CsaV3_1G034120 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGAAGATTAATCTCCCAGCTCTCATCACCCTTCTTGCAGCACTTGTAACAATAATGTCCCTCATCATCATACCATCCTCTCAAGCTACCACTTCATGTGAACCCCCACATCGAGTAAGTTTATTTTTATTTCAAAAATCTCCCTTCAAACCTCATTAATATAATTCTTTTATTTCATTCTTCCCTATTTCTTTCATTATTCAGATTGTTTCTCAAGAGCTCGTCGCTGATCAAAATAACGATGAACCATGTGAAGGACCAGGGAAAGAAGATTGTCTTATTCGAAGAACCTTACAGGCTCATACTGATTACGTTTATACTTGTGATAATCCAACCAACCCATGA ATGTGGAAGATTAATCTCCCAGCTCTCATCACCCTTCTTGCAGCACTTGTAACAATAATGTCCCTCATCATCATACCATCCTCTCAAGCTACCACTTCATGTGAACCCCCACATCGAATTGTTTCTCAAGAGCTCGTCGCTGATCAAAATAACGATGAACCATGTGAAGGACCAGGGAAAGAAGATTGTCTTATTCGAAGAACCTTACAGGCTCATACTGATTACGTTTATACTTGTGATAATCCAACCAACCCATGA ATGTGGAAGATTAATCTCCCAGCTCTCATCACCCTTCTTGCAGCACTTGTAACAATAATGTCCCTCATCATCATACCATCCTCTCAAGCTACCACTTCATGTGAACCCCCACATCGAATTGTTTCTCAAGAGCTCGTCGCTGATCAAAATAACGATGAACCATGTGAAGGACCAGGGAAAGAAGATTGTCTTATTCGAAGAACCTTACAGGCTCATACTGATTACGTTTATACTTGTGATAATCCAACCAACCCATGA MWKINLPALITLLAALVTIMSLIIIPSSQATTSCEPPHRIVSQELVADQNNDEPCEGPGKEDCLIRRTLQAHTDYVYTCDNPTNP
BLAST of CsaV3_1G034120 vs. NCBI nr
Match: KGN62431.1 (hypothetical protein Csa_2G354080 [Cucumis sativus]) HSP 1 Score: 97.8 bits (242), Expect = 1.9e-17 Identity = 51/81 (62.96%), Postives = 57/81 (70.37%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. NCBI nr
Match: PON40330.1 (Phytosulfokine [Parasponia andersonii]) HSP 1 Score: 60.8 bits (146), Expect = 2.5e-06 Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. NCBI nr
Match: XP_023546620.1 (phytosulfokines-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 58.9 bits (141), Expect = 9.6e-06 Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. NCBI nr
Match: POO00668.1 (Phytosulfokine [Trema orientalis]) HSP 1 Score: 58.9 bits (141), Expect = 9.6e-06 Identity = 27/53 (50.94%), Postives = 34/53 (64.15%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. NCBI nr
Match: Q9FS10.1 (RecName: Full=Phytosulfokines; Contains: RecName: Full=Phytosulfokine-alpha; Short=PSK-alpha; Short=Phytosulfokine-a; Contains: RecName: Full=Phytosulfokine-beta; Short=PSK-beta; Short=Phytosulfokine-b; Flags: Precursor >BAB20706.1 preprophytosulfokine [Asparagus officinalis]) HSP 1 Score: 58.2 bits (139), Expect = 1.6e-05 Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. TAIR10
Match: AT3G49780.1 (phytosulfokine 4 precursor) HSP 1 Score: 46.6 bits (109), Expect = 9.0e-06 Identity = 24/66 (36.36%), Postives = 36/66 (54.55%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. TAIR10
Match: AT5G65870.1 (phytosulfokine 5 precursor) HSP 1 Score: 44.7 bits (104), Expect = 3.4e-05 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. TAIR10
Match: AT2G22860.1 (phytosulfokine 2 precursor) HSP 1 Score: 42.4 bits (98), Expect = 1.7e-04 Identity = 31/80 (38.75%), Postives = 42/80 (52.50%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. TAIR10
Match: AT4G37720.1 (phytosulfokine 6 precursor) HSP 1 Score: 42.0 bits (97), Expect = 2.2e-04 Identity = 31/83 (37.35%), Postives = 44/83 (53.01%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. Swiss-Prot
Match: sp|Q9FS10|PSK_ASPOF (Phytosulfokines OS=Asparagus officinalis OX=4686 GN=PSK PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 5.4e-08 Identity = 31/74 (41.89%), Postives = 46/74 (62.16%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. Swiss-Prot
Match: sp|Q9M2Y0|PSK3_ARATH (Phytosulfokines 3 OS=Arabidopsis thaliana OX=3702 GN=PSK3 PE=2 SV=2) HSP 1 Score: 46.6 bits (109), Expect = 1.6e-04 Identity = 24/66 (36.36%), Postives = 36/66 (54.55%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. Swiss-Prot
Match: sp|Q9AR88|PSK4_ORYSJ (Phytosulfokines 4 OS=Oryza sativa subsp. japonica OX=39947 GN=PSK4 PE=1 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 6.2e-04 Identity = 17/23 (73.91%), Postives = 20/23 (86.96%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. Swiss-Prot
Match: sp|Q9FEB4|PSK5_ARATH (Phytosulfokines 5 OS=Arabidopsis thaliana OX=3702 GN=PSK5 PE=2 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 6.2e-04 Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. TrEMBL
Match: tr|A0A0A0LR23|A0A0A0LR23_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G354080 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 1.2e-17 Identity = 51/81 (62.96%), Postives = 57/81 (70.37%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. TrEMBL
Match: tr|A0A2P5AUV2|A0A2P5AUV2_PARAD (Phytosulfokine OS=Parasponia andersonii OX=3476 GN=PanWU01x14_298170 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.7e-06 Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. TrEMBL
Match: tr|A0A2P5FS83|A0A2P5FS83_9ROSA (Phytosulfokine OS=Trema orientalis OX=63057 GN=TorRG33x02_032990 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 6.4e-06 Identity = 27/53 (50.94%), Postives = 34/53 (64.15%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. TrEMBL
Match: tr|A0A2J6K3U5|A0A2J6K3U5_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_5X117161 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.4e-05 Identity = 27/69 (39.13%), Postives = 40/69 (57.97%), Query Frame = 0
BLAST of CsaV3_1G034120 vs. TrEMBL
Match: tr|I1LEC9|I1LEC9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100800220 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 5.4e-05 Identity = 24/53 (45.28%), Postives = 38/53 (71.70%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |