CsaV3_1G036850 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G036850
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionTranscription termination factor like
Locationchr1 : 22693192 .. 22694106 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCTTCATCTGCAACTGCTTTCCATTCTTCTTTCTGTTTCTCTTCTCATAATAAACTTTCTTCTTCTCCCTCAAATTCCCATCAACCAAACACTTCCTTATCACCCAAACCCAAAACCCTTCTCCATAAACATCCTCTCTACACGCCACTTCATTCCACAGTCTCTTCTCAAACCAAAGAGAAAATTCTCTGTCTTGAAATCATGGGTGTTGATTCTGGCAAAGCTCTTTCTCAAAACCCTTCTCTTCATTCTGTTACTCTTGAATCCATTCACTCTGTCATCTCCTTCCTCCAATCTAAAGGCATTCACCAAAAGGACTTCGCCAAAATCTTTGGAATGTGTCCTAAAATCCTCACTTCAGATGTTAAAACTGATTTAGTACCAGTTTTCAACTTTCTCTCTGAAGATCTCAAAATCCCAGATCAGAACTTTAGAAAAGCTATCAATAAGTGCCCAAGATTGCTTGCTTCAAGTGCTGAAGATCAGTTGAAACCTGCTTTGTTTTATCTTCAAAGACTTGGGTTGAAGGATTTGGAGGCTTTGGCTTATCATGATTCTGTTTTGCTGGTTTCAAGTGTGGAGAAGACCTTGATTCCTAAACTCAAGTATTTGGAGAGTTTGGGATTCACAAGGAGTGAAATCGTTGGGATGGTATTAAGGTGTCCAGCTCTGCTTACTTTCAGTATTGAAAACAATTTCAAGCCAAAGTTTGAGTATTTCTCTGTGGAGATGCATAAAAAACTTGAGGAGCTTAAGGATTTTCCTCAGTATTTTGCCTTTAGCTTGGAGAAGAGGATAAAGCCGAGGTATGTGGAGACAGTGGAGAGTGGAAAAAAAGTGCCTTTGTCACTTATGCTTAAGACCACAGATGTTGAGTTTAGAGAGTTGTTAGCAGAAGGGGGTGGTTGA

mRNA sequence

ATGTCTTCTTCATCTGCAACTGCTTTCCATTCTTCTTTCTGTTTCTCTTCTCATAATAAACTTTCTTCTTCTCCCTCAAATTCCCATCAACCAAACACTTCCTTATCACCCAAACCCAAAACCCTTCTCCATAAACATCCTCTCTACACGCCACTTCATTCCACAGTCTCTTCTCAAACCAAAGAGAAAATTCTCTGTCTTGAAATCATGGGTGTTGATTCTGGCAAAGCTCTTTCTCAAAACCCTTCTCTTCATTCTGTTACTCTTGAATCCATTCACTCTGTCATCTCCTTCCTCCAATCTAAAGGCATTCACCAAAAGGACTTCGCCAAAATCTTTGGAATGTGTCCTAAAATCCTCACTTCAGATGTTAAAACTGATTTAGTACCAGTTTTCAACTTTCTCTCTGAAGATCTCAAAATCCCAGATCAGAACTTTAGAAAAGCTATCAATAAGTGCCCAAGATTGCTTGCTTCAAGTGCTGAAGATCAGTTGAAACCTGCTTTGTTTTATCTTCAAAGACTTGGGTTGAAGGATTTGGAGGCTTTGGCTTATCATGATTCTGTTTTGCTGGTTTCAAGTGTGGAGAAGACCTTGATTCCTAAACTCAAGTATTTGGAGAGTTTGGGATTCACAAGGAGTGAAATCGTTGGGATGGTATTAAGGTGTCCAGCTCTGCTTACTTTCAGTATTGAAAACAATTTCAAGCCAAAGTTTGAGTATTTCTCTGTGGAGATGCATAAAAAACTTGAGGAGCTTAAGGATTTTCCTCAGTATTTTGCCTTTAGCTTGGAGAAGAGGATAAAGCCGAGGTATGTGGAGACAGTGGAGAGTGGAAAAAAAGTGCCTTTGTCACTTATGCTTAAGACCACAGATGTTGAGTTTAGAGAGTTGTTAGCAGAAGGGGGTGGTTGA

Coding sequence (CDS)

