CsaV3_1G033580 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G033580
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionActin depolymerizing factor-like protein
Locationchr1 : 20653295 .. 20656607 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTTGGGTGTGGTTTGGGGCTGACCAAAGCTCATGTTTTTCAATGTCCCGATCGCTGGTTCTCTTATCCTCCTTTGATCACTTGATCTTGATTGGAGAACAAGATAAAAAAAAAAAAAAAAAGCTCACAACTTGTATCCAAACTTTGAATAAAATTCTCCATTTTCTTGAAGCATAAAATTGAAAACGTCCTTTACACCCACCCGATGGCATCCAAACCCCACAAGAGAGAGAGAGAGAAAGAAAGAAAGAGAGAAAGCTGACCAAGAAAGCAACATCTGTCAGGGGCAAAATGATAATTTCACAAAGAAACACGTGTCATGAGATAATTGGAGTAACTGGCTCCAACTCCGCTGTCGCGCATGACCGCCATCATGATATTACGGAAAAAGTAAAGCCACCGTTTACCAAGAGAGCGAGAGAGAGAAGAATATCACAAAAACATTTTCCCGATTTCTTCTCTTACCACCAATCTCACACCTAAACATTGTTCTTCCTCTTCTTTCTCCCTAGATCTTCTGATTCAACTCCTCTTCTCCAGTTTCAGCCATGGTGAGACTCCTTTTTTCTCTGATTTCTCTGATTTTCACTTCATTTTGTACTCTTTTTTTGCTTTATTTTCATCGCTCTTGCTTCTAGATGTCATTTTACCACCTACCTGTTCTGGATCTGATTTATGATCTTGCTTTGATCTAGATCGTTTTGGTTTTTTTTTCTCCGATTTGCTCAGGATCAGATGTCGTTGATTTTAATTTCGATTTTTTTTTATTGATTTCAGTCTCATCGGAACTAGTTTCTGTTGATTACTGATTACCGCTGTTTATTAGTTATTAGGAATTAATCGTTTGCGTTCTAGTTGGGTTGGGAGCTGGGATTTGGTGTTCTTCTGCTTGGTTCTGTGGATTTAGATGTTTTTTTTGTGATTTAGATGTTTGCGTATGTTATCAGCTATCAGGATGTTAATCTTGTGAAATGAACTGAGTGCATGTATGATTGTTGATTGCTGATAATCGGTTACTTGGTGGCGGCAGGGTCTGTGGACCGAATAAGTCCTCAACTGCCATGGTGAAATAGAGGGAAGGATTTGGAATGAAATGGATTTTTGATATTTTATCATGATGCCTACTTTGAATTTTCAATATTCTATCAAGTTTTGATAAGTTGGAAGAATTGTTTTCTTGAGAATCTAAATGTAATGCTAGTACAAAATAGGCAACTGCTCGTTTATGCCTAAAACAATGGATGTGATCTCAATGATTGTGAGAATAGACTCTAAAAAAAAACCTTGTGGAGATCATACTGATAACCAATCAGGTTCTATAAATGTCTAACTTAAAGAGGAATTGTACTAAATGTGATTTGACAGTGTGAATTCTTTAGGCATTTGATTTTGCTTACTTTTTACAGCTTTGACTTCTTTGCCCTTGAATTATATTTTCATTTTCTTCCAATTGTTTTTCTGCAGGCTAACGCGGCATCTGGTATGGCTGTTCATGATGACTGTAAGCTTAAATTCTTGGAGCTGAAGACCAAGAGAACTTACAGATACATTGTATATAAGATTGAAGAGAAGCAAAAGCAAGTCACTGTGGAAAAGCTTGGCGAGCCAGGTCAAAGCTATGAAGACTTCACGGCCTGTCTTCCTGCTGATGAATGCCGATATGCCGTTTATGATTTTGAGTTTCTGACAGAAGGGAATGTTCCCAAGAGCAGAATTTTCTTCATTGCTTGGTAATGTTATGATGGAAAATGAAACAAATTCTGTGTAACTATCTGTTTCTCACTCACTTACCATCTTTAGCTTCCATTGCTCATAATCACTATTTTCTTTTCATGTTGTAAAGGTCTCCTGACACATCAAAGGTAAGAAGCAAGATGATTTATGCAAGTTCAAAGGACAAGTTTAGAAGAGAATTGGATGGCATTCAAATTGAGCTCCAAGCTACTGACCCTTCTGAAATGGATCTCGATGTTTTTAAAAGCCGTGCCAAATGAGGCTTCCTCATTTTCAAACTTCTTGTGGTGTCTGTTTTACATTGTGAAATGATGTTATTAATTGCTGGGTTTATGGATGTGCTTTGATTACACATTGGGTTGTTTTTAAGTTTTGTCTTATAGAATTATGTCCATCTGGAACAATCTTCGGTCATTTCCCCCCCTCCTTATATTGTATGATTTATCGTGTGGAATTAATGCAATATCTCCTTATGTAACGCTACATGATTTTGGTCAGGAACATTATCCTTTTATCATGCACAACACGTCTAAGATGATGTTTGACCTTTTTGTTTTAGATTCAAGGATGCTTCTGAGTAGAATGGTTGCAATGGCTATTTTACTCTTTCTACAGAACACGGCAGCATGGGCTTTTCTAACCAGGTTGACTCGATTCTCATTTGGTAGCTCCTGTCTTCTTTAATCTTGATCTCTGTTATCAGTTACTTGAATGCTTTAGATGGGTTGTCTTGAGAAATTAGTCGAGATGTGGCTAAGTTGGCTAGAACACTCATGAGATATAAAAATAAACATTTGGGCGATTAACTATGTCCTATTCTTTTGGTACTAGAATCTGCTTGGTAGATTGTCTTTTGACTGCCCAAGTGTAATTATTTCAAGAAAATGTTCTAATTATTTCAAGAAGATAGACTCTTTCAGCCTTCTTTACTTAAATCCAGATAGGTTGAGTTTATAAATATTATGTTAGGAGTTTTCAGGGCTGACCTTGAACCTAGTATTTCCTTTACAACAGGTTTAAGAAGAAAACAAGGATAGAAAATTAACACATCAAATATCTGTGTTCTACTAATAAGATTAAATCTTGTAGAGGATAATCTTAGAGTTCTTCATTGTTCTCTCCATGAAAAATACTCTTTGAACACACTGCCATATTTGTCTCGTACTTCTTAGAAATGAAGCTGAAATGATTTGGTTAGGAGAATTTTAGAAATTTTCTATTCGTGCATACCAATGTCTAGCTTTACTGTAGTTTAGAGTAACCCACAGTACTATGTTAGCACAATTTTCTTCGGTTCTTGGGTTTATCTTGTATTATGATGTTCTTCTGCTCCTTATCTCTATCTTCTCACTTCTAAACTCCGAATTGACCTTCCAACAAGTCTCCAATTGAGTAGATAGTATCTTCTTCCACTCTCGGCTCTATCTCCTATTACAATGTCTCTTACTGAGTTGGTACTATCTTTTTAAAACTTTTATGGAATAATGTGGACAAAATAGCACAAAAAGCACTCAGGATAAGATGACTTCAACACCACTAATTATAACTGTTATATAAATTTCACTTTTGGAAAACTTT

