACGGTAAACATTTAGTGACAATATGAACAACCCTGTTGTATGCAAATTCAATAAATGATAGAAGATCCTCCCTAGTTTTGGTATTTTTATCTATTAGAGCCCTAAGCATAGTCACCATCGTCCTATTGACTACTTCAATTTGTTCATCAGTCTAAGGATGACACGTAGTGGAGTGACTAACTTAGTACCAAATTTTCCCCAAAGTATTTTCAAAAAATGACTGAAGAATTTCATATCTCTATCACTAACAATGTTTCTAGGAATGTCATGCAATTTAACTACATCCTTAAAGAACAAGTCGGCCACATATTTCGCATCATTAGTTTTATTACATGCAATAAATGAGCCATGTTGCTTAATCTGTCAACCACCACAAAAATGCTATCCTTCCCTCTCTTAAATCGAGGTAAACCCAACACAAAATCTATTGAAATATCTAACCAAGGTCCACTAGGAGTTGGTGAAGGCAAATACAGTCCATGTGCATGTGGTTTAGATTTAGACTTAGCTTCCCCAACACGGTATATCTCTCACACATCTTACATATATCATGTCTCATTCTAGGCCACTAAAAGGTTCACTCAACATGTCATATGATTTAGTGATCCCAAAATCTCCCATATGGCTTTTTAACTAAAAACTCCTGAGTAGAACTAGTGAGAATGCAAAACTTAGTCTTCCTAAACCCATCAAATAGCATATAATTAGACACGACACATTTTTGCTTGAGATTTTCAACAATAGGTGCAAAATAAATGTCTTTTGAATACAATACTTTAATATGTTCAAATCCAAACAACCTAGTGTGTAGCATGTCTGCAACTACATTTTCTTTACCTTTCTTATACCATATAACGTAAGGAAAAGTTTCAATGAACTTCAACCAGTTTGCATGTCTCCCATTAAACTTTTGTTGGCCTTTTAGGTGTGGTCAGTATGGACAACAAACTCTTTTGGCTACAAGTAATGTTGCCAAGTTTGTAGTGCTCTCACTAAGGCATAAAACTCCTTGTCATATGTAGGATAGTTTAAGGCAGTTCCATTCAACTTCTCACTGAAGTACATCAACGGTCTTTGATCCTACATTAAAATAGCTCCAGTTTCTATTCCATTGGCATCACACTCAATTTCAAATGTTAGTTCAAAATTAGTTAATACAAGTAAAGACGCATTGCATATCTTATCTTTCAAATCATTAAAGGCATGGTCCTCAAACCTTCTTAATAAGTTCATTAAGTGGTGCAACCATGGAACTAAAACCTCTAATAAACCTCCTATAAAAGCCAACTAAGCCATGAAAACTTATAATTTCACTCACATTCTTAGGTGTAGGTCACTCCCTAATTTCTGCAACCTTCTCAGAATCAACTTCCACTCCATTTTTAGAAACTACAAAACCTAGGAAGTTTACCTTTTTCATGCAAAAACAACACTTTTTGAGATTAACATAAAGCTTTTCCCTCCCCTTCAACTACCTATGAGTCTCTATTTGTAGGGCTCGCAATATTAACGATGTCTGGAATTCTCTTAAGGAGCGGTTCATATATAAAGTTGATATATGGAGGAGTATTTCTCTTCAAAGGTGGTAGACTGACCCTTGTGCAGTCAGTGTTGAATAGCCTTCCTTGCTACATGTTCTTCCTTATGCAAGCCTTAGGTGGCGTCATCAATAGAATGGAAAAGATGGTCAGGGAATTTTTCTGGATTGGGGTCAACTAGCGGACTGCCCACCTTGTTAAGTGGGGCACTTCTTCCTGCCTAATCTATGGTGGTCTTGGATTTGGGGCCCTTGGACAAAAGAATATTGCTCTTCTCACAAAATGGTTGTGGAGGTTCTGTAAGGAAGACAATGCTTTGTGGAGGTGTATAATTATGGCCGTTTACAGCTTGGAGGAGAATGGTTGGTCTACTAATGTGCCAAATAGGGGAAAGTTTAATAGACCATGGGCTGATATTTTGAAACATAAGGAGACTTTAAATTTGTGGCTTTTTTGTTGGGAGATGGGAAAAATATTAGATTTTGGACAGATAGTTGGTGTGAGGCTCAACCCCATTCGTAGAAATTCCCAGATGTTTTCTCCTCATCTCTGAATAAGGATGCTTTTATTGCTGATTGTTGGTGAACAGTTAGTCATTCCTGGAATTTGGATCGGGAATTTGGCAATGTAGCTGCTATTTTGGAATTTCTTCATCCGTGAGCTCCAATAGGTGATCGCAGTAGTCTTAATTGGAAGCTTAATGCTTTTGCAAATTTCACTAGGAAGTTGACCTTTCTTAACTTAACTAAAAAATCTTCCACTACCGCCTTACCCTTGAAGCGCAACATTTGGAAGATTAAAATCCCGAAAAGGATTAAATTCTTCTTATGGTCCCTAGCTTATATTCTCACCCATCTATGTGTTGCCTTTGTTTTAATAATGAGACCTTGGACCACTTATTCCTGCATTGTGACTTCATTATGAAAGGCTGGTCTCTGTTGTACAGAGTTTTCAGTCTGGATTTTTGTCTTCCCAGCAAGATCGGTAGTTTGATGCTTGAAGGGCTCAATAGCAAAGTTTTTCATCCGAAGGAGATGTGCTACTCGATCGCTTTTGCGATGCATTTTTGGAATGAGAGAAGTAGTAGAATTTTTTAGGATAAATATAATTCTTTTGGTTGAATCAAATCTTATTTTCTTGAAATAAACATTTTAAATACAAAAAATTTTAGGTTATGATTTTGAAAAATAAAAATTTATAGAATAAATCGACTGTAGATACAATTTGGGATATTTTTTTAATCTAACAATTAGTGGCTAATTAAATTTAAATTTGTTTTGCTATTTTTCCTAACCTAAACACATCTTGCTATTTTTCAAAATAAAAGTTTAAAAGATGCTCTTCAAATTGATCTTAGTTTATTAACAAAAGAGTGGCCTCTAAAACCTTGTAATCATCTCATTGATCTTGTTTGGAATACATGCATTCTTGTTCACAACCTGTTTTATTAGGCACTTTCCAAGTCTCTAACATGTCTCTCCTTCCTCTGGTCTTGTAGAATCACCATTCCCTGGCGCAGTCACCCACACTTGGAGGAGATGAATGCTTGAGAATATATGGAACAAACCGCTGATGGCTTATGCTTTGCTTCTAGAGATCTGATAACAAGCTAATTTATTCTTCATAAATTGCAGCCATTATTTATTGACATCTCTTTATTTACTTAGTAGTGTAGTAACTATTAGGATATCTCCAATTTTGTTGTTGAAGTTAGCAAGAGAAATAGGGATATACAAAACGAATCAAACCAGTAGTCTAAACTAAAATAAGTTGTACCGAAAGATTTATATTTTGTTTTGGCAGTAATATATTGGTCCAATTCTATTTTGTTCTGTTTTTA

mRNA sequence

ATGTGTAAGAAGAGAGCTGCAATTCTTGCTAGACGCTCCTTAATAGCACTATATACTCCACGATCTTCATGTAGCTCTTCAGTCTCAAACAAAGCCCTCAATCTAGTAAGAAATTTAAGTATTGCTTCTGAAAGAGAGGAATGTCAGAATGATAATGGATATCATGCAGATAATTCTTTGCCGAGTTACCAAACCCATGGTGGATCTGTTAGCAGTTACAACCAAAGCCCTGGCTACTATCAGCATCATGCCCAAAGTACTAGTTCGCAATCTAGGCCCCATCAAGACATTTTAGATGGGTTTTATACAGAAAACTCCTTGCAGGGCCTGCACAGGCCATCCACTAGTTCGGTTTATGGGCAAAAACCTGGGGGCAGTTTTGCAAATACTTCTCCTATGCATGAAAGTGCTAGTAGGTCTTATGGACAACACTATAGTGGAGTGCCTCCTAATTCTTGTGGCTTTAATCAGAACCATCATGAGGCTTATAGAGAAACCTTTCAAAATACTCACCATGCCAGCCCAGTGGCTCCAAACGGTAATTTTATTGAAAATGGCTATAAGGGAGGGGTGGCTCAAGATCATAATAGTTACAATGGAAGTACTCCAAGAAATTTTGTTGACATGAATAATAATGTGGTTTGTGGAGTTGATAGGTCTATGTCTCAGAATAATCAACTTGGGCATAGAGAAATTTTTTCTGCATACAATGGATATGGATATAACAATGAAGCAACGCAGCAAAACAATTATGGGGTATCTGGACAAAATTTACATGACAATCCTATGTCAGGACCAAACAATCACATACCCCTCTCAAGACAGTATGAGCAAAATTCTATTCCTCTGCAACATCCACAGGGACAATATCATCAAGGTTCTAGTGTTGAACAATATCAGCCAAACACAGATACTAATCAGAATAGCATGATTGGTACTCAGTTATTAAACAACGTTAATGCTAACGAGGAAATTGGAGAGCCTAAGGATTGCCAGGATGGTGGCCCCCTTGAGAAGCTTGATGAATTTTGCAAGGAAGGTAAATTGAAGGAGGCTGTGCAAATTTTGGAAGTGTTAGAGAAACAACATATTCCTGTTGATCTATCTCGGTATTTAGATTTGATGAATGCATGTGGGGAAGCAAGGTCCCTAGAAGAAGCCAAAGTTGTTTGTAATTACGTAATTAAATCTCAAACCCATGTAAAAGTTAGCACCTATAACAAAATTTTGGAGATGTACTCTAAATGTGGTTCCATGGATGATGCATATACGATATTCAATAAAATGCCTAGCCGCAACATAACATCTTGGGATACTATGATTACGTGGCTTGCGAAGAATGGCCTAGGAGAAGATGCTATTGATCTTTTTTATGAGTTCAAAAAAGCTGGGTTGAGGCCTGATGGAAAAATGTTTATTGGAGTTTTCTCTGCATGTAGTGTCTTGGGAGATGCTGATGAGGGGATGCTGCACTTCGAATCAATGACAAAGAATTATGGCATTACTCCTTCCATGCATCATTATGTTAGTATAGTAGACATGCTTGGAAGTATAGGATTCGTAGATGAAGCTGTGGAGTTCATTGAAAAGATGCCATTGGAGCCCGGGGTAGATATTTGGGAAACAATGATGAATATCTCTAGAGCTCATGGGTTGATGGAGCTTGGTGATCGTTGTTTTGAGCTTGTTGAGCATCTTGATTCTTCTCGCTTAAATGAGCAGTCAAAAGCTGGCCTTCTACCTGTAAAAGCTTCTGACCTTGAAAAAGAGAGAGAGAAGAAAAAATTAGCTAATCGAAATCTTTTAGAAGTGAGGAGCCGAGTACATGAATATCGTGCTGGAGATACTTCTCATCCTGAGAATGACAGGATCTATACCTTGCTTAGGGGTTTGAGGGAACAAATGAAGGAGGCTGGTTACATACCAGAGACTCGTTTTGTACTCCATGATATAGATCAGGAAGCCAAAAATGATGCTCTACTCGGTCATAGTGAGAGGCTTGCTGTTGCATATGGTCTAATCAGTAGCTCAGCCCGCTCACCCATAAGAGTAATTAAGAACCTTCGTGTTTGTGGTGATTGCCATAGTGCACTAAAGATAATTTCAAAAATTGTGGGTCGAGAACTCATCATCCGCGATGCTAAGAGATTTCACCATTTTAAAGATGGATTATGCTCCTGCCGTGATTATTGGTGA

Coding sequence (CDS)

ATGTGTAAGAAGAGAGCTGCAATTCTTGCTAGACGCTCCTTAATAGCACTATATACTCCACGATCTTCATGTAGCTCTTCAGTCTCAAACAAAGCCCTCAATCTAGTAAGAAATTTAAGTATTGCTTCTGAAAGAGAGGAATGTCAGAATGATAATGGATATCATGCAGATAATTCTTTGCCGAGTTACCAAACCCATGGTGGATCTGTTAGCAGTTACAACCAAAGCCCTGGCTACTATCAGCATCATGCCCAAAGTACTAGTTCGCAATCTAGGCCCCATCAAGACATTTTAGATGGGTTTTATACAGAAAACTCCTTGCAGGGCCTGCACAGGCCATCCACTAGTTCGGTTTATGGGCAAAAACCTGGGGGCAGTTTTGCAAATACTTCTCCTATGCATGAAAGTGCTAGTAGGTCTTATGGACAACACTATAGTGGAGTGCCTCCTAATTCTTGTGGCTTTAATCAGAACCATCATGAGGCTTATAGAGAAACCTTTCAAAATACTCACCATGCCAGCCCAGTGGCTCCAAACGGTAATTTTATTGAAAATGGCTATAAGGGAGGGGTGGCTCAAGATCATAATAGTTACAATGGAAGTACTCCAAGAAATTTTGTTGACATGAATAATAATGTGGTTTGTGGAGTTGATAGGTCTATGTCTCAGAATAATCAACTTGGGCATAGAGAAATTTTTTCTGCATACAATGGATATGGATATAACAATGAAGCAACGCAGCAAAACAATTATGGGGTATCTGGACAAAATTTACATGACAATCCTATGTCAGGACCAAACAATCACATACCCCTCTCAAGACAGTATGAGCAAAATTCTATTCCTCTGCAACATCCACAGGGACAATATCATCAAGGTTCTAGTGTTGAACAATATCAGCCAAACACAGATACTAATCAGAATAGCATGATTGGTACTCAGTTATTAAACAACGTTAATGCTAACGAGGAAATTGGAGAGCCTAAGGATTGCCAGGATGGTGGCCCCCTTGAGAAGCTTGATGAATTTTGCAAGGAAGGTAAATTGAAGGAGGCTGTGCAAATTTTGGAAGTGTTAGAGAAACAACATATTCCTGTTGATCTATCTCGGTATTTAGATTTGATGAATGCATGTGGGGAAGCAAGGTCCCTAGAAGAAGCCAAAGTTGTTTGTAATTACGTAATTAAATCTCAAACCCATGTAAAAGTTAGCACCTATAACAAAATTTTGGAGATGTACTCTAAATGTGGTTCCATGGATGATGCATATACGATATTCAATAAAATGCCTAGCCGCAACATAACATCTTGGGATACTATGATTACGTGGCTTGCGAAGAATGGCCTAGGAGAAGATGCTATTGATCTTTTTTATGAGTTCAAAAAAGCTGGGTTGAGGCCTGATGGAAAAATGTTTATTGGAGTTTTCTCTGCATGTAGTGTCTTGGGAGATGCTGATGAGGGGATGCTGCACTTCGAATCAATGACAAAGAATTATGGCATTACTCCTTCCATGCATCATTATGTTAGTATAGTAGACATGCTTGGAAGTATAGGATTCGTAGATGAAGCTGTGGAGTTCATTGAAAAGATGCCATTGGAGCCCGGGGTAGATATTTGGGAAACAATGATGAATATCTCTAGAGCTCATGGGTTGATGGAGCTTGGTGATCGTTGTTTTGAGCTTGTTGAGCATCTTGATTCTTCTCGCTTAAATGAGCAGTCAAAAGCTGGCCTTCTACCTGTAAAAGCTTCTGACCTTGAAAAAGAGAGAGAGAAGAAAAAATTAGCTAATCGAAATCTTTTAGAAGTGAGGAGCCGAGTACATGAATATCGTGCTGGAGATACTTCTCATCCTGAGAATGACAGGATCTATACCTTGCTTAGGGGTTTGAGGGAACAAATGAAGGAGGCTGGTTACATACCAGAGACTCGTTTTGTACTCCATGATATAGATCAGGAAGCCAAAAATGATGCTCTACTCGGTCATAGTGAGAGGCTTGCTGTTGCATATGGTCTAATCAGTAGCTCAGCCCGCTCACCCATAAGAGTAATTAAGAACCTTCGTGTTTGTGGTGATTGCCATAGTGCACTAAAGATAATTTCAAAAATTGTGGGTCGAGAACTCATCATCCGCGATGCTAAGAGATTTCACCATTTTAAAGATGGATTATGCTCCTGCCGTGATTATTGGTGA

Protein sequence

MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSIASEREECQNDNGYHADNSLPSYQTHGGSVSSYNQSPGYYQHHAQSTSSQSRPHQDILDGFYTENSLQGLHRPSTSSVYGQKPGGSFANTSPMHESASRSYGQHYSGVPPNSCGFNQNHHEAYRETFQNTHHASPVAPNGNFIENGYKGGVAQDHNSYNGSTPRNFVDMNNNVVCGVDRSMSQNNQLGHREIFSAYNGYGYNNEATQQNNYGVSGQNLHDNPMSGPNNHIPLSRQYEQNSIPLQHPQGQYHQGSSVEQYQPNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQDGGPLEKLDEFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVKVSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPVKASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW

Homology

[Close]

BLAST of CsaV3_1G044660 vs. NCBI nr
Match: XP_011660234.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucumis sativus] >KGN66689.1 hypothetical protein Csa_1G659600 [Cucumis sativus])

HSP 1 Score: 1470.3 bits (3805), Expect = 0.0e+00
Identity = 731/731 (100.00%), Postives = 731/731 (100.00%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSIASEREECQNDNGYHADNSL 60
           MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSIASEREECQNDNGYHADNSL
Sbjct: 1   MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSIASEREECQNDNGYHADNSL 60

Query: 61  PSYQTHGGSVSSYNQSPGYYQHHAQSTSSQSRPHQDILDGFYTENSLQGLHRPSTSSVYG 120
           PSYQTHGGSVSSYNQSPGYYQHHAQSTSSQSRPHQDILDGFYTENSLQGLHRPSTSSVYG
Sbjct: 61  PSYQTHGGSVSSYNQSPGYYQHHAQSTSSQSRPHQDILDGFYTENSLQGLHRPSTSSVYG 120

Query: 121 QKPGGSFANTSPMHESASRSYGQHYSGVPPNSCGFNQNHHEAYRETFQNTHHASPVAPNG 180
           QKPGGSFANTSPMHESASRSYGQHYSGVPPNSCGFNQNHHEAYRETFQNTHHASPVAPNG
Sbjct: 121 QKPGGSFANTSPMHESASRSYGQHYSGVPPNSCGFNQNHHEAYRETFQNTHHASPVAPNG 180

Query: 181 NFIENGYKGGVAQDHNSYNGSTPRNFVDMNNNVVCGVDRSMSQNNQLGHREIFSAYNGYG 240
           NFIENGYKGGVAQDHNSYNGSTPRNFVDMNNNVVCGVDRSMSQNNQLGHREIFSAYNGYG
Sbjct: 181 NFIENGYKGGVAQDHNSYNGSTPRNFVDMNNNVVCGVDRSMSQNNQLGHREIFSAYNGYG 240

Query: 241 YNNEATQQNNYGVSGQNLHDNPMSGPNNHIPLSRQYEQNSIPLQHPQGQYHQGSSVEQYQ 300
           YNNEATQQNNYGVSGQNLHDNPMSGPNNHIPLSRQYEQNSIPLQHPQGQYHQGSSVEQYQ
Sbjct: 241 YNNEATQQNNYGVSGQNLHDNPMSGPNNHIPLSRQYEQNSIPLQHPQGQYHQGSSVEQYQ 300

Query: 301 PNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQDGGPLEKLDEFCKEGKLKEAVQILEVLE 360
           PNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQDGGPLEKLDEFCKEGKLKEAVQILEVLE
Sbjct: 301 PNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQDGGPLEKLDEFCKEGKLKEAVQILEVLE 360

Query: 361 KQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVKVSTYNKILEMYSKCGSMD 420
           KQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVKVSTYNKILEMYSKCGSMD
Sbjct: 361 KQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVKVSTYNKILEMYSKCGSMD 420

Query: 421 DAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKAGLRPDGKMFIGVFSACS 480
           DAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKAGLRPDGKMFIGVFSACS
Sbjct: 421 DAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKAGLRPDGKMFIGVFSACS 480

Query: 481 VLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVDEAVEFIEKMPLEPGVDIW 540
           VLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVDEAVEFIEKMPLEPGVDIW
Sbjct: 481 VLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVDEAVEFIEKMPLEPGVDIW 540

Query: 541 ETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPVKASDLEKEREKKKLANRN 600
           ETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPVKASDLEKEREKKKLANRN
Sbjct: 541 ETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPVKASDLEKEREKKKLANRN 600

Query: 601 LLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEAKNDAL 660
           LLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEAKNDAL
Sbjct: 601 LLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEAKNDAL 660

Query: 661 LGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 720
           LGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF
Sbjct: 661 LGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 720

Query: 721 KDGLCSCRDYW 732
           KDGLCSCRDYW
Sbjct: 721 KDGLCSCRDYW 731

[Close]

BLAST of CsaV3_1G044660 vs. NCBI nr
Match: XP_008443720.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Cucumis melo] >XP_008443721.1 PREDICTED: pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Cucumis melo] >XP_008443722.1 PREDICTED: pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Cucumis melo] >XP_008443723.1 PREDICTED: pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Cucumis melo] >XP_008443724.1 PREDICTED: pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Cucumis melo])

HSP 1 Score: 1252.7 bits (3240), Expect = 0.0e+00
Identity = 642/748 (85.83%), Postives = 661/748 (88.37%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSIASEREECQNDNGYHADNSL 60
           MCKK+AAILARRSLIALYT RSSCSSSVS+KALNLVRNLSIASEREECQ+DNGYHADNSL
Sbjct: 1   MCKKKAAILARRSLIALYTARSSCSSSVSHKALNLVRNLSIASEREECQDDNGYHADNSL 60

Query: 61  PSYQTHGGSVSSYNQSPGYYQHHAQSTSSQSRPHQDILDGFYTENSLQGLHRPSTSSVYG 120
            SYQTHGGSVSSYNQSPGYYQHHAQSTS QSRPHQDILDGFYT NSLQG  RPSTSS Y 
Sbjct: 61  RSYQTHGGSVSSYNQSPGYYQHHAQSTSLQSRPHQDILDGFYTGNSLQGPDRPSTSSAYR 120

Query: 121 QKPGGSFANTSPMHESASRSYGQHYSGVPPNSCGFNQNHHEAYRETFQNTHHASPVAPNG 180
           QKPG SFANTS MHE ASRSYGQHYSG+PPNSCGFN+NHHEA RET+QNTHH SPVAPNG
Sbjct: 121 QKPGSSFANTSHMHEIASRSYGQHYSGMPPNSCGFNENHHEACRETYQNTHHTSPVAPNG 180

Query: 181 NFIENGYKGGVAQDHNSYNGSTPRNFVDMNNNVVCGVDRSMSQNNQLGHREIFSAYNGYG 240
           NFIENGY G VAQDHNSYNG+TPRNFV+++NNVV  VDRS S NNQLG REIFSAYNGYG
Sbjct: 181 NFIENGYNGVVAQDHNSYNGNTPRNFVEISNNVVREVDRSTSPNNQLGPREIFSAYNGYG 240

Query: 241 YNNEATQQNNYGVSGQN-----------------LHDNPMSGPNNHIPLSRQYEQNSIPL 300
           Y+NEATQQN YG+SGQN                  H NPMSG                  
Sbjct: 241 YSNEATQQNIYGISGQNSWGTWRESKQYLHGTGLKHHNPMSGXXXXXXXXXXXXXXXXXX 300

Query: 301 QHPQGQYHQGSSVEQYQPNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQDGGPLEKLDEF 360
                            PN DTNQN MIG Q+L NVNANEEIG+ +D Q GGPLEKLDEF
Sbjct: 301 XXXXXXXXXXXXXXXXXPNPDTNQNYMIGNQVLYNVNANEEIGKTRDRQQGGPLEKLDEF 360

Query: 361 CKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVKV 420
           CKEG LKEAV+ILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAK VCNYVIKSQTHVKV
Sbjct: 361 CKEGNLKEAVEILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKAVCNYVIKSQTHVKV 420

Query: 421 STYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKA 480
           STYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKA
Sbjct: 421 STYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKA 480

Query: 481 GLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVDE 540
           GLRPDGKMFIGVFSACSVLGD DEGMLHFESMTKNYGITPSMHHYVSIVDMLGS GFVDE
Sbjct: 481 GLRPDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGITPSMHHYVSIVDMLGSTGFVDE 540

Query: 541 AVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPVK 600
           A+EFIEKMPLEPGVDIWETMMNI+RAHGLMELGDRCFELVEHLD SRLNEQSKAGLLP+K
Sbjct: 541 ALEFIEKMPLEPGVDIWETMMNIARAHGLMELGDRCFELVEHLDPSRLNEQSKAGLLPIK 600

Query: 601 ASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPE 660
           ASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPE
Sbjct: 601 ASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPE 660

Query: 661 TRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISK 720
           TRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISK
Sbjct: 661 TRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISK 720

Query: 721 IVGRELIIRDAKRFHHFKDGLCSCRDYW 732
           IVGRELIIRDAKRFHHFKDGLCSCRDYW
Sbjct: 721 IVGRELIIRDAKRFHHFKDGLCSCRDYW 748

[Close]

BLAST of CsaV3_1G044660 vs. NCBI nr
Match: XP_022139059.1 (pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Momordica charantia] >XP_022139061.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Momordica charantia] >XP_022139062.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Momordica charantia])

HSP 1 Score: 1008.4 bits (2606), Expect = 1.2e-290
Identity = 537/750 (71.60%), Postives = 602/750 (80.27%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSIASEREECQNDNGYHAD-NS 60
           M KKRAAILARRS+IAL   RSSCSS VSNK LNL+RNLSI+SEREE QNDNGYHAD   
Sbjct: 1   MSKKRAAILARRSVIALCNARSSCSSYVSNKPLNLLRNLSISSEREEYQNDNGYHADXXX 60

Query: 61  LPSYQTHGGSVSSYNQSPGYYQHHAQSTSSQSRPHQDILDGFYTENSLQGLHRPSTSSVY 120
                                   + S  S SRP+Q+ LDGFYTE+  +G HRPSTSSVY
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXQSASLKSSSRPYQENLDGFYTEDLTRGQHRPSTSSVY 120

Query: 121 GQKPGGSFANTSPMHESASRSYGQHYSGVPPNSCGFNQNHHEAYRETFQNTHHASPVAPN 180
           GQ PG  F NTSPMHE+ASRS       +P  S GFNQNH+EA+RET++NTH+A+ VA N
Sbjct: 121 GQAPGSGFTNTSPMHENASRSC------LPTTSYGFNQNHYEAFRETYENTHNANLVAHN 180

Query: 181 GNFIENGY-KGGVAQDHNSYNGSTPRNFVDMNNNVVCGVDRSMSQNNQLGHREIFSAYNG 240
           GNFI +G  KG +AQD  SYN  +      ++ N V G DRS+SQN  L HRE  +AY+ 
Sbjct: 181 GNFIHHGLNKGMMAQDLKSYNADS-----QISYNEVRGDDRSLSQNVLLEHRENLTAYS- 240

Query: 241 YGYNNEATQQNNYGVSGQNL-----------------HDNPMSGPNNHIPLSRQYEQNSI 300
            G+NN   ++N  GV GQ+                  + NP SGPNN IP+S   EQNSI
Sbjct: 241 -GFNNGVPRENGNGVYGQSSWGTSMESRQYKHVTGLNYHNPTSGPNNQIPISGHCEQNSI 300

Query: 301 PLQHPQGQYHQGSSVEQYQPNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQDGGPLEKLD 360
             Q+ Q Q  QG++VEQYQP+ +T Q+SM+ TQL+NN+NA++E G  KD Q+G  +E+LD
Sbjct: 301 SQQYLQQQCQQGATVEQYQPSPNTIQSSMMDTQLVNNINADKETGVTKDHQNGDTIEELD 360

Query: 361 EFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHV 420
           EFCKEGKLKEAVQ+LE LEKQHI VDL RYL LMNAC EARSLEEAKVVC+Y+ +S + +
Sbjct: 361 EFCKEGKLKEAVQVLEALEKQHILVDLPRYLQLMNACAEARSLEEAKVVCDYISRSHSPL 420

Query: 421 KVSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFK 480
           KVSTYNKILEMYSKCGSM DAYTIFN MP+RN+TSWDTMITWLAKNGLGEDAIDLFYEFK
Sbjct: 421 KVSTYNKILEMYSKCGSMGDAYTIFNNMPNRNLTSWDTMITWLAKNGLGEDAIDLFYEFK 480

Query: 481 KAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFV 540
           KAGL+PDGKMFIG+FSACSVLGD DEGMLH ESMTKNYGI PSMHHYVSIVDMLGS+G+V
Sbjct: 481 KAGLKPDGKMFIGLFSACSVLGDIDEGMLHLESMTKNYGIIPSMHHYVSIVDMLGSVGYV 540

Query: 541 DEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLP 600
           DEA+EFIEKMPLEPGV+IWE MMNISRAHG MELGDRCFELVE LD SRLNE+SKAGLLP
Sbjct: 541 DEALEFIEKMPLEPGVEIWEMMMNISRAHGFMELGDRCFELVEQLDPSRLNEESKAGLLP 600

Query: 601 VKASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYI 660
           V+ASDL KEREKKKLAN+NLLEVRSRVHEYRAGDTSHPEND+IYTLLRGLREQMKEAGYI
Sbjct: 601 VRASDLAKEREKKKLANQNLLEVRSRVHEYRAGDTSHPENDKIYTLLRGLREQMKEAGYI 660

Query: 661 PETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKII 720
           PETRFVLHDIDQE KNDALL HSERLAVAYGLISSSAR+PIRVIKNLRVCGDCH+ALKII
Sbjct: 661 PETRFVLHDIDQEGKNDALLAHSERLAVAYGLISSSARAPIRVIKNLRVCGDCHNALKII 720

Query: 721 SKIVGRELIIRDAKRFHHFKDGLCSCRDYW 732
           SKIVGRELI+RDAKRFHHFKDGLCSCRDYW
Sbjct: 721 SKIVGRELIMRDAKRFHHFKDGLCSCRDYW 737

[Close]

BLAST of CsaV3_1G044660 vs. NCBI nr
Match: XP_022994138.1 (pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita maxima] >XP_022994146.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita maxima] >XP_022994152.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita maxima] >XP_022994161.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita maxima])

HSP 1 Score: 889.0 bits (2296), Expect = 1.1e-254
Identity = 498/749 (66.49%), Postives = 521/749 (69.56%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSIASEREECQNDNGYHADNSL 60
           MCKKRAAILARRSLIAL   RSSCSSSVSNKALN VRNLSIASEREE QNDNGYHADNS 
Sbjct: 1   MCKKRAAILARRSLIALCNARSSCSSSVSNKALNQVRNLSIASEREEYQNDNGYHADNSX 60