ATGTCTTCTTCATCTGCAACTGCTTTCCATTCTTCTTTCTGTTTCTCTTCTCATAATAAACTTTCTTCTTCTCCCTCAAATTCCCATCAACCAAACACTTCCTTATCACCCAAACCCAAAACCCTTCTCCATAAACATCCTCTCTACACGCCACTTCATTCCACAGTCTCTTCTCAAACCAAAGAGAAAATTCTCTGTCTTGAAATCATGGGTGTTGATTCTGGCAAAGCTCTTTCTCAAAACCCTTCTCTTCATTCTGTTACTCTTGAATCCATTCACTCTGTCATCTCCTTCCTCCAATCTAAAGGCATTCACCAAAAGGACTTCGCCAAAATCTTTGGAATGTGTCCTAAAATCCTCACTTCAGATGTTAAAACTGATTTAGTACCAGTTTTCAACTTTCTCTCTGAAGATCTCAAAATCCCAGATCAGAACTTTAGAAAAGCTATCAATAAGTGCCCAAGATTGCTTGCTTCAAGTGCTGAAGATCAGTTGAAACCTGCTTTGTTTTATCTTCAAAGACTTGGGTTGAAGGATTTGGAGGCTTTGGCTTATCATGATTCTGTTTTGCTGGTTTCAAGTGTGGAGAAGACCTTGATTCCTAAACTCAAGTATTTGGAGAGTTTGGGATTCACAAGGAGTGAAATCGTTGGGATGGTATTAAGGTGTCCAGCTCTGCTTACTTTCAGTATTGAAAACAATTTCAAGCCAAAGTTTGAGTATTTCTCTGTGGAGATGCATAAAAAACTTGAGGAGCTTAAGGATTTTCCTCAGTATTTTGCCTTTAGCTTGGAGAAGAGGATAAAGCCGAGGTATGTGGAGACAGTGGAGAGTGGAAAAAAAGTGCCTTTGTCACTTATGCTTAAGACCACAGATGTTGAGTTTAGAGAGTTGTTAGCAGAAGGGGGTGGTTGA

Protein sequence

MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTVSSQTKEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVKTDLVPVFNFLSEDLKIPDQNFRKAINKCPRLLASSAEDQLKPALFYLQRLGLKDLEALAYHDSVLLVSSVEKTLIPKLKYLESLGFTRSEIVGMVLRCPALLTFSIENNFKPKFEYFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELLAEGGG
Homology
[Close]
BLAST of CsaV3_1G036850 vs. NCBI nr
Match: XP_004154376.1 (PREDICTED: transcription termination factor 3, mitochondrial [Cucumis sativus] >KGN65875.1 hypothetical protein Csa_1G535790 [Cucumis sativus])

HSP 1 Score: 465.7 bits (1197), Expect = 1.2e-127
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0 

Query: 1   MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTVSSQT 60
           MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTVSSQT
Sbjct: 1   MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTVSSQT 60

Query: 61  KEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120
           KEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL
Sbjct: 61  KEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120

Query: 121 TSDVKTDLVPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDL 180
           TSDVKTDLVPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDL
Sbjct: 121 TSDVKTDLVPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDL 180

Query: 181 EALAYHDSVXXXXXXXXXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIENNFKPKFE 240
           EALAYHDSVXXXXXXXXXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIENNFKPKFE
Sbjct: 181 EALAYHDSVXXXXXXXXXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIENNFKPKFE 240

Query: 241 YFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELLA 300
           YFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELLA
Sbjct: 241 YFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELLA 300

Query: 301 EGGG 305
           EGGG
Sbjct: 301 EGGG 304

[Close]
BLAST of CsaV3_1G036850 vs. NCBI nr
Match: XP_008444692.1 (PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo])

HSP 1 Score: 457.2 bits (1175), Expect = 4.3e-125
Identity = 297/304 (97.70%), Postives = 301/304 (99.01%), Query Frame = 0 

Query: 1   MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTVSSQT 60
           MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHST+SSQT
Sbjct: 1   MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTLSSQT 60

Query: 61  KEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120
           KEKILCLEIMGVDSGKALSQNPSLH VTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL
Sbjct: 61  KEKILCLEIMGVDSGKALSQNPSLHCVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120

Query: 121 TSDVKTDLVPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDL 180
           TSDVKTDL+PVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QRLGLKDL
Sbjct: 121 TSDVKTDLIPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRLGLKDL 180

Query: 181 EALAYHDSVXXXXXXXXXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIENNFKPKFE 240
           EALAYHDSVXXXXXXXXXXXXXXXXXXXXXXXRSE VGMVLRCPALLTFSIENNFKPKFE
Sbjct: 181 EALAYHDSVXXXXXXXXXXXXXXXXXXXXXXXRSETVGMVLRCPALLTFSIENNFKPKFE 240

Query: 241 YFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELLA 300
           YFSVEMH+KLEELKDFPQYFAFSLEKRIKPR+VETVESGKKVPLSLMLKTTDVEFRELLA
Sbjct: 241 YFSVEMHRKLEELKDFPQYFAFSLEKRIKPRHVETVESGKKVPLSLMLKTTDVEFRELLA 300

Query: 301 EGGG 305
           EGGG
Sbjct: 301 EGGG 304

[Close]
BLAST of CsaV3_1G036850 vs. NCBI nr
Match: XP_022139889.1 (transcription termination factor MTEF1, chloroplastic [Momordica charantia])

HSP 1 Score: 414.1 bits (1063), Expect = 4.2e-112
Identity = 257/308 (83.44%), Postives = 267/308 (86.69%), Query Frame = 0 

Query: 1   MSSSSATAFHSSFCFSSHNKLSSSPSN----SHQPNTSLSPKPKTLLHKHPLYTPLHSTV 60
           M +++ATAFHSSFCFSSH KLSSSPSN    SHQPNT L+ KPKTL HKHPLYTPLHST+
Sbjct: 1   MPAATATAFHSSFCFSSH-KLSSSPSNSHXXSHQPNTLLAAKPKTLFHKHPLYTPLHSTL 60

Query: 61  SSQTKEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMC 120
           SSQ KEKILCLEIMGVD+GKALS NPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMC
Sbjct: 61  SSQVKEKILCLEIMGVDAGKALSLNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMC 120

Query: 121 PKILTSDVKTDLVPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLG 180
           PKILTSDVKTDL+PVFNFLSEDLKI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLG
Sbjct: 121 PKILTSDVKTDLIPVFNFLSEDLKIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLG 180

Query: 181 LKDLEALAYHDSVXXXXXXXXXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIENNFK 240
           L+DLEALAYHDSV                       RSE VGMVLRCPALLTFSIENNFK
Sbjct: 181 LRDLEALAYHDSVLLVSSVERTLIPKLKYLESLGFSRSETVGMVLRCPALLTFSIENNFK 240

Query: 241 PKFEYFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFR 300
           PKFEYFS EMH KLEELKDFPQYFAFSLEKRIKPRY+ETV+SGKKVPLSLMLKTTD EFR
Sbjct: 241 PKFEYFSGEMHGKLEELKDFPQYFAFSLEKRIKPRYLETVQSGKKVPLSLMLKTTDDEFR 300

Query: 301 ELLAEGGG 305
           ELL EG G
Sbjct: 301 ELLREGQG 307

[Close]
BLAST of CsaV3_1G036850 vs. NCBI nr
Match: XP_022927002.1 (transcription termination factor MTEF1, chloroplastic-like [Cucurbita moschata] >XP_023519150.1 transcription termination factor MTEF1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375.6 bits (963), Expect = 1.7e-100
Identity = 259/299 (86.62%), Postives = 271/299 (90.64%), Query Frame = 0 

Query: 6   ATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTVSSQTKEKIL 65
           A AF SSFCFSSH +LS+SPSNS QPNT L+ KPK+L HKHPLYTPLHST+SSQ KEKIL
Sbjct: 3   AAAFPSSFCFSSH-ELSASPSNSQQPNTFLAAKPKSLFHKHPLYTPLHSTLSSQIKEKIL 62

Query: 66  CLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVK 125
           CLEIMGVD+GKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVK
Sbjct: 63  CLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVK 122

Query: 126 TDLVPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDLEALAY 185
            DL+PVF+FLSEDLK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLG KDLEALAY
Sbjct: 123 ADLIPVFSFLSEDLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGFKDLEALAY 182

Query: 186 HDSVXXXXXXXXXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIENNFKPKFEYFSVE 245
            DS XXXXXXXXXXXXXXXXXXXXXXX    VGMVLRCPALLTFSIENN KPKFEYFS E
Sbjct: 183 QDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGMVLRCPALLTFSIENNLKPKFEYFSGE 242

Query: 246 MHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELLAEGGG 305
           M +K+EELKDFPQYF FSLEKRIKPRYVETV+SGK V L LMLK TD EF+ELL E GG
Sbjct: 243 MQRKVEELKDFPQYFGFSLEKRIKPRYVETVQSGKNVALPLMLKATDDEFKELLREEGG 300

[Close]
BLAST of CsaV3_1G036850 vs. NCBI nr
Match: XP_023001451.1 (transcription termination factor MTEF1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 373.6 bits (958), Expect = 6.3e-100
Identity = 259/299 (86.62%), Postives = 269/299 (89.97%), Query Frame = 0 

Query: 6   ATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTVSSQTKEKIL 65
           A AF SSFCFSSH KLS SP NS QPNT L+ KPK+L HKHPLYTPLHST+SSQ KEKIL
Sbjct: 3   AAAFPSSFCFSSH-KLSVSPLNSQQPNTFLAAKPKSLFHKHPLYTPLHSTLSSQIKEKIL 62

Query: 66  CLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVK 125
           CLEIMGVD+GKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVK
Sbjct: 63  CLEIMGVDAGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVK 122

Query: 126 TDLVPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDLEALAY 185
            DL+PVF+FLSEDLK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLG KDLEALAY
Sbjct: 123 ADLIPVFSFLSEDLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGFKDLEALAY 182

Query: 186 HDSVXXXXXXXXXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIENNFKPKFEYFSVE 245
            DS XXXXXXXXXXXXXXXXXXXXXXX    VGMVLRCPALLTFSIENN KPKFEYFS E
Sbjct: 183 QDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGMVLRCPALLTFSIENNLKPKFEYFSGE 242