mRNA sequence

ATGGCTGTTCATGATGACTGTAAGCTTAAATTCTTGGAGCTGAAGACCAAGAGAACTTACAGATACATTGTATATAAGATTGAAGAGAAGCAAAAGCAAGTCACTGTGGAAAAGCTTGGCGAGCCAGGTCAAAGCTATGAAGACTTCACGGCCTGTCTTCCTGCTGATGAATGCCGATATGCCGTTTATGATTTTGAGTTTCTGACAGAAGGGAATGTTCCCAAGAGCAGAATTTTCTTCATTGCTTGGTCTCCTGACACATCAAAGGTAAGAAGCAAGATGATTTATGCAAGTTCAAAGGACAAGTTTAGAAGAGAATTGGATGGCATTCAAATTGAGCTCCAAGCTACTGACCCTTCTGAAATGGATCTCGATGTTTTTAAAAGCCGTGCCAAATGA

Coding sequence (CDS)

ATGGCTGTTCATGATGACTGTAAGCTTAAATTCTTGGAGCTGAAGACCAAGAGAACTTACAGATACATTGTATATAAGATTGAAGAGAAGCAAAAGCAAGTCACTGTGGAAAAGCTTGGCGAGCCAGGTCAAAGCTATGAAGACTTCACGGCCTGTCTTCCTGCTGATGAATGCCGATATGCCGTTTATGATTTTGAGTTTCTGACAGAAGGGAATGTTCCCAAGAGCAGAATTTTCTTCATTGCTTGGTCTCCTGACACATCAAAGGTAAGAAGCAAGATGATTTATGCAAGTTCAAAGGACAAGTTTAGAAGAGAATTGGATGGCATTCAAATTGAGCTCCAAGCTACTGACCCTTCTGAAATGGATCTCGATGTTTTTAAAAGCCGTGCCAAATGA

Protein sequence

MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPSEMDLDVFKSRAK
Homology
[Close]
BLAST of CsaV3_1G033580 vs. NCBI nr
Match: XP_004149045.1 (PREDICTED: actin-depolymerizing factor 2 [Cucumis sativus] >KGN65663.1 hypothetical protein Csa_1G480180 [Cucumis sativus])

HSP 1 Score: 269.2 bits (687), Expect = 7.3e-69
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY
Sbjct: 8   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS
Sbjct: 68  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 127

Query: 121 EMDLDVFKSRAK 133
           EMDLDVFKSRAK
Sbjct: 128 EMDLDVFKSRAK 139

[Close]
BLAST of CsaV3_1G033580 vs. NCBI nr
Match: XP_008457551.1 (PREDICTED: actin-depolymerizing factor 2 [Cucumis melo] >ADN34239.1 actin depolymerizing factor-like protein [Cucumis melo subsp. melo])

HSP 1 Score: 266.5 bits (680), Expect = 4.7e-68
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKLKFLELKTKRTYR+IVYKIEEKQKQVTVEK+GEPGQSYEDFTACLPADECRY
Sbjct: 8   MAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVTVEKVGEPGQSYEDFTACLPADECRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS
Sbjct: 68  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 127

Query: 121 EMDLDVFKSRAK 133
           EMDLDVFKSRAK
Sbjct: 128 EMDLDVFKSRAK 139

[Close]
BLAST of CsaV3_1G033580 vs. NCBI nr
Match: XP_022964654.1 (actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_022970372.1 actin-depolymerizing factor 2-like [Cucurbita maxima] >XP_023519424.1 actin-depolymerizing factor 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.4 bits (646), Expect = 4.1e-64
Identity = 124/132 (93.94%), Postives = 128/132 (96.97%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKLKFLELKTKRTYR+IVYKIEEKQKQV VEK+GEPGQSYEDFTACLPADECRY
Sbjct: 8   MAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLPADECRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           AVYDF+FLT+ NV KSRIFFIAWSPD SKVRSKMIYASSKDKFRRELDGIQIELQATDPS
Sbjct: 68  AVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 127

Query: 121 EMDLDVFKSRAK 133
           EMDLDVFKSRAK
Sbjct: 128 EMDLDVFKSRAK 139

[Close]
BLAST of CsaV3_1G033580 vs. NCBI nr
Match: XP_022156171.1 (actin-depolymerizing factor 2 [Momordica charantia])

HSP 1 Score: 250.0 bits (637), Expect = 4.6e-63
Identity = 123/132 (93.18%), Postives = 126/132 (95.45%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQV VEKLGEPGQSYEDFTACLPADECRY
Sbjct: 8   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKLGEPGQSYEDFTACLPADECRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           AVYDF+FLT+ NV KSRIFFIAWSPD SKVRSKMIYASSKDKFRRELDGIQIELQATDP+
Sbjct: 68  AVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIELQATDPT 127

Query: 121 EMDLDVFKSRAK 133
           EM LDVF SRAK
Sbjct: 128 EMGLDVFNSRAK 139

[Close]
BLAST of CsaV3_1G033580 vs. NCBI nr
Match: XP_019177333.1 (PREDICTED: actin-depolymerizing factor 2-like [Ipomoea nil])

HSP 1 Score: 246.9 bits (629), Expect = 3.9e-62
Identity = 118/131 (90.08%), Postives = 127/131 (96.95%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKLKFLELKTKR YR+IVYKIEEKQKQV VEKLGEP QSY+DFTACLPADECRY
Sbjct: 8   MAVHDDCKLKFLELKTKRAYRFIVYKIEEKQKQVIVEKLGEPAQSYDDFTACLPADECRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           AVYDF+FLTE +VPKSRIFFIAWSPDT+KVRSKMIYASSKD+F+RELDGIQ+ELQATDP+
Sbjct: 68  AVYDFDFLTEESVPKSRIFFIAWSPDTAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMDLDVFKSRA 132
           EMDLDVFKSRA
Sbjct: 128 EMDLDVFKSRA 138

[Close]
BLAST of CsaV3_1G033580 vs. TAIR10
Match: AT5G59880.1 (actin depolymerizing factor 3)

HSP 1 Score: 224.9 bits (572), Expect = 2.9e-59
Identity = 103/131 (78.63%), Postives = 123/131 (93.89%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKLKF+ELKTKRT+R+I+YKIEE QKQV VEK+GEPGQ++ED  A LPADECRY
Sbjct: 8   MAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLPADECRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           A++DF+F++   VP+SRIFF+AWSPDT++VRSKMIYASSKD+F+RELDGIQ+ELQATDP+
Sbjct: 68  AIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMDLDVFKSRA 132
           EMDLDVFKSRA
Sbjct: 128 EMDLDVFKSRA 138

[Close]
BLAST of CsaV3_1G033580 vs. TAIR10
Match: AT3G46010.2 (actin depolymerizing factor 1)

HSP 1 Score: 223.4 bits (568), Expect = 8.3e-59
Identity = 104/131 (79.39%), Postives = 121/131 (92.37%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKL+FLELK KRT+R+IVYKIEEKQKQV VEK+G+P Q+YE+F ACLPADECRY
Sbjct: 19  MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRY 78

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           A+YDF+F+T  N  KS+IFFIAW PD +KVRSKMIYASSKD+F+RELDGIQ+ELQATDP+
Sbjct: 79  AIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 138

Query: 121 EMDLDVFKSRA 132
           EMDLDVF+SRA
Sbjct: 139 EMDLDVFRSRA 149

[Close]
BLAST of CsaV3_1G033580 vs. TAIR10
Match: AT5G59890.1 (actin depolymerizing factor 4)

HSP 1 Score: 216.9 bits (551), Expect = 7.8e-57
Identity = 103/130 (79.23%), Postives = 117/130 (90.00%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKL+FLELK KRT+R+IVYKIEEKQKQV VEK+GEP  +YEDF A LPADECRY
Sbjct: 8   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           A+YDF+F+T  N  KS+IFFIAW PD +KVRSKMIYASSKD+F+RELDGIQ+ELQATDP+
Sbjct: 68  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMDLDVFKSR 131
           EMDLDV KSR
Sbjct: 128 EMDLDVLKSR 137

[Close]
BLAST of CsaV3_1G033580 vs. TAIR10
Match: AT3G46000.1 (actin depolymerizing factor 2)

HSP 1 Score: 209.9 bits (533), Expect = 9.5e-55
Identity = 101/130 (77.69%), Postives = 115/130 (88.46%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKLKF+ELK KRT+R IVYKIE+  KQV VEKLGEP QSY+DF A LPAD+CRY
Sbjct: 8   MAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASLPADDCRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
            +YDF+F+T  N  KS+IFFIAWSPDT+KVR KMIYASSKD+F+RELDGIQ+ELQATDP+
Sbjct: 68  CIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMDLDVFKSR 131
           EM LDVFKSR
Sbjct: 128 EMGLDVFKSR 135

[Close]
BLAST of CsaV3_1G033580 vs. TAIR10
Match: AT4G00680.1 (actin depolymerizing factor 8)

HSP 1 Score: 203.8 bits (517), Expect = 6.8e-53
Identity = 92/130 (70.77%), Postives = 115/130 (88.46%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           M V+D+CK+KFLELK KRTYR+IV+KI+EK +QV +EKLG P ++Y+DFT+ +P DECRY
Sbjct: 8   MHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           AVYDF+F TE N  KS+IFFIAWSPDTS+VRSKM+YASSKD+F+RE++GIQ+ELQATDPS
Sbjct: 68  AVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPS 127

Query: 121 EMDLDVFKSR 131
           EM LD+ K R
Sbjct: 128 EMSLDIIKGR 137

[Close]
BLAST of CsaV3_1G033580 vs. Swiss-Prot
Match: sp|Q9FVI1|ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 2.7e-59
Identity = 109/131 (83.21%), Postives = 123/131 (93.89%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKLKFLELK KRTYR+I+YKIEEKQK+V VEKLGEP +SYEDFTA LPADECRY
Sbjct: 8   MAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGLPADECRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           AVYDF+F+T+ N  KSRIFFIAWSPDT++VRSKMIYASSKD+F+RELDGIQ+ELQATDP+
Sbjct: 68  AVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMDLDVFKSRA 132
           EM LDVF+SRA
Sbjct: 128 EMGLDVFRSRA 138

