CsaV3_1G034400 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G034400
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 21556529 .. 21558136 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGGTTCATCTGGTAGACAAGAACCGGTCTTTAGGTGGTTTTAGTCACCGGTTATAGCCGGTAAACTAAGAGGCAAACTTACCGATAGGTCCGGTGAAGAGGGTCAATGGTATAAGATAGCTGGGGTTTAAGCATTATGTGTTTAGGTGGTTTTTCAAAGGGTTTTGGCGATCGGAATTTTTATTTTTACTGAGAGAAGAAGAAGAAGAAAAAAATAAAAGGAAAATAAATTTAGTTTTCAAACTTTGTTTTTGGTTTGGTGTTGGGAATTTTTATTTTTTCTTTTGGATTAAAGCGAAAAATTTAAAAAGAAAAAAAAGGAGATGGGATAGAAAACGAGAGAATGTGGTGAATCAATCAAAGCCAATCCTTGTTTTGTTCTTCGATTTCATTTCTAATTTTTTACAGATCTCTTTTTCGCTTGCATTTGGTGGTGTTTTTCGCCGGAATTTCGTTTTCCGGTGATGAGGATTTGAAATTCGTTTTGTTTCAGGTGAGTCATCATAATCGTTTTTTTTTTTCACCCATTTTTGTGTTGATAGTTCTTTCTTTCGTCGTTTCTAATGGATGTGTTGGTGGGGTTTTTTTTTTCTTCAGAACAGTGCATTTGGATTTTAGACAAAAACCTTGGGATTAGGGACCTGAATTTGGAAGATTTAATCTCCAATTTCGTTTCAGTATTGTCGTTTGTTGAGAATTTTTGGTTTTTATTCTTTTTAATATCTGATGATGATCACACTCGAATGGGGTTTTTTATTGGGTTTCTGGGTATCCAATTTGTGCTCTGTGAGATTCGATCTCTGATTCTGCATCAATTTTCTTCTTTTTTTTTTATTTATAATTTTGTGGGTGATCGAAAATTTTCGATTTTTCTGTTACCAGTTCTTGAATTTCGATGAAATTTCAGCTGTTTGGTGATTCCTGCTTGGATGTGAGGAACCATCTCTTTCTCATGGATTTATGTTTTCTCTTCGTCTTCGATCATCTACTCAAGGGTTTTGTTGTGGTTTGTCATCAATTTATTAATTTATAGTTTTTTTCCGGTTAACGAGTAACAACATATCTTTCTTAATATTTTCTCTCTAAAATTCTTTCTGGGTTGGATTTTGAAATTTACTATTACTGCATGTCACTTTATTTCTGATGCTTGTGTAACTCTATTGCATGAGGTTTTACTTTTACCCTTTCTGGAACTCTTCGATTGCTTCATCCCGTCATCACTAAAGATTGTTGAAATTTGGGTTTTAGTTAGATCATCAGCCTCTCTTGAAATTTTAATTATGGGTCATTGCTCCTTATATTTGTTTGTGTGGGTGTGCGTGAATGAGTTTGGTTGGATTGAATAGAAGCATTGGACTTGTGATGTGAAGGCCTGGAATTGCCTCAGGACTTTTGTTTTGATTTGTCTTCCTCGAATGTCGAAGCATGATTCGTCTTTTCAATTTAATTTCTCTAGTTTGTGAGAAGAGATCCAGTTTGAGTTCAGGATACGGCATTCGATCCTTGCTAGTTTGTGTGATTTGATGTTCTTAACCAATAAACTAAATAAAATCTGATTCATTTCTTTTTCTTTTCAGGAATTAATCTGTATTTTGACATTGTGA

mRNA sequence

ATGGTGGGTTCATCTGGTAGACAAGAACCGGTCTTTAGATCTCTTTTTCGCTTGCATTTGGTGGTGTTTTTCGCCGGAATTTCGTTTTCCGGTGATGAGGATTTGAAATTCGTTTTGTTTCAGGAATTAATCTGTATTTTGACATTGTGA

Coding sequence (CDS)

ATGGTGGGTTCATCTGGTAGACAAGAACCGGTCTTTAGATCTCTTTTTCGCTTGCATTTGGTGGTGTTTTTCGCCGGAATTTCGTTTTCCGGTGATGAGGATTTGAAATTCGTTTTGTTTCAGGAATTAATCTGTATTTTGACATTGTGA

Protein sequence

MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKFVLFQELICILTL
BLAST of CsaV3_1G034400 vs. NCBI nr
Match: KGN65735.1 (hypothetical protein Csa_1G523100 [Cucumis sativus])

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0

Query: 1  MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKFVLFQELICILTL 50
          MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKFVLFQELICILTL
Sbjct: 1  MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKFVLFQELICILTL 49

BLAST of CsaV3_1G034400 vs. TrEMBL
Match: tr|A0A0A0LUX2|A0A0A0LUX2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523100 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.5e-18
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0

Query: 1  MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKFVLFQELICILTL 50
          MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKFVLFQELICILTL
Sbjct: 1  MVGSSGRQEPVFRSLFRLHLVVFFAGISFSGDEDLKFVLFQELICILTL 49