Query: 246 MHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELLAEGGG 305
           M +K+EELKDFPQYF FSLEKRIKPRYVETV+SGK V L LMLK TD EF+ELL E GG
Sbjct: 243 MQRKVEELKDFPQYFGFSLEKRIKPRYVETVQSGKNVALPLMLKATDDEFKELLREEGG 300

[Close]
BLAST of CsaV3_1G036850 vs. TAIR10
Match: AT2G34620.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 256.9 bits (655), Expect = 1.6e-68
Identity = 200/283 (70.67%), Postives = 224/283 (79.15%), Query Frame = 0 

Query: 20  KLSSSPSNSHQPNTSLSPKP---KTLLHKHPLYTPLHSTVSSQTKEKILCLEIMGVDSGK 79
           K  S P  S   +T LS KP   KT LH HPL+T    TV+ Q KEKILCLE+MG+DSGK
Sbjct: 14  KKPSCPQQSQ--STFLSTKPTTIKTNLHSHPLFTVADQTVTLQMKEKILCLELMGIDSGK 73

Query: 80  ALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVKTDLVPVFNFLS 139
           ALS NP L S  L+SI SV+ FLQSKGI+  D  +I GMCPKILTSDV+T+L PVF FLS
Sbjct: 74  ALSLNPCLCSAPLDSIQSVLHFLQSKGIYPNDLPRILGMCPKILTSDVRTELYPVFMFLS 133

Query: 140 EDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDLEALAYHDSVXXXXXXX 199
            DL +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDLEALAY    XXXXXXX
Sbjct: 134 NDLHVPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDLEALAYQXXXXXXXXXX 193

Query: 200 XXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIENNFKPKFEYFSVEMHKKLEELKDF 259
           XXXXXXXXXXXXXXXX     GM+LRCPAL TFSIENNFKPK +YF  E+  KLE LK+F
Sbjct: 194 XXXXXXXXXXXXXXXXXXXXXGMILRCPALFTFSIENNFKPKLDYFMSEIKGKLENLKEF 253

Query: 260 PQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELL 300
           PQYFAFSLEKRIKPR++E++E G ++PLSLMLK+TD EF +LL
Sbjct: 254 PQYFAFSLEKRIKPRHLESMERGLELPLSLMLKSTDEEFEQLL 294

[Close]
BLAST of CsaV3_1G036850 vs. TAIR10
Match: AT2G36000.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 103.2 bits (256), Expect = 2.9e-22
Identity = 102/306 (33.33%), Postives = 153/306 (50.00%), Query Frame = 0 

Query: 3   SSSATAFHSSFCFSSHNKLSSSPSNSHQPNTS------LSPKPKTLLHKHPLYTPLHSTV 62
           SSS  + H +F   S  + ++ P+ S +PNTS                            
Sbjct: 10  SSSLPSLHHNFPSLSRLRFNNFPALSFKPNTSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 69

Query: 63  SSQTKEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIH--QKDFAKIFG 122
            S   EK++ L+ +G+D    ++++P L S  L ++ SV+ ++ +  I+   +DF ++  
Sbjct: 70  XSSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVVDYMTTPPINFTLQDFRRLVS 129

Query: 123 MCPKILTSDVKTDLVPVFNFLSEDLKI-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 182
           MCP++LTS + +  +PV  FL  ++ +                                Q
Sbjct: 130 MCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQ 189

Query: 183 RLGLKDLEALAYHDSVXXXXXXXXXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIEN 242
           R+G+ D     +    XXXXXXXXXXXXXXXXXXXXXX R     M  R P L  +SI  
Sbjct: 190 RIGILD----PHKHXXXXXXXXXXXXXXXXXXXXXXXXSRRSATAMFKRFPQLFNYSIAE 249

Query: 243 NFKPKFEYFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDV 300
           N++PK +Y  VEM + + E+ +FPQYF+FSLE RIKPR+      G + PL +MLKT + 
Sbjct: 250 NYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEA 309

[Close]
BLAST of CsaV3_1G036850 vs. TAIR10
Match: AT3G18870.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 96.7 bits (239), Expect = 2.7e-20
Identity = 78/270 (28.89%), Postives = 121/270 (44.81%), Query Frame = 0 

Query: 30  QPNTSLSPKPKTLLHKHPLYTPLHSTVSSQTKEKILCLEIMGVDSGKALSQNPSL--HSV 89
           QP +S S  P     K     PL+    +  +E +  L  +G+     + QNP L   + 
Sbjct: 11  QPLSSFSSPPSPSSSK-----PLYLKFQTSHRENLRHLSSLGI-----VPQNPRLAPPAN 70

Query: 90  TLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL--TSDVKTDLVPVFNFLSEDLKIXXXX 149
            L  I S ++ L+SKGI  +DF ++  +CP++   T D+ + L PVF+FL+ +L      
Sbjct: 71  DLSVILSAVNLLKSKGISDEDFPRLVFLCPQLFSPTFDI-SKLDPVFDFLTGELGASAEE 130

