CsaV3_1G033950 (gene) Cucumber (Chinese Long) v3

NameCsaV3_1G033950
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr1 : 21137848 .. 21138015 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGGAAGGGGCAATTTTCGTACTGGGAGAAGATGGTCGACAACGGTGTCGAACAGAGGAAGGAGCGGCAGAAGCTTTCTTGGACCAGTCTCTTCAATGTGGCAGACAAAGGTCGGGATCCCTCTTTAGATCTACGAAATTGCATATCTAAAGAAGGTTTTTAA

mRNA sequence

ATGGAGAGGAAGGGGCAATTTTCGTACTGGGAGAAGATGGTCGACAACGGTGTCGAACAGAGGAAGGAGCGGCAGAAGCTTTCTTGGACCAGTCTCTTCAATGTGGCAGACAAAGGTCGGGATCCCTCTTTAGATCTACGAAATTGCATATCTAAAGAAGGTTTTTAA

Coding sequence (CDS)

ATGGAGAGGAAGGGGCAATTTTCGTACTGGGAGAAGATGGTCGACAACGGTGTCGAACAGAGGAAGGAGCGGCAGAAGCTTTCTTGGACCAGTCTCTTCAATGTGGCAGACAAAGGTCGGGATCCCTCTTTAGATCTACGAAATTGCATATCTAAAGAAGGTTTTTAA

Protein sequence

MERKGQFSYWEKMVDNGVEQRKERQKLSWTSLFNVADKGRDPSLDLRNCISKEGF
BLAST of CsaV3_1G033950 vs. NCBI nr
Match: KGN65699.1 (hypothetical protein Csa_1G502870 [Cucumis sativus])

HSP 1 Score: 118.2 bits (295), Expect = 8.7e-24
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0

Query: 1  MERKGQFSYWEKMVDNGVEQRKERQKLSWTSLFNVADKGRDPSLDLRNCISKEGF 56
          MERKGQFSYWEKMVDNGVEQRKERQKLSWTSLFNVADKGRDPSLDLRNCISKEGF
Sbjct: 1  MERKGQFSYWEKMVDNGVEQRKERQKLSWTSLFNVADKGRDPSLDLRNCISKEGF 55

BLAST of CsaV3_1G033950 vs. TrEMBL
Match: tr|A0A0A0LXC7|A0A0A0LXC7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G502870 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 5.8e-24
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0

Query: 1  MERKGQFSYWEKMVDNGVEQRKERQKLSWTSLFNVADKGRDPSLDLRNCISKEGF 56
          MERKGQFSYWEKMVDNGVEQRKERQKLSWTSLFNVADKGRDPSLDLRNCISKEGF
Sbjct: 1  MERKGQFSYWEKMVDNGVEQRKERQKLSWTSLFNVADKGRDPSLDLRNCISKEGF 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN65699.18.7e-24100.00hypothetical protein Csa_1G502870 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LXC7|A0A0A0LXC7_CUCSA5.8e-24100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G502870 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G033950.1CsaV3_1G033950.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G033950CSPI01G22840Wild cucumber (PI 183967)cpicucB000
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G033950Cucumber (Chinese Long) v3cuccucB029
CsaV3_1G033950Silver-seed gourdcarcucB0336
CsaV3_1G033950Silver-seed gourdcarcucB0364
CsaV3_1G033950Silver-seed gourdcarcucB0414
CsaV3_1G033950Silver-seed gourdcarcucB0472
CsaV3_1G033950Cucumber (Gy14) v2cgybcucB001
CsaV3_1G033950Cucumber (Gy14) v2cgybcucB163
CsaV3_1G033950Cucumber (Gy14) v1cgycucB055
CsaV3_1G033950Cucumber (Gy14) v1cgycucB333
CsaV3_1G033950Cucurbita maxima (Rimu)cmacucB0250
CsaV3_1G033950Cucurbita maxima (Rimu)cmacucB0512
CsaV3_1G033950Cucurbita maxima (Rimu)cmacucB0648
CsaV3_1G033950Cucurbita moschata (Rifu)cmocucB0236
CsaV3_1G033950Cucurbita moschata (Rifu)cmocucB0500
CsaV3_1G033950Cucurbita moschata (Rifu)cmocucB0633
CsaV3_1G033950Cucurbita moschata (Rifu)cmocucB0677
CsaV3_1G033950Cucurbita pepo (Zucchini)cpecucB0331
CsaV3_1G033950Cucurbita pepo (Zucchini)cpecucB0625
CsaV3_1G033950Cucurbita pepo (Zucchini)cpecucB0664
CsaV3_1G033950Cucurbita pepo (Zucchini)cpecucB0875
CsaV3_1G033950Wild cucumber (PI 183967)cpicucB201
CsaV3_1G033950Bottle gourd (USVL1VR-Ls)cuclsiB018
CsaV3_1G033950Bottle gourd (USVL1VR-Ls)cuclsiB031
CsaV3_1G033950Melon (DHL92) v3.5.1cucmeB007
CsaV3_1G033950Melon (DHL92) v3.5.1cucmeB025
CsaV3_1G033950Melon (DHL92) v3.5.1cucmeB090
CsaV3_1G033950Melon (DHL92) v3.6.1cucmedB007
CsaV3_1G033950Melon (DHL92) v3.6.1cucmedB023
CsaV3_1G033950Watermelon (Charleston Gray)cucwcgB051
CsaV3_1G033950Watermelon (Charleston Gray)cucwcgB065
CsaV3_1G033950Watermelon (97103) v1cucwmB026
CsaV3_1G033950Watermelon (97103) v1cucwmB072
CsaV3_1G033950Watermelon (97103) v2cucwmbB042
CsaV3_1G033950Wax gourdcucwgoB021
CsaV3_1G033950Wax gourdcucwgoB050