Query: 61  PSYQTHGGSVSSYNQSPGYYQHHAQSTSSQSR-PHQDILDGFYTENSLQGLHRPSTSSVY 120
                                         S  P+Q+IL                     
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSWPNQNIL--------------------- 120

Query: 121 GQKPGGSFANTSPMHESASRSYGQHYSGVPPNSCGFNQNHHEAYRETFQNTHHASPVAPN 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 GNFIENGYKGGVAQDHNSYNGSTPRNFVDMNNNVVCGVDRSMSQNNQLGHREIFSAYNGY 240
                                                          L  RE  +AYN  
Sbjct: 181 -----------------------------------------------LERRENLTAYN-- 240

Query: 241 GYNNEATQQNNYGVSGQNL-----------------HDNPMSGPNNHIPLSRQYEQNSIP 300
           G+NN   QQNNY VSGQN                  + N M G NNHIP+SRQYEQNS+ 
Sbjct: 241 GFNNGELQQNNYEVSGQNSWGTQMESRQFVHGNSLNYHNSMPGLNNHIPVSRQYEQNSMS 300

Query: 301 LQHPQGQYHQGSSVEQYQPNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQDGGPLEKLDE 360
             HPQGQY QG SVE YQPN DT Q+  IGTQ+LNN NA+EEIG  KD   GG LE+LDE
Sbjct: 301 QPHPQGQYQQGGSVELYQPNPDTIQSRTIGTQVLNNTNADEEIGVTKDNPYGGTLEELDE 360

Query: 361 FCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVK 420
           FC+EGKLKEAVQILE+LEKQ+IPVDLSRYL+LMNACGEARSLEEAKVVC YVIKSQT +K
Sbjct: 361 FCREGKLKEAVQILEMLEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCKYVIKSQTPLK 420

Query: 421 VSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKK 480
           VSTYNKILEMYSKCGSM+DAY IFNKMPSRN+TSWDTMITWLAKNGLGEDAIDLFYEFKK
Sbjct: 421 VSTYNKILEMYSKCGSMNDAYLIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYEFKK 480

Query: 481 AGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVD 540
            GLR DGKMFIGVFSACSVLGD DEGMLHFESMTKNYGITPSMHHYVSI+DMLGS+G+VD
Sbjct: 481 TGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGITPSMHHYVSIIDMLGSVGYVD 540

Query: 541 EAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPV 600
           EA+EFIE MP EPGVDIWETMMNISRAHGLMELGDRCFELVE LD SRLNEQSKAG LP+
Sbjct: 541 EALEFIENMPFEPGVDIWETMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPI 600

Query: 601 KASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIP 660
           KASDL KEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIP
Sbjct: 601 KASDLAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIP 619

Query: 661 ETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIIS 720
           ETRFVLHDIDQE KNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIIS
Sbjct: 661 ETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIIS 619

Query: 721 KIVGRELIIRDAKRFHHFKDGLCSCRDYW 732
           KIVGRELIIRDAKRFHHFKDGLCSCRDYW
Sbjct: 721 KIVGRELIIRDAKRFHHFKDGLCSCRDYW 619

[Close]

BLAST of CsaV3_1G044660 vs. NCBI nr
Match: XP_023530381.1 (pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530394.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530402.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530411.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530418.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023530427.1 pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 865.9 bits (2236), Expect = 9.7e-248
Identity = 489/749 (65.29%), Postives = 510/749 (68.09%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSIASEREECQNDNGYHADNSL 60
           MCKKRAAILARRSLIAL   RSSCSSSVSNK LN VRNLSIASEREE QNDNGYHADNS 
Sbjct: 1   MCKKRAAILARRSLIALCNIRSSCSSSVSNKVLNQVRNLSIASEREEYQNDNGYHADNSX 60

Query: 61  PSYQTHGGSVSSYNQSPGYYQHHAQSTSS-QSRPHQDILDGFYTENSLQGLHRPSTSSVY 120
                                          S P+Q+IL                     
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXISSWPNQNIL--------------------- 120

Query: 121 GQKPGGSFANTSPMHESASRSYGQHYSGVPPNSCGFNQNHHEAYRETFQNTHHASPVAPN 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 GNFIENGYKGGVAQDHNSYNGSTPRNFVDMNNNVVCGVDRSMSQNNQLGHREIFSAYNGY 240
                                                          L  RE  +AYN  
Sbjct: 181 -----------------------------------------------LERRENLTAYN-- 240

Query: 241 GYNNEATQQNNYGVSGQNL-----------------HDNPMSGPNNHIPLSRQYEQNSIP 300
           G+NN   QQNNY VSGQN                  + N M G NNHIP+SRQYEQNS+ 
Sbjct: 241 GFNNGELQQNNYEVSGQNSWGTQIESRQFVHGNSLNYHNSMPGLNNHIPISRQYEQNSMS 300

Query: 301 LQHPQGQYHQGSSVEQYQPNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQDGGPLEKLDE 360
             HPQGQY QG SVE YQPN DT Q+  IGTQ+L N NA+EEIG  KD   GG LE+LDE
Sbjct: 301 QPHPQGQYQQGGSVELYQPNPDTIQSRTIGTQVLKNTNADEEIGVTKDNPYGGTLEELDE 360

Query: 361 FCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVK 420
           FC+EGKLKEAVQILE+LEKQ+IPVDLSRYL+LMNACGEARSLEEAKVVCNYVIKSQT   
Sbjct: 361 FCREGKLKEAVQILEMLEKQNIPVDLSRYLNLMNACGEARSLEEAKVVCNYVIKSQTPXX 420

Query: 421 VSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKK 480
                 ILEMYSKCGSMDDAY IFNKMPSRN+TSWDTMITWLAKNGLGEDAIDLFYEFKK
Sbjct: 421 XXXXXXILEMYSKCGSMDDAYMIFNKMPSRNLTSWDTMITWLAKNGLGEDAIDLFYEFKK 480

Query: 481 AGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVD 540
            GLR DGKMFIGVFSACSVLGD DEGMLHFESMTKNYGI PSM HYVSI+DMLGS+G+VD
Sbjct: 481 TGLRIDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGIIPSMQHYVSIIDMLGSVGYVD 540

Query: 541 EAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPV 600
           EA+EFIEKMP EPGVDIWE MMNISRAHGLMELGDRCFELVE LD SRLNEQSKAG LP+
Sbjct: 541 EALEFIEKMPFEPGVDIWEAMMNISRAHGLMELGDRCFELVEQLDPSRLNEQSKAGHLPI 600

Query: 601 KASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIP 660
           KASDL KEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIP
Sbjct: 601 KASDLAKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIP 619

Query: 661 ETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIIS 720
           ETRFVLHDIDQE KNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIIS
Sbjct: 661 ETRFVLHDIDQEGKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIIS 619

Query: 721 KIVGRELIIRDAKRFHHFKDGLCSCRDYW 732
           KIVGRELIIRDAKRFHHFKDGLCSCRDYW
Sbjct: 721 KIVGRELIIRDAKRFHHFKDGLCSCRDYW 619

[Close]

BLAST of CsaV3_1G044660 vs. TAIR10
Match: AT2G25580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 454.5 bits (1168), Expect = 1.2e-127
Identity = 216/395 (54.68%), Postives = 291/395 (73.67%), Query Frame = 0


Query: 337 LEKLDEFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIK 396
           +E+ D FCK GK+K+A+  +++L   +  VDLSR L L   CGEA  L+EAK V   +  
Sbjct: 223 IEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISA 282

Query: 397 SQTHVKVSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDL 456
           S +H+ +S+ + +LEMYS CG  ++A ++F KM  +N+ +W  +I   AKNG GEDAID+
Sbjct: 283 SVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDM 342

Query: 457 FYEFKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLG 516
           F  FK+ G  PDG++F G+F AC +LGD DEG+LHFESM+++YGI PS+  YVS+V+M  
Sbjct: 343 FSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYA 402

Query: 517 SIGFVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSK 576
             GF+DEA+EF+E+MP+EP VD+WET+MN+SR HG +ELGD C E+VE LD +RLN+QS+
Sbjct: 403 LPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSR 462

Query: 577 AGLLPVKASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMK 636
            G +PVKASD+EKE  KK+  +  L  V+S + E+RAGDT+ PEND ++ LLR L+  M 
Sbjct: 463 EGFIPVKASDVEKESLKKR--SGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMV 522

Query: 637 EAGYIPETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHS 696
           E GY+ ETR  LHDIDQE+K   LLGHSER+A A  +++S+ R P  VIKNLRVC DCH+
Sbjct: 523 EVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHN 582

Query: 697 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 732
           ALKI+S IVGRE+I RD KRFH  K+G C+C+DYW
Sbjct: 583 ALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615

[Close]

BLAST of CsaV3_1G044660 vs. TAIR10
Match: AT4G32450.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 436.4 bits (1121), Expect = 3.4e-122
Identity = 241/512 (47.07%), Postives = 325/512 (63.48%), Query Frame = 0


Query: 224 NNQLGHREIFSAYNGYGYNNEATQQNNYGVSGQNLHDNPMSGPNNHIPLSRQYEQNSIPL 283
           +N   H    + +NG   +    QQN+Y    Q+L  NP+SG N   P +R Y QN    
Sbjct: 45  DNSSHHIGYVNGFNGGEQSLGGFQQNSY---EQSL--NPVSGQN---PTNRFY-QNGYNR 104

Query: 284 QHPQGQY----HQGSSVEQYQPNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQDGGPLEK 343
               G++    +Q +   Q      +   +  G    NN   N      +D      L++
Sbjct: 105 NQSYGEHSEIINQRNQNWQSSDGCSSYGTTGNGVPQENNTGGNH---FQQDHSGHSSLDE 164

Query: 344 LDEFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQT 403
           LD  C+EGK+K+AV+I++    +   VDL R   +   CG+A++L+EAKVV  ++  S  
Sbjct: 165 LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVG 224

Query: 404 HVKVSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYE 463
              +S YN I+EMYS CGS++DA T+FN MP RN+ +W  +I   AKNG GEDAID F  
Sbjct: 225 ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 284

Query: 464 FKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIG 523
           FK+ G +PDG+MF  +F AC VLGD +EG+LHFESM K YGI P M HYVS+V ML   G
Sbjct: 285 FKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPG 344

Query: 524 FVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGL 583
           ++DEA+ F+E M  EP VD+WET+MN+SR HG + LGDRC ++VE LD+SRLN++SKAGL
Sbjct: 345 YLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGL 404

Query: 584 LPVKASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAG 643
           +PVK+SDL KE+ ++     N       +    AGD S PEN  +Y  L+ L+E M E G
Sbjct: 405 VPVKSSDLVKEKLQRMAKGPNY-----GIRYMAAGDISRPENRELYMALKSLKEHMIEIG 464

Query: 644 YIPETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALK 703
           Y+P ++  LHD+DQE+K++ L  H+ER A     + + ARS IRV+KNLRVC DCH+ALK
Sbjct: 465 YVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALK 524

Query: 704 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 732
           ++SKIVGRELI RDAKRFHH KDG+CSCR+YW
Sbjct: 525 LMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537

[Close]

BLAST of CsaV3_1G044660 vs. TAIR10
Match: AT2G34370.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 360.1 bits (923), Expect = 3.1e-99
Identity = 176/396 (44.44%), Postives = 266/396 (67.17%), Query Frame = 0


Query: 337 LEKLDEFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIK 396
           +E  D  CK+ K++EA++++++LE +   VD  R L L   CGE  +LEEA+VV + +  
Sbjct: 81  IETFDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCI-- 140

Query: 397 SQTHVKVSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDL 456
             T +   +Y+ ++EMYS C S DDA  +FN+MP RN  +W TMI  LAKNG GE AID+
Sbjct: 141 --TPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDM 200

Query: 457 FYEFKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLG 516
           F  F + G +PD ++F  VF AC  +GD +EG+LHFESM ++YG+  SM  YV++++ML 
Sbjct: 201 FTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLA 260

Query: 517 SIGFVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSK 576
           + G +DEA++F+E+M +EP V++WET+MN+    G +ELGDR  EL++ LD+SR++++S 
Sbjct: 261 ACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESN 320

Query: 577 AGLLPVKASDLEKEREKK-KLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQM 636
           AGL+  KASD   E+ K+ +       + + R+HE+RAGDTSH       +  R L+ QM
Sbjct: 321 AGLVAAKASDSAMEKLKELRYCQMIRDDPKKRMHEFRAGDTSHLGT---VSAFRSLKVQM 380

Query: 637 KEAGYIPETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCH 696
            + G++P TR     +++E K + LL  S +LA A+ +I+S AR P+ V++N+R C D H
Sbjct: 381 LDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGH 440

Query: 697 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 732
           +  K+IS I GR LI RD K++H +K+G+CSC+DYW
Sbjct: 441 NTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469

[Close]

BLAST of CsaV3_1G044660 vs. TAIR10
Match: AT1G29710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 345.9 bits (886), Expect = 6.1e-95
Identity = 190/472 (40.25%), Postives = 276/472 (58.47%), Query Frame = 0


Query: 266 PNNHIPLSRQYEQNSIPLQHPQGQYHQGSSVEQYQPNT---DTNQNSMIGTQLLNNVNAN 325
           P++H+ + ++Y  + I              + +Y+ N       QNSM+G Q    V+  
Sbjct: 34  PSHHLHILKKYGSSEIT-----------EMINRYKRNVAGHTLTQNSMVG-QYKTTVS-- 93

Query: 326 EEIGEPKDCQDGGPLEKLDEFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEAR 385
                P   Q+   +E  D  C +G  +EAV++L+ LE +   +DL R L L   CG+  
Sbjct: 94  -----PSVAQN-VTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPE 153

Query: 386 SLEEAKVVCNYVIKSQTHVKVSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMIT 445
           +LE A+VV   +I   +   V   N I+EMYS C S+DDA  +F +MP  N  +   M+ 
Sbjct: 154 ALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMR 213

Query: 446 WLAKNGLGEDAIDLFYEFKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGIT 505
               NG GE+AIDLF  FK+ G +P+G++F  VFS C++ GD  EG L F++M + YGI 
Sbjct: 214 CFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIV 273

Query: 506 PSMHHYVSIVDMLGSIGFVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFEL 565
           PSM HY S+  ML + G +DEA+ F+E+MP+EP VD+WET+MN+SR HG +ELGDRC EL
Sbjct: 274 PSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAEL 333

Query: 566 VEHLDSSRLNEQSKAGLLPVKASDLEKEREKKKLANRNLLEVRSRVHEY---RAGDTSHP 625
           VE LD++RL++ S AGL+  KASD  K+              RS  + Y   R  D+SHP
Sbjct: 334 VEKLDATRLDKVSSAGLVATKASDFVKKEP----------STRSEPYFYSTFRPVDSSHP 393

Query: 626 ENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSAR 685
           + + IY  L  LR Q+KE GY+P+TR+    I      + + G+ E +AV   L+ S  R
Sbjct: 394 QMNIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPR 453

Query: 686 SPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 732
           S I ++ N+R+ GDCH  +K++S I GR++I RDAK +H FK+G+C C + W
Sbjct: 454 SAITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475

[Close]

BLAST of CsaV3_1G044660 vs. TAIR10
Match: AT3G49170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 294.3 bits (752), Expect = 2.1e-79
Identity = 149/405 (36.79%), Postives = 229/405 (56.54%), Query Frame = 0


Query: 340 LDEFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQT 399
           LD  C+    ++A ++L  + ++ + V    +  L++      S+ + + + + V+K   
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505

Query: 400 HVKVSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYE 459
                  N ++ MYSKCGS+D A  +FN M +RN+ SW +MIT  AK+G     ++ F +
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQ 565

Query: 460 FKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIG 519
             + G++P+   ++ + SACS +G   EG  HF SM +++ I P M HY  +VD+L   G
Sbjct: 566 MIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAG 625

Query: 520 FVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGL 579
            + +A EFI  MP +  V +W T +   R H   ELG      +  LD +      +   
Sbjct: 626 LLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSN 685

Query: 580 LPVKASDLEKERE-KKKLANRNL--------LEVRSRVHEYRAGDTSHPENDRIYTLLRG 639
           +   A   E+  E ++K+  RNL        +EV  ++H++  GDT+HP   +IY  L  
Sbjct: 686 IYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDR 745

Query: 640 LREQMKEAGYIPETRFVLHDIDQE----AKNDALLGHSERLAVAYGLISSSARSPIRVIK 699
           L  ++K  GY+P+T  VLH +++E     K   L  HSE++AVA+GLIS+S   P+RV K
Sbjct: 746 LITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFK 805

Query: 700 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 732
           NLRVCGDCH+A+K IS + GRE+++RD  RFHHFKDG CSC DYW
Sbjct: 806 NLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850

[Close]

BLAST of CsaV3_1G044660 vs. Swiss-Prot
Match: sp|Q680H3|PP170_ARATH (Pentatricopeptide repeat-containing protein At2g25580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H75 PE=2 SV=2)

HSP 1 Score: 454.5 bits (1168), Expect = 2.2e-126
Identity = 216/395 (54.68%), Postives = 291/395 (73.67%), Query Frame = 0


Query: 337 LEKLDEFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIK 396
           +E+ D FCK GK+K+A+  +++L   +  VDLSR L L   CGEA  L+EAK V   +  
Sbjct: 223 IEEYDAFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISA 282

Query: 397 SQTHVKVSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDL 456
           S +H+ +S+ + +LEMYS CG  ++A ++F KM  +N+ +W  +I   AKNG GEDAID+
Sbjct: 283 SVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDM 342

Query: 457 FYEFKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLG 516
           F  FK+ G  PDG++F G+F AC +LGD DEG+LHFESM+++YGI PS+  YVS+V+M  
Sbjct: 343 FSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYA 402

Query: 517 SIGFVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSK 576
             GF+DEA+EF+E+MP+EP VD+WET+MN+SR HG +ELGD C E+VE LD +RLN+QS+
Sbjct: 403 LPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSR 462

Query: 577 AGLLPVKASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMK 636
            G +PVKASD+EKE  KK+  +  L  V+S + E+RAGDT+ PEND ++ LLR L+  M 
Sbjct: 463 EGFIPVKASDVEKESLKKR--SGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMV 522

Query: 637 EAGYIPETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHS 696
           E GY+ ETR  LHDIDQE+K   LLGHSER+A A  +++S+ R P  VIKNLRVC DCH+
Sbjct: 523 EVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHN 582

Query: 697 ALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 732
           ALKI+S IVGRE+I RD KRFH  K+G C+C+DYW
Sbjct: 583 ALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615

[Close]

BLAST of CsaV3_1G044660 vs. Swiss-Prot
Match: sp|Q9SUU7|PP346_ARATH (Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H63 PE=2 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 6.2e-121
Identity = 241/512 (47.07%), Postives = 325/512 (63.48%), Query Frame = 0


Query: 224 NNQLGHREIFSAYNGYGYNNEATQQNNYGVSGQNLHDNPMSGPNNHIPLSRQYEQNSIPL 283
           +N   H    + +NG   +    QQN+Y    Q+L  NP+SG N   P +R Y QN    
Sbjct: 45  DNSSHHIGYVNGFNGGEQSLGGFQQNSY---EQSL--NPVSGQN---PTNRFY-QNGYNR 104

Query: 284 QHPQGQY----HQGSSVEQYQPNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQDGGPLEK 343
               G++    +Q +   Q      +   +  G    NN   N      +D      L++
Sbjct: 105 NQSYGEHSEIINQRNQNWQSSDGCSSYGTTGNGVPQENNTGGNH---FQQDHSGHSSLDE 164

Query: 344 LDEFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQT 403
           LD  C+EGK+K+AV+I++    +   VDL R   +   CG+A++L+EAKVV  ++  S  
Sbjct: 165 LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVG 224

Query: 404 HVKVSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYE 463
              +S YN I+EMYS CGS++DA T+FN MP RN+ +W  +I   AKNG GEDAID F  
Sbjct: 225 ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 284

Query: 464 FKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIG 523
           FK+ G +PDG+MF  +F AC VLGD +EG+LHFESM K YGI P M HYVS+V ML   G
Sbjct: 285 FKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPG 344

Query: 524 FVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGL 583
           ++DEA+ F+E M  EP VD+WET+MN+SR HG + LGDRC ++VE LD+SRLN++SKAGL
Sbjct: 345 YLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGL 404

Query: 584 LPVKASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAG 643
           +PVK+SDL KE+ ++     N       +    AGD S PEN  +Y  L+ L+E M E G
Sbjct: 405 VPVKSSDLVKEKLQRMAKGPNY-----GIRYMAAGDISRPENRELYMALKSLKEHMIEIG 464

