CsaV3_1G039040 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G039040
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr1 : 24571245 .. 24571817 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGGCAAAAGGTTGGATGATCCAACATGTTGGAGGAGCAATATGAAGGATAAAGAAGAGCTTGCTAGTACTATTTATGGAGGAAGTAACTATTGGCCATATCGAATGAAGTTGACAACCGATCAGTTACGTTGGGATAGCCTCAAGATTTCGGAACCAAAGGAATTCGAGGAACTGCTTTCAAAGAACATGAATGAAGGAAGCTATAGAGATTTGGCTGAGATGATACCCATTGAAGTATCAATCTATGATGTTGATATCTGTGAAACTTTCAAGGTGAAGTTGGTGAAGAAAGAGGCATTTTGGTTTGAACCATTGCCTCTAGTTGGTGAGAAGTCAAAGAAGGATAAGTTGTGTTCTCATGCCACTGCAAAATCGAGTGGCAAGTCCCACAAGGAAAAGAAAGAGTTTGTTTATTCGATCGAGCCTTTTCGCCACATTATAAAGAAGCGGGGCTTAGATTATCAACAAGAGATTGGTTTTCGTTGGTCGGGTAGCAAATCGATGGATCGTTTTGACTTTTCAGTTTTATCTTCTCCAAGGTTGAGCTTAAACAACTTGATGATCTAA

mRNA sequence

ATGCAGGGCAAAAGGTTGGATGATCCAACATGTTGGAGGAGCAATATGAAGGATAAAGAAGAGCTTGCTAGTACTATTTATGGAGGAAGTAACTATTGGCCATATCGAATGAAGTTGACAACCGATCAGTTACGTTGGGATAGCCTCAAGATTTCGGAACCAAAGGAATTCGAGGAACTGCTTTCAAAGAACATGAATGAAGGAAGCTATAGAGATTTGGCTGAGATGATACCCATTGAAGTATCAATCTATGATGTTGATATCTGTGAAACTTTCAAGGTGAAGTTGGTGAAGAAAGAGGCATTTTGGTTTGAACCATTGCCTCTAGTTGGTGAGAAGTCAAAGAAGGATAAGTTGTGTTCTCATGCCACTGCAAAATCGAGTGGCAAGTCCCACAAGGAAAAGAAAGAGTTTGTTTATTCGATCGAGCCTTTTCGCCACATTATAAAGAAGCGGGGCTTAGATTATCAACAAGAGATTGGTTTTCGTTGGTCGGGTAGCAAATCGATGGATCGTTTTGACTTTTCAGTTTTATCTTCTCCAAGGTTGAGCTTAAACAACTTGATGATCTAA

Coding sequence (CDS)

ATGCAGGGCAAAAGGTTGGATGATCCAACATGTTGGAGGAGCAATATGAAGGATAAAGAAGAGCTTGCTAGTACTATTTATGGAGGAAGTAACTATTGGCCATATCGAATGAAGTTGACAACCGATCAGTTACGTTGGGATAGCCTCAAGATTTCGGAACCAAAGGAATTCGAGGAACTGCTTTCAAAGAACATGAATGAAGGAAGCTATAGAGATTTGGCTGAGATGATACCCATTGAAGTATCAATCTATGATGTTGATATCTGTGAAACTTTCAAGGTGAAGTTGGTGAAGAAAGAGGCATTTTGGTTTGAACCATTGCCTCTAGTTGGTGAGAAGTCAAAGAAGGATAAGTTGTGTTCTCATGCCACTGCAAAATCGAGTGGCAAGTCCCACAAGGAAAAGAAAGAGTTTGTTTATTCGATCGAGCCTTTTCGCCACATTATAAAGAAGCGGGGCTTAGATTATCAACAAGAGATTGGTTTTCGTTGGTCGGGTAGCAAATCGATGGATCGTTTTGACTTTTCAGTTTTATCTTCTCCAAGGTTGAGCTTAAACAACTTGATGATCTAA