[Close]
BLAST of CsaV3_1G033580 vs. Swiss-Prot
Match: sp|Q9ZSK4|ADF3_ARATH (Actin-depolymerizing factor 3 OS=Arabidopsis thaliana OX=3702 GN=ADF3 PE=1 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 5.1e-58
Identity = 103/131 (78.63%), Postives = 123/131 (93.89%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKLKF+ELKTKRT+R+I+YKIEE QKQV VEK+GEPGQ++ED  A LPADECRY
Sbjct: 8   MAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLPADECRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           A++DF+F++   VP+SRIFF+AWSPDT++VRSKMIYASSKD+F+RELDGIQ+ELQATDP+
Sbjct: 68  AIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMDLDVFKSRA 132
           EMDLDVFKSRA
Sbjct: 128 EMDLDVFKSRA 138

[Close]
BLAST of CsaV3_1G033580 vs. Swiss-Prot
Match: sp|Q39250|ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 1.5e-57
Identity = 104/131 (79.39%), Postives = 121/131 (92.37%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKL+FLELK KRT+R+IVYKIEEKQKQV VEK+G+P Q+YE+F ACLPADECRY
Sbjct: 8   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           A+YDF+F+T  N  KS+IFFIAW PD +KVRSKMIYASSKD+F+RELDGIQ+ELQATDP+
Sbjct: 68  AIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMDLDVFKSRA 132
           EMDLDVF+SRA
Sbjct: 128 EMDLDVFRSRA 138

[Close]
BLAST of CsaV3_1G033580 vs. Swiss-Prot
Match: sp|Q9ZSK3|ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 216.9 bits (551), Expect = 1.4e-55
Identity = 103/130 (79.23%), Postives = 117/130 (90.00%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKL+FLELK KRT+R+IVYKIEEKQKQV VEK+GEP  +YEDF A LPADECRY
Sbjct: 8   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           A+YDF+F+T  N  KS+IFFIAW PD +KVRSKMIYASSKD+F+RELDGIQ+ELQATDP+
Sbjct: 68  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 127

Query: 121 EMDLDVFKSR 131
           EMDLDV KSR
Sbjct: 128 EMDLDVLKSR 137

[Close]
BLAST of CsaV3_1G033580 vs. Swiss-Prot
Match: sp|Q9FVI2|ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 6.9e-55
Identity = 102/131 (77.86%), Postives = 117/131 (89.31%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKL+FLELK KRT+R+IVYKIEEKQKQV VEK+GEP +SYEDF A LP +ECRY
Sbjct: 8   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPENECRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           AVYDF+F+T  N  KSRIFFIAW PDT++VRSKMIYASSKD+F+RELDGIQ+ELQA DP+
Sbjct: 68  AVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPT 127

Query: 121 EMDLDVFKSRA 132
           EM LDV +SRA
Sbjct: 128 EMGLDVIQSRA 138

[Close]
BLAST of CsaV3_1G033580 vs. TrEMBL
Match: tr|A0A0A0LV73|A0A0A0LV73_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G480180 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 4.8e-69
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY
Sbjct: 8   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS
Sbjct: 68  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 127

Query: 121 EMDLDVFKSRAK 133
           EMDLDVFKSRAK
Sbjct: 128 EMDLDVFKSRAK 139

[Close]
BLAST of CsaV3_1G033580 vs. TrEMBL
Match: tr|A0A1S3C732|A0A1S3C732_CUCME (actin-depolymerizing factor 2 OS=Cucumis melo OX=3656 GN=LOC103497215 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.1e-68
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKLKFLELKTKRTYR+IVYKIEEKQKQVTVEK+GEPGQSYEDFTACLPADECRY
Sbjct: 8   MAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVTVEKVGEPGQSYEDFTACLPADECRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS
Sbjct: 68  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 127

Query: 121 EMDLDVFKSRAK 133
           EMDLDVFKSRAK
Sbjct: 128 EMDLDVFKSRAK 139

[Close]
BLAST of CsaV3_1G033580 vs. TrEMBL
Match: tr|E5GCP0|E5GCP0_CUCME (Actin depolymerizing factor-like protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.1e-68
Identity = 130/132 (98.48%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKLKFLELKTKRTYR+IVYKIEEKQKQVTVEK+GEPGQSYEDFTACLPADECRY
Sbjct: 8   MAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVTVEKVGEPGQSYEDFTACLPADECRY 67