Query: 644 YIPETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALK 703
           Y+P ++  LHD+DQE+K++ L  H+ER A     + + ARS IRV+KNLRVC DCH+ALK
Sbjct: 465 YVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALK 524

Query: 704 IISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 732
           ++SKIVGRELI RDAKRFHH KDG+CSCR+YW
Sbjct: 525 LMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537

[Close]

BLAST of CsaV3_1G044660 vs. Swiss-Prot
Match: sp|Q8S8Q7|PP183_ARATH (Pentatricopeptide repeat-containing protein At2g34370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H25 PE=2 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.6e-98
Identity = 176/396 (44.44%), Postives = 266/396 (67.17%), Query Frame = 0


Query: 337 LEKLDEFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIK 396
           +E  D  CK+ K++EA++++++LE +   VD  R L L   CGE  +LEEA+VV + +  
Sbjct: 81  IETFDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCI-- 140

Query: 397 SQTHVKVSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDL 456
             T +   +Y+ ++EMYS C S DDA  +FN+MP RN  +W TMI  LAKNG GE AID+
Sbjct: 141 --TPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDM 200

Query: 457 FYEFKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLG 516
           F  F + G +PD ++F  VF AC  +GD +EG+LHFESM ++YG+  SM  YV++++ML 
Sbjct: 201 FTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLA 260

Query: 517 SIGFVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSK 576
           + G +DEA++F+E+M +EP V++WET+MN+    G +ELGDR  EL++ LD+SR++++S 
Sbjct: 261 ACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKESN 320

Query: 577 AGLLPVKASDLEKEREKK-KLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQM 636
           AGL+  KASD   E+ K+ +       + + R+HE+RAGDTSH       +  R L+ QM
Sbjct: 321 AGLVAAKASDSAMEKLKELRYCQMIRDDPKKRMHEFRAGDTSHLGT---VSAFRSLKVQM 380

Query: 637 KEAGYIPETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCH 696
            + G++P TR     +++E K + LL  S +LA A+ +I+S AR P+ V++N+R C D H
Sbjct: 381 LDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTCIDGH 440

Query: 697 SALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 732
           +  K+IS I GR LI RD K++H +K+G+CSC+DYW
Sbjct: 441 NTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469

[Close]

BLAST of CsaV3_1G044660 vs. Swiss-Prot
Match: sp|Q9C6G2|PPR63_ARATH (Pentatricopeptide repeat-containing protein At1g29710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H67 PE=3 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.1e-93
Identity = 190/472 (40.25%), Postives = 276/472 (58.47%), Query Frame = 0


Query: 266 PNNHIPLSRQYEQNSIPLQHPQGQYHQGSSVEQYQPNT---DTNQNSMIGTQLLNNVNAN 325
           P++H+ + ++Y  + I              + +Y+ N       QNSM+G Q    V+  
Sbjct: 34  PSHHLHILKKYGSSEIT-----------EMINRYKRNVAGHTLTQNSMVG-QYKTTVS-- 93

Query: 326 EEIGEPKDCQDGGPLEKLDEFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEAR 385
                P   Q+   +E  D  C +G  +EAV++L+ LE +   +DL R L L   CG+  
Sbjct: 94  -----PSVAQN-VTIETFDSLCIQGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPE 153

Query: 386 SLEEAKVVCNYVIKSQTHVKVSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMIT 445
           +LE A+VV   +I   +   V   N I+EMYS C S+DDA  +F +MP  N  +   M+ 
Sbjct: 154 ALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMR 213

Query: 446 WLAKNGLGEDAIDLFYEFKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGIT 505
               NG GE+AIDLF  FK+ G +P+G++F  VFS C++ GD  EG L F++M + YGI 
Sbjct: 214 CFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIV 273

Query: 506 PSMHHYVSIVDMLGSIGFVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFEL 565
           PSM HY S+  ML + G +DEA+ F+E+MP+EP VD+WET+MN+SR HG +ELGDRC EL
Sbjct: 274 PSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAEL 333

Query: 566 VEHLDSSRLNEQSKAGLLPVKASDLEKEREKKKLANRNLLEVRSRVHEY---RAGDTSHP 625
           VE LD++RL++ S AGL+  KASD  K+              RS  + Y   R  D+SHP
Sbjct: 334 VEKLDATRLDKVSSAGLVATKASDFVKKEP----------STRSEPYFYSTFRPVDSSHP 393

Query: 626 ENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSAR 685
           + + IY  L  LR Q+KE GY+P+TR+    I      + + G+ E +AV   L+ S  R
Sbjct: 394 QMNIIYETLMSLRSQLKEMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPR 453

Query: 686 SPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 732
           S I ++ N+R+ GDCH  +K++S I GR++I RDAK +H FK+G+C C + W
Sbjct: 454 SAITLLTNIRIVGDCHDMMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475

[Close]

BLAST of CsaV3_1G044660 vs. Swiss-Prot
Match: sp|Q5G1T1|PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.8e-78
Identity = 149/405 (36.79%), Postives = 229/405 (56.54%), Query Frame = 0


Query: 340 LDEFCKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQT 399
           LD  C+    ++A ++L  + ++ + V    +  L++      S+ + + + + V+K   
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505

Query: 400 HVKVSTYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYE 459
                  N ++ MYSKCGS+D A  +FN M +RN+ SW +MIT  AK+G     ++ F +
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQ 565

Query: 460 FKKAGLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIG 519
             + G++P+   ++ + SACS +G   EG  HF SM +++ I P M HY  +VD+L   G
Sbjct: 566 MIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAG 625

Query: 520 FVDEAVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGL 579
            + +A EFI  MP +  V +W T +   R H   ELG      +  LD +      +   
Sbjct: 626 LLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSN 685

Query: 580 LPVKASDLEKERE-KKKLANRNL--------LEVRSRVHEYRAGDTSHPENDRIYTLLRG 639
           +   A   E+  E ++K+  RNL        +EV  ++H++  GDT+HP   +IY  L  
Sbjct: 686 IYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDR 745

Query: 640 LREQMKEAGYIPETRFVLHDIDQE----AKNDALLGHSERLAVAYGLISSSARSPIRVIK 699
           L  ++K  GY+P+T  VLH +++E     K   L  HSE++AVA+GLIS+S   P+RV K
Sbjct: 746 LITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFK 805

Query: 700 NLRVCGDCHSALKIISKIVGRELIIRDAKRFHHFKDGLCSCRDYW 732
           NLRVCGDCH+A+K IS + GRE+++RD  RFHHFKDG CSC DYW
Sbjct: 806 NLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850

[Close]

BLAST of CsaV3_1G044660 vs. TrEMBL
Match: tr|A0A0A0M061|A0A0A0M061_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G659600 PE=4 SV=1)

HSP 1 Score: 1470.3 bits (3805), Expect = 0.0e+00
Identity = 731/731 (100.00%), Postives = 731/731 (100.00%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSIASEREECQNDNGYHADNSL 60
           MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSIASEREECQNDNGYHADNSL
Sbjct: 1   MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSIASEREECQNDNGYHADNSL 60

Query: 61  PSYQTHGGSVSSYNQSPGYYQHHAQSTSSQSRPHQDILDGFYTENSLQGLHRPSTSSVYG 120
           PSYQTHGGSVSSYNQSPGYYQHHAQSTSSQSRPHQDILDGFYTENSLQGLHRPSTSSVYG
Sbjct: 61  PSYQTHGGSVSSYNQSPGYYQHHAQSTSSQSRPHQDILDGFYTENSLQGLHRPSTSSVYG 120

Query: 121 QKPGGSFANTSPMHESASRSYGQHYSGVPPNSCGFNQNHHEAYRETFQNTHHASPVAPNG 180
           QKPGGSFANTSPMHESASRSYGQHYSGVPPNSCGFNQNHHEAYRETFQNTHHASPVAPNG
Sbjct: 121 QKPGGSFANTSPMHESASRSYGQHYSGVPPNSCGFNQNHHEAYRETFQNTHHASPVAPNG 180

Query: 181 NFIENGYKGGVAQDHNSYNGSTPRNFVDMNNNVVCGVDRSMSQNNQLGHREIFSAYNGYG 240
           NFIENGYKGGVAQDHNSYNGSTPRNFVDMNNNVVCGVDRSMSQNNQLGHREIFSAYNGYG
Sbjct: 181 NFIENGYKGGVAQDHNSYNGSTPRNFVDMNNNVVCGVDRSMSQNNQLGHREIFSAYNGYG 240

Query: 241 YNNEATQQNNYGVSGQNLHDNPMSGPNNHIPLSRQYEQNSIPLQHPQGQYHQGSSVEQYQ 300
           YNNEATQQNNYGVSGQNLHDNPMSGPNNHIPLSRQYEQNSIPLQHPQGQYHQGSSVEQYQ
Sbjct: 241 YNNEATQQNNYGVSGQNLHDNPMSGPNNHIPLSRQYEQNSIPLQHPQGQYHQGSSVEQYQ 300

Query: 301 PNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQDGGPLEKLDEFCKEGKLKEAVQILEVLE 360
           PNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQDGGPLEKLDEFCKEGKLKEAVQILEVLE
Sbjct: 301 PNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQDGGPLEKLDEFCKEGKLKEAVQILEVLE 360

Query: 361 KQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVKVSTYNKILEMYSKCGSMD 420
           KQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVKVSTYNKILEMYSKCGSMD
Sbjct: 361 KQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVKVSTYNKILEMYSKCGSMD 420

Query: 421 DAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKAGLRPDGKMFIGVFSACS 480
           DAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKAGLRPDGKMFIGVFSACS
Sbjct: 421 DAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKAGLRPDGKMFIGVFSACS 480

Query: 481 VLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVDEAVEFIEKMPLEPGVDIW 540
           VLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVDEAVEFIEKMPLEPGVDIW
Sbjct: 481 VLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVDEAVEFIEKMPLEPGVDIW 540

Query: 541 ETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPVKASDLEKEREKKKLANRN 600
           ETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPVKASDLEKEREKKKLANRN
Sbjct: 541 ETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPVKASDLEKEREKKKLANRN 600

Query: 601 LLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEAKNDAL 660
           LLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEAKNDAL
Sbjct: 601 LLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQEAKNDAL 660

Query: 661 LGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 720
           LGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF
Sbjct: 661 LGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDAKRFHHF 720

Query: 721 KDGLCSCRDYW 732
           KDGLCSCRDYW
Sbjct: 721 KDGLCSCRDYW 731

[Close]

