CsaV3_1G042080 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G042080
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 26884100 .. 26884324 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGTTTTCTTCTCAATTCCCGATAATTCTTGGAGATTGCTGGCTACCTCCGGCATCGGTTGCTGCTGAATGAACTGTCATTTTTCCATTCTTATTGAAGCTGCTCAAGTTCTTGCTGCCCTGCTCTCGGTTGCAACTGAGTCTGAGCTTTCAACCTCCTTGCTTTCTGATAAAAATGGAGATTGCCACAATCTGAAACCGAAGAATCTGATACTCACTTGA

mRNA sequence

ATGCTTGTTTTCTTCTCAATTCCCGATAATTCTTGGAGATTGCTGGCTACCTCCGGCATCGCTGCTCAAGTTCTTGCTGCCCTGCTCTCGGTTGCAACTGAGTCTGAGCTTTCAACCTCCTTGCTTTCTGATAAAAATGGAGATTGCCACAATCTGAAACCGAAGAATCTGATACTCACTTGA

Coding sequence (CDS)

ATGCTTGTTTTCTTCTCAATTCCCGATAATTCTTGGAGATTGCTGGCTACCTCCGGCATCGCTGCTCAAGTTCTTGCTGCCCTGCTCTCGGTTGCAACTGAGTCTGAGCTTTCAACCTCCTTGCTTTCTGATAAAAATGGAGATTGCCACAATCTGAAACCGAAGAATCTGATACTCACTTGA

Protein sequence

MLVFFSIPDNSWRLLATSGIAAQVLAALLSVATESELSTSLLSDKNGDCHNLKPKNLILT
BLAST of CsaV3_1G042080 vs. NCBI nr
Match: KGN66406.1 (hypothetical protein Csa_1G600960 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-23
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0

Query: 1  MLVFFSIPDNSWRLLATSGIAAQVLAALLSVATESELSTSLLSDKNGDCHNLKPKNLILT 60
          MLVFFSIPDNSWRLLATSGIAAQVLAALLSVATESELSTSLLSDKNGDCHNLKPKNLILT
Sbjct: 1  MLVFFSIPDNSWRLLATSGIAAQVLAALLSVATESELSTSLLSDKNGDCHNLKPKNLILT 60

BLAST of CsaV3_1G042080 vs. TrEMBL
Match: tr|A0A0A0M2I5|A0A0A0M2I5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600960 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-23
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0

Query: 1  MLVFFSIPDNSWRLLATSGIAAQVLAALLSVATESELSTSLLSDKNGDCHNLKPKNLILT 60
          MLVFFSIPDNSWRLLATSGIAAQVLAALLSVATESELSTSLLSDKNGDCHNLKPKNLILT
Sbjct: 1  MLVFFSIPDNSWRLLATSGIAAQVLAALLSVATESELSTSLLSDKNGDCHNLKPKNLILT 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN66406.11.6e-23100.00hypothetical protein Csa_1G600960 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0M2I5|A0A0A0M2I5_CUCSA1.1e-23100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600960 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G042080.1CsaV3_1G042080.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G042080CSPI01G29640Wild cucumber (PI 183967)cpicucB000
The following gene(s) are paralogous to this gene:

None