Protein sequence

MQGKRLDDPTCWRSNMKDKEELASTIYGGSNYWPYRMKLTTDQLRWDSLKISEPKEFEELLSKNMNEGSYRDLAEMIPIEVSIYDVDICETFKVKLVKKEAFWFEPLPLVGEKSKKDKLCSHATAKSSGKSHKEKKEFVYSIEPFRHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSSPRLSLNNLMI

Homology

[Close]

BLAST of CsaV3_1G039040 vs. NCBI nr
Match: KGN66088.1 (hypothetical protein Csa_1G570130 [Cucumis sativus])

HSP 1 Score: 389.8 bits (1000), Expect = 5.3e-105
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MQGKRLDDPTCWRSNMKDKEELASTIYGGSNYWPYRMKLTTDQLRWDSLKISEPKEFEEL 60
           MQGKRLDDPTCWRSNMKDKEELASTIYGGSNYWPYRMKLTTDQLRWDSLKISEPKEFEEL
Sbjct: 1   MQGKRLDDPTCWRSNMKDKEELASTIYGGSNYWPYRMKLTTDQLRWDSLKISEPKEFEEL 60

Query: 61  LSKNMNEGSYRDLAEMIPIEVSIYDVDICETFKVKLVKKEAFWFEPLPLVGEKSKKDKLC 120
           LSKNMNEGSYRDLAEMIPIEVSIYDVDICETFKVKLVKKEAFWFEPLPLVGEKSKKDKLC
Sbjct: 61  LSKNMNEGSYRDLAEMIPIEVSIYDVDICETFKVKLVKKEAFWFEPLPLVGEKSKKDKLC 120

Query: 121 SHATAKSSGKSHKEKKEFVYSIEPFRHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSS 180
           SHATAKSSGKSHKEKKEFVYSIEPFRHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSS
Sbjct: 121 SHATAKSSGKSHKEKKEFVYSIEPFRHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSS 180

Query: 181 PRLSLNNLMI 191
           PRLSLNNLMI
Sbjct: 181 PRLSLNNLMI 190

[Close]

BLAST of CsaV3_1G039040 vs. NCBI nr
Match: XP_022961362.1 (uncharacterized protein LOC111461952 [Cucurbita moschata])

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-70
Identity = 135/188 (71.81%), Postives = 153/188 (81.38%), Query Frame = 0


Query: 2   QGKRLDDPTCWRSNMKDKEELASTIYGGSNYWPYRMKLTTDQLRWDSLKISEPKEFEELL 61
           + + LDDPTC R +MKDKEEL S IYGG NYWPYRMKL+TD+LRWDSLKISE  EFEE++
Sbjct: 68  ESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEGTEFEEMM 127

Query: 62  SKNMNEGSYRDLAEMIPIEVSIYDVDICETFKVKLVKKEAFWFEPLPLVGEKSKKDKLCS 121
            +NMNEGSYRDL EMIPIE+SI+DVDICET+KVKLVKKEAFWFEPLPLVGEKS K     
Sbjct: 128 LRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSSK----- 187

Query: 122 HATAKSSGKSHKEKKEFVYSIEPFRHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSSP 181
                      K +  FVYSIEPFRHI+KKRGLDY QEIG RWSGSK++DRFDFS+LSS 
Sbjct: 188 -----------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSILSSS 239

Query: 182 RLSLNNLM 190
           RLS+ NL+
Sbjct: 248 RLSVYNLI 239

[Close]

BLAST of CsaV3_1G039040 vs. NCBI nr
Match: XP_022968782.1 (uncharacterized protein LOC111467916 [Cucurbita maxima])

HSP 1 Score: 275.0 bits (702), Expect = 1.9e-70
Identity = 136/188 (72.34%), Postives = 152/188 (80.85%), Query Frame = 0