Query: 150 XXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDLEALAYHDSVXXXXXXXXXXXXXXXX 209
                                      + LG+++L   A   +                 
Sbjct: 131 SRGLIVNCPNILFSDVEYCLRPTLVYLKELGVRNLNR-ASKTNAHVLNTRVEKLRAKMRF 190

Query: 210 XXXXXXXRSEIVGMVLRCPALLTFSIENNFKPKFEYFSVEMHKKLEELKDFPQYFAFSLE 269
                    E   +  R PA+  +S+E+N +PKFE+   +M ++LEELK FPQYFAFSL 
Sbjct: 191 LKSIGFEHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFAFSLG 250

Query: 270 KRIKPRYVETVESGKKVPLSLMLKTTDVEF 296
           KRI+PR+    +   +V LS ML   D +F
Sbjct: 251 KRIRPRHWHLKKKNVRVSLSRMLMWGDQKF 268

[Close]
BLAST of CsaV3_1G036850 vs. TAIR10
Match: AT2G03050.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 95.5 bits (236), Expect = 6.0e-20
Identity = 68/242 (28.10%), Postives = 103/242 (42.56%), Query Frame = 0 

Query: 61  KEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120
           +EK++ L+ + VD  KAL  NPSL S  + S+ SV + L S G+ +    +I  M P +L
Sbjct: 33  REKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLL 92

Query: 121 TSDVKTDLVPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDL 180
           TSD +++++PV  FLS ++ I                               + LG    
Sbjct: 93  TSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGR 152

Query: 181 EALAYHDSV-XXXXXXXXXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIENNFKPKF 240
           + +   ++V                        R E+  MV+                  
Sbjct: 153 DTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVXXXXXXXXXXXXXXXXXX 212

Query: 241 EYFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELL 300
                 M   ++ELK FPQYF+FSLE++IKPR+    E G  +PLS MLK +D +F   L
Sbjct: 213 XXXXXXMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHWL 272

Query: 301 AE 302
            E
Sbjct: 273 LE 274

[Close]
BLAST of CsaV3_1G036850 vs. TAIR10
Match: AT4G14605.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 65.1 bits (157), Expect = 8.7e-11
Identity = 35/85 (41.18%), Postives = 54/85 (63.53%), Query Frame = 0 

Query: 215 EIVGMVLRCPALLTFSIENNFKPKFEYFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVE 274
           EI  M+ R  AL TFS++ N  PK++YF    + K  EL  FPQ+F +SL++RIKPRY  
Sbjct: 388 EIGIMISRYGALYTFSLKENVMPKWDYFQTMDYPK-SELVKFPQFFGYSLQERIKPRYEL 447

Query: 275 TVESGKKVPLSLMLKTTDVEFRELL 300
              SG ++ L+ +L  + +EF +++
Sbjct: 448 VQRSGVRLLLNQVLSLSGIEFEKVV 471

[Close]
BLAST of CsaV3_1G036850 vs. Swiss-Prot
Match: sp|Q84X53|MTEF1_ARATH (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-18
Identity = 68/242 (28.10%), Postives = 103/242 (42.56%), Query Frame = 0 

Query: 61  KEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120
           +EK++ L+ + VD  KAL  NPSL S  + S+ SV + L S G+ +    +I  M P +L
Sbjct: 34  REKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLL 93

Query: 121 TSDVKTDLVPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDL 180
           TSD +++++PV  FLS ++ I                               + LG    
Sbjct: 94  TSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGR 153

Query: 181 EALAYHDSV-XXXXXXXXXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIENNFKPKF 240
           + +   ++V                        R E+  MV+                  
Sbjct: 154 DTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVXXXXXXXXXXXXXXXXXX 213

Query: 241 EYFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELL 300
                 M   ++ELK FPQYF+FSLE++IKPR+    E G  +PLS MLK +D +F   L
Sbjct: 214 XXXXXXMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNHWL 273

Query: 301 AE 302
            E
Sbjct: 274 LE 275

[Close]
BLAST of CsaV3_1G036850 vs. Swiss-Prot
Match: sp|F4JVI3|MTEF5_ARATH (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.6e-09
Identity = 35/85 (41.18%), Postives = 54/85 (63.53%), Query Frame = 0 

Query: 215 EIVGMVLRCPALLTFSIENNFKPKFEYFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVE 274
           EI  M+ R  AL TFS++ N  PK++YF    + K  EL  FPQ+F +SL++RIKPRY  
Sbjct: 388 EIGIMISRYGALYTFSLKENVMPKWDYFQTMDYPK-SELVKFPQFFGYSLQERIKPRYEL 447

Query: 275 TVESGKKVPLSLMLKTTDVEFRELL 300
              SG ++ L+ +L  + +EF +++
Sbjct: 448 VQRSGVRLLLNQVLSLSGIEFEKVV 471

[Close]
BLAST of CsaV3_1G036850 vs. Swiss-Prot
Match: sp|Q9ZT96|MTEF4_ARATH (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.5e-09
Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 0 