BLAST of CsaV3_1G044660 vs. TrEMBL
Match: tr|A0A1S3B9H3|A0A1S3B9H3_CUCME (pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103487241 PE=4 SV=1)

HSP 1 Score: 1252.7 bits (3240), Expect = 0.0e+00
Identity = 642/748 (85.83%), Postives = 661/748 (88.37%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSIASEREECQNDNGYHADNSL 60
           MCKK+AAILARRSLIALYT RSSCSSSVS+KALNLVRNLSIASEREECQ+DNGYHADNSL
Sbjct: 1   MCKKKAAILARRSLIALYTARSSCSSSVSHKALNLVRNLSIASEREECQDDNGYHADNSL 60

Query: 61  PSYQTHGGSVSSYNQSPGYYQHHAQSTSSQSRPHQDILDGFYTENSLQGLHRPSTSSVYG 120
            SYQTHGGSVSSYNQSPGYYQHHAQSTS QSRPHQDILDGFYT NSLQG  RPSTSS Y 
Sbjct: 61  RSYQTHGGSVSSYNQSPGYYQHHAQSTSLQSRPHQDILDGFYTGNSLQGPDRPSTSSAYR 120

Query: 121 QKPGGSFANTSPMHESASRSYGQHYSGVPPNSCGFNQNHHEAYRETFQNTHHASPVAPNG 180
           QKPG SFANTS MHE ASRSYGQHYSG+PPNSCGFN+NHHEA RET+QNTHH SPVAPNG
Sbjct: 121 QKPGSSFANTSHMHEIASRSYGQHYSGMPPNSCGFNENHHEACRETYQNTHHTSPVAPNG 180

Query: 181 NFIENGYKGGVAQDHNSYNGSTPRNFVDMNNNVVCGVDRSMSQNNQLGHREIFSAYNGYG 240
           NFIENGY G VAQDHNSYNG+TPRNFV+++NNVV  VDRS S NNQLG REIFSAYNGYG
Sbjct: 181 NFIENGYNGVVAQDHNSYNGNTPRNFVEISNNVVREVDRSTSPNNQLGPREIFSAYNGYG 240

Query: 241 YNNEATQQNNYGVSGQN-----------------LHDNPMSGPNNHIPLSRQYEQNSIPL 300
           Y+NEATQQN YG+SGQN                  H NPMSG                  
Sbjct: 241 YSNEATQQNIYGISGQNSWGTWRESKQYLHGTGLKHHNPMSGXXXXXXXXXXXXXXXXXX 300

Query: 301 QHPQGQYHQGSSVEQYQPNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQDGGPLEKLDEF 360
                            PN DTNQN MIG Q+L NVNANEEIG+ +D Q GGPLEKLDEF
Sbjct: 301 XXXXXXXXXXXXXXXXXPNPDTNQNYMIGNQVLYNVNANEEIGKTRDRQQGGPLEKLDEF 360

Query: 361 CKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVKV 420
           CKEG LKEAV+ILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAK VCNYVIKSQTHVKV
Sbjct: 361 CKEGNLKEAVEILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKAVCNYVIKSQTHVKV 420

Query: 421 STYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKA 480
           STYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKA
Sbjct: 421 STYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKA 480

Query: 481 GLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVDE 540
           GLRPDGKMFIGVFSACSVLGD DEGMLHFESMTKNYGITPSMHHYVSIVDMLGS GFVDE
Sbjct: 481 GLRPDGKMFIGVFSACSVLGDVDEGMLHFESMTKNYGITPSMHHYVSIVDMLGSTGFVDE 540

Query: 541 AVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPVK 600
           A+EFIEKMPLEPGVDIWETMMNI+RAHGLMELGDRCFELVEHLD SRLNEQSKAGLLP+K
Sbjct: 541 ALEFIEKMPLEPGVDIWETMMNIARAHGLMELGDRCFELVEHLDPSRLNEQSKAGLLPIK 600

Query: 601 ASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPE 660
           ASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPE
Sbjct: 601 ASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPE 660

Query: 661 TRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISK 720
           TRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISK
Sbjct: 661 TRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISK 720

Query: 721 IVGRELIIRDAKRFHHFKDGLCSCRDYW 732
           IVGRELIIRDAKRFHHFKDGLCSCRDYW
Sbjct: 721 IVGRELIIRDAKRFHHFKDGLCSCRDYW 748

[Close]

BLAST of CsaV3_1G044660 vs. TrEMBL
Match: tr|A0A2I4H753|A0A2I4H753_9ROSI (pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Juglans regia OX=51240 GN=LOC109014107 PE=4 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 1.0e-189
Identity = 408/808 (50.50%), Postives = 498/808 (61.63%), Query Frame = 0


Query: 1   MCKKRAAILARRSLIALYTPRSSCSSSVSNKALNLVRNLSI--ASEREECQNDNGYHADN 60
           M  K A  L    L  L    SS +S  S K L L+RNLSI  A+ER + QN NGYH DN
Sbjct: 1   MSTKGATSLTNNFLAVLSKVCSSSNSLDSFKKLTLLRNLSIGSAAERTDFQNANGYHVDN 60

Query: 61  SLPSYQTHGGSVSSYNQSPGYYQHHAQSTSSQSRPHQDILDGFYTENSLQGLHRPSTSSV 120
           S   YQ + G     +Q+P     H +ST             F   +S+      + +  
Sbjct: 61  S-SEYQQNSGGFYGEDQNP--MDFHQKSTR------------FIGGSSVGASRSSNPNGN 120

Query: 121 YGQKPGGSF-ANTSPMHESASRSYGQHYS------------------------------- 180
            G+     F  N    +ES S  YGQ+Y                                
Sbjct: 121 CGESTTNDFVVNPVAQNESFSGPYGQNYGDLQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 ----------------------GVPPNSCGFNQNHHEAYRETFQNTHHASPVAPNGNFIE 240
                                 G  PNS GF+QN+ E Y+E+  N    +    NGNF  
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXGFEPNSSGFHQNNGEVYKESTINESQNNQYQQNGNFSG 240

Query: 241 N--GYKGGVAQDHN-SYNGSTPRNFVDMNNNVVCGVDRSMSQNNQLGHREIFSAYNGYGY 300
           +     G   Q+HN SY  S+P             V  SMS  N + +R +  +Y  Y  
Sbjct: 241 HYGNNDGKFLQNHNGSYTHSSP-------------VQHSMSGFNGI-NRNLQHSYGSYLE 300

Query: 301 NNEATQQNNYGVSGQNLHDNPMSGPNNHIPLSRQ-----YEQNSIPL-QHPQGQ------ 360
              AT+QN +G + Q L ++  S   N++    Q     Y+ N +     PQGQ      
Sbjct: 301 GARATRQNPHGFNSQGLSESQGSLNENYMQNFGQAQQASYDHNMVNAGMQPQGQSWCQQS 360

Query: 361 -----YHQGSSVEQYQPNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQD-GGPLEKLDEF 420
                Y+Q     Q  PN++ +Q     +Q  ++     E+ E  D     G LE+LD F
Sbjct: 361 PSAGHYNQSLHGGQNPPNSNASQIMTTSSQSSSHPTHGGELAETSDNHPYVGTLEELDSF 420

Query: 421 CKEGKLKEAVQILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVKV 480
           CKEGK+KEAV++L  LEKQ +PVDL RYL LM ACGEARSL+EAK V  ++++ Q+ ++V
Sbjct: 421 CKEGKVKEAVEVLGFLEKQCLPVDLPRYLQLMQACGEARSLQEAKYVHEHIVRIQSPLRV 480

Query: 481 STYNKILEMYSKCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKA 540
           STYN+I+EMY KCGS+DDA+ +FN MP  N+TSWD MITWLAKN  GEDAIDLF +FKK 
Sbjct: 481 STYNRIIEMYWKCGSIDDAWQVFNTMPKHNLTSWDVMITWLAKNDYGEDAIDLFTKFKKT 540

Query: 541 GLRPDGKMFIGVFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVDE 600
           GL+PDG+MFIGVF+ACSVLGD DEGMLHFESM+K+YGI PSM+HYVS+VDMLGS GF+DE
Sbjct: 541 GLKPDGQMFIGVFTACSVLGDIDEGMLHFESMSKDYGIVPSMNHYVSVVDMLGSTGFLDE 600

Query: 601 AVEFIEKMPLEPGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPVK 660
           A EFI KMPLEP VD+WET+MN+ R HG  ELGD C E+V  L+ S LNEQSKAGLLPVK
Sbjct: 601 AFEFIGKMPLEPSVDVWETLMNLCRVHGHRELGDLCAEIVGQLEPSCLNEQSKAGLLPVK 660

Query: 661 ASDLEKEREKKKLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPE 720
            SD+ K++EKKKL+++NLLEVRSRVHEYRAGD SHP  DRIY  LR L+EQMKEAGYIPE
Sbjct: 661 PSDIAKQKEKKKLSSQNLLEVRSRVHEYRAGDRSHPGTDRIYAELRALKEQMKEAGYIPE 720

Query: 721 TRFVLHDIDQEAKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISK 732
           TRFVLHDIDQEAK +ALL HSERLA+A GL+SS ARSPIR+IKNLRVCGDCH+ALKIISK
Sbjct: 721 TRFVLHDIDQEAKEEALLAHSERLAIADGLLSSPARSPIRIIKNLRVCGDCHTALKIISK 779

[Close]

BLAST of CsaV3_1G044660 vs. TrEMBL
Match: tr|A0A251RK37|A0A251RK37_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G571700 PE=4 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 5.0e-184
Identity = 318/437 (72.77%), Postives = 370/437 (84.67%), Query Frame = 0


Query: 296 VEQYQPNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQD-GGPLEKLDEFCKEGKLKEAVQ 355
           V QYQ N D  QN+++ +Q+ +   +  ++ E  +     G LE+LD+FCKEGK+KEAV+
Sbjct: 275 VGQYQTNPDPFQNTIVDSQVASESKSERKLIEASESSPYSGTLEELDKFCKEGKVKEAVE 334

Query: 356 ILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVKVSTYNKILEMYS 415
           IL +LEKQ + VDL  Y  LM ACGEA++LEEAK V   + +  + + VSTYN+ILEMYS
Sbjct: 335 ILGMLEKQQVQVDLHLYFQLMQACGEAKALEEAKFVHENITRLLSPLNVSTYNRILEMYS 394