Query: 2   QGKRLDDPTCWRSNMKDKEELASTIYGGSNYWPYRMKLTTDQLRWDSLKISEPKEFEELL 61
           + + LDDPTC R +MKDKEEL S IYGG NYWPYRMKL+TD+LRWDSLKISE  EFEE++
Sbjct: 68  ESRGLDDPTCGRIDMKDKEELISRIYGGGNYWPYRMKLSTDRLRWDSLKISEDTEFEEMM 127

Query: 62  SKNMNEGSYRDLAEMIPIEVSIYDVDICETFKVKLVKKEAFWFEPLPLVGEKSKKDKLCS 121
            +NMNEGSYRDL EMIPIE+SI+DVDICET+KVKLVKKEAFWFEPLPLVGEKSK      
Sbjct: 128 LRNMNEGSYRDLNEMIPIEISIFDVDICETYKVKLVKKEAFWFEPLPLVGEKSK------ 187

Query: 122 HATAKSSGKSHKEKKEFVYSIEPFRHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSSP 181
                      K +  FVYSIEPFRHI+KKRGLDY QEIG RWSGSK++DRFDFSVLSS 
Sbjct: 188 -----------KYQSSFVYSIEPFRHIVKKRGLDYGQEIGLRWSGSKTIDRFDFSVLSSS 238

Query: 182 RLSLNNLM 190
           RLSL  L+
Sbjct: 248 RLSLYTLI 238

[Close]

BLAST of CsaV3_1G039040 vs. NCBI nr
Match: EEF49814.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 180.6 bits (457), Expect = 4.9e-42
Identity = 89/185 (48.11%), Postives = 122/185 (65.95%), Query Frame = 0


Query: 6   LDDPTCWRSNMKDKEELASTIYGGSNYWPYRMKLTTDQLRWDSLKISEPKEFEELLSKNM 65
           L+D     SN    +E+ S+     + WPYR+KLT D +RWDSLKIS  +EFE+++ +N+
Sbjct: 5   LNDQNSEDSNCNKGKEICSSGGDTKSPWPYRVKLTPDSMRWDSLKISPSREFEDIILQNI 64

Query: 66  NEGSYRDLAEMIPIEVSIYDVDICETFKVKLVKKEAFWFEPLPLVGEKSKKDKLCSHATA 125
           +  S++ L    PIE+SIYDVD  ET+KV L KKE+FWFEPLP +G+K +K       TA
Sbjct: 65  SAASHKALETWQPIEISIYDVDTHETYKVHLAKKESFWFEPLPDIGQKQQKSATSGIITA 124

Query: 126 KSSGKSHKE--KKEFVYSIEPFRHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSSPRL 185
             S    KE   + F YS++PFRHI+KKRGL Y QEIG  WSG++ ++  DFSVL +PR 
Sbjct: 125 PKSSYESKEMIAENFAYSLQPFRHIVKKRGLSYDQEIGLNWSGNRIVNNIDFSVLQAPRF 184

Query: 186 SLNNL 189
            L ++
Sbjct: 185 GLQDI 189

[Close]

BLAST of CsaV3_1G039040 vs. NCBI nr
Match: KYP71243.1 (hypothetical protein KK1_010492 [Cajanus cajan])

HSP 1 Score: 161.8 bits (408), Expect = 2.3e-36
Identity = 82/156 (52.56%), Postives = 109/156 (69.87%), Query Frame = 0


Query: 37  MKLTTDQLRWDSLKISEPKEFEELLSKNMNEGSYRDLAEMIPIEVSIYDVDICETFKVKL 96
           MKLTTD++RWDSLKIS  KEFEE + ++MNE S +DL   IP+ + I+DVD CET++ KL
Sbjct: 1   MKLTTDRMRWDSLKISPSKEFEECILEHMNESSRKDLESWIPVNIMIHDVDTCETYETKL 60