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS
Sbjct: 68  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 127

Query: 121 EMDLDVFKSRAK 133
           EMDLDVFKSRAK
Sbjct: 128 EMDLDVFKSRAK 139

[Close]
BLAST of CsaV3_1G033580 vs. TrEMBL
Match: tr|A0A2R6PWW6|A0A2R6PWW6_ACTCH (Actin-depolymerizing factor 2 like (Fragment) OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc24862 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 3.7e-61
Identity = 117/131 (89.31%), Postives = 125/131 (95.42%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKLKFLELK KRTYR+IVYKIEEKQKQV VEK+GEP QSYEDFTACLPADECRY
Sbjct: 7   MAVHDDCKLKFLELKAKRTYRFIVYKIEEKQKQVVVEKVGEPTQSYEDFTACLPADECRY 66

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           AVYDF+FLT  NVPKSRIFF+AWSPDTS+VR+KMIYASSKD+F+RELDGIQIELQATD S
Sbjct: 67  AVYDFDFLTAENVPKSRIFFVAWSPDTSRVRNKMIYASSKDRFKRELDGIQIELQATDAS 126

Query: 121 EMDLDVFKSRA 132
           EMDLDVFKSRA
Sbjct: 127 EMDLDVFKSRA 137

[Close]
BLAST of CsaV3_1G033580 vs. TrEMBL
Match: tr|A0A2R6RY63|A0A2R6RY63_ACTCH (Actin-depolymerizing factor 2 like (Fragment) OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc02175 PE=3 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.4e-60
Identity = 116/131 (88.55%), Postives = 125/131 (95.42%), Query Frame = 0 

Query: 1   MAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVTVEKLGEPGQSYEDFTACLPADECRY 60
           MAVHDDCKLKFLELK KRTYR+IVYKIEEKQKQV VEK+GEP QSYEDFTACLPA+ECRY
Sbjct: 7   MAVHDDCKLKFLELKAKRTYRFIVYKIEEKQKQVVVEKVGEPTQSYEDFTACLPANECRY 66

Query: 61  AVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 120
           AVYDF+FLT  NVPKSRIFF+AWSPDTS+VR+KMIYASSKD+F+RELDGIQIELQATD S
Sbjct: 67  AVYDFDFLTAENVPKSRIFFVAWSPDTSRVRNKMIYASSKDRFKRELDGIQIELQATDAS 126