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN65735.12.2e-18100.00hypothetical protein Csa_1G523100 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LUX2|A0A0A0LUX2_CUCSA1.5e-18100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G523100 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G034400.1CsaV3_1G034400.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G034400Lsi02G013470Bottle gourd (USVL1VR-Ls)cuclsiB031
CsaV3_1G034400Cla97C03G052300Watermelon (97103) v2cucwmbB042
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G034400Cucumber (Chinese Long) v3cuccucB024
CsaV3_1G034400Cucumber (Chinese Long) v3cuccucB029
CsaV3_1G034400Cucumber (Chinese Long) v3cuccucB038
CsaV3_1G034400Cucumber (Chinese Long) v3cuccucB049
CsaV3_1G034400Silver-seed gourdcarcucB0177
CsaV3_1G034400Silver-seed gourdcarcucB0336
CsaV3_1G034400Silver-seed gourdcarcucB0364
CsaV3_1G034400Silver-seed gourdcarcucB0414
CsaV3_1G034400Silver-seed gourdcarcucB0472
CsaV3_1G034400Silver-seed gourdcarcucB1040
CsaV3_1G034400Cucumber (Gy14) v2cgybcucB001
CsaV3_1G034400Cucumber (Gy14) v2cgybcucB105
CsaV3_1G034400Cucumber (Gy14) v2cgybcucB163
CsaV3_1G034400Cucumber (Gy14) v2cgybcucB253
CsaV3_1G034400Cucumber (Gy14) v1cgycucB055
CsaV3_1G034400Cucumber (Gy14) v1cgycucB157
CsaV3_1G034400Cucumber (Gy14) v1cgycucB207
CsaV3_1G034400Cucumber (Gy14) v1cgycucB261
CsaV3_1G034400Cucumber (Gy14) v1cgycucB280
CsaV3_1G034400Cucurbita maxima (Rimu)cmacucB0250
CsaV3_1G034400Cucurbita maxima (Rimu)cmacucB0512
CsaV3_1G034400Cucurbita maxima (Rimu)cmacucB0648
CsaV3_1G034400Cucurbita maxima (Rimu)cmacucB0692
CsaV3_1G034400Cucurbita maxima (Rimu)cmacucB0820
CsaV3_1G034400Cucurbita moschata (Rifu)cmocucB0236
CsaV3_1G034400Cucurbita moschata (Rifu)cmocucB0262
CsaV3_1G034400Cucurbita moschata (Rifu)cmocucB0500
CsaV3_1G034400Cucurbita moschata (Rifu)cmocucB0633
CsaV3_1G034400Cucurbita moschata (Rifu)cmocucB0677
CsaV3_1G034400Cucurbita moschata (Rifu)cmocucB0805
CsaV3_1G034400Cucurbita pepo (Zucchini)cpecucB0331
CsaV3_1G034400Cucurbita pepo (Zucchini)cpecucB0477
CsaV3_1G034400Cucurbita pepo (Zucchini)cpecucB0625
CsaV3_1G034400Cucurbita pepo (Zucchini)cpecucB0664
CsaV3_1G034400Cucurbita pepo (Zucchini)cpecucB0875
CsaV3_1G034400Wild cucumber (PI 183967)cpicucB000
CsaV3_1G034400Wild cucumber (PI 183967)cpicucB130
CsaV3_1G034400Wild cucumber (PI 183967)cpicucB201
CsaV3_1G034400Wild cucumber (PI 183967)cpicucB257
CsaV3_1G034400Wild cucumber (PI 183967)cpicucB314
CsaV3_1G034400Bottle gourd (USVL1VR-Ls)cuclsiB018
CsaV3_1G034400Bottle gourd (USVL1VR-Ls)cuclsiB001
CsaV3_1G034400Bottle gourd (USVL1VR-Ls)cuclsiB058
CsaV3_1G034400Melon (DHL92) v3.5.1cucmeB007
CsaV3_1G034400Melon (DHL92) v3.5.1cucmeB003
CsaV3_1G034400Melon (DHL92) v3.5.1cucmeB025
CsaV3_1G034400Melon (DHL92) v3.5.1cucmeB067
CsaV3_1G034400Melon (DHL92) v3.5.1cucmeB090
CsaV3_1G034400Melon (DHL92) v3.6.1cucmedB028
CsaV3_1G034400Melon (DHL92) v3.6.1cucmedB003
CsaV3_1G034400Melon (DHL92) v3.6.1cucmedB007
CsaV3_1G034400Melon (DHL92) v3.6.1cucmedB023
CsaV3_1G034400Melon (DHL92) v3.6.1cucmedB063
CsaV3_1G034400Watermelon (Charleston Gray)cucwcgB005
CsaV3_1G034400Watermelon (Charleston Gray)cucwcgB034
CsaV3_1G034400Watermelon (Charleston Gray)cucwcgB051
CsaV3_1G034400Watermelon (Charleston Gray)cucwcgB065
CsaV3_1G034400Watermelon (Charleston Gray)cucwcgB096
CsaV3_1G034400Watermelon (97103) v1cucwmB006
CsaV3_1G034400Watermelon (97103) v1cucwmB026
CsaV3_1G034400Watermelon (97103) v1cucwmB040
CsaV3_1G034400Watermelon (97103) v1cucwmB072
CsaV3_1G034400Watermelon (97103) v1cucwmB079
CsaV3_1G034400Watermelon (97103) v2cucwmbB014
CsaV3_1G034400Watermelon (97103) v2cucwmbB026
CsaV3_1G034400Watermelon (97103) v2cucwmbB083
CsaV3_1G034400Wax gourdcucwgoB021
CsaV3_1G034400Wax gourdcucwgoB050