Query: 97  VKKEAFWFEPLPLVGEKSKKDKL-CSHATAKSSGKSH---KEKKEFVYSIEPFRHIIKKR 156
            KKE+FWF+P+P +GEK K+ +L CS   +      +   K ++EF YSIEPFRHII+KR
Sbjct: 61  SKKESFWFDPMPALGEKPKEGELSCSLKKSMREPPCYNLEKAREEFAYSIEPFRHIIRKR 120

Query: 157 GLDYQQEIGFRWSGSKSMDRFDFSVLSSPRLSLNNL 189
            L Y QEIG R+ G K +  F+FSVL S  L +  +
Sbjct: 121 DLKYDQEIGLRYCGGKVVVAFEFSVLHSSLLGIRRI 156

[Close]

BLAST of CsaV3_1G039040 vs. TrEMBL
Match: tr|A0A0A0LWG5|A0A0A0LWG5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G570130 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 3.5e-105
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MQGKRLDDPTCWRSNMKDKEELASTIYGGSNYWPYRMKLTTDQLRWDSLKISEPKEFEEL 60
           MQGKRLDDPTCWRSNMKDKEELASTIYGGSNYWPYRMKLTTDQLRWDSLKISEPKEFEEL
Sbjct: 1   MQGKRLDDPTCWRSNMKDKEELASTIYGGSNYWPYRMKLTTDQLRWDSLKISEPKEFEEL 60

Query: 61  LSKNMNEGSYRDLAEMIPIEVSIYDVDICETFKVKLVKKEAFWFEPLPLVGEKSKKDKLC 120
           LSKNMNEGSYRDLAEMIPIEVSIYDVDICETFKVKLVKKEAFWFEPLPLVGEKSKKDKLC
Sbjct: 61  LSKNMNEGSYRDLAEMIPIEVSIYDVDICETFKVKLVKKEAFWFEPLPLVGEKSKKDKLC 120

Query: 121 SHATAKSSGKSHKEKKEFVYSIEPFRHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSS 180
           SHATAKSSGKSHKEKKEFVYSIEPFRHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSS
Sbjct: 121 SHATAKSSGKSHKEKKEFVYSIEPFRHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSS 180

Query: 181 PRLSLNNLMI 191
           PRLSLNNLMI
Sbjct: 181 PRLSLNNLMI 190

[Close]

BLAST of CsaV3_1G039040 vs. TrEMBL
Match: tr|A0A2N9ISH1|A0A2N9ISH1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55684 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.2e-42
Identity = 92/165 (55.76%), Postives = 118/165 (71.52%), Query Frame = 0


Query: 30  SNYWPYRMKLTTDQLRWDSLKISEPKEFEELLSKNMNEGSYRDLAEMIPIEVSIYDVDIC 89
           SN WP+R+KLTTD +RWDSLKIS  +EFEE +  N+NE S+R L   +P+E+SIYDVD  
Sbjct: 26  SNSWPFRIKLTTDHIRWDSLKISPSEEFEEHILHNLNEASHRALEAWLPVEISIYDVDTH 85

Query: 90  ETFKVKLVKKEAFWFEPLPLVGEKSKKDK-LCSHATAKSSGKSH---KEKKEFVYSIEPF 149
           ET+ VKL KKE+FWF+P PL  EK +K+K   S AT       +   + +K F YSIEPF
Sbjct: 86  ETYPVKLAKKESFWFKPTPLFYEKPRKEKSFFSDATMMEQPACYDLEEARKVFAYSIEPF 145

Query: 150 RHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSSPRLSLNNLMI 191
           R I+KKR L+Y QEIG RWSGSK +++ +FSVL  PRL L++L I
Sbjct: 146 RQIVKKRNLNYNQEIGLRWSGSKGVEKLEFSVLYVPRLDLSSLRI 190

[Close]

BLAST of CsaV3_1G039040 vs. TrEMBL
Match: tr|B9RF43|B9RF43_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1431320 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.2e-42
Identity = 89/185 (48.11%), Postives = 122/185 (65.95%), Query Frame = 0