Query: 219 MVLRCPALLTFSIENNFKPKFEYFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVES 278
           MV+ CP +L  ++    K  FEYF  EM + L++L DFP +F + LE  +KPR+ + ++ 
Sbjct: 415 MVIGCPQVLALNL-GIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKK 474

Query: 279 GKKVPLSLMLKTTDVEFRELLA 301
           G K  L+ ML  +D +F + ++
Sbjct: 475 GIKCSLAWMLNCSDEKFEQRMS 495

[Close]
BLAST of CsaV3_1G036850 vs. Swiss-Prot
Match: sp|Q6AUK6|MTEF4_ORYSJ (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.0e-08
Identity = 31/84 (36.90%), Postives = 49/84 (58.33%), Query Frame = 0 

Query: 214 SEIVGMVLRCPALLTFSIENNFKPKFEYFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYV 273
           S++  MV+ CP LL  +++   K  FEYF  EM + LEEL +FP +F + LE  ++PR+ 
Sbjct: 375 SQVSKMVVACPQLLALNMD-IMKMSFEYFQNEMERDLEELVEFPAFFTYGLESTVRPRHE 434

Query: 274 ETVESGKKVPLSLMLKTTDVEFRE 298
              + G    L+ +L  +D +F E
Sbjct: 435 MVAKKGFTCSLAWLLNCSDAKFDE 457

[Close]
BLAST of CsaV3_1G036850 vs. Swiss-Prot
Match: sp|B6TGN4|MTEF4_MAIZE (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.9e-08
Identity = 30/84 (35.71%), Postives = 48/84 (57.14%), Query Frame = 0 

Query: 214 SEIVGMVLRCPALLTFSIENNFKPKFEYFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYV 273
           S++  MV+ CP LL  +I+   +  FEYF  EM + LEEL +FP +F + +E  ++PR+ 
Sbjct: 366 SQVSKMVVACPQLLALNID-IMRMNFEYFKNEMERDLEELVEFPAFFTYGIESTVRPRHE 425

Query: 274 ETVESGKKVPLSLMLKTTDVEFRE 298
                G    L+ +L  +D +F E
Sbjct: 426 MVSRKGLTCSLAWLLNCSDAKFDE 448

[Close]
BLAST of CsaV3_1G036850 vs. TrEMBL
Match: tr|A0A0A0LVD4|A0A0A0LVD4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G535790 PE=4 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 8.0e-128
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0 

Query: 1   MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTVSSQT 60
           MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTVSSQT
Sbjct: 1   MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTVSSQT 60

Query: 61  KEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120
           KEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL
Sbjct: 61  KEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120

Query: 121 TSDVKTDLVPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDL 180
           TSDVKTDLVPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDL
Sbjct: 121 TSDVKTDLVPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDL 180

Query: 181 EALAYHDSVXXXXXXXXXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIENNFKPKFE 240
           EALAYHDSVXXXXXXXXXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIENNFKPKFE
Sbjct: 181 EALAYHDSVXXXXXXXXXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIENNFKPKFE 240

Query: 241 YFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELLA 300
           YFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELLA
Sbjct: 241 YFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELLA 300

Query: 301 EGGG 305
           EGGG
Sbjct: 301 EGGG 304

[Close]
BLAST of CsaV3_1G036850 vs. TrEMBL
Match: tr|A0A1S3BBS5|A0A1S3BBS5_CUCME (transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487950 PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 2.9e-125
Identity = 297/304 (97.70%), Postives = 301/304 (99.01%), Query Frame = 0 

Query: 1   MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTVSSQT 60
           MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHST+SSQT
Sbjct: 1   MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTLSSQT 60

Query: 61  KEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120
           KEKILCLEIMGVDSGKALSQNPSLH VTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL
Sbjct: 61  KEKILCLEIMGVDSGKALSQNPSLHCVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120

Query: 121 TSDVKTDLVPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDL 180
           TSDVKTDL+PVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QRLGLKDL
Sbjct: 121 TSDVKTDLIPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQRLGLKDL 180

Query: 181 EALAYHDSVXXXXXXXXXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIENNFKPKFE 240
           EALAYHDSVXXXXXXXXXXXXXXXXXXXXXXXRSE VGMVLRCPALLTFSIENNFKPKFE
Sbjct: 181 EALAYHDSVXXXXXXXXXXXXXXXXXXXXXXXRSETVGMVLRCPALLTFSIENNFKPKFE 240

Query: 241 YFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELLA 300
           YFSVEMH+KLEELKDFPQYFAFSLEKRIKPR+VETVESGKKVPLSLMLKTTDVEFRELLA
Sbjct: 241 YFSVEMHRKLEELKDFPQYFAFSLEKRIKPRHVETVESGKKVPLSLMLKTTDVEFRELLA 300

Query: 301 EGGG 305
           EGGG
Sbjct: 301 EGGG 304

[Close]
BLAST of CsaV3_1G036850 vs. TrEMBL
Match: tr|F6HLU1|F6HLU1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0003g04040 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.2e-84
Identity = 228/303 (75.25%), Postives = 255/303 (84.16%), Query Frame = 0 