Query: 121 EMDLDVFKSRA 132
           EMDLDVFKSRA
Sbjct: 127 EMDLDVFKSRA 137

The following BLAST results are available for this feature:
BLAST of CsaV3_1G033580 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149045.17.3e-69100.00PREDICTED: actin-depolymerizing factor 2 [Cucumis sativus] >KGN65663.1 hypotheti... [more]
XP_008457551.14.7e-6898.48PREDICTED: actin-depolymerizing factor 2 [Cucumis melo] >ADN34239.1 actin depoly... [more]
XP_022964654.14.1e-6493.94actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_022970372.1 actin-de... [more]
XP_022156171.14.6e-6393.18actin-depolymerizing factor 2 [Momordica charantia][more]
XP_019177333.13.9e-6290.08PREDICTED: actin-depolymerizing factor 2-like [Ipomoea nil][more]
BLAST of CsaV3_1G033580 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G59880.12.9e-5978.63actin depolymerizing factor 3[more]
AT3G46010.28.3e-5979.39actin depolymerizing factor 1[more]
AT5G59890.17.8e-5779.23actin depolymerizing factor 4[more]
AT3G46000.19.5e-5577.69actin depolymerizing factor 2[more]
AT4G00680.16.8e-5370.77actin depolymerizing factor 8[more]
BLAST of CsaV3_1G033580 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FVI1|ADF2_PETHY2.7e-5983.21Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1[more]
sp|Q9ZSK4|ADF3_ARATH5.1e-5878.63Actin-depolymerizing factor 3 OS=Arabidopsis thaliana OX=3702 GN=ADF3 PE=1 SV=1[more]
sp|Q39250|ADF1_ARATH1.5e-5779.39Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1[more]
sp|Q9ZSK3|ADF4_ARATH1.4e-5579.23Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2[more]
sp|Q9FVI2|ADF1_PETHY6.9e-5577.86Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1[more]
BLAST of CsaV3_1G033580 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LV73|A0A0A0LV73_CUCSA4.8e-69100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G480180 PE=3 SV=1[more]
tr|A0A1S3C732|A0A1S3C732_CUCME3.1e-6898.48actin-depolymerizing factor 2 OS=Cucumis melo OX=3656 GN=LOC103497215 PE=3 SV=1[more]
tr|E5GCP0|E5GCP0_CUCME3.1e-6898.48Actin depolymerizing factor-like protein OS=Cucumis melo subsp. melo OX=412675 P... [more]
tr|A0A2R6PWW6|A0A2R6PWW6_ACTCH3.7e-6189.31Actin-depolymerizing factor 2 like (Fragment) OS=Actinidia chinensis var. chinen... [more]
tr|A0A2R6RY63|A0A2R6RY63_ACTCH1.4e-6088.55Actin-depolymerizing factor 2 like (Fragment) OS=Actinidia chinensis var. chinen... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0030042actin filament depolymerization
Vocabulary: Molecular Function
TermDefinition
GO:0003779actin binding
Vocabulary: INTERPRO
TermDefinition
IPR017904ADF/Cofilin
IPR029006ADF-H/Gelsolin-like_dom_sf
IPR002108ADF-H
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005622 intracellular
molecular_function GO:0003779 actin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G033580.1CsaV3_1G033580.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 5..132
e-value: 4.4E-58
score: 208.9
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 7..129
e-value: 4.6E-38
score: 130.1
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 1..132
score: 38.164
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3DG3DSA:3.40.20.10coord: 1..132
e-value: 5.3E-48
score: 164.0
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 1..131
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 1..131
e-value: 2.06457E-61
score: 186.223
NoneNo IPR availablePANTHERPTHR11913:SF50SUBFAMILY NOT NAMEDcoord: 1..131
NoneNo IPR availableSUPERFAMILYSSF55753Actin depolymerizing proteinscoord: 1..130

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G033580CSPI01G22410Wild cucumber (PI 183967)cpicucB000
CsaV3_1G033580Cucsa.213400Cucumber (Gy14) v1cgycucB333
CsaV3_1G033580CmaCh13G001620Cucurbita maxima (Rimu)cmacucB0250
CsaV3_1G033580CmaCh01G005590Cucurbita maxima (Rimu)cmacucB0512
CsaV3_1G033580CmoCh13G001650Cucurbita moschata (Rifu)cmocucB0236
CsaV3_1G033580CmoCh01G005850Cucurbita moschata (Rifu)cmocucB0500
CsaV3_1G033580Cp4.1LG20g08850Cucurbita pepo (Zucchini)cpecucB0625
CsaV3_1G033580Cp4.1LG02g12900Cucurbita pepo (Zucchini)cpecucB0664
CsaV3_1G033580CsGy1G021970Cucumber (Gy14) v2cgybcucB001
CsaV3_1G033580Carg12331Silver-seed gourdcarcucB0472
CsaV3_1G033580Carg21036Silver-seed gourdcarcucB0765
CsaV3_1G033580Cla008289Watermelon (97103) v1cucwmB026
CsaV3_1G033580MELO3C020711Melon (DHL92) v3.5.1cucmeB025
CsaV3_1G033580ClCG03G001980Watermelon (Charleston Gray)cucwcgB051
CsaV3_1G033580Lsi02G014030Bottle gourd (USVL1VR-Ls)cuclsiB031
CsaV3_1G033580MELO3C020711.2Melon (DHL92) v3.6.1cucmedB023
CsaV3_1G033580Cla97C03G052990Watermelon (97103) v2cucwmbB042
CsaV3_1G033580Bhi08G000324Wax gourdcucwgoB044
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G033580Silver-seed gourdcarcucB0336
CsaV3_1G033580Cucurbita maxima (Rimu)cmacucB0648
CsaV3_1G033580Cucurbita moschata (Rifu)cmocucB0633
CsaV3_1G033580Cucurbita moschata (Rifu)cmocucB0677
CsaV3_1G033580Cucurbita pepo (Zucchini)cpecucB0331
CsaV3_1G033580Cucurbita pepo (Zucchini)cpecucB0875
CsaV3_1G033580Wax gourdcucwgoB021