Query: 6   LDDPTCWRSNMKDKEELASTIYGGSNYWPYRMKLTTDQLRWDSLKISEPKEFEELLSKNM 65
           L+D     SN    +E+ S+     + WPYR+KLT D +RWDSLKIS  +EFE+++ +N+
Sbjct: 5   LNDQNSEDSNCNKGKEICSSGGDTKSPWPYRVKLTPDSMRWDSLKISPSREFEDIILQNI 64

Query: 66  NEGSYRDLAEMIPIEVSIYDVDICETFKVKLVKKEAFWFEPLPLVGEKSKKDKLCSHATA 125
           +  S++ L    PIE+SIYDVD  ET+KV L KKE+FWFEPLP +G+K +K       TA
Sbjct: 65  SAASHKALETWQPIEISIYDVDTHETYKVHLAKKESFWFEPLPDIGQKQQKSATSGIITA 124

Query: 126 KSSGKSHKE--KKEFVYSIEPFRHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSSPRL 185
             S    KE   + F YS++PFRHI+KKRGL Y QEIG  WSG++ ++  DFSVL +PR 
Sbjct: 125 PKSSYESKEMIAENFAYSLQPFRHIVKKRGLSYDQEIGLNWSGNRIVNNIDFSVLQAPRF 184

Query: 186 SLNNL 189
            L ++
Sbjct: 185 GLQDI 189

[Close]

BLAST of CsaV3_1G039040 vs. TrEMBL
Match: tr|A0A2N9HHG1|A0A2N9HHG1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30409 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.2e-42
Identity = 91/165 (55.15%), Postives = 118/165 (71.52%), Query Frame = 0


Query: 30  SNYWPYRMKLTTDQLRWDSLKISEPKEFEELLSKNMNEGSYRDLAEMIPIEVSIYDVDIC 89
           SN WP+R++LTTD +RWDSLKIS  +EFEE +  N+NE S+R L   +P+E+SIYDVD  
Sbjct: 26  SNSWPFRIRLTTDHIRWDSLKISPSEEFEEHILHNLNEASHRALEAWLPVEISIYDVDTH 85

Query: 90  ETFKVKLVKKEAFWFEPLPLVGEKSKKDK-LCSHATAKSSGKSH---KEKKEFVYSIEPF 149
           ET+ VKL KKE+FWF+P PL  EK +K+K   S AT       +   + +K F YSIEPF
Sbjct: 86  ETYPVKLAKKESFWFKPTPLFYEKPRKEKSFFSDATMMEQPACYDLEEARKVFAYSIEPF 145

Query: 150 RHIIKKRGLDYQQEIGFRWSGSKSMDRFDFSVLSSPRLSLNNLMI 191
           R I+KKR L+Y QEIG RWSGSK +++ +FSVL  PRL L++L I
Sbjct: 146 RQIVKKRNLNYNQEIGLRWSGSKGVEKLEFSVLYVPRLDLSSLRI 190

[Close]

BLAST of CsaV3_1G039040 vs. TrEMBL
Match: tr|A0A151TW01|A0A151TW01_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_010492 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.6e-36
Identity = 82/156 (52.56%), Postives = 109/156 (69.87%), Query Frame = 0


Query: 37  MKLTTDQLRWDSLKISEPKEFEELLSKNMNEGSYRDLAEMIPIEVSIYDVDICETFKVKL 96
           MKLTTD++RWDSLKIS  KEFEE + ++MNE S +DL   IP+ + I+DVD CET++ KL
Sbjct: 1   MKLTTDRMRWDSLKISPSKEFEECILEHMNESSRKDLESWIPVNIMIHDVDTCETYETKL 60

Query: 97  VKKEAFWFEPLPLVGEKSKKDKL-CSHATAKSSGKSH---KEKKEFVYSIEPFRHIIKKR 156
            KKE+FWF+P+P +GEK K+ +L CS   +      +   K ++EF YSIEPFRHII+KR
Sbjct: 61  SKKESFWFDPMPALGEKPKEGELSCSLKKSMREPPCYNLEKAREEFAYSIEPFRHIIRKR 120