Query: 1   MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTVSSQT 60
           M S++ATA+HSS CFS  +  SS PSNSHQPN  L+ KPK +L KHPLYTP HS +S Q 
Sbjct: 49  MPSTAATAYHSSPCFSLQSP-SSLPSNSHQPNNPLTIKPKNVLQKHPLYTPAHSNLSLQF 108

Query: 61  KEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120
           KEKILCLEIMGVDSGKALS NPSLH+ TL SIHS+ISFLQSKGIHQKD  +IFGMCPK+L
Sbjct: 109 KEKILCLEIMGVDSGKALSLNPSLHTATLHSIHSIISFLQSKGIHQKDLGRIFGMCPKLL 168

Query: 121 TSDVKTDLVPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDL 180
           TS+++TDL+PVFNFLS+DLK+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RLG +DL
Sbjct: 169 TSNIRTDLIPVFNFLSQDLKVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLGFQDL 228

Query: 181 EALAYHDSVXXXXXXXXXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIENNFKPKFE 240
           EA       XXXXXXXXXXXXXXXXXXXXXXX    VGMVLRCP L TFS+ENNFKPKFE
Sbjct: 229 EAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGMVLRCPGLFTFSVENNFKPKFE 288

Query: 241 YFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFRELLA 300
           YF  EM   LEELK+FPQYFAFSLEKRIKPR++E V++G KVPL+LMLK+TD EFREL+ 
Sbjct: 289 YFVGEMEGNLEELKEFPQYFAFSLEKRIKPRHMEAVQNGVKVPLALMLKSTDEEFRELMT 348

Query: 301 EGG 304
             G
Sbjct: 349 RHG 350

[Close]
BLAST of CsaV3_1G036850 vs. TrEMBL
Match: tr|M5WGK8|M5WGK8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G085200 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 4.2e-84
Identity = 199/273 (72.89%), Postives = 216/273 (79.12%), Query Frame = 0 

Query: 32  NTSLSPKPKTLLHKHPLYTPLHSTVSSQTKEKILCLEIMGVDSGKALSQNPSLHSVTLES 91
           NT L+ KPK+LL KHPLYTP H+ +S Q KEKILCLEIMGVD+GKALSQNPSLH+ +L S
Sbjct: 38  NTQLAAKPKSLLQKHPLYTPTHTKLSLQFKEKILCLEIMGVDAGKALSQNPSLHTASLHS 97

Query: 92  IHSVISFLQSKGIHQKDFAKIFGMCPKILTSDVKTDLVPVFNFLSEDLKIXXXXXXXXXX 151
           IHS+ISFLQSKGIHQKD  KIFGMCP ILTS +K+DL PVF FLSEDLK+   XXXXXXX
Sbjct: 98  IHSIISFLQSKGIHQKDLPKIFGMCPNILTSSIKSDLNPVFIFLSEDLKVPEHXXXXXXX 157

Query: 152 XXXXXXXXXXXXXXXXXXXXXQRLGLKDLEALAYHDSVXXXXXXXXXXXXXXXXXXXXXX 211
           XXXXXXXXXXXXXXXXXXXXXQRLG KDL+ALAYHDSV                      
Sbjct: 158 XXXXXXXXXXXXXXXXXXXXXQRLGFKDLDALAYHDSVLLVSSVEKTLIPKLEFLQSLGF 217

Query: 212 XRSEIVGMVLRCPALLTFSIENNFKPKFEYFSVEMHKKLEELKDFPQYFAFSLEKRIKPR 271
            R E VGMVLRCP LLTFSIENNF PKFEYFSV+M KKLEELK FPQYFAFSLEKRIKPR
Sbjct: 218 PRDEAVGMVLRCPGLLTFSIENNFTPKFEYFSVDMGKKLEELKQFPQYFAFSLEKRIKPR 277

Query: 272 YVETVESGKKVPLSLMLKTTDVEFRELLAEGGG 305
           + E V+ G +VPL LMLK+TD EFRELL E  G
Sbjct: 278 HKEVVQRGVEVPLPLMLKSTDDEFRELLREFRG 310

[Close]
BLAST of CsaV3_1G036850 vs. TrEMBL
Match: tr|A0A1Q3C4M7|A0A1Q3C4M7_CEPFO (mTERF domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_18492 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 5.4e-84
Identity = 203/306 (66.34%), Postives = 237/306 (77.45%), Query Frame = 0 

Query: 1   MSSSSATAFHSSFCFSSHNKLSSSPSNSHQPNTSLSPKPKTLLHKHPLYTPLHSTVSSQT 60
           M +S ATA H S C SS    S S S   QPNT L+ KPK++LH+HPLYT  H  +S   
Sbjct: 1   MPTSPATALHFSLCLSSQKPTSPSSSAFQQPNTQLAAKPKSILHEHPLYTSTHKNLSLHI 60