Query: 416 KCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKAGLRPDGKMFIG 475
           KCGSMD  + +FN+MP+RN+TSWD MI WLAKNGLGEDAIDLF EFKKAGL+PDG+MFIG
Sbjct: 395 KCGSMDSTFMVFNQMPNRNLTSWDIMIAWLAKNGLGEDAIDLFTEFKKAGLKPDGQMFIG 454

Query: 476 VFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVDEAVEFIEKMPLE 535
           VF ACSVLGD  EG+LHFESM+K+YGI PSM HYVS+VDMLGS G+++EA+EFIEKMPLE
Sbjct: 455 VFYACSVLGDTTEGLLHFESMSKDYGIVPSMDHYVSVVDMLGSTGYLEEALEFIEKMPLE 514

Query: 536 PGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPVKASDLEKEREKK 595
           P VD+W+T+MN+ R HG +ELGDRC ELVE LD+S LNEQSKAGL+PVK SDL KE+EKK
Sbjct: 515 PNVDVWKTLMNLCRVHGQLELGDRCAELVEQLDASSLNEQSKAGLVPVKDSDLVKEKEKK 574

Query: 596 KLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQE 655
           KLA +NLLEVRSRVHEYRAGDTSHPEND+IY  LRGLREQMKEAGYIPETRFVLHDIDQE
Sbjct: 575 KLAAQNLLEVRSRVHEYRAGDTSHPENDKIYAQLRGLREQMKEAGYIPETRFVLHDIDQE 634

Query: 656 AKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDA 715
            K DALL HSERLAVAY L+SS ARSP+RVIKNLRVCGDCH+ALKIISKIVGRELI+RDA
Sbjct: 635 GKEDALLAHSERLAVAYALLSSPARSPVRVIKNLRVCGDCHNALKIISKIVGRELIMRDA 694

Query: 716 KRFHHFKDGLCSCRDYW 732
           KRFHHFKDGLCSCRDYW
Sbjct: 695 KRFHHFKDGLCSCRDYW 711

[Close]

BLAST of CsaV3_1G044660 vs. TrEMBL
Match: tr|A0A251RJK0|A0A251RJK0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G571700 PE=4 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 5.0e-184
Identity = 318/437 (72.77%), Postives = 370/437 (84.67%), Query Frame = 0


Query: 296 VEQYQPNTDTNQNSMIGTQLLNNVNANEEIGEPKDCQD-GGPLEKLDEFCKEGKLKEAVQ 355
           V QYQ N D  QN+++ +Q+ +   +  ++ E  +     G LE+LD+FCKEGK+KEAV+
Sbjct: 281 VGQYQTNPDPFQNTIVDSQVASESKSERKLIEASESSPYSGTLEELDKFCKEGKVKEAVE 340

Query: 356 ILEVLEKQHIPVDLSRYLDLMNACGEARSLEEAKVVCNYVIKSQTHVKVSTYNKILEMYS 415
           IL +LEKQ + VDL  Y  LM ACGEA++LEEAK V   + +  + + VSTYN+ILEMYS
Sbjct: 341 ILGMLEKQQVQVDLHLYFQLMQACGEAKALEEAKFVHENITRLLSPLNVSTYNRILEMYS 400

Query: 416 KCGSMDDAYTIFNKMPSRNITSWDTMITWLAKNGLGEDAIDLFYEFKKAGLRPDGKMFIG 475
           KCGSMD  + +FN+MP+RN+TSWD MI WLAKNGLGEDAIDLF EFKKAGL+PDG+MFIG
Sbjct: 401 KCGSMDSTFMVFNQMPNRNLTSWDIMIAWLAKNGLGEDAIDLFTEFKKAGLKPDGQMFIG 460

Query: 476 VFSACSVLGDADEGMLHFESMTKNYGITPSMHHYVSIVDMLGSIGFVDEAVEFIEKMPLE 535
           VF ACSVLGD  EG+LHFESM+K+YGI PSM HYVS+VDMLGS G+++EA+EFIEKMPLE
Sbjct: 461 VFYACSVLGDTTEGLLHFESMSKDYGIVPSMDHYVSVVDMLGSTGYLEEALEFIEKMPLE 520

Query: 536 PGVDIWETMMNISRAHGLMELGDRCFELVEHLDSSRLNEQSKAGLLPVKASDLEKEREKK 595
           P VD+W+T+MN+ R HG +ELGDRC ELVE LD+S LNEQSKAGL+PVK SDL KE+EKK
Sbjct: 521 PNVDVWKTLMNLCRVHGQLELGDRCAELVEQLDASSLNEQSKAGLVPVKDSDLVKEKEKK 580

Query: 596 KLANRNLLEVRSRVHEYRAGDTSHPENDRIYTLLRGLREQMKEAGYIPETRFVLHDIDQE 655
           KLA +NLLEVRSRVHEYRAGDTSHPEND+IY  LRGLREQMKEAGYIPETRFVLHDIDQE
Sbjct: 581 KLAAQNLLEVRSRVHEYRAGDTSHPENDKIYAQLRGLREQMKEAGYIPETRFVLHDIDQE 640

Query: 656 AKNDALLGHSERLAVAYGLISSSARSPIRVIKNLRVCGDCHSALKIISKIVGRELIIRDA 715
            K DALL HSERLAVAY L+SS ARSP+RVIKNLRVCGDCH+ALKIISKIVGRELI+RDA
Sbjct: 641 GKEDALLAHSERLAVAYALLSSPARSPVRVIKNLRVCGDCHNALKIISKIVGRELIMRDA 700

Query: 716 KRFHHFKDGLCSCRDYW 732
           KRFHHFKDGLCSCRDYW
Sbjct: 701 KRFHHFKDGLCSCRDYW 717

The following BLAST results are available for this feature:

BLAST of CsaV3_1G044660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011660234.1	0.0e+00	100.00	PREDICTED: pentatricopeptide repeat-containing protein At4g32450, mitochondrial ...	[more]
XP_008443720.1	0.0e+00	85.83	PREDICTED: pentatricopeptide repeat-containing protein At4g32450, mitochondrial-...	[more]
XP_022139059.1	1.2e-290	71.60	pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Momor...	[more]
XP_022994138.1	1.1e-254	66.49	pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita ...	[more]
XP_023530381.1	9.7e-248	65.29	pentatricopeptide repeat-containing protein At4g32450, mitochondrial [Cucurbita ...	[more]

BLAST of CsaV3_1G044660 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G25580.1	1.2e-127	54.68	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G32450.1	3.4e-122	47.07	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G34370.1	3.1e-99	44.44	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G29710.1	6.1e-95	40.25	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G49170.1	2.1e-79	36.79	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CsaV3_1G044660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q680H3\|PP170_ARATH	2.2e-126	54.68	Pentatricopeptide repeat-containing protein At2g25580 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9SUU7\|PP346_ARATH	6.2e-121	47.07	Pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Arabidop...	[more]
sp\|Q8S8Q7\|PP183_ARATH	5.6e-98	44.44	Pentatricopeptide repeat-containing protein At2g34370, mitochondrial OS=Arabidop...	[more]
sp\|Q9C6G2\|PPR63_ARATH	1.1e-93	40.25	Pentatricopeptide repeat-containing protein At1g29710, mitochondrial OS=Arabidop...	[more]
sp\|Q5G1T1\|PP272_ARATH	3.8e-78	36.79	Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop...	[more]

BLAST of CsaV3_1G044660 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0M061\|A0A0A0M061_CUCSA	0.0e+00	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G659600 PE=4 SV=1	[more]
tr\|A0A1S3B9H3\|A0A1S3B9H3_CUCME	0.0e+00	85.83	pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like OS=Cuc...	[more]
tr\|A0A2I4H753\|A0A2I4H753_9ROSI	1.0e-189	50.50	pentatricopeptide repeat-containing protein At4g32450, mitochondrial OS=Juglans ...	[more]
tr\|A0A251RK37\|A0A251RK37_PRUPE	5.0e-184	72.77	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G571700 PE=4 SV=1	[more]
tr\|A0A251RJK0\|A0A251RJK0_PRUPE	5.0e-184	72.77	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G571700 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR032867	DYW_dom
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G044660.1	CsaV3_1G044660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 584..607
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..143
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 26..654
None	No IPR available	PANTHER	PTHR24015:SF583	SUBFAMILY NOT NAMED	coord: 26..654
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 337..499 e-value: 2.0E-30 score: 108.2
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 602..721 e-value: 5.1E-40 score: 136.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 436..465 e-value: 6.7E-5 score: 22.8 coord: 508..531 e-value: 0.44 score: 10.8 coord: 404..434 e-value: 1.5E-4 score: 21.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 405..434 e-value: 2.6E-5 score: 22.1 coord: 436..468 e-value: 7.6E-6 score: 23.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 468..503 score: 5.897
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 504..534 score: 6.73
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 433..467 score: 10.709
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 402..432 score: 9.569
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 367..401 score: 5.831
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 340..366 score: 5.229

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G044660	CSPI01G32490	Wild cucumber (PI 183967)	cpicucB000
CsaV3_1G044660	Cucsa.356840	Cucumber (Gy14) v1	cgycucB542
CsaV3_1G044660	CsGy1G031370	Cucumber (Gy14) v2	cgybcucB001
CsaV3_1G044660	Cla009581	Watermelon (97103) v1	cucwmB016
CsaV3_1G044660	ClCG03G010910	Watermelon (Charleston Gray)	cucwcgB041
CsaV3_1G044660	Lsi06G007220	Bottle gourd (USVL1VR-Ls)	cuclsiB090
CsaV3_1G044660	MELO3C029427.2	Melon (DHL92) v3.6.1	cucmedB041
CsaV3_1G044660	Cla97C03G061460	Watermelon (97103) v2	cucwmbB033

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G044660	Wax gourd	cucwgoB098
CsaV3_1G044660	Silver-seed gourd	carcucB0949
CsaV3_1G044660	Silver-seed gourd	carcucB1010
CsaV3_1G044660	Cucurbita maxima (Rimu)	cmacucB0066
CsaV3_1G044660	Cucurbita maxima (Rimu)	cmacucB0099
CsaV3_1G044660	Cucurbita moschata (Rifu)	cmocucB0053
CsaV3_1G044660	Cucurbita moschata (Rifu)	cmocucB0090
CsaV3_1G044660	Cucurbita pepo (Zucchini)	cpecucB0428
CsaV3_1G044660	Bottle gourd (USVL1VR-Ls)	cuclsiB068
CsaV3_1G044660	Melon (DHL92) v3.5.1	cucmeB044