Query: 157 GLDYQQEIGFRWSGSKSMDRFDFSVLSSPRLSLNNL 189
            L Y QEIG R+ G K +  F+FSVL S  L +  +
Sbjct: 121 DLKYDQEIGLRYCGGKVVVAFEFSVLHSSLLGIRRI 156

The following BLAST results are available for this feature:

BLAST of CsaV3_1G039040 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN66088.1	5.3e-105	100.00	hypothetical protein Csa_1G570130 [Cucumis sativus]	[more]
XP_022961362.1	1.5e-70	71.81	uncharacterized protein LOC111461952 [Cucurbita moschata]	[more]
XP_022968782.1	1.9e-70	72.34	uncharacterized protein LOC111467916 [Cucurbita maxima]	[more]
EEF49814.1	4.9e-42	48.11	conserved hypothetical protein [Ricinus communis]	[more]
KYP71243.1	2.3e-36	52.56	hypothetical protein KK1_010492 [Cajanus cajan]	[more]

BLAST of CsaV3_1G039040 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G039040 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsaV3_1G039040 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LWG5\|A0A0A0LWG5_CUCSA	3.5e-105	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G570130 PE=4 SV=1	[more]
tr\|A0A2N9ISH1\|A0A2N9ISH1_FAGSY	3.2e-42	55.76	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55684 PE=4 SV=1	[more]
tr\|B9RF43\|B9RF43_RICCO	3.2e-42	48.11	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1431320 PE=4 SV=1	[more]
tr\|A0A2N9HHG1\|A0A2N9HHG1_FAGSY	7.2e-42	55.15	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS30409 PE=4 SV=1	[more]
tr\|A0A151TW01\|A0A151TW01_CAJCA	1.6e-36	52.56	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_010492 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G039040.1	CsaV3_1G039040.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G039040	CSPI01G26700	Wild cucumber (PI 183967)	cpicucB000
CsaV3_1G039040	CmoCh10G011570	Cucurbita moschata (Rifu)	cmocucB0062
CsaV3_1G039040	Cla005243	Watermelon (97103) v1	cucwmB025
CsaV3_1G039040	MELO3C015330	Melon (DHL92) v3.5.1	cucmeB042
CsaV3_1G039040	ClCG03G016890	Watermelon (Charleston Gray)	cucwcgB050
CsaV3_1G039040	MELO3C015330.2	Melon (DHL92) v3.6.1	cucmedB039
CsaV3_1G039040	Cla97C03G067240	Watermelon (97103) v2	cucwmbB041

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G039040	Silver-seed gourd	carcucB0837
CsaV3_1G039040	Cucumber (Gy14) v2	cgybcucB001
CsaV3_1G039040	Cucumber (Gy14) v1	cgycucB293
CsaV3_1G039040	Cucurbita maxima (Rimu)	cmacucB0069
CsaV3_1G039040	Cucurbita maxima (Rimu)	cmacucB0114
CsaV3_1G039040	Cucurbita maxima (Rimu)	cmacucB0184
CsaV3_1G039040	Cucurbita maxima (Rimu)	cmacucB0922
CsaV3_1G039040	Cucurbita moschata (Rifu)	cmocucB0102
CsaV3_1G039040	Cucurbita moschata (Rifu)	cmocucB0169
CsaV3_1G039040	Cucurbita moschata (Rifu)	cmocucB0914
CsaV3_1G039040	Cucurbita pepo (Zucchini)	cpecucB0432
CsaV3_1G039040	Cucurbita pepo (Zucchini)	cpecucB0817
CsaV3_1G039040	Cucurbita pepo (Zucchini)	cpecucB0998
CsaV3_1G039040	Bottle gourd (USVL1VR-Ls)	cuclsiB068
CsaV3_1G039040	Wax gourd	cucwgoB090
CsaV3_1G039040	Wax gourd	cucwgoB111