Query: 61  KEKILCLEIMGVDSGKALSQNPSLHSVTLESIHSVISFLQSKGIHQKDFAKIFGMCPKIL 120
           KEK+LCLEIMG+DSGKALS NPSLH+ TL+SI S+ISF+QSKGIHQKDF +IFGMCPKIL
Sbjct: 61  KEKVLCLEIMGIDSGKALSLNPSLHTATLDSIQSIISFIQSKGIHQKDFPRIFGMCPKIL 120

Query: 121 TSDVKTDLVPVFNFLSEDLKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGLKDL 180
           TS+++T+L PVFNFLS+DLK+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLG +DL
Sbjct: 121 TSNIRTELNPVFNFLSQDLKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLGFEDL 180

Query: 181 EALAYHDSVXXXXXXXXXXXXXXXXXXXXXXXRSEIVGMVLRCPALLTFSIENNFKPKFE 240
           +ALAY DSV                       R+E V MVLRCPAL TFS++NNF PK+E
Sbjct: 181 DALAYQDSVLLVSNVQNTLIPKLRYLESIGLSRNEAVDMVLRCPALFTFSVDNNFTPKYE 240

Query: 241 YFSVEMHKKLEELKDFPQYFAFSLEKRIKPRYVETVESGKKVPLSLMLKTTDVEFREL-- 300
           YF+ EM +KL ELK+FPQYFAFSLEKRIKPR++E V+SG KVPL LMLK+TD EF EL  
Sbjct: 241 YFAEEMKRKLGELKEFPQYFAFSLEKRIKPRHMEVVQSGVKVPLPLMLKSTDEEFMELIT 300

Query: 301 LAEGGG 305
           L++G G
Sbjct: 301 LSQGAG 306

The following BLAST results are available for this feature:
BLAST of CsaV3_1G036850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004154376.11.2e-127100.00PREDICTED: transcription termination factor 3, mitochondrial [Cucumis sativus] >... [more]
XP_008444692.14.3e-12597.70PREDICTED: transcription termination factor MTEF1, chloroplastic [Cucumis melo][more]
XP_022139889.14.2e-11283.44transcription termination factor MTEF1, chloroplastic [Momordica charantia][more]
XP_022927002.11.7e-10086.62transcription termination factor MTEF1, chloroplastic-like [Cucurbita moschata] ... [more]
XP_023001451.16.3e-10086.62transcription termination factor MTEF1, chloroplastic-like [Cucurbita maxima][more]
BLAST of CsaV3_1G036850 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G34620.11.6e-6870.67Mitochondrial transcription termination factor family protein[more]
AT2G36000.12.9e-2233.33Mitochondrial transcription termination factor family protein[more]
AT3G18870.12.7e-2028.89Mitochondrial transcription termination factor family protein[more]
AT2G03050.16.0e-2028.10Mitochondrial transcription termination factor family protein[more]
AT4G14605.18.7e-1141.18Mitochondrial transcription termination factor family protein[more]
BLAST of CsaV3_1G036850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q84X53|MTEF1_ARATH1.1e-1828.10Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX... [more]
sp|F4JVI3|MTEF5_ARATH1.6e-0941.18Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O... [more]
sp|Q9ZT96|MTEF4_ARATH4.5e-0936.59Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O... [more]
sp|Q6AUK6|MTEF4_ORYSJ1.0e-0836.90Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja... [more]
sp|B6TGN4|MTEF4_MAIZE2.9e-0835.71Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT... [more]
BLAST of CsaV3_1G036850 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LVD4|A0A0A0LVD4_CUCSA8.0e-128100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G535790 PE=4 SV=1[more]
tr|A0A1S3BBS5|A0A1S3BBS5_CUCME2.9e-12597.70transcription termination factor MTEF1, chloroplastic OS=Cucumis melo OX=3656 GN... [more]
tr|F6HLU1|F6HLU1_VITVI3.2e-8475.25Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0003g04040 PE=4 SV=... [more]
tr|M5WGK8|M5WGK8_PRUPE4.2e-8472.89Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G085200 PE=4 SV=1[more]
tr|A0A1Q3C4M7|A0A1Q3C4M7_CEPFO5.4e-8466.34mTERF domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_18... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR038538MTERF_sf
IPR003690MTERF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008299 isoprenoid biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009507 chloroplast
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G036850.1CsaV3_1G036850.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 217..249
e-value: 0.0016
score: 27.7
coord: 75..105
e-value: 7.1
score: 15.6
coord: 181..212
e-value: 0.3
score: 20.1
coord: 147..178
e-value: 3.3E-4
score: 30.0
coord: 110..142
e-value: 0.016
score: 24.4
coord: 250..283
e-value: 0.77
score: 18.8
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 150..295
e-value: 2.4E-32
score: 112.1
coord: 51..179
e-value: 3.1E-11
score: 42.7
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3DG3DSA:1.25.70.10coord: 44..185
e-value: 3.0E-22
score: 81.0
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 2..299
NoneNo IPR availablePANTHERPTHR13068:SF78MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEINcoord: 2..299